TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2550132.2.1
(603 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV265001.1|CV265001 WS02026.B21_B01 PTxN-IB-N-A-11 Popul... 185 1e-057
gb|DT523819.1|DT523819 WS02040.B21_L16 PTxN-IB-N-A-11 Popul... 185 1e-057
gb|CV276058.1|CV276058 WS0178.B21.1_H22 PTxD-NR-A-8 Populus... 183 4e-057
gb|CA926209.1|CA926209 MTU6CR.P11.C07 Aspen root cDNA Libra... 184 6e-053
gb|CB240336.1|CB240336 PopSC00315 Poplar SC cDNA library Po... 143 3e-045
gb|AJ774952.1|AJ774952 AJ774952 Populus euphratica shoot 3-... 174 5e-043
gb|CV258894.1|CV258894 WS0201.B21_M19 PTxN-IB-N-A-11 Populu... 160 2e-042
gb|CX656419.1|CX656419 PO01001D08 Poplar SC cDNA library Po... 158 8e-042
gb|DN488090.1|DN488090 R032A09.3pR Populus root cDNA librar... 156 2e-041
gb|CV228282.1|CV228282 WS0191.B21_J20 PT-DX-N-A-10 Populus ... 156 5e-040
gb|CV240954.1|CV240954 WS02510.B21_N03 PT-MB-N-A-15 Populus... 160 1e-038
gb|CX173811.1|CX173811 C01_69-21_05.ab1 leaf inoculated wit... 160 1e-038
gb|DN497770.1|DN497770 R032A09.5pR Populus root cDNA librar... 145 2e-037
gb|BU832899.1|BU832899 T039E09 Populus apical shoot cDNA li... 126 2e-037
gb|CA933918.1|CA933918 MTU3TS.P14.D04 Aspen stem cDNA Libra... 152 2e-036
gb|CA934253.1|CA934253 MTU3TS.P5.B08 Aspen stem cDNA Librar... 152 2e-036
gb|CK089237.1|CK089237 B006P10.3pR Hybrid aspen plasmid lib... 152 2e-036
gb|CX658837.1|CX658837 PO01022H11 Poplar SC cDNA library Po... 150 8e-036
gb|CA927044.1|CA927044 MTU6CR.P4.C03 Aspen root cDNA Librar... 149 1e-035
gb|BP935724.1|BP935724 BP935724 full-length enriched poplar... 148 3e-035
gb|DT485951.1|DT485951 WS02529.B21_J22 PT-MB-N-A-15 Populus... 147 5e-035
gb|CA926423.1|CA926423 MTU6CR.P14.H04 Aspen root cDNA Libra... 145 2e-034
gb|CN524579.1|CN524579 GQ015M13.T3_C09 GQ015 Populus tricho... 143 9e-034
gb|DT484480.1|DT484480 WS02525.B21_I14 PT-MB-N-A-15 Populus... 125 3e-032
gb|CA932458.1|CA932458 MTU5CS.P13.C03 Aspen stem cDNA Libra... 138 4e-032
gb|DR448910.1|DR448910 qi3 Populus simonii Carr Populus sim... 109 7e-032
gb|DT516698.1|DT516698 WS02432.B21_C13 PTxD-ICC-N-A-14 Popu... 86 2e-029
gb|CN520678.1|CN520678 GQ0105.B3_G08 GQ010 Populus trichoca... 86 2e-029
gb|CV252598.1|CV252598 PX0015.B21_F22 PT-X-FL-A-1 Populus t... 126 1e-028
gb|DT479341.1|DT479341 WS02525.BR_I14 PT-MB-N-A-15 Populus ... 111 3e-028
gb|CX660295.1|CX660295 PO01011F02 Poplar SC cDNA library Po... 121 4e-027
gb|CX167639.1|CX167639 F08_69-6_12.ab1 leaf inoculated with... 81 1e-026
gb|BU897901.1|BU897901 X071F05 Populus wood cDNA library Po... 61 8e-026
gb|CX172457.1|CX172457 C02_69-2_06.ab1 leaf inoculated with... 104 1e-025
gb|CK102426.1|CK102426 G077P24.5pR Populus tension wood cDN... 86 4e-025
gb|CV266581.1|CV266581 WS0203.B21_G18 PTxN-IB-N-A-11 Populu... 112 2e-024
gb|CV269512.1|CV269512 WS0208.B21_H09 PTxN-IB-N-A-11 Populu... 112 2e-024
gb|CF234427.1|CF234427 Ptajxojxo2E10E1010 Poplar cDNA libra... 86 6e-024
gb|BU865374.1|BU865374 S052H04 Populus imbibed seed cDNA li... 86 1e-023
gb|CX657151.1|CX657151 PO02030H12 Poplar SC cDNA library Po... 108 3e-023
gb|CF233934.1|CF233934 PtaJXO0029D1D0107 Poplar cDNA librar... 95 4e-023
gb|DT479200.1|DT479200 WS02525.BR_A24 PT-MB-N-A-15 Populus ... 81 1e-022
gb|DT484312.1|DT484312 WS02525.B21_A24 PT-MB-N-A-15 Populus... 81 1e-022
gb|CK088015.1|CK088015 A031P29.3pR Hybrid aspen plasmid lib... 80 2e-022
gb|CV255453.1|CV255453 WS02414.B21_A22 PTxD-ICC-N-A-14 Popu... 80 2e-022
gb|DT508385.1|DT508385 WS02420.BR_N08 PTxD-ICC-N-A-14 Popul... 80 2e-022
gb|DT512995.1|DT512995 WS02420.B21_N08 PTxD-ICC-N-A-14 Popu... 80 2e-022
gb|BU862883.1|BU862883 S021B03 Populus imbibed seed cDNA li... 86 2e-021
gb|BU813476.1|BU813476 N010H08 Populus bark cDNA library Po... 101 3e-021
gb|DN485521.1|DN485521 N010H08.3pR Populus bark cDNA librar... 101 3e-021
gb|DN495006.1|DN495006 N010H08.5pR Populus bark cDNA librar... 101 3e-021
gb|BI128690.1|BI128690 G080P13Y Populus cambium cDNA librar... 100 6e-021
>gb|CV265001.1|CV265001 WS02026.B21_B01 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02026_B01 3', mRNA sequence
Length = 907
Score = 185 bits (398), Expect(2) = 1e-057
Identities = 76/126 (60%), Positives = 94/126 (74%)
Frame = -1 / -1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGY+IEPTVFT+VKEDM+IA +EIFGPVM LMKFK ++EAI +AN+T+YGL AG+VT++L
Sbjct: 634 KGYFIEPTVFTDVKEDMMIATDEIFGPVMSLMKFKTIDEAIKKANNTKYGLAAGIVTKNL 455
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCYFA +DC +GG KMSGFG+ GM AL K+L VKSVVTP+
Sbjct: 454 DVANTVSRSIRAGTIWINCYFAFDNDCSYGGYKMSGFGRHLGMEALHKFLQVKSVVTPIY 275
Query: 111 ASPWI* 94
SPW+*
Sbjct: 274 NSPWL* 257
Score = 149 bits (320), Expect(2) = 3e-040
Identities = 77/124 (62%), Positives = 82/124 (66%)
Frame = +2 / +3
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE GVTTDLT R L A +P LP PLIL PP QSL AK*Q PAR DL T
Sbjct: 264 QGELYMGVTTDLT*RNL*RASIPRCLPNPLILYPPYEQSLSNAK*QLIQMVPARMDLDTV 443
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
ATS+ VT PA PY V FA IASS LNF+ +TGPKISS A+IMSSLT VKTVGSM
Sbjct: 444 LATSKFLVTIPAARPYFVLFAFLIASSIVLNFMSDITGPKISSVAIIMSSLTSVKTVGSM 623
Query: 461 **PF 472
PF
Sbjct: 624 KYPF 635
Score = 58.3 bits (121), Expect(2) = 1e-057
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = -1 / -1
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q++++LSYI HGKREGA+LLTGG+P G +G
Sbjct: 724 KQQFDKILSYIEHGKREGASLLTGGKPVGKKG 629
Score = 35.4 bits (71), Expect(2) = 3e-040
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +2 / +3
Query: 470 FPSGPHGLPPVKRVAPSRLPWPM*LRTLS 556
+P P GLPPV + APSR P M R LS
Sbjct: 627 YPFLPTGLPPVNKEAPSRFPCSMYERILS 713
>gb|DT523819.1|DT523819 WS02040.B21_L16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02040_L16 3', mRNA sequence
Length = 843
Score = 185 bits (398), Expect(2) = 1e-057
Identities = 76/126 (60%), Positives = 94/126 (74%)
Frame = -1 / -1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGY+IEPTVFT+VKEDM+IA +EIFGPVM LMKFK ++EAI +AN+T+YGL AG+VT++L
Sbjct: 552 KGYFIEPTVFTDVKEDMMIATDEIFGPVMSLMKFKTIDEAIKKANNTKYGLAAGIVTKNL 373
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCYFA +DC +GG KMSGFG+ GM AL K+L VKSVVTP+
Sbjct: 372 DVANTVSRSIRAGTIWINCYFAFDNDCSYGGYKMSGFGRHLGMEALHKFLQVKSVVTPIY 193
Query: 111 ASPWI* 94
SPW+*
Sbjct: 192 NSPWL* 175
Score = 149 bits (320), Expect(2) = 3e-040
Identities = 77/124 (62%), Positives = 82/124 (66%)
Frame = +2 / +2
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE GVTTDLT R L A +P LP PLIL PP QSL AK*Q PAR DL T
Sbjct: 182 QGELYMGVTTDLT*RNL*RASIPRCLPNPLILYPPYEQSLSNAK*QLIQMVPARMDLDTV 361
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
ATS+ VT PA PY V FA IASS LNF+ +TGPKISS A+IMSSLT VKTVGSM
Sbjct: 362 LATSKFLVTIPAARPYFVLFAFLIASSIVLNFMSDITGPKISSVAIIMSSLTSVKTVGSM 541
Query: 461 **PF 472
PF
Sbjct: 542 KYPF 553
Score = 58.3 bits (121), Expect(2) = 1e-057
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = -1 / -1
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q++++LSYI HGKREGA+LLTGG+P G +G
Sbjct: 642 KQQFDKILSYIEHGKREGASLLTGGKPVGKKG 547
Score = 35.4 bits (71), Expect(2) = 3e-040
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 470 FPSGPHGLPPVKRVAPSRLPWPM*LRTLS 556
+P P GLPPV + APSR P M R LS
Sbjct: 545 YPFLPTGLPPVNKEAPSRFPCSMYERILS 631
>gb|CV276058.1|CV276058 WS0178.B21.1_H22 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0178_H22 3', mRNA sequence
Length = 831
Score = 183 bits (394), Expect(2) = 4e-057
Identities = 75/126 (59%), Positives = 94/126 (74%)
Frame = -1 / -2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGY+IEPTVFT+VKEDM+IA +EIFGPVM LMKFK ++EAI +AN+T+YGL AG+VT++L
Sbjct: 659 KGYFIEPTVFTDVKEDMMIATDEIFGPVMSLMKFKTIDEAIKKANNTKYGLAAGIVTKNL 480
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCYFA +DC +GG KMSGFG+ G+ AL K+L VKSVVTP+
Sbjct: 479 DVANTVSRSIRAGTIWINCYFAFDNDCSYGGYKMSGFGRHLGIEALHKFLQVKSVVTPIY 300
Query: 111 ASPWI* 94
SPW+*
Sbjct: 299 NSPWL* 282
Score = 149 bits (320), Expect(2) = 3e-040
Identities = 77/124 (62%), Positives = 82/124 (66%)
Frame = +2 / +1
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE GVTTDLT R L A +P LP PLIL PP QSL AK*Q PAR DL T
Sbjct: 289 QGELYMGVTTDLT*RNL*RASIPRCLPNPLILYPPYEQSLSNAK*QLIQMVPARMDLDTV 468
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
ATS+ VT PA PY V FA IASS LNF+ +TGPKISS A+IMSSLT VKTVGSM
Sbjct: 469 LATSKFLVTIPAARPYFVLFAFLIASSIVLNFMSDITGPKISSVAIIMSSLTSVKTVGSM 648
Query: 461 **PF 472
PF
Sbjct: 649 KYPF 660
Score = 58.3 bits (121), Expect(2) = 4e-057
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = -1 / -2
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q++++LSYI HGKREGA+LLTGG+P G +G
Sbjct: 749 KQQFDKILSYIEHGKREGASLLTGGKPVGKKG 654
Score = 35.4 bits (71), Expect(2) = 3e-040
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +2 / +1
Query: 470 FPSGPHGLPPVKRVAPSRLPWPM*LRTLS 556
+P P GLPPV + APSR P M R LS
Sbjct: 652 YPFLPTGLPPVNKEAPSRFPCSMYERILS 738
>gb|CA926209.1|CA926209 MTU6CR.P11.C07 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 550
Score = 184 bits (397), Expect(2) = 6e-053
Identities = 75/132 (56%), Positives = 96/132 (72%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGY+IEPT+FT+VKEDM+IA +EIFGPVM LMKFK +EEAI +AN+T+YGL AG+VT++L
Sbjct: 61 KGYFIEPTIFTDVKEDMMIATDEIFGPVMSLMKFKTIEEAIKKANNTKYGLAAGIVTKNL 240
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCYFA DC +GG KMSGFG+ G+ AL K+L KSVVTP+
Sbjct: 241 DVANTVSRSIRAGTIWINCYFAFDHDCSYGGYKMSGFGRHLGIEALHKFLQAKSVVTPIY 420
Query: 111 ASPWI*FSLISG 76
SPW+* + ++G
Sbjct: 421 NSPWL*INKMNG 456
Score = 139 bits (299), Expect(2) = 2e-036
Identities = 74/124 (59%), Positives = 79/124 (63%)
Frame = +2 / -3
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE GVTTDL R L A +P LP PLIL PP QS AK*Q PAR DL T
Sbjct: 431 QGEL*MGVTTDLA*RNL*RASIPRCLPNPLILYPPYEQS*SNAK*QLIQMVPARMDLDTV 252
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
ATS+ VT PA PY V FA IASS LNF+ +TGPKISS A+IMSSLT VK VGSM
Sbjct: 251 LATSKFLVTIPAARPYFVLFAFLIASSIVLNFMSDITGPKISSVAIIMSSLTSVKIVGSM 72
Query: 461 **PF 472
PF
Sbjct: 71 KYPF 60
Score = 42.8 bits (87), Expect(2) = 6e-053
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -1 / +1
Query: 537 IGHGKREGATLLTGGRPCGPEG 472
I HGKREGA+LLTGG+P G +G
Sbjct: 1 IEHGKREGASLLTGGKPVGKKG 66
Score = 32.2 bits (64), Expect(2) = 2e-036
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2 / -3
Query: 470 FPSGPHGLPPVKRVAPSRLP 529
+P P GLPPV + APSR P
Sbjct: 68 YPFLPTGLPPVNKEAPSRFP 9
>gb|CB240336.1|CB240336 PopSC00315 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PopSC00315, mRNA sequence
Length = 444
Score = 143 bits (307), Expect(2) = 3e-045
Identities = 58/99 (58%), Positives = 72/99 (72%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGY+IEPTVFT+VKE+M+IA +EIFGPVM LMKFK ++EAI +AN+T+YGL AG+VT++L
Sbjct: 114 KGYFIEPTVFTDVKEEMMIATDEIFGPVMSLMKFKTIDEAIKKANNTKYGLAAGIVTKNL 293
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGK 175
D NCYFA DC +GG KMSGF K
Sbjct: 294 DVANTVSRSIRAGTIWINCYFAFDQDCSYGGYKMSGFWK 410
Score = 114 bits (243), Expect(2) = 1e-029
Identities = 59/96 (61%), Positives = 64/96 (66%)
Frame = +2 / -3
Query: 185 PLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRSRVTTPAPSPYRVSFALAIASST 364
PLIL PP QS AK*Q PAR DL T ATS+ VT PA PY V FA IASS
Sbjct: 400 PLILYPPYEQS*SNAK*QLIQMVPARMDLDTVLATSKFLVTIPAARPYFVLFAFLIASSI 221
Query: 365 GLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**PF 472
LNF+ +TGPKISS A+I+SSLT VKTVGSM PF
Sbjct: 220 VLNFMSDITGPKISSVAIIISSLTSVKTVGSMKYPF 113
Score = 58.3 bits (121), Expect(2) = 3e-045
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = -1 / +3
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q++++LSYI HGKREGA+LLTGG+P G +G
Sbjct: 24 KQQFDKILSYIEHGKREGASLLTGGKPVGKKG 119
Score = 35.4 bits (71), Expect(2) = 1e-029
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +2 / -3
Query: 470 FPSGPHGLPPVKRVAPSRLPWPM*LRTLS 556
+P P GLPPV + APSR P M R LS
Sbjct: 121 YPFLPTGLPPVSKEAPSRFPCSMYERILS 35
>gb|AJ774952.1|AJ774952 AJ774952 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300026B08F1, mRNA sequence
Length = 566
Score = 174 bits (374), Expect = 5e-043
Identities = 72/123 (58%), Positives = 90/123 (73%)
Frame = -1 / +3
Query: 462 YIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLDXX 283
+IEPTVFT+VK DM+IA +EIFGPVM LMKFK ++EAI +AN+T+YGL AG+VT++LD
Sbjct: 3 FIEPTVFTDVKADMMIATDEIFGPVMSLMKFKTIDEAIKKANNTKYGLAAGIVTKNLDVA 182
Query: 282 XXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASP 103
NCYFA +DC +GG KMSGFG+ GM AL K+L VKSVVTP+ SP
Sbjct: 183 NTVSRSIRAGTIWINCYFAFDNDCSYGGYKMSGFGRHLGMEALHKFLQVKSVVTPIYNSP 362
Query: 102 WI* 94
W+*
Sbjct: 363 WL* 371
Score = 145 bits (312), Expect = 2e-034
Identities = 74/120 (61%), Positives = 80/120 (66%)
Frame = +2 / -2
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE GVTTDLT R L A +P LP PLIL PP QSL AK*Q PAR DL T
Sbjct: 364 QGELYMGVTTDLT*RNL*RASIPRCLPNPLILYPPYEQSLSNAK*QLIQMVPARMDLDTV 185
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
ATS+ VT PA PY V FA IASS LNF+ +TGPKISS A+IMS+LT VKTVGSM
Sbjct: 184 LATSKFLVTIPAARPYFVLFAFLIASSIVLNFMSDITGPKISSVAIIMSALTSVKTVGSM 5
>gb|CV258894.1|CV258894 WS0201.B21_M19 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0201_M19 3', mRNA sequence
Length = 910
Score = 160 bits (343), Expect(2) = 2e-042
Identities = 64/130 (49%), Positives = 90/130 (69%)
Frame = -1 / -1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGY+I+PTVF+NV++DM+IAK+EIFGPV ++KFK ++E I RAN TRYGL AG+ T+++
Sbjct: 523 KGYFIQPTVFSNVQDDMLIAKDEIFGPVQSILKFKNIDEVIQRANTTRYGLAAGIFTKNV 344
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+++L YL VK+VVTPL+
Sbjct: 343 DTANTLSRALRVGSVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLK 164
Query: 111 ASPWI*FSLI 82
W+* LI
Sbjct: 163 NPAWL*ARLI 134
Score = 32.2 bits (64), Expect(2) = 2e-042
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1 / -1
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+E++L YI G ATL GG+ G +G
Sbjct: 607 QFEKILRYIKSGAESNATLECGGQRFGSKG 518
>gb|CX656419.1|CX656419 PO01001D08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01001D08 5', mRNA sequence
Length = 664
Score = 158 bits (340), Expect(2) = 8e-042
Identities = 63/128 (49%), Positives = 89/128 (69%)
Frame = -1 / -3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGY+I+PTVF+NV++DM+IAK+EIFGPV ++KFK ++E I RAN TRYGL AG+ T+++
Sbjct: 518 KGYFIQPTVFSNVQDDMLIAKDEIFGPVQSILKFKNIDEVIQRANTTRYGLAAGIFTKNV 339
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+++L YL VK+VVTPL+
Sbjct: 338 DTANTLSRALRVGSVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLK 159
Query: 111 ASPWI*FS 88
W+* S
Sbjct: 158 NPAWL*AS 135
Score = 31.8 bits (63), Expect(2) = 8e-042
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1 / -3
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+E++L YI G ATL GG+ G +G
Sbjct: 602 QFEKILRYIKSGVESNATLECGGQRFGSKG 513
>gb|DN488090.1|DN488090 R032A09.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone V017A09 3', mRNA sequence
Length = 713
Score = 156 bits (336), Expect(2) = 2e-041
Identities = 62/128 (48%), Positives = 90/128 (70%)
Frame = -1 / -3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGY+I+PTVF+NV++DM+IA++EIFGPV ++KFK V+E I R+N TRYGL AG+ T+++
Sbjct: 486 KGYFIQPTVFSNVEDDMLIAQDEIFGPVQSILKFKNVDEVIRRSNSTRYGLAAGIFTQNV 307
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+++L+ YL VK+VVTPL+
Sbjct: 306 DTANTLSRALRVGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLK 127
Query: 111 ASPWI*FS 88
W+* S
Sbjct: 126 NPAWL*SS 103
Score = 32.2 bits (64), Expect(2) = 2e-041
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1 / -3
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+E+VL YI G ATL GG+ G +G
Sbjct: 570 QFEKVLRYIRSGVESNATLECGGQRFGSKG 481
>gb|CV228282.1|CV228282 WS0191.B21_J20 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0191_J20 3', mRNA sequence
Length = 651
Score = 156 bits (335), Expect(2) = 5e-040
Identities = 61/126 (48%), Positives = 89/126 (70%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGY+I+PTVF+NV++DM+IA++EIFGPV ++KFK V+E I R+N TRYGL AG+ T+++
Sbjct: 132 KGYFIQPTVFSNVEDDMLIAQDEIFGPVQSILKFKNVDEVIRRSNSTRYGLAAGIFTKNV 311
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+++L+ YL VK+VVTPL+
Sbjct: 312 DTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLK 491
Query: 111 ASPWI* 94
W+*
Sbjct: 492 NPAWL* 509
Score = 28.1 bits (55), Expect(2) = 5e-040
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1 / +3
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q++ VL YI G ATL GG+ G +G
Sbjct: 48 QFQ*VLRYIRSGVESNATLECGGQRFGSKG 137
>gb|CV240954.1|CV240954 WS02510.B21_N03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02510_N03 3', mRNA sequence
Length = 726
Score = 160 bits (343), Expect = 1e-038
Identities = 64/130 (49%), Positives = 90/130 (69%)
Frame = -1 / -1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGY+I+PTVF+NV++DM+IAK+EIFGPV ++KFK ++E I RAN TRYGL AG+ T+++
Sbjct: 660 KGYFIQPTVFSNVQDDMLIAKDEIFGPVQSILKFKNIDEVIQRANTTRYGLAAGIFTKNV 481
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+++L YL VK+VVTPL+
Sbjct: 480 DTANTLSRALRVGSVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLK 301
Query: 111 ASPWI*FSLI 82
W+* LI
Sbjct: 300 NPAWL*ARLI 271
Score = 101 bits (215), Expect = 4e-021
Identities = 58/118 (49%), Positives = 64/118 (54%)
Frame = +2 / +2
Query: 116 SGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSR 295
+GVTT T + L MP SLP PLIL PP G + Q THT P A S
Sbjct: 305 NGVTTAFTCK*LWRL*MPFSLPIPLIL*PPNGIAASKTSKQLTHTLPTLNARDKVLAVST 484
Query: 296 SRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V PA P RV FAL I SS LNF TGPKISSFA+ +SS T KTVG + *P
Sbjct: 485 FLVKIPAARP*RVVFALCITSSIFLNFKMDCTGPKISSFAINISSCTFEKTVGWIK*P 658
>gb|CX173811.1|CX173811 C01_69-21_05.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 579
Score = 160 bits (343), Expect = 1e-038
Identities = 64/130 (49%), Positives = 90/130 (69%)
Frame = -1 / -1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGY+I+PTVF+NV++DM+IAK+EIFGPV ++KFK ++E I RAN TRYGL AG+ T+++
Sbjct: 537 KGYFIQPTVFSNVQDDMLIAKDEIFGPVQSILKFKNIDEVIQRANTTRYGLAAGIFTKNV 358
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+++L YL VK+VVTPL+
Sbjct: 357 DTANTLSRALRVGSVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLK 178
Query: 111 ASPWI*FSLI 82
W+* LI
Sbjct: 177 NPAWL*ARLI 148
>gb|DN497770.1|DN497770 R032A09.5pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone V017A09 5', mRNA sequence
Length = 705
Score = 145 bits (311), Expect(2) = 2e-037
Identities = 58/120 (48%), Positives = 84/120 (70%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGY+I+PTV +NV++DM+IA++EIFGPV + KFK V+E I R+N TRYGL AG+ T+++
Sbjct: 230 KGYFIQPTVCSNVEDDMLIAQDEIFGPVHSIWKFKNVDEVIRRSNSTRYGLAAGIFTQNV 409
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+++L+ YL VK+VVTPL+
Sbjct: 410 DTANTLSRALRVGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLK 589
Score = 30.4 bits (60), Expect(2) = 2e-037
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1 / +2
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
++E+VL YI G ATL GG+ G +G
Sbjct: 146 RFEKVLMYIRSGVESNATLECGGQRFGSKG 235
>gb|BU832899.1|BU832899 T039E09 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 532
Score = 126 bits (269), Expect(3) = 2e-037
Identities = 50/105 (47%), Positives = 69/105 (65%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGY+I+PTVF+NV++DM+IAK+EIFGPV ++KFK ++E I RAN TRYGL AG+ T+++
Sbjct: 97 KGYFIQPTVFSNVQDDMLIAKDEIFGPVQSILKFKNIDEVIQRANTTRYGLAAGIFTKNV 276
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHA 157
D NC+ + PFGG KMSG G++ A
Sbjct: 277 DTANTLSRALRVGSVWVNCFDVFDAAIPFGGYKMSGIGRERASTA 411
Score = 35.9 bits (72), Expect(3) = 2e-037
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = -1 / +3
Query: 171 EGMHALDKYLAVKSVVTPLRASPWI*FS 88
+G+++L YL VK+VVTPL+ W+* S
Sbjct: 396 KGIYSLHNYLQVKAVVTPLKNPAWL*AS 479
Score = 31.8 bits (63), Expect(3) = 2e-037
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1 / +1
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+E++L YI G ATL GG+ G +G
Sbjct: 13 QFEKILRYIKSGVESNATLECGGQRFGSKG 102
>gb|CA933918.1|CA933918 MTU3TS.P14.D04 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 537
Score = 152 bits (326), Expect = 2e-036
Identities = 63/128 (49%), Positives = 85/128 (66%)
Frame = -1 / -2
Query: 468 GYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLD 289
GYYI+PTVF++V++DM+IAKEEIFGPV + KFK ++E I R+N TRYGL AG+ T +LD
Sbjct: 395 GYYIQPTVFSDVQDDMLIAKEEIFGPVQSIFKFKDLDEVIQRSNGTRYGLAAGIFTHNLD 216
Query: 288 XXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRA 109
NCY + PFGG KMSG G+++G+++L YL VK+VVT L+
Sbjct: 215 TANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSLSNYLQVKAVVTSLKN 36
Query: 108 SPWI*FSL 85
W+* L
Sbjct: 35 PAWL*VPL 12
>gb|CA934253.1|CA934253 MTU3TS.P5.B08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 537
Score = 152 bits (326), Expect = 2e-036
Identities = 63/128 (49%), Positives = 85/128 (66%)
Frame = -1 / +2
Query: 468 GYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLD 289
GYYI+PTVF++V++DM+IAKEEIFGPV + KFK ++E I R+N TRYGL AG+ T +LD
Sbjct: 143 GYYIQPTVFSDVQDDMLIAKEEIFGPVQSIFKFKDLDEVIQRSNSTRYGLAAGIFTHNLD 322
Query: 288 XXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRA 109
NCY + PFGG KMSG G+++G+++L YL VK+VVT L+
Sbjct: 323 TANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSLSNYLQVKAVVTSLKN 502
Query: 108 SPWI*FSL 85
W+* L
Sbjct: 503 PAWL*VLL 526
>gb|CK089237.1|CK089237 B006P10.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B006P10 3', mRNA sequence
Length = 655
Score = 152 bits (326), Expect = 2e-036
Identities = 63/128 (49%), Positives = 85/128 (66%)
Frame = -1 / -2
Query: 468 GYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLD 289
GYYI+PTVF++V++DM+IAKEEIFGPV + KFK ++E I R+N TRYGL AG+ T +LD
Sbjct: 561 GYYIQPTVFSDVQDDMLIAKEEIFGPVQSIFKFKDLDEVIQRSNSTRYGLAAGIFTHNLD 382
Query: 288 XXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRA 109
NCY + PFGG KMSG G+++G+++L YL VK+VVT L+
Sbjct: 381 TANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSLSNYLQVKAVVTSLKN 202
Query: 108 SPWI*FSL 85
W+* L
Sbjct: 201 PAWL*VLL 178
>gb|CX658837.1|CX658837 PO01022H11 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01022H11 5', mRNA sequence
Length = 509
Score = 150 bits (322), Expect = 8e-036
Identities = 60/125 (48%), Positives = 86/125 (68%)
Frame = -1 / +2
Query: 462 YIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLDXX 283
+I+PTVF+NV++DM+IAK+EIFGPV ++KFK ++E I RAN TRYGL AG+ T+++D
Sbjct: 2 FIQPTVFSNVQDDMLIAKDEIFGPVQSILKFKNIDEVIQRANTTRYGLAAGIFTKNVDTA 181
Query: 282 XXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASP 103
NC+ + PFGG KMSG G+++G+++L YL VK+VVTPL+
Sbjct: 182 NTLSRALRVGSVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLKNPA 361
Query: 102 WI*FS 88
W+* S
Sbjct: 362 WL*AS 376
>gb|CA927044.1|CA927044 MTU6CR.P4.C03 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 537
Score = 149 bits (321), Expect = 1e-035
Identities = 61/125 (48%), Positives = 84/125 (67%)
Frame = -1 / +2
Query: 468 GYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLD 289
GYYI+PTVF++V++DM+IAKEEIFGPV + KFK ++E I R++ TRYGL AG+ T +LD
Sbjct: 143 GYYIQPTVFSDVQDDMLIAKEEIFGPVQSIFKFKDLDEVIQRSDSTRYGLAAGIFTHNLD 322
Query: 288 XXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRA 109
NCY + PFGG KMSG G+++G+++L YL VK+VVT L+
Sbjct: 323 TANTLSRALKVGTVWINCYDVFDATIPFGGYKMSGNGREKGIYSLSNYLQVKAVVTSLKN 502
Query: 108 SPWI* 94
W+*
Sbjct: 503 PAWL* 517
>gb|BP935724.1|BP935724 BP935724 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-080_C06.r 3', mRNA sequence
Length = 652
Score = 148 bits (318), Expect = 3e-035
Identities = 61/128 (47%), Positives = 86/128 (67%)
Frame = -1 / -2
Query: 468 GYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLD 289
GYYI+PTVF++V++DM+IAKEEIFGPV + KFK ++E I R+N++RYGL AG+ T +LD
Sbjct: 582 GYYIQPTVFSDVQDDMLIAKEEIFGPVQSIFKFKDLDEVIQRSNNSRYGLAAGIFTHNLD 403
Query: 288 XXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRA 109
NCY + PFGG KMSG G+++G+++L+ Y VK+VVT L+
Sbjct: 402 TANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSLNNYSQVKAVVTSLKN 223
Query: 108 SPWI*FSL 85
W+* L
Sbjct: 222 PAWL*VLL 199
>gb|DT485951.1|DT485951 WS02529.B21_J22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02529_J22 3', mRNA sequence
Length = 797
Score = 147 bits (316), Expect = 5e-035
Identities = 61/128 (47%), Positives = 86/128 (67%)
Frame = -1 / -2
Query: 468 GYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLD 289
GYYI+PTVF++V++DM+IAKEEIFGPV + KFK ++E I R+N++RYGL AG+ T +LD
Sbjct: 685 GYYIQPTVFSDVQDDMLIAKEEIFGPV*SIFKFKDLDEVIQRSNNSRYGLAAGIFTHNLD 506
Query: 288 XXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRA 109
NCY + PFGG KMSG G+++G+++ + YL VK+VVT L+
Sbjct: 505 TANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSFNNYLQVKAVVTSLKN 326
Query: 108 SPWI*FSL 85
W+* L
Sbjct: 325 PAWL*VLL 302
>gb|CA926423.1|CA926423 MTU6CR.P14.H04 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 429
Score = 145 bits (312), Expect = 2e-034
Identities = 60/125 (48%), Positives = 83/125 (66%)
Frame = -1 / -2
Query: 468 GYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLD 289
GYYI+PTVF++V++D++IAKE IFGPV + KFK ++E I R+N TRYGL AG+ T +LD
Sbjct: 395 GYYIQPTVFSDVQDDVLIAKE*IFGPVQSIFKFKDLDEVIQRSNSTRYGLAAGIFTHNLD 216
Query: 288 XXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRA 109
NCY + PFGG KMSG G+++G+++L YL VK+VVT L+
Sbjct: 215 TANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSLSNYLQVKAVVTSLKN 36
Query: 108 SPWI* 94
W+*
Sbjct: 35 PAWL* 21
>gb|CN524579.1|CN524579 GQ015M13.T3_C09 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_C09 5', mRNA sequence
Length = 510
Score = 143 bits (307), Expect = 9e-034
Identities = 59/105 (56%), Positives = 74/105 (70%)
Frame = -1 / +3
Query: 408 EEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLDXXXXXXXXXXXXXXXXNCYF 229
+EIFGPVM LMKFK ++EAI +AN+T+YGL AG+VT++LD NCYF
Sbjct: 6 DEIFGPVMSLMKFKTIDEAIKKANNTKYGLAAGIVTKNLDVANTVSRSIRAGTIWINCYF 185
Query: 228 AMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPWI* 94
A +DC +GG KMSGFG+ GM AL K+L VKSVVTP+ SPW+*
Sbjct: 186 AFDNDCSYGGYKMSGFGRHLGMEALHKFLQVKSVVTPIYNSPWL* 320
Score = 119 bits (254), Expect = 2e-026
Identities = 61/103 (59%), Positives = 65/103 (63%)
Frame = +2 / -3
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE GVTTDLT R L A +P LP PLIL PP QSL AK*Q PAR DL T
Sbjct: 313 QGELYMGVTTDLT*RNL*RASIPRCLPNPLILYPPYEQSLSNAK*QLIQMVPARMDLDTV 134
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISS 409
ATS+ VT PA PY V FA IASS LNF+ +TGPKISS
Sbjct: 133 LATSKFLVTIPAARPYFVLFAFLIASSIVLNFMSDITGPKISS 5
>gb|DT484480.1|DT484480 WS02525.B21_I14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_I14 3', mRNA sequence
Length = 761
Score = 125 bits (267), Expect(2) = 3e-032
Identities = 51/114 (44%), Positives = 71/114 (62%)
Frame = -1 / -3
Query: 468 GYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLD 289
GY+IEPTVF+NV ++M I +EIFGPV ++KFK ++E I RAN+T YGL AG++T+++D
Sbjct: 498 GYFIEPTVFSNVTDNMSICTDEIFGPVQSILKFKTLDEIIERANNTSYGLAAGILTKNID 319
Query: 288 XXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSV 127
NCY A+ PFGG K SG G++ G L+ Y K+V
Sbjct: 318 NALVFSNAVEAGSVWVNCYLAITLQAPFGGYKQSGLGREGGEEVLELYQETKTV 157
Score = 92.7 bits (196), Expect(2) = 1e-021
Identities = 54/111 (48%), Positives = 57/111 (51%)
Frame = +2 / +2
Query: 128 TDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRSRVT 307
T L + Y S P S P P L PP G MAK*Q THT PA T A S V
Sbjct: 158 TVLVS*YSSRTSSPPSRPSPDCLYPPNGACNVMAK*QLTHTDPASTAFENTKALSMFLVK 337
Query: 308 TPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
PA P V A +I SS LNF TGPKISS M M S+T KTVGSM
Sbjct: 338 IPAAKP*EVLLARSIISSNVLNFKID*TGPKISSVQMDMLSVTFEKTVGSM 490
Score = 33.1 bits (66), Expect(2) = 3e-032
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1 / -3
Query: 558 YERVLSYIGHGKREGATLLTGGRPCGPEG 472
+ +V++YI GK+EGA L GG+ G G
Sbjct: 582 FNKVMNYIEAGKKEGAKLEAGGKRIGNVG 496
Score = 29.9 bits (59), Expect(2) = 1e-021
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2 / +2
Query: 470 FPSGPHGLPPVKRVAPSRLPWPM*LRTL 553
+P+ P LPP +APS LP +* TL
Sbjct: 494 YPTFPMRLPPASNLAPSFLPASI*FMTL 577
>gb|CA932458.1|CA932458 MTU5CS.P13.C03 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 536
Score = 138 bits (295), Expect = 4e-032
Identities = 61/128 (47%), Positives = 82/128 (64%)
Frame = -1 / +1
Query: 468 GYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLD 289
GYYI+ TVF++V +DM+IA EEIFGPV + KFK + E I R+N TRYGL AG+ T +LD
Sbjct: 142 GYYIQSTVFSDV*DDMLIA*EEIFGPVQSIFKFKDLYEVIQRSNSTRYGLTAGIFTHNLD 321
Query: 288 XXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRA 109
NCY + + PFGG KMSG G+++G+++L YL VK+VVT L+
Sbjct: 322 TANTLSRALKVGTVWINCYDVLYAAIPFGGYKMSGNGREKGIYSLINYLQVKAVVTSLKN 501
Query: 108 SPWI*FSL 85
W+* L
Sbjct: 502 PAWL*VLL 525
>gb|DR448910.1|DR448910 qi3 Populus simonii Carr Populus simonii cDNA similar to betaine
aldehyde dehydrogenase (BADH) of Populus simonii Carr,
mRNA sequence
Length = 1491
Score = 109 bits (233), Expect(2) = 7e-032
Identities = 45/93 (48%), Positives = 62/93 (66%)
Frame = -1 / +1
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEGKGYYIEPTVFTNVKEDMIIAKEEIFGPV 388
+ QYE+V+ YI K EGAT+L GG KGY+++PT+ T+VK M I EE+FGPV
Sbjct: 1003 RRQYEKVMKYISTAKEEGATILCGGARPEHLEKGYFVQPTIITDVKTSMQIWIEEVFGPV 1182
Query: 387 MCLMKFKPVEEAIARANDTRYGLGAGVVTRDLD 289
+ + F +EA+ ANDT YGL A V+++DLD
Sbjct: 1183 LWVKTFATEDEAVELANDTHYGLAAAVISKDLD 1281
Score = 47.3 bits (97), Expect(2) = 7e-032
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = -1 / +1
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG+K SGFG++ G LD YL VK V + + PW
Sbjct: 1360 PWGGKKRSGFGRELGERGLDIYLNVKQVTRYVSSEPW 1470
>gb|DT516698.1|DT516698 WS02432.B21_C13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02432_C13 3', mRNA sequence
Length = 914
Score = 86.3 bits (182), Expect(3) = 2e-029
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = -1 / -2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+++EPT+ T+V M I +EE+FGPV+C+ F +EAI ANDT YGLGA V++ DL
Sbjct: 703 KGFFVEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDTHYGLGAAVISNDL 524
Query: 291 D 289
+
Sbjct: 523 E 521
Score = 44.1 bits (90), Expect(3) = 2e-029
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -1 / -2
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G L+ YL+VK V + PW
Sbjct: 442 PWGGIKRSGFGRELGEWGLENYLSVKQVTQYISDEPW 332
Score = 35.9 bits (72), Expect(3) = 2e-029
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -1 / -2
Query: 561 QYERVLSYIGHGKREGATLLTGG 493
QYE+VL +I + EGAT+L+GG
Sbjct: 793 QYEKVLEFIATARSEGATILSGG 725
>gb|CN520678.1|CN520678 GQ0105.B3_G08 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_G08 5', mRNA sequence
Length = 757
Score = 86.3 bits (182), Expect(3) = 2e-029
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+++EPT+ T+V M I +EE+FGPV+C+ F +EAI ANDT YGLGA V++ DL
Sbjct: 293 KGFFVEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDTHYGLGAAVISNDL 472
Query: 291 D 289
+
Sbjct: 473 E 475
Score = 44.1 bits (90), Expect(3) = 2e-029
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -1 / +2
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G L+ YL+VK V + PW
Sbjct: 554 PWGGIKRSGFGRELGEWGLENYLSVKQVTQYISDEPW 664
Score = 35.9 bits (72), Expect(3) = 2e-029
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -1 / +2
Query: 561 QYERVLSYIGHGKREGATLLTGG 493
QYE+VL +I + EGAT+L+GG
Sbjct: 203 QYEKVLEFIATARSEGATILSGG 271
>gb|CV252598.1|CV252598 PX0015.B21_F22 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0015_F22 3', mRNA sequence
Length = 565
Score = 126 bits (270), Expect = 1e-028
Identities = 51/118 (43%), Positives = 77/118 (65%)
Frame = -1 / -2
Query: 447 VFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLDXXXXXXX 268
+F+ + M+IA++EIFGPV ++KFK V+E I R+N TRYGL AG+ T+++D
Sbjct: 501 LFSQMLRMMLIAQDEIFGPVQSILKFKNVDEVIRRSNSTRYGLAAGIFTKNVDTANTLSR 322
Query: 267 XXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPWI* 94
NC+ + PFGG KMSG G+++G+++L+ YL VK+VVTPL+ W+*
Sbjct: 321 ALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNPAWL* 148
>gb|DT479341.1|DT479341 WS02525.BR_I14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_I14 5', mRNA sequence
Length = 805
Score = 111 bits (237), Expect(2) = 3e-028
Identities = 45/95 (47%), Positives = 61/95 (64%)
Frame = -1 / +1
Query: 468 GYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLD 289
GY+IEPTVF+NV ++M I +EIFGPV ++KFK ++E I RAN+T YGL AG++T+++D
Sbjct: 520 GYFIEPTVFSNVTDNMSICTDEIFGPVQSILKFKTLDEIIERANNTSYGLAAGILTKNID 699
Query: 288 XXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSG 184
NCY A+ PFGG K SG
Sbjct: 700 NALVFSNAVEAGSVWVNCYLAITLQAPFGGYKQSG 804
Score = 33.1 bits (66), Expect(2) = 3e-028
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1 / +1
Query: 558 YERVLSYIGHGKREGATLLTGGRPCGPEG 472
+ +V++YI GK+EGA L GG+ G G
Sbjct: 436 FNKVMNYIEAGKKEGAKLEAGGKRIGNVG 522
>gb|CX660295.1|CX660295 PO01011F02 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01011F02 5', mRNA sequence
Length = 552
Score = 121 bits (259), Expect = 4e-027
Identities = 52/113 (46%), Positives = 70/113 (61%)
Frame = -1 / +2
Query: 423 MIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLDXXXXXXXXXXXXXXX 244
M+IAKEEIFGPV + KFK ++E I R+N +RYGL AG+ T +LD
Sbjct: 2 MLIAKEEIFGPVQSIFKFKDLDEVIQRSNSSRYGLAAGIFTHNLDTANTLSRALKVGTVW 181
Query: 243 XNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPWI*FSL 85
NCY + PFGG KMSG G+++G+++L YL VK+VVT L+ W+* L
Sbjct: 182 INCYDVFDAAIPFGGYKMSGNGREKGIYSLSNYLQVKAVVTSLKNPAWL*VLL 340
>gb|CX167639.1|CX167639 F08_69-6_12.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 625
Score = 81.3 bits (171), Expect(2) = 1e-026
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAI 349
KGY+IEPTVFT+VKEDM+IA +EIFGPVM LMKFK ++EAI
Sbjct: 500 KGYFIEPTVFTDVKEDMMIATDEIFGPVMSLMKFKTIDEAI 622
Score = 58.3 bits (121), Expect(2) = 1e-026
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = -1 / +2
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q++++LSYI HGKREGA+LLTGG+P G +G
Sbjct: 410 KQQFDKILSYIEHGKREGASLLTGGKPVGKKG 505
>gb|BU897901.1|BU897901 X071F05 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 709
Score = 60.6 bits (126), Expect(3) = 8e-026
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = -1 / +2
Query: 432 KEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
+ M I +EE+FGPV+C+ F +EAI ANDT YGLGA V++ D
Sbjct: 248 RPSMQIWREEVFGPVLCVKTFSTEDEAIDLANDTHYGLGAAVISDD 385
Score = 49.2 bits (101), Expect(3) = 8e-026
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = -1 / +1
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEGKGYYIEPTVFTNV 433
QY+++L +I K EGAT+L+GG KG+++EPT+ +V
Sbjct: 118 QYDKILKFIATAKSEGATILSGGDRPEHLNKGFFVEPTIIIDV 246
Score = 44.6 bits (91), Expect(3) = 8e-026
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -1 / +2
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G L+ YL+VK V + PW
Sbjct: 470 PWGGIKRSGFGRELGEWGLENYLSVKQVTQYISEEPW 580
>gb|CX172457.1|CX172457 C02_69-2_06.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 628
Score = 104 bits (221), Expect(2) = 1e-025
Identities = 38/61 (62%), Positives = 53/61 (86%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGY+I+PTVF+NV++DM+IAK+EIFGPV ++KFK ++E I RAN TRYGL AG+ T+++
Sbjct: 369 KGYFIQPTVFSNVQDDMLIAKDEIFGPVQSILKFKNIDEVIQRANTTRYGLAAGIFTKNV 548
Query: 291 D 289
D
Sbjct: 549 D 551
Score = 31.8 bits (63), Expect(2) = 1e-025
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1 / +3
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+E++L YI G ATL GG+ G +G
Sbjct: 285 QFEKILRYIKSGVESNATLECGGQRFGSKG 374
>gb|CK102426.1|CK102426 G077P24.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G077P24 5', mRNA sequence
Length = 501
Score = 86.3 bits (182), Expect(3) = 4e-025
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+++EPT+ T+V M I +EE+FGPV+C+ F +EAI ANDT YGLGA V++ DL
Sbjct: 98 KGFFVEPTIITDVTTSMQIWREEVFGPVLCVKTFSSEDEAIELANDTHYGLGAAVISNDL 277
Query: 291 D 289
+
Sbjct: 278 E 280
Score = 35.9 bits (72), Expect(3) = 4e-025
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -1 / +2
Query: 561 QYERVLSYIGHGKREGATLLTGG 493
QYE+VL +I + EGAT+L+GG
Sbjct: 8 QYEKVLEFIATARSEGATILSGG 76
Score = 29.9 bits (59), Expect(3) = 4e-025
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1 / +2
Query: 210 PFGGRKMSGFGKDEGMHALDKY 145
P+GG K SGFG++ G L+ Y
Sbjct: 359 PWGGIKRSGFGRELGEWGLENY 424
>gb|CV266581.1|CV266581 WS0203.B21_G18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0203_G18 3', mRNA sequence
Length = 456
Score = 112 bits (239), Expect = 2e-024
Identities = 45/102 (44%), Positives = 65/102 (63%)
Frame = -1 / -2
Query: 399 FGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLDXXXXXXXXXXXXXXXXNCYFAMG 220
FGPV ++KFK V+E I R+N TRYGL AG+ T+++D NC+
Sbjct: 455 FGPVQSILKFKNVDEVIRRSNSTRYGLAAGIFTKNVDTANTLSRALRVGTVWVNCFDVFD 276
Query: 219 SDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPWI* 94
+ PFGG KMSG G+++G+++L+ YL VK+VVTPL+ W+*
Sbjct: 275 AAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNPAWL* 150
>gb|CV269512.1|CV269512 WS0208.B21_H09 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0208_H09 3', mRNA sequence
Length = 456
Score = 112 bits (239), Expect = 2e-024
Identities = 45/102 (44%), Positives = 65/102 (63%)
Frame = -1 / -2
Query: 399 FGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLDXXXXXXXXXXXXXXXXNCYFAMG 220
FGPV ++KFK V+E I R+N TRYGL AG+ T+++D NC+
Sbjct: 455 FGPVQSILKFKNVDEVIRRSNSTRYGLAAGIFTKNVDTANTLSRALRVGTVWVNCFDVFD 276
Query: 219 SDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPWI* 94
+ PFGG KMSG G+++G+++L+ YL VK+VVTPL+ W+*
Sbjct: 275 AAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNPAWL* 150
>gb|CF234427.1|CF234427 Ptajxojxo2E10E1010 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 655
Score = 86.3 bits (182), Expect(2) = 6e-024
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+++EPT+ T+V M I +EE+FGPV+C+ F +EAI ANDT YGLGA V++ DL
Sbjct: 31 KGFFVEPTIITDVTTSMQIWREEVFGPVLCVKTFSSEDEAIELANDTHYGLGAAVISNDL 210
Query: 291 D 289
+
Sbjct: 211 E 213
Score = 44.1 bits (90), Expect(2) = 6e-024
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -1 / +1
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G L+ YL+VK V + PW
Sbjct: 292 PWGGIKRSGFGRELGEWGLENYLSVKQVTQYISDEPW 402
>gb|BU865374.1|BU865374 S052H04 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 433
Score = 86.3 bits (182), Expect(3) = 1e-023
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+++EPT+ T+V M I +EE+FGPV+C+ F +EAI ANDT YGLGA V++ DL
Sbjct: 119 KGFFVEPTIITDVTTSMQIWREEVFGPVLCVKTFSSEDEAIELANDTHYGLGAAVISNDL 298
Query: 291 D 289
+
Sbjct: 299 E 301
Score = 35.9 bits (72), Expect(3) = 1e-023
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -1 / +2
Query: 561 QYERVLSYIGHGKREGATLLTGG 493
QYE+VL +I + EGAT+L+GG
Sbjct: 29 QYEKVLEFIATARSEGATILSGG 97
Score = 24.4 bits (47), Expect(3) = 1e-023
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1 / +2
Query: 210 PFGGRKMSGFGKD 172
P+GG K SGFG++
Sbjct: 380 PWGGIKRSGFGRE 418
>gb|CX657151.1|CX657151 PO02030H12 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02030H12 5', mRNA sequence
Length = 352
Score = 108 bits (231), Expect = 3e-023
Identities = 44/91 (48%), Positives = 61/91 (67%)
Frame = -1 / +2
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEGKGYYIEPTVFTNVKEDMIIAKEEIFGPVMC 382
QYE+VL +I EGAT+L+GG KG+++EPT+ T+V M I +EE+ GPV+C
Sbjct: 65 QYEKVLEFIATAXSEGATILSGGNRPKHFTKGFFVEPTIITDVTTSMQIWREEVLGPVLC 244
Query: 381 LMKFKPVEEAIARANDTRYGLGAGVVTRDLD 289
+ F +EAI ANDT YGLGA V++ DL+
Sbjct: 245 VKTFSSEDEAIELANDTHYGLGAAVISNDLE 337
>gb|CF233934.1|CF233934 PtaJXO0029D1D0107 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 705
Score = 95.5 bits (202), Expect(2) = 4e-023
Identities = 35/55 (63%), Positives = 48/55 (87%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGV 307
KGY+I+PTVF+NV++DM+IA++EIFGPV ++KFK V+E I R+N TRYGL AG+
Sbjct: 345 KGYFIQPTVFSNVEDDMLIAQDEIFGPVQSILKFKNVDEVIRRSNSTRYGLAAGI 509
Score = 32.2 bits (64), Expect(2) = 4e-023
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1 / +3
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+E+VL YI G ATL GG+ G +G
Sbjct: 261 QFEKVLRYIRSGVESNATLECGGQRFGSKG 350
>gb|DT479200.1|DT479200 WS02525.BR_A24 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_A24 5', mRNA sequence
Length = 538
Score = 81.3 bits (171), Expect(2) = 1e-022
Identities = 31/64 (48%), Positives = 43/64 (67%)
Frame = -1 / +2
Query: 486 CGPEGKGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGV 307
C KG+++EPT+ +V M I +EE+FGPV+C+ F +EAI ANDT YGLGA V
Sbjct: 47 CQHLNKGFFVEPTIIIDVTTSMQIWREEVFGPVLCVKTFSTEDEAIDLANDTHYGLGAAV 226
Query: 306 VTRD 295
++ D
Sbjct: 227 ISND 238
Score = 44.6 bits (91), Expect(2) = 1e-022
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -1 / +2
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G L+ YL+VK V + PW
Sbjct: 323 PWGGIKRSGFGRELGEWGLENYLSVKQVTRYISEEPW 433
>gb|DT484312.1|DT484312 WS02525.B21_A24 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_A24 3', mRNA sequence
Length = 538
Score = 81.3 bits (171), Expect(2) = 1e-022
Identities = 31/64 (48%), Positives = 43/64 (67%)
Frame = -1 / -2
Query: 486 CGPEGKGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGV 307
C KG+++EPT+ +V M I +EE+FGPV+C+ F +EAI ANDT YGLGA V
Sbjct: 492 CQHLNKGFFVEPTIIIDVTTSMQIWREEVFGPVLCVKTFSTEDEAIDLANDTHYGLGAAV 313
Query: 306 VTRD 295
++ D
Sbjct: 312 ISND 301
Score = 44.6 bits (91), Expect(2) = 1e-022
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -1 / -2
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G L+ YL+VK V + PW
Sbjct: 216 PWGGIKRSGFGRELGEWGLENYLSVKQVTRYISEEPW 106
>gb|CK088015.1|CK088015 A031P29.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A031P29 3', mRNA sequence
Length = 611
Score = 80.3 bits (169), Expect(2) = 2e-022
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = -1 / -2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
KG+++EPT+ +V M I +EE+FGPV+C+ F +EAI ANDT YGLGA V++ D
Sbjct: 604 KGFFVEPTIIIDVTTSMQIWREEVFGPVLCVKTFSTEDEAIDLANDTHYGLGAAVISND 428
Score = 44.6 bits (91), Expect(2) = 2e-022
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -1 / -2
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G L+ YL+VK V + PW
Sbjct: 343 PWGGIKRSGFGRELGEWGLENYLSVKQVTQYISEEPW 233
>gb|CV255453.1|CV255453 WS02414.B21_A22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02414_A22 3', mRNA sequence
Length = 606
Score = 80.3 bits (169), Expect(2) = 2e-022
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = -1 / -1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
KG+++EPT+ +V M I +EE+FGPV+C+ F +EAI ANDT YGLGA V++ D
Sbjct: 597 KGFFVEPTIIIDVTTSMQIWREEVFGPVLCVKTFSTEDEAIDLANDTHYGLGAAVISND 421
Score = 44.6 bits (91), Expect(2) = 2e-022
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G L+ YL+VK V + PW
Sbjct: 336 PWGGIKRSGFGRELGEWGLENYLSVKQVTRYISEEPW 226
>gb|DT508385.1|DT508385 WS02420.BR_N08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_N08 5', mRNA sequence
Length = 566
Score = 80.3 bits (169), Expect(2) = 2e-022
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
KG+++EPT+ +V M I +EE+FGPV+C+ F +EAI ANDT YGLGA V++ D
Sbjct: 15 KGFFVEPTIIIDVTTSMQIWREEVFGPVLCVKTFSTEDEAIDLANDTHYGLGAAVISND 191
Score = 44.6 bits (91), Expect(2) = 2e-022
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -1 / +3
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G L+ YL+VK V + PW
Sbjct: 276 PWGGIKRSGFGRELGEWGLENYLSVKQVTRYISEEPW 386
>gb|DT512995.1|DT512995 WS02420.B21_N08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_N08 3', mRNA sequence
Length = 566
Score = 80.3 bits (169), Expect(2) = 2e-022
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = -1 / -3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
KG+++EPT+ +V M I +EE+FGPV+C+ F +EAI ANDT YGLGA V++ D
Sbjct: 552 KGFFVEPTIIIDVTTSMQIWREEVFGPVLCVKTFSTEDEAIDLANDTHYGLGAAVISND 376
Score = 44.6 bits (91), Expect(2) = 2e-022
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -1 / -3
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G L+ YL+VK V + PW
Sbjct: 291 PWGGIKRSGFGRELGEWGLENYLSVKQVTRYISEEPW 181
>gb|BU862883.1|BU862883 S021B03 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 422
Score = 86.3 bits (182), Expect(2) = 2e-021
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+++EPT+ T+V M I +EE+FGPV+C+ F +EAI ANDT YGLGA V++ DL
Sbjct: 149 KGFFVEPTIITDVTTSMQIWREEVFGPVLCVKTFSSEDEAIELANDTHYGLGAAVISNDL 328
Query: 291 D 289
+
Sbjct: 329 E 331
Score = 35.9 bits (72), Expect(2) = 2e-021
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -1 / +2
Query: 561 QYERVLSYIGHGKREGATLLTGG 493
QYE+VL +I + EGAT+L+GG
Sbjct: 59 QYEKVLEFIATARSEGATILSGG 127
>gb|BU813476.1|BU813476 N010H08 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 410
Score = 101 bits (216), Expect = 3e-021
Identities = 42/86 (48%), Positives = 55/86 (63%)
Frame = -1 / +3
Query: 333 TRYGLGAGVVTRDLDXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHAL 154
T+YGL AG+VT++LD NCYFA DC +GG KMSGFG+ G+ AL
Sbjct: 9 TKYGLAAGIVTKNLDVANTVSRSIRAGTIWINCYFAFDHDCSYGGYKMSGFGRHLGIEAL 188
Query: 153 DKYLAVKSVVTPLRASPWI*FSLISG 76
K+L VKSVVTP+ SPW+* + ++G
Sbjct: 189 HKFLQVKSVVTPIYNSPWL*INKMNG 266
>gb|DN485521.1|DN485521 N010H08.3pR Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N010H08 3', mRNA sequence
Length = 300
Score = 101 bits (216), Expect = 3e-021
Identities = 42/86 (48%), Positives = 55/86 (63%)
Frame = -1 / -3
Query: 333 TRYGLGAGVVTRDLDXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHAL 154
T+YGL AG+VT++LD NCYFA DC +GG KMSGFG+ G+ AL
Sbjct: 298 TKYGLAAGIVTKNLDVANTVSRSIRAGTIWINCYFAFDHDCSYGGYKMSGFGRHLGIEAL 119
Query: 153 DKYLAVKSVVTPLRASPWI*FSLISG 76
K+L VKSVVTP+ SPW+* + ++G
Sbjct: 118 HKFLQVKSVVTPIYNSPWL*INKMNG 41
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 214,392,500
Number of Sequences: 369679
Number of extensions: 2548239
Number of successful extensions: 42240
Number of sequences better than 1.0e-020: 61
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 7293439591
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)