TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2542512.2.1
(834 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ778148.1|AJ778148 AJ778148 Populus euphratica root 3-6... 89 1e-044
gb|CV245520.1|CV245520 WS0257.B21_K11 PT-MB-N-A-15 Populus ... 84 5e-043
gb|CV238561.1|CV238561 WS0127.B21.1_C15 PT-GT-FL-A-3 Populu... 84 6e-043
gb|BP934526.1|BP934526 BP934526 full-length enriched poplar... 105 8e-042
gb|CV280421.1|CV280421 WS0136.B21_D04 PTxD-IL-FL-A-4 Populu... 93 5e-041
gb|CV277407.1|CV277407 WS0143.B21_I04 PTxD-IL-A-5 Populus t... 93 5e-041
gb|CV260665.1|CV260665 WS02014.B21_K24 PTxN-IB-N-A-11 Popul... 93 5e-041
gb|DT482299.1|DT482299 WS02519.B21_H04 PT-MB-N-A-15 Populus... 84 4e-040
gb|DT486500.1|DT486500 WS02531.B21_C15 PT-MB-N-A-15 Populus... 111 5e-040
gb|DT481189.1|DT481189 WS02531.BR_C15 PT-MB-N-A-15 Populus ... 111 5e-040
gb|CV257056.1|CV257056 WS0245.B21_I18 PTxD-ICC-N-A-14 Popul... 106 7e-040
gb|DT520766.1|DT520766 WS02448.B21_H16 PTxD-ICC-N-A-14 Popu... 105 5e-039
gb|CA933374.1|CA933374 MTU5CS.P7.B07 Aspen stem cDNA Librar... 92 3e-038
gb|CV233662.1|CV233662 WS01211.B21_O07 PT-GT-FL-A-3 Populus... 93 4e-038
gb|CV234566.1|CV234566 WS01215.B21.1_F20 PT-GT-FL-A-3 Popul... 93 8e-038
gb|AJ778169.1|AJ778169 AJ778169 Populus euphratica root 3-6... 89 8e-038
gb|DT490773.1|DT490773 WS02545.B21_O14 PT-MB-N-A-15 Populus... 93 3e-036
gb|BP933856.1|BP933856 BP933856 full-length enriched poplar... 105 1e-035
gb|DN493029.1|DN493029 X052G12.3pR Populus wood cDNA librar... 76 3e-035
gb|DN490943.1|DN490943 UM41TA11.3pR Populus female catkins ... 91 2e-033
gb|BP933761.1|BP933761 BP933761 full-length enriched poplar... 101 2e-033
gb|DT488614.1|DT488614 WS02536.B21_O19 PT-MB-N-A-15 Populus... 65 7e-033
gb|CA933969.1|CA933969 MTU3TS.P1.B01 Aspen stem cDNA Librar... 90 2e-032
gb|CA934325.1|CA934325 MTU3TS.P6.B09 Aspen stem cDNA Librar... 90 2e-032
gb|BU884975.1|BU884975 R018G10 Populus root cDNA library Po... 66 5e-032
gb|CX178904.1|CX178904 B10_45-54_04.ab1 leaf inoculated wit... 88 5e-032
gb|CA933153.1|CA933153 MTU5CS.P4.B06 Aspen stem cDNA Librar... 89 1e-030
gb|CA934866.1|CA934866 MTU5TS.P25.A03 Aspen stem cDNA Libra... 89 1e-030
gb|CF118892.1|CF118892 MTU10CS.P10.G07 Aspen stem cDNA Libr... 89 1e-030
gb|CA932949.1|CA932949 MTU5CS.P1.E08 Aspen stem cDNA Librar... 89 1e-030
gb|CA933011.1|CA933011 MTU5CS.P2.D01 Aspen stem cDNA Librar... 89 1e-030
gb|CA933292.1|CA933292 MTU5CS.P6.A11 Aspen stem cDNA Librar... 89 1e-030
gb|CA934797.1|CA934797 MTU5TS.P23.H12 Aspen stem cDNA Libra... 89 1e-030
gb|CA934868.1|CA934868 MTU5TS.P25.A05 Aspen stem cDNA Libra... 89 1e-030
gb|CA934869.1|CA934869 MTU5TS.P25.A06 Aspen stem cDNA Libra... 89 1e-030
gb|CF119042.1|CF119042 MTU10CS.P12.G04 Aspen stem cDNA Libr... 89 1e-030
gb|CF119124.1|CF119124 MTU10CS.P13.G10 Aspen stem cDNA Libr... 89 1e-030
gb|CF119239.1|CF119239 MTU10CS.P15.C06 Aspen stem cDNA Libr... 89 1e-030
gb|CF119285.1|CF119285 MTU10CS.P15.H02 Aspen stem cDNA Libr... 89 1e-030
gb|CA933707.1|CA933707 MTU3TS.P11.C12 Aspen stem cDNA Libra... 89 1e-030
gb|CA933339.1|CA933339 MTU5CS.P6.F08 Aspen stem cDNA Librar... 86 6e-030
gb|CV277411.1|CV277411 WS0143.B21_I08 PTxD-IL-A-5 Populus t... 70 7e-030
gb|CA932735.1|CA932735 MTU5CS.P16.G06 Aspen stem cDNA Libra... 89 9e-030
gb|CV276225.1|CV276225 WS0179.B21_A22 PTxD-NR-A-8 Populus t... 81 9e-030
gb|CV238758.1|CV238758 WS0127.B21.1_O14 PT-GT-FL-A-3 Populu... 79 1e-029
gb|CF119058.1|CF119058 MTU10CS.P12.H08 Aspen stem cDNA Libr... 89 1e-029
gb|CF119433.1|CF119433 MTU10CS.P1.G08 Aspen stem cDNA Libra... 89 1e-029
gb|CF119044.1|CF119044 MTU10CS.P12.G06 Aspen stem cDNA Libr... 73 1e-029
gb|CV130783.1|CV130783 B9SP10h03 Populus stem seasonal libr... 69 1e-029
gb|DT481430.1|DT481430 WS02531.BR_N16 PT-MB-N-A-15 Populus ... 69 1e-029
gb|DT483994.1|DT483994 WS02524.B21_C12 PT-MB-N-A-15 Populus... 79 1e-029
gb|AJ780694.1|AJ780694 AJ780694 Populus euphratica leaf 3-6... 86 1e-029
gb|CA932853.1|CA932853 MTU5CS.P18.C09 Aspen stem cDNA Libra... 89 2e-029
gb|CA932857.1|CA932857 MTU5CS.P18.D02 Aspen stem cDNA Libra... 89 2e-029
gb|CA932984.1|CA932984 MTU5CS.P2.A03 Aspen stem cDNA Librar... 88 3e-029
gb|CA932689.1|CA932689 MTU5CS.P16.B10 Aspen stem cDNA Libra... 83 8e-029
gb|CV255138.1|CV255138 WS02412.B21_C21 PTxD-ICC-N-A-14 Popu... 65 2e-028
gb|DT490486.1|DT490486 WS02545.B21_B15 PT-MB-N-A-15 Populus... 84 2e-028
gb|DT486048.1|DT486048 WS02529.B21_O05 PT-MB-N-A-15 Populus... 69 6e-028
gb|CV243043.1|CV243043 WS02516.B21.1_L21 PT-MB-N-A-15 Popul... 73 8e-028
gb|CA933622.1|CA933622 MTU3TS.P10.A07 Aspen stem cDNA Libra... 79 1e-027
gb|DN496268.1|DN496268 P052A05.5pR Populus petioles cDNA li... 74 1e-026
gb|CV276578.1|CV276578 WS0141.B21_D12 PTxD-IL-A-5 Populus t... 65 3e-026
gb|DT525060.1|DT525060 WS02044.C21_F08 PTxN-IB-N-A-11 Popul... 65 5e-026
gb|BU885586.1|BU885586 R033D01 Populus root cDNA library Po... 70 1e-025
gb|DT512908.1|DT512908 WS02420.B21_J09 PTxD-ICC-N-A-14 Popu... 66 2e-025
gb|DN488218.1|DN488218 R042B07.3pR Populus root cDNA librar... 69 4e-025
gb|CK110264.1|CK110264 N055A05 Populus bark cDNA library Po... 71 4e-025
gb|CN523594.1|CN523594 GQ015M02.T3_G12 GQ015 Populus tricho... 70 7e-025
gb|AJ773558.1|AJ773558 AJ773558 Populus euphratica shoot 3-... 83 2e-024
gb|AJ773559.1|AJ773559 AJ773559 Populus euphratica shoot 3-... 83 2e-024
gb|BU896193.1|BU896193 X037A01 Populus wood cDNA library Po... 73 2e-024
gb|BU866312.1|BU866312 S065C03 Populus imbibed seed cDNA li... 71 5e-024
gb|CA822187.1|CA822187 R04G06 two-month-old roots from clon... 69 6e-024
gb|CV280916.1|CV280916 WS0138.B21_D09 PTxD-IL-FL-A-4 Populu... 62 7e-024
gb|CV268803.1|CV268803 WS0206.B21_H22 PTxN-IB-N-A-11 Populu... 65 8e-024
gb|DT481771.1|DT481771 WS02532.BR_O04 PT-MB-N-A-15 Populus ... 69 2e-023
gb|DT486757.1|DT486757 WS02531.B21_N16 PT-MB-N-A-15 Populus... 69 2e-023
gb|DN497904.1|DN497904 R042B07.5pR Populus root cDNA librar... 66 3e-023
gb|CK088835.1|CK088835 A075P09.3pR Hybrid aspen plasmid lib... 70 4e-023
gb|CA824973.1|CA824973 R51C03 two-month-old roots from clon... 69 4e-023
gb|CV229915.1|CV229915 WS01914.B21_N16 PT-DX-N-A-10 Populus... 58 5e-023
gb|CA934106.1|CA934106 MTU3TS.P2.H12 Aspen stem cDNA Librar... 68 8e-023
gb|BU811011.1|BU811011 UL78TH06 Populus leaf cDNA library P... 66 1e-022
gb|CV239153.1|CV239153 WS0231.B21_H17 PT-MB-A-13 Populus tr... 67 1e-022
gb|CN519795.1|CN519795 GQ0105.B3_D08 GQ010 Populus trichoca... 53 1e-022
gb|DT513020.1|DT513020 WS02420.B21_O10 PTxD-ICC-N-A-14 Popu... 57 2e-022
gb|CF229725.1|CF229725 PtaXM0028H10H1016 Poplar cDNA librar... 69 2e-022
gb|BU831012.1|BU831012 T016A09 Populus apical shoot cDNA li... 58 2e-022
gb|CV263273.1|CV263273 WS02020.B21_N09 PTxN-IB-N-A-11 Popul... 68 6e-022
gb|DT525402.1|DT525402 WS02045.C21_E02 PTxN-IB-N-A-11 Popul... 68 6e-022
gb|DT525953.1|DT525953 WS02046.C21_L17 PTxN-IB-N-A-11 Popul... 68 6e-022
gb|DT518861.1|DT518861 WS02439.B21_I08 PTxD-ICC-N-A-14 Popu... 63 9e-022
gb|CK088855.1|CK088855 A076P09.3pR Hybrid aspen plasmid lib... 72 9e-022
gb|BU878221.1|BU878221 V044E07 Populus flower cDNA library ... 71 9e-022
gb|CA823660.1|CA823660 R29E05 two-month-old roots from clon... 62 9e-022
gb|CV232998.1|CV232998 WS0199.B21_F05 PT-DX-N-A-10 Populus ... 71 2e-021
gb|BP930615.1|BP930615 BP930615 full-length enriched poplar... 91 2e-021
gb|CV269352.1|CV269352 WS0208.B21_A13 PTxN-IB-N-A-11 Populu... 68 2e-021
gb|CV260160.1|CV260160 WS02013.B21_F05 PTxN-IB-N-A-11 Popul... 79 3e-021
gb|CV271771.1|CV271771 WS0155.B21_K06 PTxN-IB-A-6 Populus t... 79 3e-021
gb|DN491286.1|DN491286 UM82TF02.3pR Populus female catkins ... 61 4e-021
gb|CA933625.1|CA933625 MTU3TS.P10.A10 Aspen stem cDNA Libra... 58 5e-021
gb|DT488831.1|DT488831 WS02537.B21_I22 PT-MB-N-A-15 Populus... 62 6e-021
gb|DT526525.1|DT526525 WS02048.C21_E10 PTxN-IB-N-A-11 Popul... 52 6e-021
gb|DT515953.1|DT515953 WS02429.B21.1_P20 PTxD-ICC-N-A-14 Po... 65 6e-021
gb|DT511261.1|DT511261 WS02429.BR_P20 PTxD-ICC-N-A-14 Popul... 65 6e-021
>gb|AJ778148.1|AJ778148 AJ778148 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400040A11F1, mRNA sequence
Length = 684
Score = 89.0 bits (188), Expect(3) = 1e-044
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +1 / +3
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
+RL+ D+P L YL+CVINETLRLYPV PLLLP + DCTV GY+VP+GT+L V
Sbjct: 210 TRLVEELDLPKLNYLRCVINETLRLYPVVPLLLPRCPSEDCTVAGYKVPKGTILQV 377
Score = 79.0 bits (166), Expect(3) = 1e-044
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = +2 / +3
Query: 413 EGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAV 592
EG +PFGMGRR CPG + +R L +A L QCF W+R +DMT + +M +
Sbjct: 468 EGIRFIPFGMGRRACPGSNMGMRAIMLAMAALFQCFEWERAGPEMVDMTPAAANSMVKVK 647
Query: 593 PLEATC 610
PLEA C
Sbjct: 648 PLEAFC 665
Score = 51.0 bits (105), Expect(3) = 1e-044
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +2 / +3
Query: 11 DTMIMALCGXLFTAGTETTSSTIEWAMSLLLNHP 112
D +I L +F AGT+T + T+EWAMSLLLNHP
Sbjct: 60 DDIIKGLVLAIFAAGTDTVAVTMEWAMSLLLNHP 161
>gb|CV245520.1|CV245520 WS0257.B21_K11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0257_K11 3', mRNA sequence
Length = 892
Score = 84.0 bits (177), Expect(4) = 5e-043
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = +2 / -3
Query: 425 MLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEA 604
++PFG+GRR CPG+ LA R L L +LIQCF W R+ EIDM E +T+ + PL A
Sbjct: 476 LMPFGLGRRACPGDGLANRVMALTLGSLIQCFEWKRVSEKEIDMAEFTTITICKVEPLVA 297
Query: 605 TCKPR 619
CK R
Sbjct: 296 MCKAR 282
Score = 82.6 bits (174), Expect(4) = 5e-043
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +1 / -3
Query: 166 LITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
LI D+P L YL +I+E LRLYPVAPLL+PH S+AD TVGGY VP T+LF+
Sbjct: 737 LIDESDLPKLHYLHDIISENLRLYPVAPLLVPHMSSADSTVGGYHVPARTMLFI 576
Score = 36.8 bits (74), Expect(4) = 5e-043
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +2 / -3
Query: 41 LFTAGTETTSSTIEWAMSLLLNHP 112
L+ AG ET+++++EWAM+ LLN P
Sbjct: 866 LWVAGIETSATSLEWAMANLLNQP 795
Score = 27.6 bits (54), Expect(4) = 5e-043
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / -3
Query: 305 PAARCCSSHAYAIHRDPAAW 364
PA +A+AIHRDP W
Sbjct: 599 PARTMLFINAWAIHRDPTLW 540
>gb|CV238561.1|CV238561 WS0127.B21.1_C15 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0127_C15 3', mRNA sequence
Length = 624
Score = 84.0 bits (177), Expect(4) = 6e-043
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = +2 / -2
Query: 425 MLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEA 604
++PFG+GRR CPG+ LA R L L +LIQCF W R+ EIDM E +T+ + PL A
Sbjct: 215 LMPFGLGRRACPGDGLANRVMALTLGSLIQCFEWKRVSEKEIDMAEFTTITICKVEPLVA 36
Query: 605 TCKPR 619
CK R
Sbjct: 35 MCKAR 21
Score = 82.6 bits (174), Expect(4) = 6e-043
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +1 / -2
Query: 166 LITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
LI D+P L YL +I+E LRLYPVAPLL+PH S+AD TVGGY VP T+LF+
Sbjct: 476 LIDESDLPKLHYLHDIISENLRLYPVAPLLVPHMSSADSTVGGYHVPARTMLFI 315
Score = 36.3 bits (73), Expect(4) = 6e-043
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2 / -2
Query: 41 LFTAGTETTSSTIEWAMSLLLNHP 112
L AG ET+++++EWAM+ LLN P
Sbjct: 605 LLVAGIETSATSLEWAMANLLNQP 534
Score = 27.6 bits (54), Expect(4) = 6e-043
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / -2
Query: 305 PAARCCSSHAYAIHRDPAAW 364
PA +A+AIHRDP W
Sbjct: 338 PARTMLFINAWAIHRDPTLW 279
>gb|BP934526.1|BP934526 BP934526 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-066_E19.r 3', mRNA sequence
Length = 704
Score = 105 bits (223), Expect(2) = 8e-042
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +2 / -1
Query: 413 EGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAV 592
+G ++PFG GRR CPGE +ALR GL L +L+QCF W +ID +DMTE+ G T+P+A
Sbjct: 416 DGFKLMPFGYGRRSCPGEGMALRVMGLALGSLLQCFEWQKIDDKMVDMTEASGFTVPKAK 237
Query: 593 PLEATCKPREAM 628
PL+ C+PR M
Sbjct: 236 PLKVICRPRPDM 201
Score = 85.8 bits (181), Expect(2) = 8e-042
Identities = 31/55 (56%), Positives = 43/55 (78%)
Frame = +1 / -1
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
R++ D+ L YL ++NETLR+YP APLL+PHES+ +C VGG+ +PRGT+LFV
Sbjct: 671 RVMDESDLAQLPYLHSILNETLRMYPAAPLLVPHESSEECLVGGFRIPRGTMLFV 507
>gb|CV280421.1|CV280421 WS0136.B21_D04 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0136_D04 3', mRNA sequence
Length = 938
Score = 92.7 bits (196), Expect(4) = 5e-041
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +1 / -3
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+ D+P L Y++CV+NETLRLYP APLLLPH + DC VGGY++PRGT++ V
Sbjct: 648 RLVQESDLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCIVGGYKIPRGTIVMV 484
Score = 65.2 bits (136), Expect(4) = 5e-041
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / -3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 399 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGKELVDMS 247
Score = 42.3 bits (86), Expect(4) = 5e-041
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2 / -3
Query: 11 DTMIMALCGXLFTAGTETTSSTIEWAMSLLLNHP 112
D ++ L+ AG +T T EWAM+ LLNHP
Sbjct: 801 DEVVKGTMATLYLAGVDTVDFTTEWAMTFLLNHP 700
Score = 24.0 bits (46), Expect(4) = 5e-041
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2 / -3
Query: 572 LTMPRAVPLEATCKPR 619
+++ +A PLEA C PR
Sbjct: 231 ISVQKAKPLEAICTPR 184
>gb|CV277407.1|CV277407 WS0143.B21_I04 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0143_I04 3', mRNA sequence
Length = 878
Score = 92.7 bits (196), Expect(4) = 5e-041
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +1 / -2
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+ D+P L Y++CV+NETLRLYP APLLLPH + DC VGGY++PRGT++ V
Sbjct: 694 RLVQESDLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCIVGGYKIPRGTIVMV 530
Score = 65.2 bits (136), Expect(4) = 5e-041
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / -2
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 445 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGKELVDMS 293
Score = 42.3 bits (86), Expect(4) = 5e-041
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2 / -2
Query: 11 DTMIMALCGXLFTAGTETTSSTIEWAMSLLLNHP 112
D ++ L+ AG +T T EWAM+ LLNHP
Sbjct: 847 DEVVKGTMATLYLAGVDTVDFTTEWAMTFLLNHP 746
Score = 24.0 bits (46), Expect(4) = 5e-041
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2 / -2
Query: 572 LTMPRAVPLEATCKPR 619
+++ +A PLEA C PR
Sbjct: 277 ISVQKAKPLEAICTPR 230
>gb|CV260665.1|CV260665 WS02014.B21_K24 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02014_K24 3', mRNA sequence
Length = 875
Score = 92.7 bits (196), Expect(4) = 5e-041
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +1 / -2
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+ D+P L Y++CV+NETLRLYP APLLLPH + DC VGGY++PRGT++ V
Sbjct: 664 RLVQESDLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCIVGGYKIPRGTIVMV 500
Score = 65.2 bits (136), Expect(4) = 5e-041
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / -2
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 415 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGKELVDMS 263
Score = 42.3 bits (86), Expect(4) = 5e-041
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2 / -2
Query: 11 DTMIMALCGXLFTAGTETTSSTIEWAMSLLLNHP 112
D ++ L+ AG +T T EWAM+ LLNHP
Sbjct: 817 DEVVKGTMATLYLAGVDTVDFTTEWAMTFLLNHP 716
Score = 24.0 bits (46), Expect(4) = 5e-041
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2 / -2
Query: 572 LTMPRAVPLEATCKPR 619
+++ +A PLEA C PR
Sbjct: 247 ISVQKAKPLEAICTPR 200
>gb|DT482299.1|DT482299 WS02519.B21_H04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02519_H04 3', mRNA sequence
Length = 844
Score = 84.0 bits (177), Expect(4) = 4e-040
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = +2 / -2
Query: 425 MLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEA 604
++PFG+GRR CPG+ LA R L L +LIQCF W R+ EIDM E +T+ + PL A
Sbjct: 474 LMPFGLGRRACPGDGLANRVMALTLGSLIQCFEWKRVSEKEIDMAEFTTITICKVEPLVA 295
Query: 605 TCKPR 619
CK R
Sbjct: 294 MCKAR 280
Score = 82.6 bits (174), Expect(4) = 4e-040
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +1 / -2
Query: 166 LITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
LI D+P L YL +I+E LRLYPVAPLL+PH S+AD TVGGY VP T+LF+
Sbjct: 735 LIDESDLPKLHYLHDIISENLRLYPVAPLLVPHMSSADSTVGGYHVPTRTMLFI 574
Score = 28.1 bits (55), Expect(4) = 4e-040
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2 / -2
Query: 62 TTSSTIEWAMSLLLNHP 112
T+++++EWAM+ LLN P
Sbjct: 843 TSATSLEWAMANLLNQP 793
Score = 26.3 bits (51), Expect(4) = 4e-040
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 329 HAYAIHRDPAAW 364
+A+AIHRDP W
Sbjct: 573 NAWAIHRDPTLW 538
>gb|DT486500.1|DT486500 WS02531.B21_C15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02531_C15 3', mRNA sequence
Length = 544
Score = 111 bits (236), Expect(2) = 5e-040
Identities = 46/108 (42%), Positives = 59/108 (54%)
Frame = +2 / -1
Query: 305 PAARCCSSHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRT 484
PA ++A+ IHRDP W K+E +PFGMGRR CPGE LA R
Sbjct: 442 PAGTILFANAWGIHRDPTLWNDPTSFKPERFENWKSEAYTHMPFGMGRRACPGEGLAQRI 263
Query: 485 AGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
+ L +LIQCF W+++DG +IDMT+ M R P EA C+ R M
Sbjct: 262 MAITLGSLIQCFEWEKVDGKDIDMTDKMHTLMCRVEPAEAMCRVRPDM 119
Score = 73.9 bits (155), Expect(2) = 5e-040
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1 / -1
Query: 202 LQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLF 324
+Q VI E+LRL+PV PLL PH S+ADCT+GGY+VP GT+LF
Sbjct: 544 VQSVILESLRLHPVVPLLAPHMSSADCTIGGYDVPAGTILF 422
>gb|DT481189.1|DT481189 WS02531.BR_C15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02531_C15 5', mRNA sequence
Length = 543
Score = 111 bits (236), Expect(2) = 5e-040
Identities = 46/108 (42%), Positives = 59/108 (54%)
Frame = +2 / +1
Query: 305 PAARCCSSHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRT 484
PA ++A+ IHRDP W K+E +PFGMGRR CPGE LA R
Sbjct: 103 PAGTILFANAWGIHRDPTLWNDPTSFKPERFENWKSEAYTHMPFGMGRRACPGEGLAQRI 282
Query: 485 AGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
+ L +LIQCF W+++DG +IDMT+ M R P EA C+ R M
Sbjct: 283 MAITLGSLIQCFEWEKVDGKDIDMTDKMHTLMCRVEPAEAMCRVRPDM 426
Score = 73.9 bits (155), Expect(2) = 5e-040
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1 / +1
Query: 202 LQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLF 324
+Q VI E+LRL+PV PLL PH S+ADCT+GGY+VP GT+LF
Sbjct: 1 VQSVILESLRLHPVVPLLAPHMSSADCTIGGYDVPAGTILF 123
>gb|CV257056.1|CV257056 WS0245.B21_I18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0245_I18 3', mRNA sequence
Length = 719
Score = 106 bits (226), Expect(3) = 7e-040
Identities = 42/105 (40%), Positives = 58/105 (55%)
Frame = +2 / -2
Query: 305 PAARCCSSHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRT 484
P+ +A++IHR+P W GK E +LPFG+GRR CPGE +A R
Sbjct: 490 PSGAMVLVNAWSIHRNPNVWDDPLSFKPERFENGKGEPYRLLPFGLGRRGCPGEAMAFRV 311
Query: 485 AGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPR 619
LV++ L+QCF + +DG E+DMTE+ M + PL CK R
Sbjct: 310 INLVMSQLLQCFEFSTVDGKEVDMTETAATLMLKITPLHLVCKAR 176
Score = 72.5 bits (152), Expect(3) = 7e-040
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +1 / -2
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL D L Y+QC+I+E LRL P APLL+PH ++ CT+GGY++P G ++ V
Sbjct: 631 RLADEPDFANLHYIQCIIHENLRLCPPAPLLVPHVASERCTLGGYDIPSGAMVLV 467
Score = 23.5 bits (45), Expect(3) = 7e-040
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 77 IEWAMSLLLNHP 112
+EWA S LLN+P
Sbjct: 718 LEWAFSNLLNNP 683
>gb|DT520766.1|DT520766 WS02448.B21_H16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02448_H16 3', mRNA sequence
Length = 885
Score = 105 bits (225), Expect(2) = 5e-039
Identities = 46/105 (43%), Positives = 56/105 (53%)
Frame = +2 / -2
Query: 305 PAARCCSSHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRT 484
P ++A++I RDP W GKAE ++PFG+GRR CPGE LA R
Sbjct: 434 PPGTMVFANAWSIQRDPKVWDDPLNFKPERFLDGKAEAYKVMPFGLGRRSCPGEGLAHRL 255
Query: 485 AGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPR 619
L L +LIQCF WD +DG EI+M E M R PLE K R
Sbjct: 254 MTLTLGSLIQCFEWDTVDGKEINMDEKVATLMSRVQPLEVVLKAR 120
Score = 75.8 bits (159), Expect(2) = 5e-039
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +1 / -2
Query: 166 LITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLF 324
LI +D+ L YLQ +I+E LRLYPVA +L+PH ++ CT+GGY+VP GT++F
Sbjct: 572 LIEEEDISKLHYLQGIISENLRLYPVAAMLVPHVASDYCTIGGYDVPPGTMVF 414
>gb|CA933374.1|CA933374 MTU5CS.P7.B07 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 649
Score = 92.3 bits (195), Expect(3) = 3e-038
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +1 / -2
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+ D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 423 RLVQESDLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTVVMV 259
Score = 65.2 bits (136), Expect(3) = 3e-038
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / -2
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 174 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELVDMS 22
Score = 39.6 bits (80), Expect(3) = 3e-038
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2 / -2
Query: 41 LFTAGTETTSSTIEWAMSLLLNHP 112
L+ AG +T T EWAM+ LLNHP
Sbjct: 546 LYLAGVDTVDFTTEWAMTFLLNHP 475
>gb|CV233662.1|CV233662 WS01211.B21_O07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01211_O07 3', mRNA sequence
Length = 725
Score = 92.7 bits (196), Expect(4) = 4e-038
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +1 / -1
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+ D+P L Y++CV+NETLRLYP APLLLPH + DC VGGY++PRGT++ V
Sbjct: 620 RLVQESDLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCIVGGYKIPRGTIVMV 456
Score = 65.2 bits (136), Expect(4) = 4e-038
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / -1
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 371 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGKELVDMS 219
Score = 32.2 bits (64), Expect(4) = 4e-038
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2 / -1
Query: 59 ETTSSTIEWAMSLLLNHP 112
+T T EWAM+ LLNHP
Sbjct: 725 DTVDFTTEWAMTFLLNHP 672
Score = 24.0 bits (46), Expect(4) = 4e-038
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 572 LTMPRAVPLEATCKPR 619
+++ +A PLEA C PR
Sbjct: 203 ISVQKAKPLEAICTPR 156
>gb|CV234566.1|CV234566 WS01215.B21.1_F20 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01215_F20 3', mRNA sequence
Length = 809
Score = 92.7 bits (196), Expect(4) = 8e-038
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +1 / -3
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+ D+P L Y++CV+NETLRLYP APLLLPH + DC VGGY++PRGT++ V
Sbjct: 705 RLVQESDLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCIVGGYKIPRGTIVMV 541
Score = 65.2 bits (136), Expect(4) = 8e-038
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / -3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 456 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGKELVDMS 304
Score = 31.3 bits (62), Expect(4) = 8e-038
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -3
Query: 62 TTSSTIEWAMSLLLNHP 112
T T EWAM+ LLNHP
Sbjct: 807 TVDFTTEWAMTFLLNHP 757
Score = 24.0 bits (46), Expect(4) = 8e-038
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2 / -3
Query: 572 LTMPRAVPLEATCKPR 619
+++ +A PLEA C PR
Sbjct: 288 ISVQKAKPLEAICTPR 241
>gb|AJ778169.1|AJ778169 AJ778169 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400040C11F1, mRNA sequence
Length = 679
Score = 89.0 bits (188), Expect(4) = 8e-038
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +1 / +1
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
+RL+ D+P L YL+CVINETLRLYPV PLLLP + DCTV GY+VP+GT+L V
Sbjct: 193 TRLVEELDLPKLNYLRCVINETLRLYPVVPLLLPRCPSEDCTVAGYKVPKGTILQV 360
Score = 51.0 bits (105), Expect(4) = 8e-038
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +2 / +1
Query: 11 DTMIMALCGXLFTAGTETTSSTIEWAMSLLLNHP 112
D +I L +F AGT+T + T+EWAMSLLLNHP
Sbjct: 43 DDIIKGLVLAIFAAGTDTVAVTMEWAMSLLLNHP 144
Score = 40.0 bits (81), Expect(4) = 8e-038
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2 / +2
Query: 425 MLPFGMGRRRCPGETLALRTAGLVLATLIQCF 520
+ P GRR CPG + +R L +A L QCF
Sbjct: 464 LFPLVWGRRACPGSNMGMRAIMLAMAALFQCF 559
Score = 33.1 bits (66), Expect(4) = 8e-038
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2 / +2
Query: 533 IDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
+D +DMT + +M + PLEA CKP +M
Sbjct: 575 LDREMVDMTPAAANSMVKVKPLEAFCKPYHSM 670
>gb|DT490773.1|DT490773 WS02545.B21_O14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02545_O14 3', mRNA sequence
Length = 746
Score = 92.7 bits (196), Expect(4) = 3e-036
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +1 / -3
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+ D+P L Y++CV+NETLRLYP APLLLPH + DC VGGY++PRGT++ V
Sbjct: 663 RLVQESDLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCIVGGYKIPRGTIVMV 499
Score = 65.2 bits (136), Expect(4) = 3e-036
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / -3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 414 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGKELVDMS 262
Score = 25.8 bits (50), Expect(4) = 3e-036
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / -3
Query: 83 WAMSLLLNHP 112
WAM+ LLNHP
Sbjct: 744 WAMTFLLNHP 715
Score = 24.0 bits (46), Expect(4) = 3e-036
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2 / -3
Query: 572 LTMPRAVPLEATCKPR 619
+++ +A PLEA C PR
Sbjct: 246 ISVQKAKPLEAICTPR 199
>gb|BP933856.1|BP933856 BP933856 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-057_H16.r 3', mRNA sequence
Length = 606
Score = 105 bits (223), Expect(2) = 1e-035
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +2 / -3
Query: 413 EGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAV 592
+G ++PFG GRR CPGE +ALR GL L +L+QCF W +ID +DMTE+ G T+P+A
Sbjct: 415 DGFKLMPFGYGRRSCPGEGMALRVMGLALGSLLQCFEWQKIDDKMVDMTEASGFTVPKAK 236
Query: 593 PLEATCKPREAM 628
PL+ C+PR M
Sbjct: 235 PLKVICRPRPDM 200
Score = 65.2 bits (136), Expect(2) = 1e-035
Identities = 22/33 (66%), Positives = 29/33 (87%)
Frame = +1 / -3
Query: 229 RLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
R+YP APLL+PHES+ +C VGG+ +PRGT+LFV
Sbjct: 604 RMYPAAPLLVPHESSEECLVGGFRIPRGTMLFV 506
>gb|DN493029.1|DN493029 X052G12.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X052G12 3', mRNA sequence
Length = 800
Score = 76.2 bits (160), Expect(3) = 3e-035
Identities = 32/56 (57%), Positives = 37/56 (66%)
Frame = +1 / -1
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
+R + DV L YLQ ++ ETLRLYP PLL+P ES DC V GY VPRGT L V
Sbjct: 608 TRWVEESDVKNLVYLQAIVKETLRLYPPGPLLVPRESLEDCYVDGYLVPRGTQLLV 441
Score = 70.7 bits (148), Expect(3) = 3e-035
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +2 / -1
Query: 428 LPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEAT 607
+PFG GRR CPG + +L+ L L+ L+Q F++ A++DM+E GLT+P+A PLE
Sbjct: 323 VPFGSGRRLCPGISSSLQMLHLTLSRLLQGFNFSIPKNAQVDMSEGLGLTLPKATPLEVV 144
Query: 608 CKPR 619
PR
Sbjct: 143 LTPR 132
Score = 40.0 bits (81), Expect(3) = 3e-035
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2 / -1
Query: 41 LFTAGTETTSSTIEWAMSLLLNH 109
L AG +TTS T+ WA+SLLLNH
Sbjct: 728 LIVAGVDTTSITLTWALSLLLNH 660
>gb|DN490943.1|DN490943 UM41TA11.3pR Populus female catkins cDNA library Populus
trichocarpa cDNA clone UM41TA11 3', mRNA sequence
Length = 703
Score = 91.3 bits (193), Expect(3) = 2e-033
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +1 / -1
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+ D+P L Y++CV+NETLRLYP APLL+PH + DC VGGY++PRGT++ V
Sbjct: 652 RLVQESDLPKLRYVRCVVNETLRLYPPAPLLVPHAPSEDCIVGGYKIPRGTIVMV 488
Score = 65.2 bits (136), Expect(3) = 2e-033
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / -1
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 403 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGKELVDMS 251
Score = 24.0 bits (46), Expect(3) = 2e-033
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 572 LTMPRAVPLEATCKPR 619
+++ +A PLEA C PR
Sbjct: 235 ISVQKAKPLEAICTPR 188
>gb|BP933761.1|BP933761 BP933761 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-056_E01.r 3', mRNA sequence
Length = 568
Score = 101 bits (216), Expect(2) = 2e-033
Identities = 42/98 (42%), Positives = 54/98 (55%)
Frame = +2 / -3
Query: 326 SHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRTAGLVLAT 505
++A++I RDP W G+ E ++PFG+GRR CPGE LA R L L +
Sbjct: 461 ANAWSIQRDPKVWDDPLSFKPERFLNGETEAYKLMPFGLGRRSCPGEGLAYRLMTLTLGS 282
Query: 506 LIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPR 619
LIQCF WD +DG EI++ E M R PLE K R
Sbjct: 281 LIQCFEWDTVDGKEINVDEKVATLMSRVQPLEVVMKAR 168
Score = 60.6 bits (126), Expect(2) = 2e-033
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +1 / -3
Query: 220 ETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLF 324
E LRLYPVA +L+PH + CT+GGY+VP GT++F
Sbjct: 566 ENLRLYPVAAMLVPHVACEHCTIGGYDVPHGTMVF 462
>gb|DT488614.1|DT488614 WS02536.B21_O19 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02536_O19 3', mRNA sequence
Length = 874
Score = 65.2 bits (136), Expect(4) = 7e-033
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +1 / -1
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+T D+ L YLQ V+ ET RL+P PL LP + C +GGY +P+G+ + V
Sbjct: 538 RLVTELDLAQLTYLQAVVKETFRLHPSTPLSLPRIAAESCEIGGYHIPKGSTVLV 374
Score = 53.3 bits (110), Expect(4) = 7e-033
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +2 / -1
Query: 425 MLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDG 541
++PFG GRR C G +L LR L+ ATLI F WD DG
Sbjct: 253 LIPFGAGRRICAGMSLGLRMVQLLTATLIHAFDWDLADG 137
Score = 51.5 bits (106), Expect(4) = 7e-033
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +2 / -1
Query: 11 DTMIMALCGXLFTAGTETTSSTIEWAMSLLLNHP 112
DT I AL +FTAGT+T+SST+EWA++ L+ HP
Sbjct: 691 DTEIKALLLNMFTAGTDTSSSTVEWAIAELIRHP 590
Score = 26.3 bits (51), Expect(4) = 7e-033
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2 / -1
Query: 545 EIDMTESGGLTMPRAVPLEATCKPR 619
+++M E+ GLT+ RA PL +PR
Sbjct: 124 KLNMDEAYGLTLQRADPLMVHPRPR 50
>gb|CA933969.1|CA933969 MTU3TS.P1.B01 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 544
Score = 89.5 bits (189), Expect(3) = 2e-032
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = +1 / -3
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+ D+P L Y++CV+NET RLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 422 RLVQESDLPKLRYVRCVVNETPRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 258
Score = 57.0 bits (118), Expect(3) = 2e-032
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2 / -3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHW 526
+ E + +PFG+GRR CPG +A+R L LA LIQCF W
Sbjct: 173 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEW 54
Score = 30.9 bits (61), Expect(3) = 2e-032
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -3
Query: 62 TTSSTIEWAMSLLLNHP 112
T T EWAM+ LLNHP
Sbjct: 524 TIDFTTEWAMTFLLNHP 474
>gb|CA934325.1|CA934325 MTU3TS.P6.B09 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 544
Score = 89.5 bits (189), Expect(3) = 2e-032
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = +1 / -3
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+ D+P L Y++CV+NET RLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 422 RLVQESDLPKLRYVRCVVNETPRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 258
Score = 57.0 bits (118), Expect(3) = 2e-032
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2 / -3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHW 526
+ E + +PFG+GRR CPG +A+R L LA LIQCF W
Sbjct: 173 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEW 54
Score = 30.9 bits (61), Expect(3) = 2e-032
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -3
Query: 62 TTSSTIEWAMSLLLNHP 112
T T EWAM+ LLNHP
Sbjct: 524 TIDFTTEWAMTFLLNHP 474
>gb|BU884975.1|BU884975 R018G10 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 656
Score = 65.7 bits (137), Expect(4) = 5e-032
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +1 / -2
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+T D+ L YLQ V+ ET RL+P PL LP + C +GGY +P+G+ + V
Sbjct: 493 RLVTELDLAQLTYLQAVVKETFRLHPSTPLSLPRMAAESCEIGGYHIPKGSTVLV 329
Score = 53.3 bits (110), Expect(4) = 5e-032
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +2 / -2
Query: 425 MLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDG 541
++PFG GRR C G +L LR L+ ATLI F WD DG
Sbjct: 208 LIPFGAGRRICAGMSLGLRMVQLLTATLIHAFDWDLADG 92
Score = 46.9 bits (96), Expect(4) = 5e-032
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = +2 / -2
Query: 41 LFTAGTETTSSTIEWAMSLLLNHP 112
+FTAGT+TTSST+EWA++ L+ HP
Sbjct: 616 MFTAGTDTTSSTVEWAIAELMRHP 545
Score = 27.6 bits (54), Expect(4) = 5e-032
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 545 EIDMTESGGLTMPRAVPLEATCKPR 619
+++M E+ GLT+ RA PL +PR
Sbjct: 79 KLNMDEAYGLTLQRAAPLMVHPRPR 5
>gb|CX178904.1|CX178904 B10_45-54_04.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 702
Score = 88.1 bits (186), Expect(3) = 5e-032
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / -1
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 630 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCIIGGYKIPRGTIVMV 484
Score = 65.2 bits (136), Expect(3) = 5e-032
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / -1
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 399 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGKELVDMS 247
Score = 22.6 bits (43), Expect(3) = 5e-032
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 572 LTMPRAVPLEATCKPR 619
+++ +A PL+A C PR
Sbjct: 231 ISVQKAKPLDAICTPR 184
>gb|CA933153.1|CA933153 MTU5CS.P4.B06 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 428
Score = 88.6 bits (187), Expect(2) = 1e-030
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / -3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 405 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 259
Score = 65.2 bits (136), Expect(2) = 1e-030
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / -3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 174 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELVDMS 22
>gb|CA934866.1|CA934866 MTU5TS.P25.A03 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 425
Score = 88.6 bits (187), Expect(2) = 1e-030
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / +3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 9 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 155
Score = 65.2 bits (136), Expect(2) = 1e-030
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 240 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELVDMS 392
>gb|CF118892.1|CF118892 MTU10CS.P10.G07 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 415
Score = 88.6 bits (187), Expect(2) = 1e-030
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / +3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 9 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 155
Score = 65.2 bits (136), Expect(2) = 1e-030
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 240 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELVDMS 392
>gb|CA932949.1|CA932949 MTU5CS.P1.E08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 413
Score = 88.6 bits (187), Expect(2) = 1e-030
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / +3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 9 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 155
Score = 65.2 bits (136), Expect(2) = 1e-030
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 240 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELVDMS 392
>gb|CA933011.1|CA933011 MTU5CS.P2.D01 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 413
Score = 88.6 bits (187), Expect(2) = 1e-030
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / -3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 405 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 259
Score = 65.2 bits (136), Expect(2) = 1e-030
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / -3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 174 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELVDMS 22
>gb|CA933292.1|CA933292 MTU5CS.P6.A11 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 413
Score = 88.6 bits (187), Expect(2) = 1e-030
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / +3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 9 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 155
Score = 65.2 bits (136), Expect(2) = 1e-030
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 240 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELVDMS 392
>gb|CA934797.1|CA934797 MTU5TS.P23.H12 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 413
Score = 88.6 bits (187), Expect(2) = 1e-030
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / +3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 9 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 155
Score = 65.2 bits (136), Expect(2) = 1e-030
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 240 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELVDMS 392
>gb|CA934868.1|CA934868 MTU5TS.P25.A05 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 413
Score = 88.6 bits (187), Expect(2) = 1e-030
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / +3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 9 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 155
Score = 65.2 bits (136), Expect(2) = 1e-030
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 240 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELVDMS 392
>gb|CA934869.1|CA934869 MTU5TS.P25.A06 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 413
Score = 88.6 bits (187), Expect(2) = 1e-030
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / +3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 9 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 155
Score = 65.2 bits (136), Expect(2) = 1e-030
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 240 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELVDMS 392
>gb|CF119042.1|CF119042 MTU10CS.P12.G04 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 413
Score = 88.6 bits (187), Expect(2) = 1e-030
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / +3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 9 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 155
Score = 65.2 bits (136), Expect(2) = 1e-030
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 240 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELVDMS 392
>gb|CF119124.1|CF119124 MTU10CS.P13.G10 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 413
Score = 88.6 bits (187), Expect(2) = 1e-030
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / +3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 9 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 155
Score = 65.2 bits (136), Expect(2) = 1e-030
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 240 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELVDMS 392
>gb|CF119239.1|CF119239 MTU10CS.P15.C06 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 413
Score = 88.6 bits (187), Expect(2) = 1e-030
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / +3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 9 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 155
Score = 65.2 bits (136), Expect(2) = 1e-030
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 240 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELVDMS 392
>gb|CF119285.1|CF119285 MTU10CS.P15.H02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 413
Score = 88.6 bits (187), Expect(2) = 1e-030
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / +3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 9 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 155
Score = 65.2 bits (136), Expect(2) = 1e-030
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 240 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELVDMS 392
>gb|CA933707.1|CA933707 MTU3TS.P11.C12 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 413
Score = 88.6 bits (187), Expect(2) = 1e-030
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / +3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 9 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 155
Score = 64.8 bits (135), Expect(2) = 1e-030
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 240 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELLDMS 392
>gb|CA933339.1|CA933339 MTU5CS.P6.F08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 413
Score = 85.8 bits (181), Expect(2) = 6e-030
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = +1 / +3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 9 DLPKLRYVRCVDNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 155
Score = 65.2 bits (136), Expect(2) = 6e-030
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 240 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGQELVDMS 392
>gb|CV277411.1|CV277411 WS0143.B21_I08 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0143_I08 3', mRNA sequence
Length = 886
Score = 69.8 bits (146), Expect(3) = 7e-030
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = +1 / -1
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
R + D+ L YLQ ++ ETLRLYP PL E+ DC++GGY+VP+GT L V
Sbjct: 700 RWVEESDIQNLKYLQAIVKETLRLYPPGPLTGIREAMEDCSIGGYDVPKGTRLVV 536
Score = 64.3 bits (134), Expect(3) = 7e-030
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = +2 / -1
Query: 428 LPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEAT 607
+PF GRR CP L L L LA ++Q F + G +DM E G+ +P+ PLE
Sbjct: 418 IPFSSGRRSCPAINLGLIVVHLTLARILQGFDLTTVAGLPVDMIEGPGIALPKETPLEVV 239
Query: 608 CKPR 619
KPR
Sbjct: 238 IKPR 227
Score = 34.5 bits (69), Expect(3) = 7e-030
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2 / -1
Query: 11 DTMIMALCGXLFTAGTETTSSTIEWAMSLLLNHP 112
D +I A L G +T++T+ W +SLLLN+P
Sbjct: 853 DVVIKATALILTLTGAGSTATTLVWTLSLLLNNP 752
>gb|CA932735.1|CA932735 MTU5CS.P16.G06 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 415
Score = 88.6 bits (187), Expect(2) = 9e-030
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / +3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 9 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 155
Score = 62.0 bits (129), Expect(2) = 9e-030
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+ + +DM+
Sbjct: 240 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWEGVGQELVDMS 392
>gb|CV276225.1|CV276225 WS0179.B21_A22 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0179_A22 3', mRNA sequence
Length = 747
Score = 81.3 bits (171), Expect(2) = 9e-030
Identities = 33/64 (51%), Positives = 44/64 (68%)
Frame = +2 / -3
Query: 428 LPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEAT 607
+PFG GRR CPG + AL+ L LATL+ F+ + +D A IDMTE+GG+T +A PL+A
Sbjct: 352 IPFGSGRRMCPGISFALQVLNLALATLLHGFNIETVDDAPIDMTETGGITNVKATPLKAL 173
Query: 608 CKPR 619
PR
Sbjct: 172 LTPR 161
Score = 71.6 bits (150), Expect(2) = 9e-030
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +1 / -3
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLL 321
R + D+ L YLQ + E+ RLYP APL PHES +CTVGGY +P GT L
Sbjct: 634 RQVKESDMKNLVYLQAIFKESFRLYPAAPLSGPHESMEECTVGGYHIPAGTRL 476
>gb|CV238758.1|CV238758 WS0127.B21.1_O14 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0127_O14 3', mRNA sequence
Length = 583
Score = 79.0 bits (166), Expect(3) = 1e-029
Identities = 28/42 (66%), Positives = 36/42 (85%)
Frame = +1 / -2
Query: 202 LQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
++CV+NETLRLYP APLLLPH + DC VGGY++PRGT++ V
Sbjct: 582 VRCVVNETLRLYPPAPLLLPHAPSEDCIVGGYKIPRGTIVMV 457
Score = 65.2 bits (136), Expect(3) = 1e-029
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / -2
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMT 559
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+ +DM+
Sbjct: 372 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERVGKELVDMS 220
Score = 24.0 bits (46), Expect(3) = 1e-029
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2 / -2
Query: 572 LTMPRAVPLEATCKPR 619
+++ +A PLEA C PR
Sbjct: 204 ISVQKAKPLEAICTPR 157
>gb|CF119058.1|CF119058 MTU10CS.P12.H08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 416
Score = 88.6 bits (187), Expect(2) = 1e-029
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / -3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 408 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 262
Score = 61.6 bits (128), Expect(2) = 1e-029
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +2 / -3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRI 535
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+
Sbjct: 177 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERV 49
>gb|CF119433.1|CF119433 MTU10CS.P1.G08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 416
Score = 88.6 bits (187), Expect(2) = 1e-029
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / -3
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+P L Y++CV+NETLRLYP APLLLPH + DC +GGY++PRGT++ V
Sbjct: 408 DLPKLRYVRCVVNETLRLYPPAPLLLPHAPSEDCVIGGYKIPRGTIVMV 262
Score = 61.6 bits (128), Expect(2) = 1e-029
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +2 / -3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRI 535
+ E + +PFG+GRR CPG +A+R L LA LIQCF W+R+
Sbjct: 177 EGEKQGFIPFGIGRRACPGNHMAMRRVMLALAALIQCFEWERV 49
>gb|CF119044.1|CF119044 MTU10CS.P12.G06 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 777
Score = 73.5 bits (154), Expect(5) = 1e-029
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1 / -2
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
R++T D GL YLQCV E LRL+P PL+LPH + A+ VGGY++P+G+ + V
Sbjct: 491 RVMTEADFSGLPYLQCVAKEALRLHPPTPLMLPHRANANVKVGGYDIPKGSNVHV 327
Score = 39.6 bits (80), Expect(5) = 1e-029
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2 / -2
Query: 425 MLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDG 541
+LPFG GRR CPG L + +L L+ F W +G
Sbjct: 218 LLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFCWTPPEG 102
Score = 36.3 bits (73), Expect(5) = 1e-029
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2 / -2
Query: 20 IMALCGXLFTAGTETTSSTIEWAMSLLLNHP 112
I+ L + TAG +TT+ ++EWAM+ L+ +P
Sbjct: 635 IIGLLWDMITAGMDTTAISVEWAMAELIKNP 543
Score = 29.0 bits (57), Expect(5) = 1e-029
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2 / -2
Query: 545 EIDMTESGGLTMPRAVPLEATCKPR 619
EIDM+E+ GL PL+A PR
Sbjct: 89 EIDMSENPGLVTYMRTPLQAVATPR 15
Score = 23.5 bits (45), Expect(5) = 1e-029
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 329 HAYAIHRDPAAW 364
+ +A+ RDPAAW
Sbjct: 326 NVWAVARDPAAW 291
>gb|CV130783.1|CV130783 B9SP10h03 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 910
Score = 68.9 bits (144), Expect(3) = 1e-029
Identities = 27/64 (42%), Positives = 36/64 (56%)
Frame = +2 / +1
Query: 428 LPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEAT 607
+PF GRR CP L + L LA L+Q F + G +DM E G+ +P+ +PLEA
Sbjct: 553 IPFSSGRRSCPAINLGMAVVHLTLARLLQGFDLTTVAGLPVDMNEGPGIALPKLIPLEAV 732
Query: 608 CKPR 619
KPR
Sbjct: 733 IKPR 744
Score = 60.6 bits (126), Expect(3) = 1e-029
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +1 / +1
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+ L YLQ ++ ETLRLYP PL E+ DC + GY VP+GT L V
Sbjct: 289 DIQNLMYLQAIVEETLRLYPPGPLTGIREAMEDCHICGYYVPKGTRLVV 435
Score = 38.2 bits (77), Expect(3) = 1e-029
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2 / +1
Query: 11 DTMIMALCGXLFTAGTETTSSTIEWAMSLLLNHP 112
D +I A L G +T+ T+ WA+SLLLNHP
Sbjct: 118 DVVIKATTLILTLTGAGSTAVTLTWALSLLLNHP 219
>gb|DT481430.1|DT481430 WS02531.BR_N16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02531_N16 5', mRNA sequence
Length = 880
Score = 68.9 bits (144), Expect(3) = 1e-029
Identities = 27/64 (42%), Positives = 36/64 (56%)
Frame = +2 / +1
Query: 428 LPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEAT 607
+PF GRR CP L + L LA L+Q F + G +DM E G+ +P+ +PLEA
Sbjct: 460 IPFSSGRRSCPAINLGMAVVHLTLARLLQGFDLTTVAGLPVDMNEGPGIALPKLIPLEAV 639
Query: 608 CKPR 619
KPR
Sbjct: 640 IKPR 651
Score = 60.6 bits (126), Expect(3) = 1e-029
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +1 / +1
Query: 181 DVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
D+ L YLQ ++ ETLRLYP PL E+ DC + GY VP+GT L V
Sbjct: 196 DIQNLMYLQAIVKETLRLYPPGPLTGIREAMEDCHICGYYVPKGTRLVV 342
Score = 38.2 bits (77), Expect(3) = 1e-029
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2 / +1
Query: 11 DTMIMALCGXLFTAGTETTSSTIEWAMSLLLNHP 112
D +I A L G +T+ T+ WA+SLLLNHP
Sbjct: 25 DVVIKATTLILTLTGAGSTAVTLTWALSLLLNHP 126
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 319,125,425
Number of Sequences: 369679
Number of extensions: 3437928
Number of successful extensions: 31573
Number of sequences better than 1.0e-020: 120
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 10930405500
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)