TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2486118.2.1
(635 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY162184.1| Populus tremuloides cellulose synthase-like ... 264 3e-070
gb|BU866508.1|BU866508 S067E12 Populus imbibed seed cDNA li... 256 8e-068
gb|DN492612.1|DN492612 X027H11.3pR Populus wood cDNA librar... 246 9e-065
gb|CX657583.1|CX657583 PO02055D08 Poplar SC cDNA library Po... 215 2e-055
gb|CK101612.1|CK101612 F102P83.5pR Populus flower cDNA libr... 210 9e-054
gb|BP935608.1|BP935608 BP935608 full-length enriched poplar... 197 5e-050
gb|CV249691.1|CV249691 WS01125.B21_A04 PT-P-FL-A-2 Populus ... 172 1e-042
gb|BI138288.1|BI138288 F102P83Y Populus flower cDNA library... 160 1e-038
gb|CF228734.1|CF228734 PtaXM0016G4G0414 Poplar cDNA library... 150 8e-036
gb|CF229187.1|CF229187 PtaXM0022D10D1008 Poplar cDNA librar... 149 1e-035
gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA libra... 149 1e-035
gb|CF235000.1|CF235000 PtaJXT0017F7F0711 Poplar cDNA librar... 149 1e-035
gb|CF236510.1|CF236510 PtaJXT3F6F0612 Poplar cDNA library f... 149 1e-035
gb|CK318662.1|CK318662 X9P01h06 Populus stem seasonal libra... 149 1e-035
gb|AY573573.2| Populus tremula x Populus tremuloides cellul... 149 1e-035
gb|BU894292.1|BU894292 X005H01 Populus wood cDNA library Po... 149 2e-035
gb|BU897587.1|BU897587 X060B01 Populus wood cDNA library Po... 149 2e-035
gb|CF228576.1|CF228576 PtaXM0014G2G0214 Poplar cDNA library... 149 2e-035
gb|CF232848.1|CF232848 PtaJXO0016E6E0610 Poplar cDNA librar... 149 2e-035
gb|AY573574.1| Populus tremula x Populus tremuloides cellul... 149 2e-035
gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA librar... 148 3e-035
gb|AY196961.1| Populus tremuloides cellulose synthase 6 (Ce... 148 4e-035
gb|BU815407.1|BU815407 N041C05 Populus bark cDNA library Po... 147 5e-035
gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichoca... 147 5e-035
gb|DN495393.1|DN495393 N041C05.5pR Populus bark cDNA librar... 147 5e-035
gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus... 147 5e-035
gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus tr... 147 5e-035
gb|AY095297.1| Populus tremuloides cellulose synthase (CesA... 147 5e-035
gb|CF228459.1|CF228459 PtaXM0013C2C0206 Poplar cDNA library... 147 7e-035
gb|CN519879.1|CN519879 GQ0108.B3_I06 GQ010 Populus trichoca... 147 7e-035
gb|CN549469.1|CN549469 GQ0241.B3_B20 GQ024 Populus trichoca... 147 7e-035
gb|CV283069.1|CV283069 WS0186.B21_F15 PTxD-IL-N-A-9 Populus... 147 7e-035
gb|DT470299.1|DT470299 WS01920.C21_H07 PT-DX-N-A-10 Populus... 147 7e-035
gb|AY162181.1| Populus tremuloides cellulose synthase (CesA... 147 7e-035
gb|CA934196.1|CA934196 MTU3TS.P4.D08 Aspen stem cDNA Librar... 146 1e-034
gb|CV242542.1|CV242542 WS02515.B21_F16 PT-MB-N-A-15 Populus... 146 1e-034
gb|AY055724.2| Populus tremuloides cellulose synthase (CesA... 146 1e-034
gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-... 145 2e-034
gb|AJ775294.1|AJ775294 AJ775294 Populus euphratica shoot 3-... 145 2e-034
gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal libr... 145 2e-034
gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-... 145 3e-034
gb|CV227790.1|CV227790 WS0168.B21_D13 PT-DX-A-7 Populus tri... 145 3e-034
gb|BU817734.1|BU817734 UA20CPD09 Populus tremula cambium cD... 144 4e-034
gb|CV229552.1|CV229552 WS01913.B21_K14 PT-DX-N-A-10 Populus... 144 5e-034
gb|CF227502.1|CF227502 PtaD6G2G0214 Poplar cDNA library fro... 143 9e-034
gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal libr... 143 9e-034
gb|CV282433.1|CV282433 WS0184.B21_J19 PTxD-IL-N-A-9 Populus... 143 9e-034
gb|AY573575.1| Populus tremula x Populus tremuloides cellul... 143 1e-033
gb|AY162180.1| Populus tremuloides cellulose synthase (CesA... 143 1e-033
gb|CK087778.1|CK087778 A020P56.3pR Hybrid aspen plasmid lib... 142 2e-033
gb|CV269892.1|CV269892 WS0209.B21_I09 PTxN-IB-N-A-11 Populu... 142 2e-033
gb|DN503714.1|DN503714 X020A06.3pR Populus wood cDNA librar... 142 2e-033
gb|AY573572.1| Populus tremula x Populus tremuloides cellul... 142 2e-033
gb|BI128217.1|BI128217 G072P74Y Populus cambium cDNA librar... 142 2e-033
gb|CK102305.1|CK102305 G072P74.5pR Populus tension wood cDN... 142 2e-033
gb|CF233341.1|CF233341 PtaJXO0022B5B0503 Poplar cDNA librar... 141 5e-033
gb|CF235304.1|CF235304 PtaJXT0021C1C0105 Poplar cDNA librar... 141 5e-033
gb|CK088642.1|CK088642 A064P24.3pR Hybrid aspen plasmid lib... 141 5e-033
gb|CN520055.1|CN520055 GQ0105.B3_H23 GQ010 Populus trichoca... 141 5e-033
gb|AJ778410.1|AJ778410 AJ778410 Populus euphratica cambium ... 141 5e-033
gb|CK093129.1|CK093129 G109P08.3pR Populus tension wood cDN... 140 6e-033
gb|CN524029.1|CN524029 GQ015M07.T3_H06 GQ015 Populus tricho... 140 6e-033
gb|CK318639.1|CK318639 X9P01f01 Populus stem seasonal libra... 140 6e-033
gb|CV225435.1|CV225435 WS0161.B21_G07 PT-DX-A-7 Populus tri... 140 6e-033
gb|CV225888.1|CV225888 WS0162.B21_K19 PT-DX-A-7 Populus tri... 140 6e-033
gb|CV226017.1|CV226017 WS0163.B21_A20 PT-DX-A-7 Populus tri... 140 6e-033
gb|CV226195.1|CV226195 WS0163.B21_J02 PT-DX-A-7 Populus tri... 140 6e-033
gb|CV238245.1|CV238245 WS0125.B21_N16 PT-GT-FL-A-3 Populus ... 140 6e-033
gb|AF527387.1| Populus tremuloides xylem-specific cellulose... 140 6e-033
gb|AY573571.1| Populus tremula x Populus tremuloides cellul... 140 6e-033
gb|CF235953.1|CF235953 PtaJXT0028H7H0715 Poplar cDNA librar... 139 1e-032
gb|AF081534.1|AF081534 Populus x canescens cellulose syntha... 139 1e-032
gb|CK102806.1|CK102806 G092P25.5pR Populus tension wood cDN... 139 2e-032
gb|BU894931.1|BU894931 X017A07 Populus wood cDNA library Po... 138 2e-032
gb|CF236856.1|CF236856 PtaJXT8A6A0602 Poplar cDNA library f... 137 8e-032
gb|CK092703.1|CK092703 G092P25.3pR Populus tension wood cDN... 136 1e-031
gb|BI127743.1|BI127743 G065P23Y Populus cambium cDNA librar... 135 2e-031
gb|CF236645.1|CF236645 PtaJXT5D1D0107 Poplar cDNA library f... 134 4e-031
gb|BI128874.1|BI128874 G082P82Y Populus cambium cDNA librar... 133 7e-031
gb|CK088138.1|CK088138 A040P09.3pR Hybrid aspen plasmid lib... 101 1e-030
gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus... 121 2e-030
gb|CF227527.1|CF227527 PtaXM0001A6A0602 Poplar cDNA library... 97 2e-030
gb|BU895092.1|BU895092 X019B09 Populus wood cDNA library Po... 132 2e-030
gb|CN524680.1|CN524680 GQ015M13.T3_D10 GQ015 Populus tricho... 131 4e-030
gb|DT487943.1|DT487943 WS02535.B21_B11 PT-MB-N-A-15 Populus... 131 4e-030
gb|BI128439.1|BI128439 G076P02Y Populus cambium cDNA librar... 129 1e-029
gb|DV466097.1|DV466097 MTUNUL1.P47.C03 NUL Populus fremonti... 90 3e-029
gb|BU894855.1|BU894855 X016A07 Populus wood cDNA library Po... 127 5e-029
gb|CV268970.1|CV268970 WS0206.B21_P09 PTxN-IB-N-A-11 Populu... 125 2e-028
gb|CF228386.1|CF228386 PtaXM0012D12D1208 Poplar cDNA librar... 125 3e-028
gb|CV227633.1|CV227633 WS0167.B21_M03 PT-DX-A-7 Populus tri... 116 4e-028
gb|CV235270.1|CV235270 WS01218.B21_H07 PT-GT-FL-A-3 Populus... 105 9e-028
gb|BP931651.1|BP931651 BP931651 full-length enriched poplar... 122 3e-027
gb|CV232087.1|CV232087 WS0196.B21_I06 PT-DX-N-A-10 Populus ... 112 8e-027
gb|CV272431.1|CV272431 WS0157.B21_K08 PTxN-IB-A-6 Populus t... 111 1e-026
gb|AI164546.1|AI164546 A064p24u Hybrid aspen plasmid librar... 117 5e-026
gb|CV227749.1|CV227749 WS0168.B21_B16 PT-DX-A-7 Populus tri... 116 9e-026
gb|CK097446.1|CK097446 UB51DPD11.3pR Populus active cambium... 116 1e-025
gb|BU897715.1|BU897715 X067B10 Populus wood cDNA library Po... 114 6e-025
gb|CK090048.1|CK090048 C058P41.3pR Populus strain T89 leave... 111 3e-024
gb|CV252351.1|CV252351 PX0011.B21_G15 PT-X-FL-A-1 Populus t... 110 8e-024
gb|CV262834.1|CV262834 WS0202.B21_K05 PTxN-IB-N-A-11 Populu... 109 2e-023
gb|BU894361.1|BU894361 X008A10 Populus wood cDNA library Po... 105 2e-022
gb|CF237222.1|CF237222 Ptajxtjxt3E10E1010 Poplar cDNA libra... 105 2e-022
gb|CF229748.1|CF229748 PtaXM0029B4B0404 Poplar cDNA library... 105 3e-022
gb|CV234217.1|CV234217 WS01214.B21_B13 PT-GT-FL-A-3 Populus... 105 4e-022
gb|CV238311.1|CV238311 WS0126.B21_C03 PT-GT-FL-A-3 Populus ... 105 4e-022
gb|CK092841.1|CK092841 G097P01.3pR Populus tension wood cDN... 101 5e-021
gb|CA934311.1|CA934311 MTU3TS.P5.H11 Aspen stem cDNA Librar... 61 9e-021
>gb|AY162184.1| Populus tremuloides cellulose synthase-like protein D4 (CSLD4) mRNA,
partial cds
Length = 3570
Score = 264 bits (572), Expect = 3e-070
Identities = 107/120 (89%), Positives = 112/120 (93%)
Frame = +2 / +3
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDDVDDEF DLY+VKWTSLMIPPI IMMVNLI IAVGFSRTIYS IPQWS+LLGGVFFS
Sbjct: 2958 GGDDVDDEFADLYVVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSRLLGGVFFS 3137
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRGRTPTIVFVW+GL++ITISLLWVAINPPS QIGGSF FP*
Sbjct: 3138 FWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPSGTTQIGGSFQFP* 3317
Score = 173 bits (372), Expect = 1e-042
Identities = 78/123 (63%), Positives = 90/123 (73%)
Frame = -3 / -3
Query: 369 ESFHGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCAS 190
+++ GN N+PPI DGGL+AT EMV+ P TKTMVGV PL PIRPLA G R A
Sbjct: 3325 KTYQGNWNEPPIWVVPDGGLIATQRREMVIAISPDHTKTMVGVLPLLPIRPLAKG*R*AR 3146
Query: 189 TQKLKKTPPSSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXX 10
TQKLKKTPPS+LLHCGI+L*+VRLNPTA+ I+ TIMI +GGIISDVHLT R
Sbjct: 3145 TQKLKKTPPSNLLHCGITL*IVRLNPTAIAIKLTIMIVIGGIISDVHLTT*RSANSSSTS 2966
Query: 9 SPP 1
SPP
Sbjct: 2965 SPP 2957
>gb|BU866508.1|BU866508 S067E12 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 733
Score = 256 bits (554), Expect = 8e-068
Identities = 105/120 (87%), Positives = 110/120 (91%)
Frame = +2 / +1
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDDVDDEF DLY+VKWTSLMIPPI IMMVNLI I VGFSRTIYS IPQWS+LLGGVFFS
Sbjct: 262 GGDDVDDEFADLYVVKWTSLMIPPITIMMVNLIAIVVGFSRTIYSVIPQWSRLLGGVFFS 441
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
F VLAHLYPFAKGLMGRRGRTPTIVFVW+GL++ITISLLWVAINPPS QIGGSF FP*
Sbjct: 442 FRVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPSGTTQIGGSFQFP* 621
Score = 169 bits (364), Expect = 1e-041
Identities = 76/123 (61%), Positives = 89/123 (72%)
Frame = -3 / -3
Query: 369 ESFHGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCAS 190
+++ GN N+PPI DGGL+AT EMV+ P TKTMVGV PL PIRPLA G R A
Sbjct: 629 KTYQGNWNEPPIWVVPDGGLIATQRREMVIAISPDHTKTMVGVLPLLPIRPLAKG*R*AR 450
Query: 189 TQKLKKTPPSSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXX 10
T+KLKKTPPS+LLHCGI+L*+VRLNPT + I+ TIMI +GGIISDVHLT R
Sbjct: 449 TRKLKKTPPSNLLHCGITL*IVRLNPTTIAIKLTIMIVIGGIISDVHLTT*RSANSSSTS 270
Query: 9 SPP 1
SPP
Sbjct: 269 SPP 261
>gb|DN492612.1|DN492612 X027H11.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X027H11 3', mRNA sequence
Length = 647
Score = 246 bits (532), Expect = 9e-065
Identities = 100/119 (84%), Positives = 107/119 (89%)
Frame = +2 / -1
Query: 5 GDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSF 184
GDDVDDEF DLY+V+WTS+M P I IMMVN I IAVGFSRTIYS IPQWS+LLGGVFFS
Sbjct: 647 GDDVDDEFDDLYVVQWTSVMRPRITIMMVNFIAIAVGFSRTIYSVIPQWSRLLGGVFFSL 468
Query: 185 WVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
WVLAHLYPFAKGLMGRRGRTPTIVFVW+GL++ITISLLWVAINPPS QIGGSF FP*
Sbjct: 467 WVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPSGTTQIGGSFQFP* 291
Score = 155 bits (332), Expect = 3e-037
Identities = 68/109 (62%), Positives = 83/109 (76%)
Frame = -3 / +1
Query: 369 ESFHGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCAS 190
+++ GN N+PPI DGGL+AT EMV+ P TKTMVGV PL PIRPLA G R A
Sbjct: 283 KTYQGNWNEPPIWVVPDGGLIATQRREMVIAISPDHTKTMVGVLPLLPIRPLAKG*R*AR 462
Query: 189 TQKLKKTPPSSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLT 43
T KLKKTPPS+LLHCGI+L*+VRLNPTA+ ++ TIMI + G+I+DVH T
Sbjct: 463 THKLKKTPPSNLLHCGITL*IVRLNPTAIAMKLTIMIVIRGLITDVHWT 609
>gb|CX657583.1|CX657583 PO02055D08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02055D08 5', mRNA sequence
Length = 573
Score = 215 bits (464), Expect = 2e-055
Identities = 86/114 (75%), Positives = 96/114 (84%)
Frame = +2 / +3
Query: 20 DEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAH 199
DEF D+YIVKWTSLMIPPI IMMVNLIGI VGF+RTIYS I QWS+L+GGV F+FWVL H
Sbjct: 3 DEFADIYIVKWTSLMIPPITIMMVNLIGITVGFNRTIYSVITQWSRLMGGVSFNFWVLGH 182
Query: 200 LYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
L PF KGLMG++ R PTIVFVW+G + I ISLLWV INPPS +QIGGSF FP*
Sbjct: 183 L*PFGKGLMGKKRRKPTIVFVWSGFIGINISLLWVGINPPSGTKQIGGSFQFP* 344
Score = 140 bits (300), Expect = 9e-033
Identities = 60/110 (54%), Positives = 76/110 (69%)
Frame = -3 / -3
Query: 369 ESFHGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCAS 190
+++ GN NDPPIC DGGL+ T EM++ +P TKTMVG PI P G R
Sbjct: 352 KTYQGNWNDPPICLVPDGGLIPTQRREMLIPIKPDHTKTMVGFLLFFPINPFPKG*R*PK 173
Query: 189 TQKLKKTPPSSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTM 40
TQKLK+TPP + LHC I+L*+VRLNPT +PI+ TI++ +GGII DVH TM
Sbjct: 172 TQKLKETPPINRLHCVITL*IVRLNPTVIPIKLTIIMVIGGIIRDVHFTM 23
>gb|CK101612.1|CK101612 F102P83.5pR Populus flower cDNA library Populus trichocarpa cDNA
clone F102P83 5', mRNA sequence
Length = 503
Score = 210 bits (452), Expect = 9e-054
Identities = 80/104 (76%), Positives = 93/104 (89%)
Frame = +2 / -3
Query: 8 DDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFW 187
+D DDEF DLY+VKW+ LM+PPI IMM+NLI IAVG +RT+YS PQWS+L+GGVFFSFW
Sbjct: 471 EDADDEFADLYVVKWSFLMVPPITIMMLNLIAIAVGVARTLYSPFPQWSRLVGGVFFSFW 292
Query: 188 VLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPP 319
VL+HLYPFAKGLMGRRGR PTIV+VW+GLLSI ISLLWV I+PP
Sbjct: 291 VLSHLYPFAKGLMGRRGRVPTIVYVWSGLLSIIISLLWVYISPP 160
Score = 130 bits (278), Expect = 9e-030
Identities = 57/95 (60%), Positives = 66/95 (69%)
Frame = -3 / +2
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLM THS EM+ME P T TMVG PL PI+PLA G R TQKLK TPP+SLLHCG
Sbjct: 161 GGLMYTHSKEMMMESNPDHT*TMVGTLPLLPIKPLAKG*RWDKTQKLKNTPPTSLLHCGN 340
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYR 34
L V PTA+ IRF+I+I +GG I +HLT Y+
Sbjct: 341 GLYKVLATPTAIAIRFSIIIVIGGTIKKLHLTTYK 445
>gb|BP935608.1|BP935608 BP935608 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-078_M16.r 3', mRNA sequence
Length = 556
Score = 197 bits (425), Expect = 5e-050
Identities = 81/92 (88%), Positives = 85/92 (92%)
Frame = +2 / -1
Query: 86 MVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVW 265
MVNLI IAVGFSRTIYS IPQWS+LL GVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVW
Sbjct: 556 MVNLIAIAVGFSRTIYSVIPQWSRLLXGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVW 377
Query: 266 AGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
+GL++ITISLLWVAINPPS QIGGSF FP*
Sbjct: 376 SGLIAITISLLWVAINPPSGTTQIGGSFQFP* 281
Score = 133 bits (285), Expect = 1e-030
Identities = 60/94 (63%), Positives = 71/94 (75%)
Frame = -3 / +3
Query: 369 ESFHGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCAS 190
+++ GN N+PPI DGGL+AT EMV+ P TKTMVGV PL PIRPLA G R A
Sbjct: 273 KTYQGNWNEPPIWVVPDGGLIATQRREMVIAISPDHTKTMVGVLPLLPIRPLAKG*R*AR 452
Query: 189 TQKLKKTPPSSLLHCGISL*MVRLNPTAMPIRFT 88
TQKLKKTP S+LLHCGI+L*+VRLNPTA+ I+ T
Sbjct: 453 TQKLKKTPXSNLLHCGITL*IVRLNPTAIAIKLT 554
>gb|CV249691.1|CV249691 WS01125.B21_A04 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01125_A04 3', mRNA sequence
Length = 530
Score = 172 bits (371), Expect = 1e-042
Identities = 70/104 (67%), Positives = 84/104 (80%)
Frame = +2 / -3
Query: 8 DDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFW 187
+D DDEF DLY+VKW+ LM+PPI I M+NLI I VG +RT+YS PQWS+L+GGVFFSF
Sbjct: 528 EDADDEFADLYVVKWSFLMVPPIPIRMLNLIAIPVGVARTLYSPFPQWSRLVGGVFFSFG 349
Query: 188 VLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPP 319
VL+HLYPFAKGLMGRRGR P IV+ +GLLSI I L +I+PP
Sbjct: 348 VLSHLYPFAKGLMGRRGRVPPIVYGGSGLLSIIIFLRGGSISPP 217
Score = 102 bits (217), Expect = 2e-021
Identities = 48/95 (50%), Positives = 58/95 (61%)
Frame = -3 / +2
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLM +M+ME P TM G PL PI+PLA G R T KLK TPP+SLLH G
Sbjct: 218 GGLMDPPRKKMMMESNPDPP*TMGGTLPLLPIKPLAKG*RWDKTPKLKNTPPTSLLHWGN 397
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYR 34
L V PT + IRF+I+I +GG I +HLT Y+
Sbjct: 398 GLYKVLATPTGIAIRFSILIGIGGTIKKLHLTTYK 502
>gb|BI138288.1|BI138288 F102P83Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 398
Score = 160 bits (343), Expect = 1e-038
Identities = 62/78 (79%), Positives = 71/78 (91%)
Frame = +2 / -1
Query: 86 MVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVW 265
M+NLI IAVG +RT+YS PQWS+L+GGVFFSFWVL+HLYPFAKGLMGRRGR PTIV+VW
Sbjct: 398 MLNLIAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLSHLYPFAKGLMGRRGRVPTIVYVW 219
Query: 266 AGLLSITISLLWVAINPP 319
+GLLSI ISLLWV I+PP
Sbjct: 218 SGLLSIIISLLWVYISPP 165
Score = 107 bits (228), Expect = 7e-023
Identities = 48/77 (62%), Positives = 53/77 (68%)
Frame = -3 / +1
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLM THS EM+ME P T TMVG PL PI+PLA G R TQKLK TPP+SLLHCG
Sbjct: 166 GGLMYTHSKEMMMESNPDHT*TMVGTLPLLPIKPLAKG*RWDKTQKLKNTPPTSLLHCGN 345
Query: 138 SL*MVRLNPTAMPIRFT 88
L V PTA+ IRF+
Sbjct: 346 GLYKVLATPTAIAIRFS 396
>gb|CF228734.1|CF228734 PtaXM0016G4G0414 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 747
Score = 150 bits (322), Expect = 8e-036
Identities = 54/100 (54%), Positives = 73/100 (73%)
Frame = +2 / +3
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+VKWT+L+IPP ++++N++G+ GFS + W L G VFF+FWV+
Sbjct: 318 DTEFGELYMVKWTTLLIPPTTLLIINIVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIL 497
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV INP
Sbjct: 498 HLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVXINP 617
>gb|CF229187.1|CF229187 PtaXM0022D10D1008 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 727
Score = 149 bits (321), Expect = 1e-035
Identities = 54/100 (54%), Positives = 73/100 (73%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+VKWT+L+IPP ++++N++G+ GFS + W L G VFF+FWV+
Sbjct: 320 DTEFGELYMVKWTTLLIPPTTLLIINIVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIL 499
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV INP
Sbjct: 500 HLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINP 619
>gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 149 bits (321), Expect = 1e-035
Identities = 55/102 (53%), Positives = 73/102 (71%)
Frame = +2 / +2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWT+L+IPP +++VNL+G+ G S I S W L G +FF+FWV
Sbjct: 236 DEDGDFTELYMFKWTTLLIPPTTLLIVNLVGVVAGISHAINSGYQSWGPLFGKLFFAFWV 415
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV ++P
Sbjct: 416 IVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVXVDP 541
>gb|CF235000.1|CF235000 PtaJXT0017F7F0711 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 770
Score = 149 bits (321), Expect = 1e-035
Identities = 54/100 (54%), Positives = 73/100 (73%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+VKWT+L+IPP ++++N++G+ GFS + W L G VFF+FWV+
Sbjct: 301 DTEFGELYMVKWTTLLIPPTTLLIINIVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIL 480
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV INP
Sbjct: 481 HLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINP 600
>gb|CF236510.1|CF236510 PtaJXT3F6F0612 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 552
Score = 149 bits (321), Expect = 1e-035
Identities = 54/100 (54%), Positives = 73/100 (73%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+VKWT+L+IPP ++++N++G+ GFS + W L G VFF+FWV+
Sbjct: 40 DTEFGELYMVKWTTLLIPPTTLLIINIVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIL 219
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV INP
Sbjct: 220 HLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINP 339
>gb|CK318662.1|CK318662 X9P01h06 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 664
Score = 149 bits (321), Expect = 1e-035
Identities = 54/100 (54%), Positives = 73/100 (73%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+VKWT+L+IPP ++++N++G+ GFS + W L G VFF+FWV+
Sbjct: 68 DTEFGELYMVKWTTLLIPPTTLLIINIVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIL 247
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV INP
Sbjct: 248 HLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINP 367
>gb|AY573573.2| Populus tremula x Populus tremuloides cellulose synthase (CesA3-1)
mRNA, complete cds
Length = 3250
Score = 149 bits (321), Expect = 1e-035
Identities = 54/100 (54%), Positives = 73/100 (73%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+VKWT+L+IPP ++++N++G+ GFS + W L G VFF+FWV+
Sbjct: 2624 DTEFGELYMVKWTTLLIPPTTLLIINIVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIL 2803
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV INP
Sbjct: 2804 HLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINP 2923
>gb|BU894292.1|BU894292 X005H01 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 648
Score = 149 bits (320), Expect = 2e-035
Identities = 54/100 (54%), Positives = 73/100 (73%)
Frame = +2 / +3
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+VKWT+L+IPP ++++N++G+ GFS + W L G VFF+FWV+
Sbjct: 24 DAEFGELYMVKWTTLLIPPTTLLIINIVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIL 203
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV INP
Sbjct: 204 HLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINP 323
>gb|BU897587.1|BU897587 X060B01 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 476
Score = 149 bits (320), Expect = 2e-035
Identities = 54/100 (54%), Positives = 73/100 (73%)
Frame = +2 / +3
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+VKWT+L+IPP ++++N++G+ GFS + W L G VFF+FWV+
Sbjct: 90 DAEFGELYMVKWTTLLIPPTTLLIINIVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIL 269
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV INP
Sbjct: 270 HLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINP 389
>gb|CF228576.1|CF228576 PtaXM0014G2G0214 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 683
Score = 149 bits (320), Expect = 2e-035
Identities = 54/100 (54%), Positives = 73/100 (73%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+VKWT+L+IPP ++++N++G+ GFS + W L G VFF+FWV+
Sbjct: 88 DAEFGELYMVKWTTLLIPPTTLLIINIVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIL 267
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV INP
Sbjct: 268 HLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINP 387
>gb|CF232848.1|CF232848 PtaJXO0016E6E0610 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 764
Score = 149 bits (320), Expect = 2e-035
Identities = 54/100 (54%), Positives = 73/100 (73%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+VKWT+L+IPP ++++N++G+ GFS + W L G VFF+FWV+
Sbjct: 277 DAEFGELYMVKWTTLLIPPTTLLIINIVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIL 456
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV INP
Sbjct: 457 HLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINP 576
>gb|AY573574.1| Populus tremula x Populus tremuloides cellulose synthase (CesA3-2)
mRNA, complete cds
Length = 3358
Score = 149 bits (320), Expect = 2e-035
Identities = 54/100 (54%), Positives = 73/100 (73%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+VKWT+L+IPP ++++N++G+ GFS + W L G VFF+FWV+
Sbjct: 2707 DAEFGELYMVKWTTLLIPPTTLLIINIVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIL 2886
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV INP
Sbjct: 2887 HLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINP 3006
>gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 629
Score = 148 bits (318), Expect = 3e-035
Identities = 54/100 (54%), Positives = 72/100 (72%)
Frame = +2 / +3
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
DD+F +LY KWT+L+IPP I+++NL+G+ G S I + W L G +FF+FWV+
Sbjct: 303 DDDFGELYAFKWTTLLIPPTTILIINLVGVVAGVSDAINNGYQSWGPLFGKLFFAFWVIV 482
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SLLWV I+P
Sbjct: 483 HLYPFLKGLMGRQNRTPTIVVIWSXLLASIFSLLWVRIDP 602
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds
Length = 3773
Score = 148 bits (317), Expect = 4e-035
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
DDEF +LY KWT+L+IPP ++++NL+G+ G S I + W L G +FF+FWV+
Sbjct: 2972 DDEFSELYAFKWTTLLIPPTTLLIINLVGVVAGVSNAINNGYESWGPLFGKLFFAFWVIV 3151
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGL+GR+ RTPTI+ VW+ LL+ SLLWV I+P
Sbjct: 3152 HLYPFLKGLLGRQNRTPTIIIVWSILLASIFSLLWVRIDP 3271
>gb|BU815407.1|BU815407 N041C05 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 675
Score = 147 bits (316), Expect = 5e-035
Identities = 54/102 (52%), Positives = 73/102 (71%)
Frame = +2 / +1
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWT+L+IPP ++++NL+G+ G S I S W L G +FF+FWV
Sbjct: 7 DEDGDFTELYMFKWTTLLIPPTTLLIINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWV 186
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV ++P
Sbjct: 187 IIHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRVDP 312
>gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_I15 5', mRNA sequence
Length = 777
Score = 147 bits (316), Expect = 5e-035
Identities = 54/100 (54%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
DD+F +LY KWT+L+IPP I+++NL+G+ G S I + W L G +FF+FWV+
Sbjct: 289 DDDFGELYAFKWTTLLIPPTTILIINLVGVVAGVSDAINNGYQSWGPLFGKLFFAFWVIV 468
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SLLWV I+P
Sbjct: 469 HLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDP 588
>gb|DN495393.1|DN495393 N041C05.5pR Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N041C05 5', mRNA sequence
Length = 544
Score = 147 bits (316), Expect = 5e-035
Identities = 54/102 (52%), Positives = 73/102 (71%)
Frame = +2 / +3
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWT+L+IPP ++++NL+G+ G S I S W L G +FF+FWV
Sbjct: 15 DEDGDFTELYMFKWTTLLIPPTTLLIINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWV 194
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV ++P
Sbjct: 195 IIHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRVDP 320
>gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02553_E11 3', mRNA sequence
Length = 774
Score = 147 bits (316), Expect = 5e-035
Identities = 55/102 (53%), Positives = 73/102 (71%)
Frame = +2 / -2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWTSL+IPP ++++N++GI G S I S W L G +FF+ WV
Sbjct: 629 DEDGDFAELYVFKWTSLLIPPTTVILLNMVGIVAGVSYAINSGYQSWGPLFGKLFFAIWV 450
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+AHLYPF KGL+GR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 449 IAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDP 324
>gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0015_I21
5', mRNA sequence
Length = 687
Score = 147 bits (316), Expect = 5e-035
Identities = 55/102 (53%), Positives = 73/102 (71%)
Frame = +2 / +2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWTSL+IPP ++++N++GI G S I S W L G +FF+ WV
Sbjct: 167 DEDGDFAELYVFKWTSLLIPPTTVILLNMVGIVAGVSYAINSGYQSWGPLFGKLFFAIWV 346
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+AHLYPF KGL+GR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 347 IAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDP 472
>gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds
Length = 3277
Score = 147 bits (316), Expect = 5e-035
Identities = 54/100 (54%), Positives = 72/100 (72%)
Frame = +2 / +3
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
DD+F +LY KWT+L+IPP I+++NL+G+ G S I + W L G +FF+FWV+
Sbjct: 2766 DDDFGELYAFKWTTLLIPPTTILIINLVGVVAGVSDAINNGYQSWGPLFGKLFFAFWVIV 2945
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SLLWV I+P
Sbjct: 2946 HLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDP 3065
>gb|CF228459.1|CF228459 PtaXM0013C2C0206 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 655
Score = 147 bits (315), Expect = 7e-035
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+VKWT+L+IPP ++++N++G+ GFS + W L VFF+FWV+
Sbjct: 77 DTEFGELYMVKWTTLLIPPTTLLIINIVGVVAGFSDALNKGYEAWGPLFSKVFFAFWVIL 256
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV INP
Sbjct: 257 HLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINP 376
>gb|CN519879.1|CN519879 GQ0108.B3_I06 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_I06 5', mRNA sequence
Length = 780
Score = 147 bits (315), Expect = 7e-035
Identities = 53/102 (51%), Positives = 73/102 (71%)
Frame = +2 / +2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWT+L+IPP ++++NL+G+ G S I S W L G +FF+FWV
Sbjct: 137 DEDGDFTELYMFKWTTLLIPPTTLLIINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWV 316
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTI+ VW+ LL+ SLLWV ++P
Sbjct: 317 IIHLYPFLKGLMGRQNRTPTIIVVWSVLLASIFSLLWVRVDP 442
>gb|CN549469.1|CN549469 GQ0241.B3_B20 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_B20 5', mRNA sequence
Length = 839
Score = 147 bits (315), Expect = 7e-035
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+VKWT+L+IPP ++++N++G+ GFS + W L G VFF+ WV+
Sbjct: 196 DTEFGELYMVKWTTLLIPPTTLLIINIVGVVAGFSDALNKGYEAWGPLFGKVFFALWVIL 375
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV INP
Sbjct: 376 HLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINP 495
>gb|CV283069.1|CV283069 WS0186.B21_F15 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0186_F15 3', mRNA sequence
Length = 450
Score = 147 bits (315), Expect = 7e-035
Identities = 54/102 (52%), Positives = 72/102 (70%)
Frame = +2 / -1
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D F +LY+ KWT+L++PP +++VNL+G+ G S I S W L G +FF+FWV
Sbjct: 420 DEDGGFAELYLFKWTTLLVPPTTLLIVNLVGVVAGISHAINSGYQSWGPLFGKLFFAFWV 241
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV ++P
Sbjct: 240 IIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 115
>gb|DT470299.1|DT470299 WS01920.C21_H07 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01920_H07 3', mRNA sequence
Length = 439
Score = 147 bits (315), Expect = 7e-035
Identities = 54/102 (52%), Positives = 72/102 (70%)
Frame = +2 / -2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D F +LY+ KWT+L++PP +++VNL+G+ G S I S W L G +FF+FWV
Sbjct: 420 DEDGGFAELYLFKWTTLLVPPTTLLIVNLVGVVAGISHAINSGYQSWGPLFGKLFFAFWV 241
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV ++P
Sbjct: 240 IIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 115
>gb|AY162181.1| Populus tremuloides cellulose synthase (CesA4) mRNA, complete cds
Length = 3640
Score = 147 bits (315), Expect = 7e-035
Identities = 55/102 (53%), Positives = 73/102 (71%)
Frame = +2 / +1
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWTSL+IPP ++++N++GI G S I S W L G +FF+ WV
Sbjct: 2923 DEDGDFAELYVFKWTSLLIPPTTVIVLNMVGIVAGVSYAINSGYQSWGPLFGKLFFAIWV 3102
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+AHLYPF KGL+GR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 3103 IAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDP 3228
>gb|CA934196.1|CA934196 MTU3TS.P4.D08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 482
Score = 146 bits (313), Expect = 1e-034
Identities = 54/102 (52%), Positives = 72/102 (70%)
Frame = +2 / -2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D + +LY+ KWT+L+IPP +++VNL+G+ G S I S W L G +FF+FWV
Sbjct: 436 DEDGDSAELYLFKWTTLLIPPTTLLIVNLVGVVAGISHAINSGYQSWGPLFGKLFFAFWV 257
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV ++P
Sbjct: 256 IVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 131
>gb|CV242542.1|CV242542 WS02515.B21_F16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02515_F16 3', mRNA sequence
Length = 861
Score = 146 bits (313), Expect = 1e-034
Identities = 55/102 (53%), Positives = 73/102 (71%)
Frame = +2 / -3
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWTSL+IPP ++++N++GI G S I S W L G +FF+ WV
Sbjct: 799 DEDGDFAELYVFKWTSLLIPPTTVILLNMMGIVAGVSFAINSGYQSWGPLFGKLFFAIWV 620
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+AHLYPF KGL+GR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 619 IAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDP 494
>gb|AY055724.2| Populus tremuloides cellulose synthase (CesA5) mRNA, complete cds
Length = 3532
Score = 146 bits (313), Expect = 1e-034
Identities = 54/102 (52%), Positives = 72/102 (70%)
Frame = +2 / +2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D + +LY+ KWT+L+IPP +++VNL+G+ G S I S W L G +FF+FWV
Sbjct: 3113 DEDGDSAELYLFKWTTLLIPPTTLLIVNLVGVVAGISHAINSGYQSWGPLFGKLFFAFWV 3292
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV ++P
Sbjct: 3293 IVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 3418
>gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300021B12F1, mRNA sequence
Length = 655
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D++F +LY KWT+L+IPP I+++NL+G+ G S I + W L G +FF+FWV+
Sbjct: 277 DEDFGELYAFKWTTLLIPPTTILIINLVGVVAGVSDAINNGYQSWGPLFGKLFFAFWVIV 456
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SLLWV I+P
Sbjct: 457 HLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDP 576
>gb|AJ775294.1|AJ775294 AJ775294 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300030F05F1, mRNA sequence
Length = 385
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D++F +LY KWT+L+IPP I+++NL+G+ G S I + W L G +FF+FWV+
Sbjct: 8 DEDFGELYAFKWTTLLIPPTTILIINLVGVVAGVSDAINNGYQSWGPLFGKLFFAFWVIV 187
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SLLWV I+P
Sbjct: 188 HLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDP 307
>gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 882
Score = 145 bits (312), Expect = 2e-034
Identities = 54/100 (54%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D +F +LY+ KWTSL+IPP ++++N++GI G S I S W L G +FF+ WV+A
Sbjct: 550 DGDFAELYVFKWTSLLIPPTTVILLNMVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIA 729
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGL+GR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 730 HLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDP 849
>gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300033F04F1, mRNA sequence
Length = 589
Score = 145 bits (311), Expect = 3e-034
Identities = 53/100 (53%), Positives = 71/100 (71%)
Frame = +2 / +3
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D++F +LY KWT+L+IPP I+++NL+G+ G S I + W L G +FF+FWV+
Sbjct: 132 DEDFGELYAFKWTTLLIPPTTILIINLVGVVAGVSDAINNGYQSWGPLFGKLFFAFWVIV 311
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W LL+ SLLWV I+P
Sbjct: 312 HLYPFLKGLMGRQNRTPTIVVIWXVLLASIFSLLWVRIDP 431
>gb|CV227790.1|CV227790 WS0168.B21_D13 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_D13
3', mRNA sequence
Length = 817
Score = 145 bits (311), Expect = 3e-034
Identities = 55/102 (53%), Positives = 72/102 (70%)
Frame = +2 / -2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWTSL+IPP ++++N++GI G S I S W L G +FF+ WV
Sbjct: 798 DEDGDFAELYVFKWTSLLIPPTTVIVLNMMGIVAGVSFAINSGYQSWGPLFGKLFFAIWV 619
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+AHLYPF KGL+GR RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 618 IAHLYPFLKGLLGRHNRTPTIVIVWSILLASIFSLLWVRIDP 493
>gb|BU817734.1|BU817734 UA20CPD09 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 385
Score = 144 bits (310), Expect = 4e-034
Identities = 54/102 (52%), Positives = 73/102 (71%)
Frame = +2 / +2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWTSL+IPP ++++N++GI G S I S W L G +F++ WV
Sbjct: 32 DEDGDFAELYVFKWTSLLIPPTTVILLNMMGIVAGVSFAINSGYQSWGPLFGKLFYAIWV 211
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+AHLYPF KGL+GR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 212 IAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDP 337
>gb|CV229552.1|CV229552 WS01913.B21_K14 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01913_K14 3', mRNA sequence
Length = 799
Score = 144 bits (309), Expect = 5e-034
Identities = 54/102 (52%), Positives = 72/102 (70%)
Frame = +2 / -1
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWTS +IPP ++++N++GI G S I S W L G +FF+ WV
Sbjct: 799 DEDGDFAELYVFKWTSFLIPPTTVILLNMMGIVAGVSFAINSGYQSWGPLFGKLFFAIWV 620
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+AHLYPF KGL+GR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 619 IAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDP 494
>gb|CF227502.1|CF227502 PtaD6G2G0214 Poplar cDNA library from wood tissues Populus alba x
Populus tremula cDNA 5', mRNA sequence
Length = 747
Score = 143 bits (307), Expect = 9e-034
Identities = 51/98 (52%), Positives = 71/98 (72%)
Frame = +2 / +1
Query: 23 EFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHL 202
+F +LY+ KWT+L+IPP ++++NL+G+ G S I S W L G +FF+FWV+ HL
Sbjct: 13 DFTELYMFKWTTLLIPPTTLLLINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIIHL 192
Query: 203 YPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
YPF KGLMGR+ RTPTI+ VW+ LL+ SLLWV ++P
Sbjct: 193 YPFLKGLMGRQNRTPTIIVVWSVLLASIFSLLWVRVDP 306
>gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 769
Score = 143 bits (307), Expect = 9e-034
Identities = 52/98 (53%), Positives = 71/98 (72%)
Frame = +2 / +3
Query: 23 EFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHL 202
+F +LY+ KWT+L+IPP ++++NL+G+ G S I S W L G +FF+FWV+ HL
Sbjct: 417 DFTELYMFKWTTLLIPPTTLLIINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIIHL 596
Query: 203 YPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
YPF KGLMGR+ RTPTIV VW+ LL+ SLLWV ++P
Sbjct: 597 YPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRVDP 710
>gb|CV282433.1|CV282433 WS0184.B21_J19 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0184_J19 3', mRNA sequence
Length = 573
Score = 143 bits (307), Expect = 9e-034
Identities = 53/98 (54%), Positives = 71/98 (72%)
Frame = +2 / -2
Query: 23 EFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHL 202
+F +LY+ KWTSL+IPP ++++N++GI G S I S W L G +FF+ WV+AHL
Sbjct: 569 DFAELYVFKWTSLLIPPTTVILLNMVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHL 390
Query: 203 YPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
YPF KGL+GR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 389 YPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDP 276
>gb|AY573575.1| Populus tremula x Populus tremuloides cellulose synthase (CesA4)
mRNA, complete cds
Length = 3778
Score = 143 bits (306), Expect = 1e-033
Identities = 52/100 (52%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LYI KWTSL+IPP ++++N++G+ VG S I + W L G +FF+ WV+
Sbjct: 3136 DGEFSELYIFKWTSLLIPPTTLLIMNIVGVVVGVSDAINNGYDSWGPLFGRLFFALWVIL 3315
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGL+G++ R PTI+ VW+ LLS ++LLWV INP
Sbjct: 3316 HLYPFLKGLLGKQDRMPTIILVWSILLSSILTLLWVRINP 3435
>gb|AY162180.1| Populus tremuloides cellulose synthase (CesA7) mRNA, complete cds
Length = 3809
Score = 143 bits (306), Expect = 1e-033
Identities = 52/100 (52%), Positives = 72/100 (72%)
Frame = +2 / +3
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LYI KWTSL+IPP ++++N++G+ VG S I + W L G +FF+ WV+
Sbjct: 3102 DGEFSELYIFKWTSLLIPPTTLLIMNIVGVVVGVSDAINNGYDSWGPLFGRLFFALWVIL 3281
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGL+G++ R PTI+ VW+ LLS ++LLWV INP
Sbjct: 3282 HLYPFLKGLLGKQDRMPTIILVWSILLSSILTLLWVRINP 3401
>gb|CK087778.1|CK087778 A020P56.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A020P56 3', mRNA sequence
Length = 826
Score = 142 bits (305), Expect = 2e-033
Identities = 51/100 (51%), Positives = 73/100 (73%)
Frame = +2 / -2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+ KWTSL+IPP+ ++++N+IG+ VG S I + W L G +FF+ WV+
Sbjct: 621 DGEFSELYLFKWTSLLIPPMTLLIINIIGVVVGISDAINNGYETWGPLFGKLFFALWVIV 442
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGL+G++ R PTI+ VW+ LL+ ++LLWV INP
Sbjct: 441 HLYPFLKGLIGKQHRLPTIIVVWSILLASVLTLLWVRINP 322
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 294,676,103
Number of Sequences: 369679
Number of extensions: 4065536
Number of successful extensions: 48244
Number of sequences better than 1.0e-020: 142
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 7831881440
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)