TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478084.2.1
(1395 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT497461.1|DT497461 WS01126.BR_I18 PT-P-FL-A-2 Populus t... 221 e-109
gb|DT478365.1|DT478365 WS02522.BR_J09 PT-MB-N-A-15 Populus ... 221 3e-091
gb|CV226722.1|CV226722 WS0165.B21_B13 PT-DX-A-7 Populus tri... 220 2e-085
gb|CK111170.1|CK111170 Q010A12 Populus dormant bud cDNA lib... 134 1e-083
gb|CV226701.1|CV226701 WS0165.B21_A13 PT-DX-A-7 Populus tri... 219 6e-082
gb|DT516609.1|DT516609 WS02431.B21_O10 PTxD-ICC-N-A-14 Popu... 223 4e-077
gb|DT477959.1|DT477959 WS02521.BR_H11 PT-MB-N-A-15 Populus ... 221 8e-076
gb|BP930386.1|BP930386 BP930386 full-length enriched poplar... 222 3e-073
gb|DT482206.1|DT482206 WS02519.B21_D02 PT-MB-N-A-15 Populus... 223 3e-069
gb|AJ779170.1|AJ779170 AJ779170 Populus euphratica cambium ... 142 2e-067
gb|CV228445.1|CV228445 WS01910.B21_C07 PT-DX-N-A-10 Populus... 223 5e-067
gb|CX655152.1|CX655152 PO02030F04 Poplar SC cDNA library Po... 111 7e-065
gb|CN550416.1|CN550416 GQ0242.B3_H08 GQ024 Populus trichoca... 217 3e-062
gb|CV254084.1|CV254084 WS0223.B21_P12 PTxD-ICC-A-12 Populus... 221 9e-060
gb|CV229096.1|CV229096 WS01912.B21_D11 PT-DX-N-A-10 Populus... 223 1e-059
gb|CV232764.1|CV232764 WS0198.B21_J13 PT-DX-N-A-10 Populus ... 223 1e-059
gb|CV261946.1|CV261946 WS02018.B21_D13 PTxN-IB-N-A-11 Popul... 208 4e-058
gb|BP935415.1|BP935415 BP935415 full-length enriched poplar... 224 9e-058
gb|DT521811.1|DT521811 WS02035.B21_E16 PTxN-IB-N-A-11 Popul... 223 2e-057
gb|CV250147.1|CV250147 WS01126.B21_I18 PT-P-FL-A-2 Populus ... 221 1e-056
gb|BU894854.1|BU894854 X016A06 Populus wood cDNA library Po... 220 2e-056
gb|BU870237.1|BU870237 Q010B24 Populus flower cDNA library ... 108 3e-056
gb|BU791132.1|BU791132 pni127 Poplar limiting vs. luxuriant... 159 1e-055
gb|BI138216.1|BI138216 F101P32Y Populus flower cDNA library... 215 7e-055
gb|BP936352.1|BP936352 BP936352 full-length enriched poplar... 204 1e-052
gb|CV240628.1|CV240628 WS0251.B21_O13 PT-MB-N-A-15 Populus ... 206 2e-052
gb|CF228426.1|CF228426 PtaXM0012H11H1115 Poplar cDNA librar... 206 3e-052
gb|CA932240.1|CA932240 MTU5CS.P10.D12 Aspen stem cDNA Libra... 100 6e-050
gb|CV229337.1|CV229337 WS01912.B21_P14 PT-DX-N-A-10 Populus... 192 4e-048
gb|BU894150.1|BU894150 X003E10 Populus wood cDNA library Po... 188 7e-047
gb|BU897564.1|BU897564 X059F08 Populus wood cDNA library Po... 111 2e-043
gb|CF233880.1|CF233880 PtaJXO0028F5F0511 Poplar cDNA librar... 109 7e-042
gb|DT488651.1|DT488651 WS02537.B21_A15 PT-MB-N-A-15 Populus... 102 5e-041
gb|CV252228.1|CV252228 PX0011.B21_A01 PT-X-FL-A-1 Populus t... 158 9e-038
gb|CF233931.1|CF233931 PtaJXO0029D10D1008 Poplar cDNA libra... 111 2e-036
gb|CX187407.1|CX187407 F11_45-40_11.ab1 leaf inoculated wit... 148 1e-034
gb|BU814291.1|BU814291 N027E03 Populus bark cDNA library Po... 145 5e-034
gb|DT477172.1|DT477172 WS02519.BR_D02 PT-MB-N-A-15 Populus ... 105 8e-033
gb|CV274818.1|CV274818 WS0174.B21.1_H17 PTxD-NR-A-8 Populus... 81 2e-032
gb|CV130738.1|CV130738 B9SP09h11 Populus stem seasonal libr... 68 3e-032
gb|CV276909.1|CV276909 WS0142.B21_C04 PTxD-IL-A-5 Populus t... 139 3e-032
gb|BI129975.1|BI129975 G098P36Y Populus cambium cDNA librar... 139 4e-032
gb|CA929350.1|CA929350 MTU2CA.P12.E02 Aspen apex cDNA Libra... 96 1e-028
gb|BU868690.1|BU868690 M120A01 Populus flower cDNA library ... 90 3e-028
gb|CA924248.1|CA924248 MTU7CL.P3.E04 Aspen leaf cDNA Librar... 90 3e-028
gb|CA924273.1|CA924273 MTU7CL.P3.G09 Aspen leaf cDNA Librar... 90 3e-028
gb|CV228649.1|CV228649 WS01910.B21_M23 PT-DX-N-A-10 Populus... 125 6e-028
gb|CK113704.1|CK113704 UR110TH03 Populus root cDNA library ... 66 2e-026
gb|BU874212.1|BU874212 Q065E06 Populus flower cDNA library ... 106 8e-026
gb|BU815877.1|BU815877 N047G11 Populus bark cDNA library Po... 118 9e-026
gb|BI139313.1|BI139313 F129P21Y Populus flower cDNA library... 105 6e-024
gb|BU894091.1|BU894091 X002B11 Populus wood cDNA library Po... 109 4e-023
gb|BU896544.1|BU896544 X042C01 Populus wood cDNA library Po... 107 2e-022
gb|CA923633.1|CA923633 MTU7CL.P13.A10 Aspen leaf cDNA Libra... 82 3e-022
gb|DT523625.1|DT523625 WS02040.B21_D07 PTxN-IB-N-A-11 Popul... 55 5e-021
gb|AI165189.1|AI165189 A078P11U Hybrid aspen plasmid librar... 90 7e-021
>gb|DT497461.1|DT497461 WS01126.BR_I18 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_I18 5', mRNA sequence
Length = 941
Score = 221 bits (476), Expect(3) = e-109
Identities = 87/107 (81%), Positives = 97/107 (90%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I +L RMD+ Y RSALD+LELQPDLSALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 520 IHDSLVRMDNDYLRSALDFLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGR 699
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYD 283
P+FMGPGGIAYEGL+F++PS+ DGSLSVAISLQAEHM+ F K IYD
Sbjct: 700 PIFMGPGGIAYEGLSFIIPSSTNDGSLSVAISLQAEHMKLFEKFIYD 840
Score = 111 bits (236), Expect(3) = e-109
Identities = 48/81 (59%), Positives = 58/81 (71%)
Frame = -3 / +1
Query: 910 TAVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCA 731
TAV+IFKL+R +L L+++ +S+Y +LA HVWR A ARGLP DQ TKLY A
Sbjct: 211 TAVSIFKLTRDQLNTLKAKAKEGGNNIGYSSYEMLAGHVWRSACKARGLPDDQETKLYIA 390
Query: 730 TDGRQRLQPPLPEGYFGNVIF 668
TDGR RL+P LP GYFGNVIF
Sbjct: 391 TDGRSRLRPTLPPGYFGNVIF 453
Score = 104 bits (221), Expect(3) = e-109
Identities = 37/58 (63%), Positives = 46/58 (79%)
Frame = -3 / +1
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
QHH A GFSGLHF+N+W+D+ RG+ + PFIDR+LLRARDPP + H+EYQP PAM
Sbjct: 4 QHHAADGFSGLHFVNTWSDMARGLDLTIPPFIDRTLLRARDPPQAAFHHVEYQPPPAM 177
Score = 79.9 bits (168), Expect(4) = 1e-036
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = +2 / -1
Query: 422 GRPHPKSASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSN 592
G P PKSASW+G TQLV PR GHR V APRT AD+SG SSR S AD + S+R+N
Sbjct: 701 GLPQPKSASWIGSLTQLVIPRFGHRKVWAPRTRADKSG*SSRKSRADLR*SLSMRTN 531
Score = 58.3 bits (121), Expect(4) = 1e-036
Identities = 28/57 (49%), Positives = 28/57 (49%)
Frame = +3 / -1
Query: 963 MAGAGWYSMCG*PGVGGSRARRSDRSMKGMPAIGTPRQRSAHELMKCSPEKPPATWC 1133
MAG GWYS GGS ARR SMKG PR S H K PE P A WC
Sbjct: 176 MAGGGWYSTWWNAAWGGSLARRRVLSMKGGIVRSRPRAISDHVFTKWRPENPSAAWC 6
Score = 42.3 bits (86), Expect(4) = 1e-036
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2 / -1
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALG 370
++F N MCSAC +MATD+LPS + LG
Sbjct: 833 INFSNSFMCSACKDMATDKLPSFVELG 753
Score = 36.8 bits (74), Expect(4) = 1e-036
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2 / -3
Query: 668 KDHVAEVALRKRRLQPLPPVRGAVQLGGLVGRQAARQGRAPPHVRRQHSV 817
KD++A+V KRR Q P + + LG L+ R++A P+V RQH +
Sbjct: 453 KDYIAKVTRWKRRAQS*PTICSYI*LGFLIIRKSACLTC*SPYVTRQHFI 304
>gb|DT478365.1|DT478365 WS02522.BR_J09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02522_J09 5', mRNA sequence
Length = 870
Score = 221 bits (476), Expect(3) = 3e-091
Identities = 87/107 (81%), Positives = 97/107 (90%)
Frame = -1 / +2
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I +L RMD+ Y RSALD+LELQPDLSALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 413 IHDSLVRMDNDYLRSALDFLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGR 592
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYD 283
P+FMGPGGIAYEGL+F++PS+ DGSLSVAISLQAEHM+ F K IYD
Sbjct: 593 PIFMGPGGIAYEGLSFIIPSSTNDGSLSVAISLQAEHMKLFEKFIYD 733
Score = 111 bits (236), Expect(3) = 3e-091
Identities = 48/81 (59%), Positives = 58/81 (71%)
Frame = -3 / +2
Query: 910 TAVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCA 731
TAV+IFKL+R +L L+++ +S+Y +LA HVWR A ARGLP DQ TKLY A
Sbjct: 104 TAVSIFKLTRDQLNTLKAKAKEGGNNIGYSSYEMLAGHVWRSACKARGLPDDQETKLYIA 283
Query: 730 TDGRQRLQPPLPEGYFGNVIF 668
TDGR RL+P LP GYFGNVIF
Sbjct: 284 TDGRSRLRPTLPPGYFGNVIF 346
Score = 79.9 bits (168), Expect(4) = 2e-028
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = +2 / -1
Query: 422 GRPHPKSASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSN 592
G P PKSASW+G TQLV PR GHR V APRT AD+SG SSR S AD + S+R+N
Sbjct: 594 GLPQPKSASWIGSLTQLVIPRFGHRKVWAPRTRADKSG*SSRKSRADLR*SLSMRTN 424
Score = 44.1 bits (90), Expect(3) = 3e-091
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3 / +2
Query: 1030 LLRARDPPTPGYPHIEYQPAPAM 962
LLRARDPP P + H+EYQ PAM
Sbjct: 2 LLRARDPPQPAFYHVEYQAPPAM 70
Score = 42.3 bits (86), Expect(4) = 2e-028
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2 / -1
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALG 370
++F N MCSAC +MATD+LPS + LG
Sbjct: 726 INFSNSFMCSACKDMATDKLPSFVELG 646
Score = 36.8 bits (74), Expect(4) = 2e-028
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2 / -3
Query: 668 KDHVAEVALRKRRLQPLPPVRGAVQLGGLVGRQAARQGRAPPHVRRQHSV 817
KD++A+V KRR Q P + + LG L+ R++A P+V RQH +
Sbjct: 346 KDYIAKVTRWKRRAQS*PTICSYI*LGFLIIRKSACLTC*SPYVTRQHFI 197
Score = 30.4 bits (60), Expect(4) = 2e-028
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +3 / -1
Query: 963 MAGAGWYSMCG*PGVGGSRARRS 1031
MAG WYS G GGS ARRS
Sbjct: 69 MAGGAWYSTW*NAGWGGSLARRS 1
>gb|CV226722.1|CV226722 WS0165.B21_B13 PT-DX-A-7 Populus trichocarpa cDNA clone WS0165_B13
3', mRNA sequence
Length = 948
Score = 220 bits (475), Expect(3) = 2e-085
Identities = 87/109 (79%), Positives = 98/109 (89%)
Frame = -1 / +3
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I +L RMD+ Y RSALD+LELQPDLSALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 381 IHDSLVRMDNDYLRSALDFLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGR 560
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF* 277
P+FMGPGGIAYEGL+F++PS+ DGS+SVAISLQAEHM+ F K IYD *
Sbjct: 561 PIFMGPGGIAYEGLSFIIPSSTNDGSMSVAISLQAEHMKLFEKFIYDI* 707
Score = 109 bits (233), Expect(3) = 2e-085
Identities = 47/81 (58%), Positives = 58/81 (71%)
Frame = -3 / +3
Query: 910 TAVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCA 731
TAV+IFKL++ +L L+++ +S+Y +LA HVWR A ARGLP DQ TKLY A
Sbjct: 72 TAVSIFKLTKDQLNTLKAKAKEGGNNIGYSSYEMLAGHVWRSACKARGLPDDQETKLYIA 251
Query: 730 TDGRQRLQPPLPEGYFGNVIF 668
TDGR RL+P LP GYFGNVIF
Sbjct: 252 TDGRSRLRPTLPPGYFGNVIF 314
Score = 79.9 bits (168), Expect(3) = 2e-026
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = +2 / -3
Query: 422 GRPHPKSASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSN 592
G P PKSASW+G TQLV PR GHR V APRT AD+SG SSR S AD + S+R+N
Sbjct: 562 GLPQPKSASWIGSLTQLVIPRFGHRKVWAPRTRADKSG*SSRKSRADLR*SLSMRTN 392
Score = 40.9 bits (83), Expect(3) = 2e-026
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2 / -3
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALG 370
++F N MCSAC +MATD LPS + LG
Sbjct: 694 INFSNSFMCSACKDMATDMLPSFVELG 614
Score = 36.8 bits (74), Expect(3) = 2e-026
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2 / -2
Query: 668 KDHVAEVALRKRRLQPLPPVRGAVQLGGLVGRQAARQGRAPPHVRRQHSV 817
KD++A+V KRR Q P + + LG L+ R++A P+V RQH +
Sbjct: 314 KDYIAKVTRWKRRAQS*PTICSNI*LGFLIIRKSACLTC*SPYVTRQHFI 165
Score = 26.3 bits (51), Expect(3) = 2e-085
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3 / +3
Query: 997 YPHIEYQPAPAM 962
+ H+EYQP PAM
Sbjct: 3 FHHVEYQPPPAM 38
>gb|CK111170.1|CK111170 Q010A12 Populus dormant bud cDNA library Populus tremula cDNA clone
Q010A12 5', mRNA sequence
Length = 775
Score = 134 bits (288), Expect(3) = 1e-083
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = -1 / +2
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I +L RMD+ Y RSALD+LELQPDL+ALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 521 IHDSLVRMDNDYLRSALDFLELQPDLTALVRGAHTFRCPNLGITSWVRLPIHDADFGWGR 700
Query: 423 PVFMG 409
P+ G
Sbjct: 701 PLLWG 715
Score = 108 bits (230), Expect(3) = 1e-083
Identities = 47/81 (58%), Positives = 57/81 (70%)
Frame = -3 / +2
Query: 910 TAVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCA 731
TAV+I KL+R +L L+++ +S+Y +LA HVWR A ARGLP DQ TKLY A
Sbjct: 212 TAVSILKLTRDQLNTLKAKAKEGGNNIGYSSYEMLAGHVWRSACKARGLPDDQETKLYIA 391
Query: 730 TDGRQRLQPPLPEGYFGNVIF 668
TDGR RL+P LP GYFGNVIF
Sbjct: 392 TDGRSRLRPTLPPGYFGNVIF 454
Score = 107 bits (229), Expect(3) = 1e-083
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / +2
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
QHH A GFSGLHF+N+W+D+ RG+ + PFIDR+LLRARDPP P + H+EYQP PAM
Sbjct: 5 QHHAADGFSGLHFVNTWSDMARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPPPAM 178
Score = 79.0 bits (166), Expect(2) = 4e-025
Identities = 37/57 (64%), Positives = 41/57 (71%)
Frame = +2 / -2
Query: 422 GRPHPKSASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSN 592
G P PKSASW+G TQLV PRLGHR V APRT A RSG SSR S AD + S+R+N
Sbjct: 702 GLPQPKSASWIGSLTQLVIPRLGHRKVWAPRTRAVRSG*SSRKSRADLR*SLSMRTN 532
Score = 60.2 bits (125), Expect(2) = 4e-025
Identities = 29/57 (50%), Positives = 29/57 (50%)
Frame = +3 / -2
Query: 963 MAGAGWYSMCG*PGVGGSRARRSDRSMKGMPAIGTPRQRSAHELMKCSPEKPPATWC 1133
MAG GWYS G GGS ARR SMKG PR S H K PE P A WC
Sbjct: 177 MAGGGWYSTWWNAGWGGSLARRRVLSMKGGIVRSRPRAISDHVFTK*RPENPSAAWC 7
>gb|CV226701.1|CV226701 WS0165.B21_A13 PT-DX-A-7 Populus trichocarpa cDNA clone WS0165_A13
3', mRNA sequence
Length = 904
Score = 219 bits (473), Expect(2) = 6e-082
Identities = 91/130 (70%), Positives = 103/130 (79%)
Frame = -1 / -3
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMD+ Y +SALDYLELQPDLSALVRGAH+F+CPNLG+TSWVRLPIHDADFGWGR
Sbjct: 542 IHDALVRMDNDYLKSALDYLELQPDLSALVRGAHSFQCPNLGITSWVRLPIHDADFGWGR 363
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTPPHKSSVP 244
P+FMGPGGIAYEGL+F+LPS DGS+SVAISLQA+HM+ F + IYD * P SS
Sbjct: 362 PIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQAQHMKLFEEFIYDI*LNEPRLSSSRG 183
Query: 243 VRATQRSKRP 214
R RP
Sbjct: 182 FRPPFSKTRP 153
Score = 106 bits (226), Expect(2) = 6e-082
Identities = 47/81 (58%), Positives = 55/81 (67%)
Frame = -3 / -3
Query: 910 TAVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCA 731
TAV+IFKLSR +L L+++ +S+Y +LAAHVWR AR LP DQ TKLY A
Sbjct: 851 TAVSIFKLSRDQLSTLKAKAKEDGNNISYSSYEMLAAHVWRSTCKARELPDDQETKLYIA 672
Query: 730 TDGRQRLQPPLPEGYFGNVIF 668
TDGR R P LP GYFGNVIF
Sbjct: 671 TDGRSRWHPQLPPGYFGNVIF 609
>gb|DT516609.1|DT516609 WS02431.B21_O10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02431_O10 3', mRNA sequence
Length = 926
Score = 223 bits (481), Expect(2) = 4e-077
Identities = 93/130 (71%), Positives = 103/130 (79%)
Frame = -1 / -1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMD+ Y +SALDYLELQPDLSALVRGAH+FRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 674 IHDALVRMDNDYLKSALDYLELQPDLSALVRGAHSFRCPNLGITSWVRLPIHDADFGWGR 495
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTPPHKSSVP 244
P+FMGPGGIAYEGL+F+LPS DGS+SVAISLQA+HM+ F K IYD * P SS
Sbjct: 494 PIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQAQHMKLFEKFIYDI*LNEPRLSSSRG 315
Query: 243 VRATQRSKRP 214
R RP
Sbjct: 314 FRPPFSKTRP 285
Score = 86.8 bits (183), Expect(2) = 4e-077
Identities = 36/53 (67%), Positives = 39/53 (73%)
Frame = -3 / -1
Query: 826 FSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
+S+Y +LAAHVWR AR L DQ TKLY ATDGR R QP LP GYFGNVIF
Sbjct: 899 YSSYEMLAAHVWRSTCKARELXDDQETKLYIATDGRSRWQPQLPPGYFGNVIF 741
>gb|DT477959.1|DT477959 WS02521.BR_H11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02521_H11 5', mRNA sequence
Length = 848
Score = 221 bits (476), Expect(2) = 8e-076
Identities = 87/107 (81%), Positives = 97/107 (90%)
Frame = -1 / -1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I +L RMD+ Y RSALD+LELQPDLSALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 635 IHDSLVRMDNDYLRSALDFLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGR 456
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYD 283
P+FMGPGGIAYEGL+F++PS+ DGSLSVAISLQAEHM+ F K IYD
Sbjct: 455 PIFMGPGGIAYEGLSFIIPSSTNDGSLSVAISLQAEHMKLFEKFIYD 315
Score = 84.5 bits (178), Expect(2) = 8e-076
Identities = 35/48 (72%), Positives = 37/48 (77%)
Frame = -3 / -1
Query: 811 VLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
+LA HVWR A ARGL DQ TKLY ATDGR RL+P LP GYFGNVIF
Sbjct: 845 MLAGHVWRSACKARGLLDDQETKLYIATDGRSRLRPTLPPGYFGNVIF 702
Score = 79.9 bits (168), Expect(3) = 3e-026
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = +2 / +1
Query: 422 GRPHPKSASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSN 592
G P PKSASW+G TQLV PR GHR V APRT AD+SG SSR S AD + S+R+N
Sbjct: 454 GLPQPKSASWIGSLTQLVIPRFGHRKVWAPRTRADKSG*SSRKSRADLR*SLSMRTN 624
Score = 42.3 bits (86), Expect(3) = 3e-026
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2 / +1
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALG 370
++F N MCSAC +MATD+LPS + LG
Sbjct: 322 INFSNSFMCSACKDMATDKLPSFVELG 402
Score = 35.0 bits (70), Expect(3) = 3e-026
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2 / +3
Query: 668 KDHVAEVALRKRRLQPLPPVRGAVQLGGLVGRQAARQGRAPPHVRRQH 811
KD++A+V KRR Q P + + LG L+ +++A P+V RQH
Sbjct: 702 KDYIAKVTRWKRRAQS*PTICSYI*LGFLIIKKSACLTC*SPYVTRQH 845
>gb|BP930386.1|BP930386 BP930386 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-009_E13.r 3', mRNA sequence
Length = 615
Score = 222 bits (479), Expect(2) = 3e-073
Identities = 88/113 (77%), Positives = 99/113 (87%)
Frame = -1 / -2
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I +L RMD+ Y RSALD+LELQPDLSALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 425 IHDSLVRMDNDYLRSALDFLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGR 246
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTP 265
P+FMGPGGIAYEGL+F++PS+ DGS+SVAISLQAEHM+ F K IYD * P
Sbjct: 245 PIFMGPGGIAYEGLSFIIPSSTNDGSMSVAISLQAEHMKLFEKFIYDI*QNEP 87
Score = 79.9 bits (168), Expect(3) = 3e-024
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = +2 / +1
Query: 422 GRPHPKSASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSN 592
G P PKSASW+G TQLV PR GHR V APRT AD+SG SSR S AD + S+R+N
Sbjct: 244 GLPQPKSASWIGSLTQLVIPRFGHRKVWAPRTRADKSG*SSRKSRADLR*SLSMRTN 414
Score = 74.4 bits (156), Expect(2) = 3e-073
Identities = 31/41 (75%), Positives = 32/41 (78%)
Frame = -3 / -2
Query: 790 RCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
R A ARGLP DQ TKLY ATDGR RL+P LP GYFGNVIF
Sbjct: 614 RSACKARGLPDDQETKLYIATDGRSRLRPTLPPGYFGNVIF 492
Score = 40.9 bits (83), Expect(3) = 3e-024
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALG 370
++F N MCSAC +MATD LPS + LG
Sbjct: 112 INFSNSFMCSACKDMATDMLPSFVELG 192
Score = 29.5 bits (58), Expect(3) = 3e-024
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2 / +3
Query: 668 KDHVAEVALRKRRLQPLPPVRGAVQLGGLVGRQAA 772
KD++A+V KRR Q P + + LG L+ R++A
Sbjct: 492 KDYIAKVTRWKRRAQS*PTICSNI*LGFLIIRKSA 596
>gb|DT482206.1|DT482206 WS02519.B21_D02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02519_D02 3', mRNA sequence
Length = 840
Score = 223 bits (481), Expect(2) = 3e-069
Identities = 93/130 (71%), Positives = 103/130 (79%)
Frame = -1 / -1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMD+ Y +SALDYLELQPDLSALVRGAH+FRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 681 IHDALVRMDNDYLKSALDYLELQPDLSALVRGAHSFRCPNLGITSWVRLPIHDADFGWGR 502
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTPPHKSSVP 244
P+FMGPGGIAYEGL+F+LPS DGS+SVAISLQA+HM+ F K IYD * P SS
Sbjct: 501 PIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQAQHMKLFEKFIYDI*LNEPRLSSSRG 322
Query: 243 VRATQRSKRP 214
R RP
Sbjct: 321 FRPPFSKTRP 292
Score = 60.2 bits (125), Expect(2) = 3e-069
Identities = 24/30 (80%), Positives = 24/30 (80%)
Frame = -3 / -1
Query: 757 DQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
DQ TKLY ATDGR R QP LP GYFGNVIF
Sbjct: 837 DQETKLYIATDGRSRWQPQLPPGYFGNVIF 748
>gb|AJ779170.1|AJ779170 AJ779170 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600012G06F1, mRNA sequence
Length = 610
Score = 142 bits (305), Expect(3) = 2e-067
Identities = 55/66 (83%), Positives = 60/66 (90%)
Frame = -1 / +2
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I +L MD+ Y RSALD+LELQPDLSALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 413 IHDSLVLMDNDYLRSALDFLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGR 592
Query: 423 PVFMGP 406
P+FMGP
Sbjct: 593 PIFMGP 610
Score = 111 bits (236), Expect(3) = 2e-067
Identities = 48/81 (59%), Positives = 58/81 (71%)
Frame = -3 / +2
Query: 910 TAVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCA 731
TAV+IFKL+R +L L+++ +S+Y +LA HVWR A ARGLP DQ TKLY A
Sbjct: 104 TAVSIFKLTRDQLNTLKAKAKEGGNNIGYSSYEMLAGHVWRSACQARGLPDDQETKLYIA 283
Query: 730 TDGRQRLQPPLPEGYFGNVIF 668
TDGR RL+P LP GYFGNVIF
Sbjct: 284 TDGRSRLRPTLPPGYFGNVIF 346
Score = 42.3 bits (86), Expect(3) = 2e-067
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -3 / +2
Query: 1018 RDPPTPGYPHIEYQPAPAMLSEP 950
RDPP P + H+EYQP PAM + P
Sbjct: 14 RDPPQPAFHHVEYQPPPAMKTVP 82
>gb|CV228445.1|CV228445 WS01910.B21_C07 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01910_C07 3', mRNA sequence
Length = 791
Score = 223 bits (481), Expect(2) = 5e-067
Identities = 93/130 (71%), Positives = 103/130 (79%)
Frame = -1 / -1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMD+ Y +SALDYLELQPDLSALVRGAH+FRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 632 IHDALVRMDNDYLKSALDYLELQPDLSALVRGAHSFRCPNLGITSWVRLPIHDADFGWGR 453
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTPPHKSSVP 244
P+FMGPGGIAYEGL+F+LPS DGS+SVAISLQA+HM+ F K IYD * P SS
Sbjct: 452 PIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQAQHMKLFEKFIYDI*LNEPRLSSSRG 273
Query: 243 VRATQRSKRP 214
R RP
Sbjct: 272 FRPPFSKTRP 243
Score = 52.8 bits (109), Expect(2) = 5e-067
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = -3 / -1
Query: 757 DQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
DQ TKLY ATD R QP LP GYFGNVIF
Sbjct: 788 DQETKLYIATDVGSRWQPQLPPGYFGNVIF 699
>gb|CX655152.1|CX655152 PO02030F04 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02030F04 5', mRNA sequence
Length = 628
Score = 111 bits (237), Expect(3) = 7e-065
Identities = 48/81 (59%), Positives = 58/81 (71%)
Frame = -3 / +1
Query: 910 TAVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCA 731
TAV+IFKL+R +L L+++ +S+Y +LA HVWR A ARGLP DQ TKLY A
Sbjct: 157 TAVSIFKLTRDQLNTLKAKAKEGGNIIGYSSYEMLAGHVWRSACKARGLPDDQETKLYIA 336
Query: 730 TDGRQRLQPPLPEGYFGNVIF 668
TDGR RL+P LP GYFGNVIF
Sbjct: 337 TDGRSRLRPTLPPGYFGNVIF 399
Score = 107 bits (228), Expect(3) = 7e-065
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDA 442
I +L RMD+ Y RSALD+L+LQPDL+ALVRGAHTFRCPNLG+T+WVRLPIHDA
Sbjct: 466 IHDSLVRMDNDYLRSALDFLKLQPDLTALVRGAHTFRCPNLGITNWVRLPIHDA 627
Score = 68.9 bits (144), Expect(3) = 7e-065
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = -3 / +1
Query: 1084 ADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
+D+ RG+ + PFIDR+LLRARDPP P + H+EYQP PAM
Sbjct: 1 SDMARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPPPAM 123
>gb|CN550416.1|CN550416 GQ0242.B3_H08 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0242_H08 5', mRNA sequence
Length = 670
Score = 217 bits (469), Expect(2) = 3e-062
Identities = 90/130 (69%), Positives = 102/130 (78%)
Frame = -1 / +2
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMD+ Y + ALDYLELQPDLSALVRGAH+F+CPNLG+TSWVRLPIHDADFGWGR
Sbjct: 131 IHDALVRMDNDYLKXALDYLELQPDLSALVRGAHSFQCPNLGITSWVRLPIHDADFGWGR 310
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTPPHKSSVP 244
P+FMGPGGIAYEGL+F+LPS DGS+SVAISLQA+HM+ F + IYD * P SS
Sbjct: 311 PIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQAQHMKLFEEFIYDI*LNEPRLSSSRG 490
Query: 243 VRATQRSKRP 214
R RP
Sbjct: 491 FRPPFSKTRP 520
Score = 42.3 bits (86), Expect(2) = 3e-062
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -3 / +2
Query: 730 TDGRQRLQPPLPEGYFGNVIF 668
TDGR R P LP GYFGNVIF
Sbjct: 2 TDGRSRWHPQLPPGYFGNVIF 64
>gb|CV254084.1|CV254084 WS0223.B21_P12 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0223_P12 3', mRNA sequence
Length = 747
Score = 221 bits (476), Expect(2) = 9e-060
Identities = 87/107 (81%), Positives = 97/107 (90%)
Frame = -1 / -1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I +L RMD+ Y RSALD+LELQPDLSALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 630 IHDSLVRMDNDYLRSALDFLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGR 451
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYD 283
P+FMGPGGIAYEGL+F++PS+ DGSLSVAISLQAEHM+ F K IYD
Sbjct: 450 PIFMGPGGIAYEGLSFIIPSSTNDGSLSVAISLQAEHMKLFEKFIYD 310
Score = 79.9 bits (168), Expect(2) = 4e-021
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = +2 / +2
Query: 422 GRPHPKSASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSN 592
G P PKSASW+G TQLV PR GHR V APRT AD+SG SSR S AD + S+R+N
Sbjct: 449 GLPQPKSASWIGSLTQLVIPRFGHRKVWAPRTRADKSG*SSRKSRADLR*SLSMRTN 619
Score = 42.3 bits (86), Expect(2) = 4e-021
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2 / +2
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALG 370
++F N MCSAC +MATD+LPS + LG
Sbjct: 317 INFSNSFMCSACKDMATDKLPSFVELG 397
Score = 30.9 bits (61), Expect(2) = 9e-060
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3 / -2
Query: 715 RLQPPLPEGYFGNV 674
RL+P LP GYFGNV
Sbjct: 743 RLRPTLPPGYFGNV 702
>gb|CV229096.1|CV229096 WS01912.B21_D11 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01912_D11 3', mRNA sequence
Length = 750
Score = 223 bits (481), Expect(2) = 1e-059
Identities = 93/130 (71%), Positives = 103/130 (79%)
Frame = -1 / -1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMD+ Y +SALDYLELQPDLSALVRGAH+FRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 648 IHDALVRMDNDYLKSALDYLELQPDLSALVRGAHSFRCPNLGITSWVRLPIHDADFGWGR 469
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTPPHKSSVP 244
P+FMGPGGIAYEGL+F+LPS DGS+SVAISLQA+HM+ F K IYD * P SS
Sbjct: 468 PIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQAQHMKLFEKFIYDI*LNEPRLSSSRG 289
Query: 243 VRATQRSKRP 214
R RP
Sbjct: 288 FRPPFSKTRP 259
Score = 28.1 bits (55), Expect(2) = 1e-059
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 700 LPEGYFGNVIF 668
LP GYFGNVIF
Sbjct: 747 LPPGYFGNVIF 715
>gb|CV232764.1|CV232764 WS0198.B21_J13 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0198_J13 3', mRNA sequence
Length = 725
Score = 223 bits (481), Expect(2) = 1e-059
Identities = 93/130 (71%), Positives = 103/130 (79%)
Frame = -1 / -2
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMD+ Y +SALDYLELQPDLSALVRGAH+FRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 625 IHDALVRMDNDYLKSALDYLELQPDLSALVRGAHSFRCPNLGITSWVRLPIHDADFGWGR 446
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTPPHKSSVP 244
P+FMGPGGIAYEGL+F+LPS DGS+SVAISLQA+HM+ F K IYD * P SS
Sbjct: 445 PIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQAQHMKLFEKFIYDI*LNEPRLSSSRG 266
Query: 243 VRATQRSKRP 214
R RP
Sbjct: 265 FRPPFSKTRP 236
Score = 28.1 bits (55), Expect(2) = 1e-059
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -2
Query: 700 LPEGYFGNVIF 668
LP GYFGNVIF
Sbjct: 724 LPPGYFGNVIF 692
>gb|CV261946.1|CV261946 WS02018.B21_D13 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02018_D13 3', mRNA sequence
Length = 686
Score = 208 bits (449), Expect(2) = 4e-058
Identities = 84/113 (74%), Positives = 95/113 (84%)
Frame = -1 / -3
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I +L RM + Y RSALD+LELQPDLSALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 564 IHDSLVRMANDYLRSALDFLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGR 385
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTP 265
P+FMGPGGIAYEGL+F++PS+ DGS+SVAIS QAE M+ F K IY * P
Sbjct: 384 PIFMGPGGIAYEGLSFIIPSSTNDGSMSVAISFQAEPMKLFEKFIYAI*QNEP 226
Score = 37.7 bits (76), Expect(2) = 4e-058
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -3 / -3
Query: 721 RQRLQPPLPEGYFGNVIF 668
R RL+P LP GYFGNVIF
Sbjct: 684 RSRLRPTLPPGYFGNVIF 631
>gb|BP935415.1|BP935415 BP935415 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-076_P10.r 3', mRNA sequence
Length = 464
Score = 224 bits (484), Expect = 9e-058
Identities = 89/113 (78%), Positives = 99/113 (87%)
Frame = -1 / -3
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I +L RMDD Y RSALD+LELQPDLSALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 423 IHDSLVRMDDDYLRSALDFLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGR 244
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTP 265
P+FMGPGGIAYEGL+F++PS+ DGS+SVAISLQAEHM+ F K IYD * P
Sbjct: 243 PIFMGPGGIAYEGLSFIIPSSTNDGSMSVAISLQAEHMKLFEKFIYDI*QNEP 85
Score = 82.6 bits (174), Expect(2) = 2e-021
Identities = 37/57 (64%), Positives = 42/57 (73%)
Frame = +2 / +2
Query: 422 GRPHPKSASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSN 592
G P PKSASW+G TQLV PR GHR V APRT AD+SG SSR S AD + SS+R+N
Sbjct: 242 GLPQPKSASWIGSLTQLVIPRFGHRKVWAPRTRADKSG*SSRKSRADLR*SSSMRTN 412
Score = 40.9 bits (83), Expect(2) = 2e-021
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALG 370
++F N MCSAC +MATD LPS + LG
Sbjct: 110 INFSNSFMCSACKDMATDMLPSFVELG 190
>gb|DT521811.1|DT521811 WS02035.B21_E16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02035_E16 3', mRNA sequence
Length = 908
Score = 223 bits (481), Expect = 2e-057
Identities = 93/130 (71%), Positives = 103/130 (79%)
Frame = -1 / -1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMD+ Y +SALDYLELQPDLSALVRGAH+FRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 872 IHDALVRMDNDYLKSALDYLELQPDLSALVRGAHSFRCPNLGITSWVRLPIHDADFGWGR 693
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTPPHKSSVP 244
P+FMGPGGIAYEGL+F+LPS DGS+SVAISLQA+HM+ F K IYD * P SS
Sbjct: 692 PIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQAQHMKLFEKFIYDI*LNEPRLSSSRG 513
Query: 243 VRATQRSKRP 214
R RP
Sbjct: 512 FRPPFSKTRP 483
>gb|CV250147.1|CV250147 WS01126.B21_I18 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_I18 3', mRNA sequence
Length = 724
Score = 221 bits (476), Expect = 1e-056
Identities = 87/107 (81%), Positives = 97/107 (90%)
Frame = -1 / -1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I +L RMD+ Y RSALD+LELQPDLSALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 628 IHDSLVRMDNDYLRSALDFLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGR 449
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYD 283
P+FMGPGGIAYEGL+F++PS+ DGSLSVAISLQAEHM+ F K IYD
Sbjct: 448 PIFMGPGGIAYEGLSFIIPSSTNDGSLSVAISLQAEHMKLFEKFIYD 308
Score = 79.9 bits (168), Expect(2) = 4e-021
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = +2 / +3
Query: 422 GRPHPKSASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSN 592
G P PKSASW+G TQLV PR GHR V APRT AD+SG SSR S AD + S+R+N
Sbjct: 447 GLPQPKSASWIGSLTQLVIPRFGHRKVWAPRTRADKSG*SSRKSRADLR*SLSMRTN 617
Score = 42.3 bits (86), Expect(2) = 4e-021
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2 / +3
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALG 370
++F N MCSAC +MATD+LPS + LG
Sbjct: 315 INFSNSFMCSACKDMATDKLPSFVELG 395
>gb|BU894854.1|BU894854 X016A06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 608
Score = 220 bits (475), Expect = 2e-056
Identities = 86/110 (78%), Positives = 99/110 (90%)
Frame = -1 / +2
Query: 594 ALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVF 415
+L RMD+ Y RSALD+LELQPDL+ALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGRP+F
Sbjct: 26 SLVRMDNDYLRSALDFLELQPDLTALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPLF 205
Query: 414 MGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTP 265
MGPGGIAYEGL+F++PS+ DGS+SVAISLQAEHM+ F+K IYD * P
Sbjct: 206 MGPGGIAYEGLSFIIPSSTNDGSMSVAISLQAEHMKLFKKFIYDI*QKQP 355
>gb|BU870237.1|BU870237 Q010B24 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 603
Score = 108 bits (230), Expect(3) = 3e-056
Identities = 47/81 (58%), Positives = 57/81 (70%)
Frame = -3 / +1
Query: 910 TAVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCA 731
TAV+I KL+R +L L+++ +S+Y +LA HVWR A ARGLP DQ TKLY A
Sbjct: 217 TAVSILKLTRDQLNTLKAKAKEGGNNIGYSSYEMLAGHVWRSACKARGLPDDQETKLYIA 396
Query: 730 TDGRQRLQPPLPEGYFGNVIF 668
TDGR RL+P LP GYFGNVIF
Sbjct: 397 TDGRSRLRPTLPPGYFGNVIF 459
Score = 107 bits (229), Expect(3) = 3e-056
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / +1
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
QHH A GFSGLHF+N+W+D+ RG+ + PFIDR+LLRARDPP P + H+EYQP PAM
Sbjct: 10 QHHAADGFSGLHFVNTWSDMARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPPPAM 183
Score = 42.8 bits (87), Expect(3) = 3e-056
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDL 526
I +L RMD+ Y RSALD+LELQPDL
Sbjct: 526 IHDSLVRMDNDYLRSALDFLELQPDL 603
>gb|BU791132.1|BU791132 pni127 Poplar limiting vs. luxuriant nitrogen Populus trichocarpa x
Populus deltoides cDNA 3' similar to anthranilate
N-hydroxycinnamoyl/benzoyltransferase, mRNA sequence
Length = 636
Score = 159 bits (342), Expect(2) = 1e-055
Identities = 60/109 (55%), Positives = 80/109 (73%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I+ AL RMD+ Y RSA+DYL +QP+L AL RG HTF PN+ + SW+ +PI+DADFGWGR
Sbjct: 208 IRGALKRMDNEYLRSAIDYLHVQPNLEALKRGPHTFNNPNINIVSWMTMPIYDADFGWGR 387
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF* 277
P FMGP + +EG+A++ S + DGS + I L++ HME F+K YDF*
Sbjct: 388 PSFMGPAVVLFEGMAYITRSPSNDGSFMIFICLESNHMELFKKFFYDF* 534
Score = 78.5 bits (165), Expect(2) = 1e-055
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -3 / +1
Query: 808 LAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
LAAH+W+C ARG+ DQ TKL+ TDGR RL PPLP GY GN +F
Sbjct: 1 LAAHIWQCTCKARGISNDQATKLHIPTDGRSRLNPPLPAGYCGNALF 141
>gb|BI138216.1|BI138216 F101P32Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 412
Score = 215 bits (463), Expect = 7e-055
Identities = 85/105 (80%), Positives = 95/105 (90%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I +L RMD+ Y RSALD+LELQPDLSALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGR
Sbjct: 7 IHDSLVRMDNDYLRSALDFLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGR 186
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLI 289
P+FMGPGGIAYEGL+F++PS+ DGSLSVAISLQAEHM+ F K I
Sbjct: 187 PIFMGPGGIAYEGLSFIIPSSTNDGSLSVAISLQAEHMKLFEKFI 321
Score = 79.9 bits (168), Expect(2) = 4e-021
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = +2 / -3
Query: 422 GRPHPKSASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSN 592
G P PKSASW+G TQLV PR GHR V APRT AD+SG SSR S AD + S+R+N
Sbjct: 188 GLPQPKSASWIGSLTQLVIPRFGHRKVWAPRTRADKSG*SSRKSRADLR*SLSMRTN 18
Score = 42.3 bits (86), Expect(2) = 4e-021
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2 / -3
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALG 370
++F N MCSAC +MATD+LPS + LG
Sbjct: 320 INFSNSFMCSACKDMATDKLPSFVELG 240
>gb|BP936352.1|BP936352 BP936352 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-090_C08.r 3', mRNA sequence
Length = 493
Score = 204 bits (440), Expect(2) = 1e-052
Identities = 79/97 (81%), Positives = 88/97 (90%)
Frame = -1 / -1
Query: 555 LDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAF 376
LD+LELQPDLSALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGRP+FMGPGGIAYEGL+F
Sbjct: 382 LDFLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSF 203
Query: 375 VLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTP 265
++PS+ DGS+SVAISLQAEHM+ F K IYD * P
Sbjct: 202 IIPSSTNDGSMSVAISLQAEHMKLFEKFIYDI*QNEP 92
Score = 23.5 bits (45), Expect(2) = 1e-052
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1 / -3
Query: 603 IQAALDRMDDGYCRSALDY 547
I +L RMD+ Y RSAL +
Sbjct: 431 IHDSLVRMDNDYLRSALGF 375
>gb|CV240628.1|CV240628 WS0251.B21_O13 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0251_O13 3', mRNA sequence
Length = 579
Score = 206 bits (445), Expect = 2e-052
Identities = 80/93 (86%), Positives = 88/93 (94%)
Frame = -1 / -1
Query: 561 SALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGL 382
SALD+LELQPDLSALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGRP+FMGPGGIAYEGL
Sbjct: 576 SALDFLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGL 397
Query: 381 AFVLPSANRDGSLSVAISLQAEHMEKFRKLIYD 283
+F++PS+ DGSLSVAISLQAEHM+ F K IYD
Sbjct: 396 SFIIPSSTNDGSLSVAISLQAEHMKLFEKFIYD 298
>gb|CF228426.1|CF228426 PtaXM0012H11H1115 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 536
Score = 206 bits (444), Expect = 3e-052
Identities = 80/99 (80%), Positives = 90/99 (90%)
Frame = -1 / +3
Query: 561 SALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGL 382
SALD+LELQPDL+ALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGRP+FMGPGGIAYEGL
Sbjct: 6 SALDFLELQPDLTALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPLFMGPGGIAYEGL 185
Query: 381 AFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTP 265
+F++PS+ DGS+SVAISLQAEHM+ F K IYD * P
Sbjct: 186 SFIIPSSTNDGSMSVAISLQAEHMKLFEKFIYDI*QKQP 302
>gb|CA932240.1|CA932240 MTU5CS.P10.D12 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 538
Score = 100 bits (212), Expect(3) = 6e-050
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I A+ RMDD Y RSA+DYLE DL+ ++R T+R PNL + SWV LP +DADFGWG+
Sbjct: 223 IHKAIKRMDDEYLRSAVDYLEKVDDLTTVMRSPETYRSPNLTIVSWVYLPFYDADFGWGK 402
Query: 423 PVFMGP 406
PV+M P
Sbjct: 403 PVYMRP 420
Score = 94.1 bits (199), Expect(3) = 6e-050
Identities = 35/52 (67%), Positives = 41/52 (78%)
Frame = -3 / +1
Query: 823 STYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
STY +L AH+WRCA ARGL +DQ TKL +TDGR R +PP+P GYFGNVIF
Sbjct: 1 STYVILTAHIWRCACKARGLSSDQATKLNISTDGRNRFRPPVPPGYFGNVIF 156
Score = 43.2 bits (88), Expect(3) = 6e-050
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / +1
Query: 396 AYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIY 286
A+EG ++LP DG+LS I L+ +H+ F KL Y
Sbjct: 427 AFEGKGYILPGPANDGTLSPTICLETDHL*SFHKLFY 537
>gb|CV229337.1|CV229337 WS01912.B21_P14 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01912_P14 3', mRNA sequence
Length = 507
Score = 192 bits (414), Expect = 4e-048
Identities = 78/111 (70%), Positives = 89/111 (80%)
Frame = -1 / -1
Query: 546 LELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLP 367
+ELQPDLSALVRGAH+F+CPNLG+TSWVRLPIHDADFGWGRP+FMGPGGIAYEGL+F+LP
Sbjct: 507 VELQPDLSALVRGAHSFQCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILP 328
Query: 366 SANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTPPHKSSVPVRATQRSKRP 214
S DGS+SVAISLQA+HM+ F + IYD * P SS R RP
Sbjct: 327 SPTNDGSMSVAISLQAQHMKLFEEFIYDI*LNEPRLSSSRGFRPPFSKTRP 175
>gb|BU894150.1|BU894150 X003E10 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 289
Score = 188 bits (405), Expect = 7e-047
Identities = 72/90 (80%), Positives = 81/90 (90%)
Frame = -1 / +3
Query: 534 PDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANR 355
PDL+ALVRGAHTFRCPNLG+TSWVRLPIHDADFGWGRP+FMGPGGIAYEGL+F++PS+
Sbjct: 3 PDLTALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPLFMGPGGIAYEGLSFIIPSSTN 182
Query: 354 DGSLSVAISLQAEHMEKFRKLIYDF*SPTP 265
DGS+SVAISLQAEHM+ F K IYD * P
Sbjct: 183 DGSMSVAISLQAEHMKLFEKFIYDI*QKQP 272
>gb|BU897564.1|BU897564 X059F08 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 521
Score = 111 bits (236), Expect(3) = 2e-043
Identities = 48/81 (59%), Positives = 58/81 (71%)
Frame = -3 / +3
Query: 910 TAVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCA 731
TAV+IFKL+R +L L+++ +S+Y +LA HVWR A ARGLP DQ TKLY A
Sbjct: 135 TAVSIFKLTRDQLNTLKAKAKEGGNNIGYSSYEMLAGHVWRSACKARGLPDDQETKLYIA 314
Query: 730 TDGRQRLQPPLPEGYFGNVIF 668
TDGR RL+P LP GYFGNVIF
Sbjct: 315 TDGRSRLRPTLPPGYFGNVIF 377
Score = 61.6 bits (128), Expect(3) = 2e-043
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = -3 / +3
Query: 1048 PFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
PFIDR+LLRARDPP P + H+EYQP PAM
Sbjct: 15 PFIDRTLLRARDPPQPAFHHVEYQPPPAM 101
Score = 42.8 bits (87), Expect(3) = 2e-043
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -1 / +3
Query: 603 IQAALDRMDDGYCRSALDYLELQPDL 526
I +L RMD+ Y RSALD+LELQPDL
Sbjct: 444 IHDSLVRMDNDYLRSALDFLELQPDL 521
>gb|CF233880.1|CF233880 PtaJXO0028F5F0511 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 614
Score = 109 bits (233), Expect(3) = 7e-042
Identities = 47/81 (58%), Positives = 57/81 (70%)
Frame = -3 / +3
Query: 910 TAVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCA 731
TAV+IFKL+R + L+++ +S+Y +LA HVWR A ARGLP DQ TKLY A
Sbjct: 165 TAVSIFKLTRDQXXTLKAKAKEGGNNIGYSSYEMLAGHVWRSACKARGLPDDQETKLYIA 344
Query: 730 TDGRQRLQPPLPEGYFGNVIF 668
TDGR RL+P LP GYFGNVIF
Sbjct: 345 TDGRSRLRPTLPPGYFGNVIF 407
Score = 66.1 bits (138), Expect(3) = 7e-042
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = -3 / +3
Query: 1081 DLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
++ RG+ + PFIDR+LLRARDPP P + H+EYQP PAM
Sbjct: 12 NMARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPPPAM 131
Score = 34.5 bits (69), Expect(3) = 7e-042
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1 / +1
Query: 579 DDGYCRSALDYLELQPD 529
D+ Y RSALD+LELQPD
Sbjct: 499 DNDYLRSALDFLELQPD 549
>gb|DT488651.1|DT488651 WS02537.B21_A15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02537_A15 3', mRNA sequence
Length = 895
Score = 102 bits (218), Expect(2) = 5e-041
Identities = 38/66 (57%), Positives = 50/66 (75%)
Frame = -1 / -1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I A+ RMDD Y RSA+DYLE DL+ ++R + T+R PNL + +WVRLP +DADFGWG+
Sbjct: 667 IHKAIKRMDDEYLRSAVDYLEKVDDLTTVMRSSETYRSPNLHIVNWVRLPFYDADFGWGK 488
Query: 423 PVFMGP 406
PV+M P
Sbjct: 487 PVYMRP 470
Score = 86.3 bits (182), Expect(2) = 5e-041
Identities = 33/53 (62%), Positives = 38/53 (71%)
Frame = -3 / -1
Query: 826 FSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
+STY +L AH+WRCA ARGL DQ TKL T+GR R +PPL GYFGNV F
Sbjct: 892 YSTYVILTAHIWRCACKARGLSNDQATKLSIPTNGRDRFRPPLQPGYFGNVTF 734
>gb|CV252228.1|CV252228 PX0011.B21_A01 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0011_A01 3', mRNA sequence
Length = 565
Score = 158 bits (339), Expect = 9e-038
Identities = 64/93 (68%), Positives = 71/93 (76%)
Frame = -1 / -3
Query: 492 CPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEH 313
CPNLG+TSWVRLPIHDADFGWGRP+FMGPGGIAYEGL+F+LPS DGS+SVAISLQA+H
Sbjct: 563 CPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQAQH 384
Query: 312 MEKFRKLIYDF*SPTPPHKSSVPVRATQRSKRP 214
M+ F K IYD * P SS R RP
Sbjct: 383 MKLFEKFIYDI*LNEPRLSSSRGFRPPFSKTRP 285
>gb|CF233931.1|CF233931 PtaJXO0029D10D1008 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 469
Score = 111 bits (237), Expect(2) = 2e-036
Identities = 48/81 (59%), Positives = 58/81 (71%)
Frame = -3 / +1
Query: 910 TAVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCA 731
TAV+IFKL+R +L L+++ +S+Y +LA HVWR A ARGLP DQ TKLY A
Sbjct: 154 TAVSIFKLTRDQLNTLKAKAKEGGNIIGYSSYEMLAGHVWRSACKARGLPDDQETKLYIA 333
Query: 730 TDGRQRLQPPLPEGYFGNVIF 668
TDGR RL+P LP GYFGNVIF
Sbjct: 334 TDGRSRLRPTLPPGYFGNVIF 396
Score = 62.5 bits (130), Expect(2) = 2e-036
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = -3 / +1
Query: 1072 RGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
RG+ + PF DR+LLRARDPP P + H+EYQP PAM
Sbjct: 10 RGLDLTIPPFXDRTLLRARDPPQPAFHHVEYQPPPAM 120
>gb|CX187407.1|CX187407 F11_45-40_11.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 510
Score = 148 bits (317), Expect = 1e-034
Identities = 56/70 (80%), Positives = 64/70 (91%)
Frame = -1 / +3
Query: 486 NLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHME 307
NLG+TSWVRLPIHDADFGWGRP+FMGPGGIAYEGL+F++PS+ DGS+SVAISLQAEHM+
Sbjct: 12 NLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSMSVAISLQAEHMK 191
Query: 306 KFRKLIYDF* 277
F K IYD *
Sbjct: 192 LFEKFIYDI* 221
>gb|BU814291.1|BU814291 N027E03 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 411
Score = 145 bits (312), Expect = 5e-034
Identities = 60/89 (67%), Positives = 67/89 (75%)
Frame = -1 / +3
Query: 480 GLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKF 301
G+TSWVRLPIHDADFGWGRP+FMGPGGIAYEGL+F+LPS DGS+SVAISLQA+HM+ F
Sbjct: 12 GITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQAQHMKLF 191
Query: 300 RKLIYDF*SPTPPHKSSVPVRATQRSKRP 214
K IYD * P SS R RP
Sbjct: 192 EKFIYDI*LNEPRLSSSRGSRPPFSKTRP 278
>gb|DT477172.1|DT477172 WS02519.BR_D02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02519_D02 5', mRNA sequence
Length = 804
Score = 105 bits (223), Expect(2) = 8e-033
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = -3 / +1
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
QHH A GFSGLHF+N+W+D+ RG+ + PFIDR+LLRARDPP P + H+EYQP P+M
Sbjct: 595 QHHAADGFSGLHFVNTWSDMARGLDLTIPPFIDRTLLRARDPPQPVFHHVEYQPPPSM 768
Score = 56.5 bits (117), Expect(2) = 8e-033
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = -2 / +1
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P +L++LIPTVD++ IS++PLLVLQVT+FK G G GM
Sbjct: 469 PTLELKQLIPTVDYSGGISTYPLLVLQVTYFKCGGVSLGVGM 594
>gb|CV274818.1|CV274818 WS0174.B21.1_H17 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0174_H17 3', mRNA sequence
Length = 751
Score = 81.3 bits (171), Expect(4) = 2e-032
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = -3 / +3
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
QHH + GFSGL F N+W+D+ R + + P IDR+LLRA PP P + H+EY P PAM
Sbjct: 303 QHHASDGFSGLLFGNTWSDMDRVLDLTIPPLIDRTLLRAGHPPQPAFRHVEYHPPPAM 476
Score = 72.5 bits (152), Expect(4) = 2e-032
Identities = 32/52 (61%), Positives = 37/52 (71%)
Frame = -3 / +3
Query: 826 FSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVI 671
+S+Y VLA+HVW ARGLP DQ +KLY AT GR RL+P LP YFG VI
Sbjct: 594 YSSYDVLASHVWIS*CKARGLPDDQESKLYIATYGRARLRPTLPPVYFGYVI 749
Score = 25.8 bits (50), Expect(4) = 2e-032
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -2 / +3
Query: 1211 ISSFPLLVLQVTHF 1170
IS++PLL LQVT+F
Sbjct: 228 ISTYPLLGLQVTYF 269
Score = 22.6 bits (43), Expect(4) = 2e-032
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2 / +2
Query: 1262 PPGDLERLIPTVDFT 1218
P +L+ LIPTVD++
Sbjct: 176 PTLELKHLIPTVDYS 220
>gb|CV130738.1|CV130738 B9SP09h11 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 825
Score = 68.4 bits (143), Expect(4) = 3e-032
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = -3 / +2
Query: 1132 HHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEY 980
H + G + F+NSW + RG+P+ PFIDRS+L+AR+PP YPH E+
Sbjct: 68 HCMFDGIGAMEFVNSWGETARGLPLCVPPFIDRSILKARNPPKIEYPHQEF 220
Score = 62.9 bits (131), Expect(4) = 3e-032
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = -3 / +2
Query: 823 STYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVI 671
+T+ L+A VWR + A + DQ TKL A DGR + +PPLP+GYFGN I
Sbjct: 356 TTFEGLSAFVWRARTKALKMLPDQQTKLLFAVDGRPKFKPPLPKGYFGNGI 508
Score = 42.8 bits (87), Expect(4) = 3e-032
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1 / +2
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSV 337
+T+W RL + DFGWG PV GP + + + L S++V
Sbjct: 680 ITTWSRLSFYTTDFGWGEPVLSGPVALPEKEVILFLSHGKERKSINV 820
Score = 28.1 bits (55), Expect(4) = 3e-032
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / +2
Query: 603 IQAALDRMDDGYCRSALDYLE 541
+Q A+ + D Y RSA+DY E
Sbjct: 578 VQDAIKMVTDSYMRSAMDYFE 640
>gb|CV276909.1|CV276909 WS0142.B21_C04 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_C04 3', mRNA sequence
Length = 470
Score = 139 bits (299), Expect = 3e-032
Identities = 54/90 (60%), Positives = 67/90 (74%)
Frame = -1 / -3
Query: 543 ELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPS 364
E QPDL+AL RG HT+ PNL + SW+RLP+HDADFGWGRPVFMGP + EG A++L S
Sbjct: 468 EAQPDLNALKRGPHTYASPNLNIVSWIRLPVHDADFGWGRPVFMGPARVFCEGNAYILRS 289
Query: 363 ANRDGSLSVAISLQAEHMEKFRKLIYDF*S 274
DGSLS+ I L+ +HM F K +YDF*+
Sbjct: 288 PVNDGSLSLFICLEEQHMPLFEKCLYDF*A 199
>gb|BI129975.1|BI129975 G098P36Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 425
Score = 139 bits (298), Expect = 4e-032
Identities = 58/87 (66%), Positives = 64/87 (73%)
Frame = -1 / +3
Query: 474 TSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRK 295
TSWVR PIHDADFGWGRP+FMGPGGIAYEGL+F+LPS DGS+SVAISLQA+HM+ F K
Sbjct: 3 TSWVRRPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQAQHMKLFEK 182
Query: 294 LIYDF*SPTPPHKSSVPVRATQRSKRP 214
IYD * P SS R RP
Sbjct: 183 FIYDI*LNEPRLSSSRGSRPPFSKTRP 263
>gb|CA929350.1|CA929350 MTU2CA.P12.E02 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 599
Score = 95.9 bits (203), Expect(2) = 1e-028
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = -3 / +2
Query: 1132 HHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAMLSE 953
H +A G S LHFINSW+D+ RG+P++ PFIDR+LLRARDPP P + H+EY P+ M +
Sbjct: 362 HILADGTSALHFINSWSDVARGLPVSTPPFIDRTLLRARDPPNPTFHHVEYDPSSTMDTP 541
Query: 952 PPQAALTS 929
P T+
Sbjct: 542 PQSQPKTT 565
Score = 51.9 bits (107), Expect(2) = 1e-028
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -2 / +2
Query: 1241 LIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
L+P VD++ ISSFPL+VLQVTHFK G G G+
Sbjct: 254 LVPEVDYSGGISSFPLVVLQVTHFKCGAVSLGVGL 358
>gb|BU868690.1|BU868690 M120A01 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 594
Score = 90.0 bits (190), Expect(2) = 3e-028
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = -3 / +2
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHI 986
QHH A GFSGLHF+N+W+D+ RG+ + PFIDR+LLRARDPP P + H+
Sbjct: 443 QHHAADGFSGLHFVNTWSDMARGLDLTIPPFIDRTLLRARDPPQPAFHHV 592
Score = 56.5 bits (117), Expect(2) = 3e-028
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = -2 / +2
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P +L++LIPTVD++ IS++PLLVLQVT+FK G G GM
Sbjct: 317 PTLELKQLIPTVDYSGGISTYPLLVLQVTYFKCGGVSLGVGM 442
>gb|CA924248.1|CA924248 MTU7CL.P3.E04 Aspen leaf cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 408
Score = 90.0 bits (190), Expect(2) = 3e-028
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = -3 / -2
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHI 986
QHH A GFSGLHF+N+W+D+ RG+ + PFIDR+LLRARDPP P + H+
Sbjct: 152 QHHAADGFSGLHFVNTWSDMARGLDLTIPPFIDRTLLRARDPPQPAFHHV 3
Score = 56.5 bits (117), Expect(2) = 3e-028
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = -2 / -2
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P +L++LIPTVD++ IS++PLLVLQVT+FK G G GM
Sbjct: 278 PTLELKQLIPTVDYSGGISTYPLLVLQVTYFKCGGVSLGVGM 153
>gb|CA924273.1|CA924273 MTU7CL.P3.G09 Aspen leaf cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 408
Score = 90.0 bits (190), Expect(2) = 3e-028
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = -3 / -2
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHI 986
QHH A GFSGLHF+N+W+D+ RG+ + PFIDR+LLRARDPP P + H+
Sbjct: 152 QHHAADGFSGLHFVNTWSDMARGLDLTIPPFIDRTLLRARDPPQPAFHHV 3
Score = 56.5 bits (117), Expect(2) = 3e-028
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = -2 / -2
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P +L++LIPTVD++ IS++PLLVLQVT+FK G G GM
Sbjct: 278 PTLELKQLIPTVDYSGGISTYPLLVLQVTYFKCGGVSLGVGM 153
>gb|CV228649.1|CV228649 WS01910.B21_M23 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01910_M23 3', mRNA sequence
Length = 477
Score = 125 bits (268), Expect = 6e-028
Identities = 52/81 (64%), Positives = 59/81 (72%)
Frame = -1 / -3
Query: 456 PIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF* 277
PIHDADFGWGRP+FMGPGGIAYEGL+F+LPS DGS+SVAISLQA+HM+ F + IYD *
Sbjct: 475 PIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQAQHMKLFEEFIYDI* 296
Query: 276 SPTPPHKSSVPVRATQRSKRP 214
P SS R RP
Sbjct: 295 LNEPRLSSSRGFRPPFSKTRP 233
>gb|CK113704.1|CK113704 UR110TH03 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone UR110TH03 5', mRNA sequence
Length = 611
Score = 65.7 bits (137), Expect(3) = 2e-026
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = -3 / +2
Query: 823 STYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVI 671
+T+ VL+A VWR A + DQ KL A DGR R +PP+P+GYFGN I
Sbjct: 83 TTFQVLSAFVWRARCQALRMVPDQQIKLLFAADGRSRFEPPIPKGYFGNAI 235
Score = 60.6 bits (126), Expect(3) = 2e-026
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = -1 / +2
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
+T+W RL +H DFGWG PV GP + + + L N S++V I L A ME F
Sbjct: 407 ITTWSRLSLHTTDFGWGVPVLSGPVALPEKEVILFLSHGNERKSINVLIGLPASSMEIFE 586
Query: 297 KLI 289
+L+
Sbjct: 587 ELM 595
Score = 31.8 bits (63), Expect(3) = 2e-026
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1 / +2
Query: 603 IQAALDRMDDGYCRSALDYLEL 538
+Q A+ +DD Y RSA+DY E+
Sbjct: 305 VQEAVKMVDDSYMRSAIDYFEV 370
>gb|BU874212.1|BU874212 Q065E06 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 710
Score = 106 bits (226), Expect(3) = 8e-026
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = -3 / +1
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
QHH A GFSGLHF+N+W+D+ RG+ + PFIDR+LLRARDPP P + H+EYQP P+M
Sbjct: 409 QHHAADGFSGLHFVNTWSDMARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPPPSM 582
Score = 26.3 bits (51), Expect(3) = 8e-026
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -3 / +1
Query: 910 TAVAIFKLSRAELVRLRSQ 854
TAV+IFKLSR +L L+++
Sbjct: 616 TAVSIFKLSRDQLSTLKAK 672
Score = 23.1 bits (44), Expect(3) = 8e-026
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2 / +1
Query: 1187 LQVTHFKWGFFFFGEGM 1137
LQVT+FK G G GM
Sbjct: 358 LQVTYFKCGGVSLGVGM 408
>gb|BU815877.1|BU815877 N047G11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 358
Score = 118 bits (252), Expect = 9e-026
Identities = 50/78 (64%), Positives = 56/78 (71%)
Frame = -1 / +2
Query: 447 DADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPT 268
DADFGWGRP+FMGPGGIAYEGL+F+LPS DGS+SVAISLQA+HM+ F K IYD *
Sbjct: 2 DADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQAQHMKLFEKFIYDI*LNE 181
Query: 267 PPHKSSVPVRATQRSKRP 214
P SS R RP
Sbjct: 182 PRLSSSRGSRPPFSKTRP 235
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 542,059,197
Number of Sequences: 369679
Number of extensions: 6625683
Number of successful extensions: 47238
Number of sequences better than 1.0e-020: 62
length of database: 67,802,888
effective HSP length: 54
effective length of database: 47,840,222
effective search space used: 19614491020
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)