TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2455862.2.1
(712 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV232256.1|CV232256 WS0197.B21_A13 PT-DX-N-A-10 Populus ... 71 2e-027
gb|BP930654.1|BP930654 BP930654 full-length enriched poplar... 71 2e-027
gb|CV233936.1|CV233936 WS01212.B21_P06 PT-GT-FL-A-3 Populus... 71 3e-027
gb|CV227585.1|CV227585 WS0167.B21_J19 PT-DX-A-7 Populus tri... 71 3e-027
gb|DT526652.1|DT526652 WS02048.C21_J19 PTxN-IB-N-A-11 Popul... 71 2e-026
gb|DN488500.1|DN488500 S002F05.3pR Populus imbibed seed cDN... 70 5e-026
gb|BU861485.1|BU861485 S002F05 Populus imbibed seed cDNA li... 70 5e-026
gb|BU811013.1|BU811013 UL78TH08 Populus leaf cDNA library P... 71 9e-026
gb|CK095633.1|CK095633 UA17CPF12.3pR Populus dormant cambiu... 71 2e-025
gb|BU884753.1|BU884753 R015A10 Populus root cDNA library Po... 71 2e-025
gb|BU811275.1|BU811275 UL82TB12 Populus leaf cDNA library P... 71 2e-025
gb|BU864053.1|BU864053 S035G12 Populus imbibed seed cDNA li... 70 2e-025
gb|BU816958.1|BU816958 UA11BPC02 Populus tremula cambium cD... 70 2e-025
gb|CK095492.1|CK095492 UA11BPC02.3pR Populus dormant cambiu... 70 2e-025
gb|DN500495.1|DN500495 UL57PD01.5pR Populus cold stressed l... 69 3e-025
gb|DT477894.1|DT477894 WS02521.BR_E14 PT-MB-N-A-15 Populus ... 71 3e-025
gb|DT482969.1|DT482969 WS02521.B21_E14 PT-MB-N-A-15 Populus... 71 3e-025
gb|DT514611.1|DT514611 WS02425.B21_E18 PTxD-ICC-N-A-14 Popu... 69 8e-025
gb|CV257020.1|CV257020 WS0245.B21_G24 PTxD-ICC-N-A-14 Popul... 69 8e-025
gb|CV258272.1|CV258272 WS0249.B21_A23 PTxD-ICC-N-A-14 Popul... 69 8e-025
gb|DT520229.1|DT520229 WS02446.B21.1_P09 PTxD-ICC-N-A-14 Po... 69 8e-025
gb|CV255121.1|CV255121 WS02412.B21_C01 PTxD-ICC-N-A-14 Popu... 69 8e-025
gb|CV236471.1|CV236471 WS01224.B21.1_D19 PT-GT-FL-A-3 Popul... 69 1e-024
gb|CV265667.1|CV265667 WS02027.B21_O12 PTxN-IB-N-A-11 Popul... 68 1e-024
gb|BU809398.1|BU809398 UL57PD01 Populus leaf cDNA library P... 66 3e-024
gb|CV261338.1|CV261338 WS02016.B21_I04 PTxN-IB-N-A-11 Popul... 65 1e-023
gb|CK105400.1|CK105400 UA11BPC02.5pR Populus dormant cambiu... 65 1e-023
gb|BP935850.1|BP935850 BP935850 full-length enriched poplar... 68 2e-023
gb|DT522694.1|DT522694 WS02037.B21_L04 PTxN-IB-N-A-11 Popul... 66 3e-023
gb|CV253328.1|CV253328 WS0221.B21_J11 PTxD-ICC-A-12 Populus... 68 2e-022
gb|DN488621.1|DN488621 S016C11.3pR Populus imbibed seed cDN... 64 2e-022
gb|CV230048.1|CV230048 WS01915.B21_E06 PT-DX-N-A-10 Populus... 68 6e-022
gb|CF236335.1|CF236335 PtaJXT11E9E0909 Poplar cDNA library ... 68 8e-022
gb|CV256088.1|CV256088 WS0242.B21_O11 PTxD-ICC-N-A-14 Popul... 68 1e-021
gb|CV270106.1|CV270106 WS0151.B21_B16 PTxN-IB-A-6 Populus t... 68 1e-021
gb|CV237332.1|CV237332 WS01227.B21.1_I01 PT-GT-FL-A-3 Popul... 68 1e-021
gb|CV236170.1|CV236170 WS01223.B21_B16 PT-GT-FL-A-3 Populus... 68 1e-021
gb|DT518701.1|DT518701 WS02438.B21_P13 PTxD-ICC-N-A-14 Popu... 68 1e-021
gb|CN519614.1|CN519614 GQ0104.B3_J05 GQ010 Populus trichoca... 68 1e-021
gb|CV248079.1|CV248079 WS0112.B21_F17 PT-P-FL-A-2 Populus t... 68 1e-021
gb|CV253198.1|CV253198 WS0221.B21_C22 PTxD-ICC-A-12 Populus... 68 1e-021
gb|CV253554.1|CV253554 WS0222.B21_E22 PTxD-ICC-A-12 Populus... 68 1e-021
gb|BU862546.1|BU862546 S017A09 Populus imbibed seed cDNA li... 67 1e-021
gb|DT509897.1|DT509897 WS02425.BR_A16 PTxD-ICC-N-A-14 Popul... 68 9e-021
gb|DT514517.1|DT514517 WS02425.B21_A16 PTxD-ICC-N-A-14 Popu... 68 9e-021
gb|CV257704.1|CV257704 WS0247.B21_G18 PTxD-ICC-N-A-14 Popul... 68 9e-021
>gb|CV232256.1|CV232256 WS0197.B21_A13 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0197_A13 3', mRNA sequence
Length = 734
Score = 71.2 bits (149), Expect(2) = 2e-027
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = +1 / -3
Query: 202 TDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIGLLVSPIR 375
++ W S +LDA + W R+NYM YNYC D RFPQG P ECS +* +L P++
Sbjct: 339 SNAWFSEELDATRQERLKWVRENYMVYNYCKDVNRFPQGLPTECSMS*KEDVLALPVQ 166
Score = 71.2 bits (149), Expect(2) = 2e-027
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +1 / -3
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++LW+ WAT+ G VK DW+ APF SYR ++A+ACV
Sbjct: 537 FPKNQPMRIYSSLWNADDWATRGGLVKTDWALAPFTASYRNFNAEACV 394
>gb|BP930654.1|BP930654 BP930654 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-012_P11.r 3', mRNA sequence
Length = 667
Score = 71.2 bits (149), Expect(2) = 2e-027
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = +1 / -1
Query: 202 TDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIGLLVSPIR 375
++ W S +LD+A + W R+NYM YNYC D RFPQG P ECS +* +L P++
Sbjct: 352 SNAWFSEELDSARHERLKWVRENYMVYNYCKDVNRFPQGLPPECSMS*KEDVLALPVQ 179
Score = 71.2 bits (149), Expect(2) = 2e-027
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +1 / -1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++LW+ WAT+ G VK DW+ APF SYR ++A+ACV
Sbjct: 550 FPKNQPMRIYSSLWNADDWATRGGLVKTDWALAPFTASYRNFNAEACV 407
>gb|CV233936.1|CV233936 WS01212.B21_P06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01212_P06 3', mRNA sequence
Length = 895
Score = 71.2 bits (149), Expect(2) = 3e-027
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +1 / -2
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++LW+ WAT+ G VK DW+ APF SYR ++A+ACV
Sbjct: 546 FPKNQPMRIYSSLWNADDWATRGGLVKTDWALAPFTASYRNFNAEACV 403
Score = 70.7 bits (148), Expect(2) = 3e-027
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = +1 / -2
Query: 202 TDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIGLLVSPIR 375
++ W S +LD+ + WAR+NYM YNYC D RFPQG P ECS +* +L P++
Sbjct: 348 SNAWFSEELDSTRQERLKWARENYMVYNYCKDINRFPQGLPPECSMS*KDDVLALPVQ 175
>gb|CV227585.1|CV227585 WS0167.B21_J19 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_J19
3', mRNA sequence
Length = 595
Score = 71.2 bits (149), Expect(2) = 3e-027
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +1 / -3
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++LW+ WAT+ G VK DW+ APF SYR ++A+ACV
Sbjct: 539 FPKNQPMRIYSSLWNADDWATRGGLVKTDWALAPFTASYRNFNAEACV 396
Score = 70.7 bits (148), Expect(2) = 3e-027
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = +1 / -3
Query: 202 TDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIGLLVSPIR 375
++ W S +LD+ + WAR+NYM YNYC D RFPQG P ECS +* +L P++
Sbjct: 341 SNAWFSEELDSTRQERLKWARENYMVYNYCKDINRFPQGLPPECSMS*KDDVLALPVQ 168
>gb|DT526652.1|DT526652 WS02048.C21_J19 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02048_J19 3', mRNA sequence
Length = 827
Score = 71.2 bits (149), Expect(2) = 2e-026
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +1 / -3
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++LW+ WAT+ G VK DW+ APF SYR ++A+ACV
Sbjct: 516 FPKNQPMRIYSSLWNADDWATRGGLVKTDWALAPFTASYRNFNAEACV 373
Score = 68.0 bits (142), Expect(2) = 2e-026
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +1 / -3
Query: 202 TDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIGLLVSPIR 375
++ W S +LD+ + W R+NYM YNYC D RFPQG P ECS +* +L P++
Sbjct: 318 SNAWFSEELDSTGQERLKWVRENYMVYNYCKDINRFPQGLPPECSMS*KDDVLALPVQ 145
>gb|DN488500.1|DN488500 S002F05.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S002F05 3', mRNA sequence
Length = 589
Score = 70.3 bits (147), Expect(2) = 5e-026
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +1 / -2
Query: 202 TDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIGLLVSPI 372
++ W S +LD+ + W R+NYM YNYC+D RFPQG P ECS +* +L P+
Sbjct: 324 SNAWFSEELDSTRQERLKWVRENYMVYNYCNDVNRFPQGLPTECSMS*EEDVLALPV 154
Score = 67.5 bits (141), Expect(2) = 5e-026
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +1 / -2
Query: 22 PGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
P +PM + ++LW+ WAT+ G VK DW+ APF SYR ++A+ACV
Sbjct: 519 PKNQPMRICSSLWNADDWATRGGLVKTDWALAPFTASYRNFNAEACV 379
>gb|BU861485.1|BU861485 S002F05 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 587
Score = 70.3 bits (147), Expect(2) = 5e-026
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +1 / +3
Query: 202 TDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIGLLVSPI 372
++ W S +LD+ + W R+NYM YNYC+D RFPQG P ECS +* +L P+
Sbjct: 267 SNAWFSEELDSTRQERLKWVRENYMVYNYCNDVNRFPQGLPTECSMS*EEDVLALPV 437
Score = 67.5 bits (141), Expect(2) = 5e-026
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +1 / +3
Query: 22 PGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
P +PM + ++LW+ WAT+ G VK DW+ APF SYR ++A+ACV
Sbjct: 72 PKNQPMRICSSLWNADDWATRGGLVKTDWALAPFTASYRNFNAEACV 212
>gb|BU811013.1|BU811013 UL78TH08 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 505
Score = 70.7 bits (148), Expect(2) = 9e-026
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +1 / +3
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+ YP +PM ++++LW+ WAT+ G +K DWS APF SYR ++A AC
Sbjct: 156 IPYPKSQPMWIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFNAQAC 302
Score = 66.1 bits (138), Expect(2) = 9e-026
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1 / +3
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
S + ++ W+S+ L + G + W ++NYM YNYC D RFPQG P ECS
Sbjct: 333 SSGSSSNSWLSQSLGSTGQGRIKWVQKNYMXYNYCTDTKRFPQGSPPECS 482
>gb|CK095633.1|CK095633 UA17CPF12.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA17CPF12 3', mRNA sequence
Length = 695
Score = 70.7 bits (148), Expect(2) = 2e-025
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +1 / -2
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+ YP +PM ++++LW+ WAT+ G +K DWS APF SYR ++A AC
Sbjct: 433 IPYPKSQPMWIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFNAQAC 287
Score = 65.2 bits (136), Expect(2) = 2e-025
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1 / -2
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
S + ++ W+S+ L + G + W ++NYM YNYC D RFPQG P ECS
Sbjct: 256 SSGSSSNSWLSQSLGSTGQGRIKWVQKNYMIYNYCTDTKRFPQGSPPECS 107
>gb|BU884753.1|BU884753 R015A10 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 587
Score = 70.7 bits (148), Expect(2) = 2e-025
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +1 / +1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+ YP +PM ++++LW+ WAT+ G +K DWS APF SYR ++A AC
Sbjct: 76 IPYPKSQPMWIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFNAQAC 222
Score = 65.2 bits (136), Expect(2) = 2e-025
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1 / +1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
S + ++ W+S+ L + G + W ++NYM YNYC D RFPQG P ECS
Sbjct: 253 SSGSSSNAWLSQSLGSTGQGRIKWVQKNYMIYNYCTDTKRFPQGSPPECS 402
>gb|BU811275.1|BU811275 UL82TB12 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 566
Score = 70.7 bits (148), Expect(2) = 2e-025
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +1 / +1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+ YP +PM ++++LW+ WAT+ G +K DWS APF SYR ++A AC
Sbjct: 64 IPYPKSQPMWIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFNAQAC 210
Score = 65.2 bits (136), Expect(2) = 2e-025
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1 / +1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
S + ++ W+S+ L + G + W ++NYM YNYC D RFPQG P ECS
Sbjct: 241 SSGSSSNSWLSQSLGSTGQGRIKWVQKNYMIYNYCTDTKRFPQGSPPECS 390
>gb|BU864053.1|BU864053 S035G12 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 479
Score = 70.3 bits (147), Expect(2) = 2e-025
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +1 / +2
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+ YP +PM ++++LW+ WAT+ G +K DWS APF SYR ++A AC
Sbjct: 23 IPYPKSQPMWIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFNAHAC 169
Score = 65.2 bits (136), Expect(2) = 2e-025
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1 / +2
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
S + ++ W+S+ L + G + W ++NYM YNYC D RFPQG P ECS
Sbjct: 200 SSGSSSNSWLSQSLGSTGQGRIKWVQKNYMIYNYCTDTKRFPQGSPPECS 349
>gb|BU816958.1|BU816958 UA11BPC02 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 458
Score = 70.3 bits (147), Expect(2) = 2e-025
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +1 / +3
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+ YP +PM ++++LW WAT+ G +K DWS APF SYR ++A AC
Sbjct: 30 IPYPKSQPMWIYSSLWSADDWATRGGLIKTDWSQAPFTASYRNFNAQAC 176
Score = 65.2 bits (136), Expect(2) = 2e-025
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1 / +3
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
S + ++ W+S+ L + G + W ++NYM YNYC D RFPQG P ECS
Sbjct: 207 SSGSSSNSWLSQSLGSTGQGRIKWVQKNYMIYNYCTDTKRFPQGSPPECS 356
>gb|CK095492.1|CK095492 UA11BPC02.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA11BPC02 3', mRNA sequence
Length = 438
Score = 70.3 bits (147), Expect(2) = 2e-025
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +1 / -2
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+ YP +PM ++++LW WAT+ G +K DWS APF SYR ++A AC
Sbjct: 410 IPYPKSQPMWIYSSLWSADDWATRGGLIKTDWSQAPFTASYRNFNAQAC 264
Score = 65.2 bits (136), Expect(2) = 2e-025
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1 / -2
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
S + ++ W+S+ L + G + W ++NYM YNYC D RFPQG P ECS
Sbjct: 233 SSGSSSNSWLSQSLGSTGQGRIKWVQKNYMIYNYCTDTKRFPQGSPPECS 84
>gb|DN500495.1|DN500495 UL57PD01.5pR Populus cold stressed leaves cDNA library Populus
tremula x Populus tremuloides cDNA clone UL57PD01 5',
mRNA sequence
Length = 579
Score = 69.3 bits (145), Expect(2) = 3e-025
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +1 / +2
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
YP + M ++A++W+ WAT+ G VK DW+ APF VSYR ++A AC+
Sbjct: 50 YPKRQSMRIYASIWNADDWATRGGLVKTDWTQAPFTVSYRNFNAQACI 193
Score = 65.7 bits (137), Expect(2) = 3e-025
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +1 / +2
Query: 205 DRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
+RW S++LD++ + W ++NYM YNYC D RFPQG P EC+
Sbjct: 233 NRWYSQELDSSSQKQLKWVQENYMVYNYCTDTKRFPQGLPHECN 364
>gb|DT477894.1|DT477894 WS02521.BR_E14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02521_E14 5', mRNA sequence
Length = 538
Score = 70.7 bits (148), Expect(2) = 3e-025
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +1 / +1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+ YP +PM ++++LW+ WAT+ G +K DWS APF SYR ++A AC
Sbjct: 13 IPYPKSQPMWIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFNAQAC 159
Score = 64.3 bits (134), Expect(2) = 3e-025
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1 / +1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
S + ++ W+S+ L + G + W ++NYM YNYC D RFPQG P ECS
Sbjct: 190 SSGSSSNSWLSQSLGSTGQGRIKWVQKNYMIYNYCTDTKRFPQGPPPECS 339
>gb|DT482969.1|DT482969 WS02521.B21_E14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02521_E14 3', mRNA sequence
Length = 538
Score = 70.7 bits (148), Expect(2) = 3e-025
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +1 / -1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+ YP +PM ++++LW+ WAT+ G +K DWS APF SYR ++A AC
Sbjct: 526 IPYPKSQPMWIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFNAQAC 380
Score = 64.3 bits (134), Expect(2) = 3e-025
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1 / -1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
S + ++ W+S+ L + G + W ++NYM YNYC D RFPQG P ECS
Sbjct: 349 SSGSSSNSWLSQSLGSTGQGRIKWVQKNYMIYNYCTDTKRFPQGPPPECS 200
>gb|DT514611.1|DT514611 WS02425.B21_E18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_E18 3', mRNA sequence
Length = 905
Score = 68.9 bits (144), Expect(2) = 8e-025
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +1 / -2
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++LW+ WAT+ G VK DW+ APF SYR + A ACV
Sbjct: 475 FPTKQPMRIYSSLWNADDWATRGGLVKTDWTQAPFTASYRNFKASACV 332
Score = 64.8 bits (135), Expect(2) = 8e-025
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +1 / -2
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FI 351
W + LDA+ + W +Q YM YNYC D RFPQG PAEC R+ F+
Sbjct: 274 WQVQALDASGRNRLRWVQQKYMIYNYCTDLKRFPQGIPAECKRSRFL 134
>gb|CV257020.1|CV257020 WS0245.B21_G24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0245_G24 3', mRNA sequence
Length = 800
Score = 68.9 bits (144), Expect(2) = 8e-025
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +1 / -3
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++LW+ WAT+ G VK DW+ APF SYR + A ACV
Sbjct: 453 FPTKQPMRIYSSLWNADDWATRGGLVKTDWTQAPFTASYRNFKASACV 310
Score = 64.8 bits (135), Expect(2) = 8e-025
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +1 / -3
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FI 351
W + LDA+ + W +Q YM YNYC D RFPQG PAEC R+ F+
Sbjct: 252 WQVQALDASGRNRLRWVQQKYMIYNYCTDLKRFPQGIPAECKRSRFL 112
>gb|CV258272.1|CV258272 WS0249.B21_A23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0249_A23 3', mRNA sequence
Length = 724
Score = 68.9 bits (144), Expect(2) = 8e-025
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +1 / -2
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++LW+ WAT+ G VK DW+ APF SYR + A ACV
Sbjct: 453 FPTKQPMRIYSSLWNADDWATRGGLVKTDWTQAPFTASYRNFKASACV 310
Score = 64.8 bits (135), Expect(2) = 8e-025
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +1 / -2
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FI 351
W + LDA+ + W +Q YM YNYC D RFPQG PAEC R+ F+
Sbjct: 252 WQVQALDASGRNRLRWVQQKYMIYNYCTDLKRFPQGIPAECKRSRFL 112
>gb|DT520229.1|DT520229 WS02446.B21.1_P09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02446_P09 3', mRNA sequence
Length = 646
Score = 68.9 bits (144), Expect(2) = 8e-025
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +1 / -2
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++LW+ WAT+ G VK DW+ APF SYR + A ACV
Sbjct: 465 FPTKQPMRIYSSLWNADDWATRGGLVKTDWTQAPFTASYRNFKASACV 322
Score = 64.8 bits (135), Expect(2) = 8e-025
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +1 / -2
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FI 351
W + LDA+ + W +Q YM YNYC D RFPQG PAEC R+ F+
Sbjct: 264 WQVQALDASGRNRLRWVQQKYMIYNYCTDLKRFPQGIPAECKRSRFL 124
>gb|CV255121.1|CV255121 WS02412.B21_C01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02412_C01 3', mRNA sequence
Length = 561
Score = 68.9 bits (144), Expect(2) = 8e-025
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +1 / -3
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++LW+ WAT+ G VK DW+ APF SYR + A ACV
Sbjct: 490 FPTKQPMRIYSSLWNADDWATRGGLVKTDWTQAPFTASYRNFKASACV 347
Score = 64.8 bits (135), Expect(2) = 8e-025
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +1 / -3
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FI 351
W + LDA+ + W +Q YM YNYC D RFPQG PAEC R+ F+
Sbjct: 289 WQVQALDASGRNRLRWVQQKYMIYNYCTDLKRFPQGIPAECKRSRFL 149
>gb|CV236471.1|CV236471 WS01224.B21.1_D19 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01224_D19 3', mRNA sequence
Length = 915
Score = 68.9 bits (144), Expect(2) = 1e-024
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +1 / -1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++LW+ WAT+ G VK DW+ APF SYR + A ACV
Sbjct: 474 FPTKQPMRIYSSLWNADDWATRGGLVKTDWTQAPFTASYRNFKASACV 331
Score = 64.3 bits (134), Expect(2) = 1e-024
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +1 / -1
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FI 351
W + LDA+ + W +Q YM YNYC D RFPQG PAEC R+ F+
Sbjct: 273 WQVQGLDASGRNRLRWVQQKYMIYNYCTDLKRFPQGIPAECKRSRFL 133
>gb|CV265667.1|CV265667 WS02027.B21_O12 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02027_O12 3', mRNA sequence
Length = 691
Score = 68.4 bits (143), Expect(2) = 1e-024
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +1 / -1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++LW+ WAT+ G VK DW+ APF SYR + A ACV
Sbjct: 454 FPTKQPMRIYSSLWNADDWATRGGIVKTDWTQAPFTASYRNFKASACV 311
Score = 64.8 bits (135), Expect(2) = 1e-024
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +1 / -1
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FI 351
W + LDA+ + W +Q YM YNYC D RFPQG PAEC R+ F+
Sbjct: 253 WQVQALDASGRNRLRWVQQKYMIYNYCTDLKRFPQGIPAECKRSRFL 113
>gb|BU809398.1|BU809398 UL57PD01 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 516
Score = 66.1 bits (138), Expect(2) = 3e-024
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +1 / +3
Query: 22 PGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
P + M ++A++W+ WAT+ G VK DW+ APF VSYR ++A AC+
Sbjct: 63 PKRQSMRIYASIWNADDWATRGGLVKTDWTQAPFTVSYRNFNAQACI 203
Score = 65.7 bits (137), Expect(2) = 3e-024
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +1 / +3
Query: 205 DRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
+RW S++LD++ + W ++NYM YNYC D RFPQG P EC+
Sbjct: 243 NRWYSQELDSSSQKQLKWVQENYMVYNYCTDTKRFPQGLPHECN 374
>gb|CV261338.1|CV261338 WS02016.B21_I04 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02016_I04 3', mRNA sequence
Length = 826
Score = 64.8 bits (135), Expect(2) = 1e-023
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +1 / -1
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FI 351
W + LDA+ + W +Q YM YNYC D RFPQG PAEC R+ F+
Sbjct: 274 WQVQALDASGRNRLRWVQQKYMVYNYCTDLKRFPQGIPAECKRSRFL 134
Score = 64.8 bits (135), Expect(2) = 1e-023
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +1 / -1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++ W+ WAT+ G VK DW+ APF YR + A+ACV
Sbjct: 475 FPTKQPMRIYSSFWNADDWATRGGLVKTDWTQAPFTAFYRNFKANACV 332
>gb|CK105400.1|CK105400 UA11BPC02.5pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA11BPC02 5', mRNA sequence
Length = 496
Score = 65.2 bits (136), Expect(2) = 1e-023
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1 / +2
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
S + ++ W+S+ L + G + W ++NYM YNYC D RFPQG P ECS
Sbjct: 200 SSGSSSNSWLSQSLGSTGQGRIKWVQKNYMIYNYCTDTKRFPQGSPPECS 349
Score = 64.3 bits (134), Expect(2) = 1e-023
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +1 / +2
Query: 31 KPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+PM ++++LW WAT+ G +K DWS APF SYR ++A AC
Sbjct: 41 QPMWIYSSLWSADDWATRGGLIKTDWSQAPFTASYRNFNAQAC 169
>gb|BP935850.1|BP935850 BP935850 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-082_B24.r 3', mRNA sequence
Length = 608
Score = 68.0 bits (142), Expect(2) = 2e-023
Identities = 26/56 (46%), Positives = 34/56 (60%)
Frame = +1 / -2
Query: 202 TDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIGLLVSP 369
++ W S +LD+ + W R+NYM YNYC D RFPQG P ECS +* +L P
Sbjct: 427 SNAWFSEELDSTRQERLKWVRENYMVYNYCKDVNRFPQGLPTECSMS*KEDVLALP 260
Score = 60.6 bits (126), Expect(2) = 2e-023
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +1 / -2
Query: 37 MSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
M ++++LW+ WAT+ G VK DW+ AP SYR ++A+ACV
Sbjct: 607 MRIYSSLWNADDWATRGGLVKTDWALAPVTASYRNFNAEACV 482
>gb|DT522694.1|DT522694 WS02037.B21_L04 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02037_L04 3', mRNA sequence
Length = 796
Score = 65.7 bits (137), Expect(2) = 3e-023
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +1 / -2
Query: 202 TDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
T+ W+S +L + + W ++NYM YNYC D RFPQG P ECS +*
Sbjct: 336 TNAWLSEELGSTSQERLEWVKKNYMIYNYCTDAKRFPQGLPPECSAS* 193
Score = 62.5 bits (130), Expect(2) = 3e-023
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +1 / -2
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSA 150
+P +PM ++++LW+ WAT+ G VK DWS APF SY+ ++A
Sbjct: 543 FPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTASYKNFNA 412
>gb|CV253328.1|CV253328 WS0221.B21_J11 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0221_J11 3', mRNA sequence
Length = 686
Score = 68.0 bits (142), Expect(2) = 2e-022
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +1 / -3
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+P +PM ++++LW+ WAT+ G VK DW+ APF YR + ADAC
Sbjct: 636 FPKSQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFKADAC 496
Score = 57.9 bits (120), Expect(2) = 2e-022
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1 / -3
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
W + LDA + W ++ +M YNYC D RFPQGFP EC R+ F
Sbjct: 432 WHTNALDAPSRRRLRWVQKYFMIYNYCADLKRFPQGFPPECRRSRF 295
>gb|DN488621.1|DN488621 S016C11.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S016C11 3', mRNA sequence
Length = 820
Score = 63.8 bits (133), Expect(2) = 2e-022
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +1 / -1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSA 150
+P +PM ++++LW+ WAT+ G VK DWS APF SYR ++A
Sbjct: 487 FPKNQPMRIYSSLWNADDWATRGGLVKTDWSQAPFTASYRNFNA 356
Score = 61.6 bits (128), Expect(2) = 2e-022
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +1 / -1
Query: 196 AGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
+ T+ W+S +L + + W ++NYM YNYC D RFPQG P C+ +*
Sbjct: 286 SNTNAWLSEELGSTSQQRLEWVKKNYMIYNYCTDAKRFPQGLPPGCNAS* 137
>gb|CV230048.1|CV230048 WS01915.B21_E06 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01915_E06 3', mRNA sequence
Length = 681
Score = 68.0 bits (142), Expect(2) = 6e-022
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +1 / -2
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+P +PM ++++LW+ WAT+ G VK DW+ APF YR + ADAC
Sbjct: 599 FPKSQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFKADAC 459
Score = 56.1 bits (116), Expect(2) = 6e-022
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1 / -2
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
W + LDA + W ++ +M YNYC D RFPQG P EC R+ F
Sbjct: 395 WQTNALDAPSRRRLRWVQKYFMIYNYCADLKRFPQGLPPECRRSRF 258
>gb|CF236335.1|CF236335 PtaJXT11E9E0909 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 755
Score = 68.0 bits (142), Expect(2) = 8e-022
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +1 / +1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+P +PM ++++LW+ WAT+ G VK DW+ APF YR + ADAC
Sbjct: 175 FPKSQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFKADAC 315
Score = 55.6 bits (115), Expect(2) = 8e-022
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1 / +1
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
W + LDA + W ++ +M YNYC D RFPQG P EC R+ F
Sbjct: 379 WKTNALDAPSRRRLRWVQKYFMIYNYCADLKRFPQGLPPECRRSRF 516
>gb|CV256088.1|CV256088 WS0242.B21_O11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0242_O11 3', mRNA sequence
Length = 909
Score = 68.0 bits (142), Expect(2) = 1e-021
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +1 / -1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+P +PM ++++LW+ WAT+ G VK DW+ APF YR + ADAC
Sbjct: 591 FPKSQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFKADAC 451
Score = 55.1 bits (114), Expect(2) = 1e-021
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1 / -1
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
W + LDA + W ++ +M YNYC D RFPQG P EC R+ F
Sbjct: 387 WHTNALDAPSRRRLRWVQKYFMIYNYCADLKRFPQGLPPECRRSRF 250
>gb|CV270106.1|CV270106 WS0151.B21_B16 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0151_B16 3', mRNA sequence
Length = 875
Score = 68.0 bits (142), Expect(2) = 1e-021
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +1 / -1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+P +PM ++++LW+ WAT+ G VK DW+ APF YR + ADAC
Sbjct: 605 FPKSQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFKADAC 465
Score = 55.1 bits (114), Expect(2) = 1e-021
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1 / -1
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
W + LDA + W ++ +M YNYC D RFPQG P EC R+ F
Sbjct: 401 WHTNALDAPSRRRLRWVQKYFMIYNYCADLKRFPQGLPPECRRSRF 264
>gb|CV237332.1|CV237332 WS01227.B21.1_I01 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01227_I01 3', mRNA sequence
Length = 870
Score = 68.0 bits (142), Expect(2) = 1e-021
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +1 / -1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+P +PM ++++LW+ WAT+ G VK DW+ APF YR + ADAC
Sbjct: 591 FPKSQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFKADAC 451
Score = 55.1 bits (114), Expect(2) = 1e-021
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1 / -1
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
W + LDA + W ++ +M YNYC D RFPQG P EC R+ F
Sbjct: 387 WHTNALDAPSRRRLRWVQKYFMIYNYCADLKRFPQGLPPECRRSRF 250
>gb|CV236170.1|CV236170 WS01223.B21_B16 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01223_B16 3', mRNA sequence
Length = 838
Score = 68.0 bits (142), Expect(2) = 1e-021
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +1 / -2
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+P +PM ++++LW+ WAT+ G VK DW+ APF YR + ADAC
Sbjct: 591 FPKSQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFKADAC 451
Score = 55.1 bits (114), Expect(2) = 1e-021
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1 / -2
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
W + LDA + W ++ +M YNYC D RFPQG P EC R+ F
Sbjct: 387 WHTNALDAPSRRRLRWVQKYFMIYNYCADLKRFPQGLPPECRRSRF 250
>gb|DT518701.1|DT518701 WS02438.B21_P13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02438_P13 3', mRNA sequence
Length = 790
Score = 68.0 bits (142), Expect(2) = 1e-021
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +1 / -1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+P +PM ++++LW+ WAT+ G VK DW+ APF YR + ADAC
Sbjct: 592 FPKSQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFKADAC 452
Score = 55.1 bits (114), Expect(2) = 1e-021
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1 / -1
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
W + LDA + W ++ +M YNYC D RFPQG P EC R+ F
Sbjct: 388 WHTNALDAPSRRRLRWVQKYFMIYNYCADLKRFPQGLPPECRRSRF 251
>gb|CN519614.1|CN519614 GQ0104.B3_J05 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_J05 5', mRNA sequence
Length = 710
Score = 68.0 bits (142), Expect(2) = 1e-021
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +1 / +1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+P +PM ++++LW+ WAT+ G VK DW+ APF YR + ADAC
Sbjct: 139 FPKSQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFKADAC 279
Score = 55.1 bits (114), Expect(2) = 1e-021
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1 / +1
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
W + LDA + W ++ +M YNYC D RFPQG P EC R+ F
Sbjct: 343 WHTNALDAPSRRRLRWVQKYFMIYNYCADLKRFPQGLPPECRRSRF 480
>gb|CV248079.1|CV248079 WS0112.B21_F17 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0112_F17 3', mRNA sequence
Length = 710
Score = 68.0 bits (142), Expect(2) = 1e-021
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +1 / -1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+P +PM ++++LW+ WAT+ G VK DW+ APF YR + ADAC
Sbjct: 590 FPKSQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFKADAC 450
Score = 55.1 bits (114), Expect(2) = 1e-021
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1 / -1
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
W + LDA + W ++ +M YNYC D RFPQG P EC R+ F
Sbjct: 386 WHTNALDAPSRRRLRWVQKYFMIYNYCADLKRFPQGLPPECRRSRF 249
>gb|CV253198.1|CV253198 WS0221.B21_C22 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0221_C22 3', mRNA sequence
Length = 703
Score = 68.0 bits (142), Expect(2) = 1e-021
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +1 / -2
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+P +PM ++++LW+ WAT+ G VK DW+ APF YR + ADAC
Sbjct: 594 FPKSQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFKADAC 454
Score = 55.1 bits (114), Expect(2) = 1e-021
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1 / -2
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
W + LDA + W ++ +M YNYC D RFPQG P EC R+ F
Sbjct: 390 WHTNALDAPSRRRLRWVQKYFMIYNYCADLKRFPQGLPPECRRSRF 253
>gb|CV253554.1|CV253554 WS0222.B21_E22 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0222_E22 3', mRNA sequence
Length = 701
Score = 68.0 bits (142), Expect(2) = 1e-021
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +1 / -2
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+P +PM ++++LW+ WAT+ G VK DW+ APF YR + ADAC
Sbjct: 592 FPKSQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFKADAC 452
Score = 55.1 bits (114), Expect(2) = 1e-021
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1 / -2
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
W + LDA + W ++ +M YNYC D RFPQG P EC R+ F
Sbjct: 388 WHTNALDAPSRRRLRWVQKYFMIYNYCADLKRFPQGLPPECRRSRF 251
>gb|BU862546.1|BU862546 S017A09 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 521
Score = 66.6 bits (139), Expect(2) = 1e-021
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +1 / +2
Query: 22 PGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
P +PM ++++LW+ WAT+ G VK DW+ APF YR + ADAC
Sbjct: 2 PKSQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFKADAC 139
Score = 56.1 bits (116), Expect(2) = 1e-021
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1 / +2
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
W + LDA + W ++ +M YNYC D RFPQG P EC R+ F
Sbjct: 203 WQTNALDAPSRRRLRWVQKYFMIYNYCADLKRFPQGLPPECRRSRF 340
>gb|DT509897.1|DT509897 WS02425.BR_A16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_A16 5', mRNA sequence
Length = 888
Score = 68.0 bits (142), Expect(2) = 9e-021
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +1 / +1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++LW+ WAT+ G VK DWS APF YR + A+AC+
Sbjct: 409 FPKNQPMKLYSSLWNADQWATRGGLVKADWSKAPFTAYYRNFKANACL 552
Score = 51.9 bits (107), Expect(2) = 9e-021
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1 / +1
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAEC 333
W ++ LD+ ++ W ++ YM YNYC D RFP G P EC
Sbjct: 613 WQTQGLDSTSRRSLRWVQKYYMIYNYCTDYKRFPMGRPREC 735
>gb|DT514517.1|DT514517 WS02425.B21_A16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_A16 3', mRNA sequence
Length = 810
Score = 68.0 bits (142), Expect(2) = 9e-021
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +1 / -1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++LW+ WAT+ G VK DWS APF YR + A+AC+
Sbjct: 492 FPKNQPMKLYSSLWNADQWATRGGLVKADWSKAPFTAYYRNFKANACL 349
Score = 51.9 bits (107), Expect(2) = 9e-021
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1 / -1
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAEC 333
W ++ LD+ ++ W ++ YM YNYC D RFP G P EC
Sbjct: 288 WQTQGLDSTSRRSLRWVQKYYMIYNYCTDYKRFPMGRPREC 166
>gb|CV257704.1|CV257704 WS0247.B21_G18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0247_G18 3', mRNA sequence
Length = 679
Score = 68.0 bits (142), Expect(2) = 9e-021
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +1 / -3
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+P +PM ++++LW+ WAT+ G VK DWS APF YR + A+AC+
Sbjct: 572 FPKNQPMKLYSSLWNADQWATRGGLVKADWSKAPFTAYYRNFKANACL 429
Score = 51.9 bits (107), Expect(2) = 9e-021
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1 / -3
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAEC 333
W ++ LD+ ++ W ++ YM YNYC D RFP G P EC
Sbjct: 368 WQTQGLDSTSRRSLRWVQKYYMIYNYCTDYKRFPMGRPREC 246
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 290,364,073
Number of Sequences: 369679
Number of extensions: 3912930
Number of successful extensions: 45795
Number of sequences better than 1.0e-020: 51
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 8938642720
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)