TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448387.2.1
(919 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT522980.1|DT522980 WS02038.B21_H07 PTxN-IB-N-A-11 Popul... 134 2e-046
gb|CK098950.1|CK098950 A044P69.5pR Hybrid aspen plasmid lib... 133 3e-046
gb|AY043495.1| Populus tomentosa 4-coumarate:CoA ligase mRN... 133 4e-046
gb|DQ076679.1| Populus tomentosa 4-coumarate:CoA ligase mRN... 132 7e-046
gb|AF041049.1|AF041049 Populus tremuloides clone Pt4CL1 4-c... 131 3e-045
gb|AF314180.1|AF314180 Populus tomentosa 4-coumarate:CoA li... 130 3e-045
gb|AF283552.1|AF283552 Populus balsamifera subsp. trichocar... 134 4e-045
gb|CX183816.1|CX183816 G03_45-41_13.ab1 leaf inoculated wit... 127 9e-045
gb|AF008184.1|AF008184 Populus x generosa strain H11 4-coum... 126 1e-044
gb|AY575768.1| Populus tomentosa 4-coumarate:CoA ligase mRN... 127 8e-044
gb|AF008183.1|AF008183 Populus x generosa strain H11 4-coum... 128 5e-043
gb|BU825705.1|BU825705 UK112TB04 Populus apical shoot cDNA ... 125 4e-042
gb|AF041050.1|AF041050 Populus tremuloides clone Pt4CL2 4-c... 124 7e-042
gb|DT490518.1|DT490518 WS02545.B21_C23 PT-MB-N-A-15 Populus... 131 2e-041
gb|DT525811.1|DT525811 WS02046.C21_F17 PTxN-IB-N-A-11 Popul... 123 2e-040
gb|DT516250.1|DT516250 WS02430.B21_N09 PTxD-ICC-N-A-14 Popu... 123 2e-040
gb|CV259494.1|CV259494 WS02011.B21_I04 PTxN-IB-N-A-11 Popul... 123 2e-040
gb|CV275703.1|CV275703 WS0177.B21_F13 PTxD-NR-A-8 Populus t... 133 4e-040
gb|CV242183.1|CV242183 WS02514.B21.1_F24 PT-MB-N-A-15 Popul... 122 4e-040
gb|CV281784.1|CV281784 WS0182.B21_N17 PTxD-IL-N-A-9 Populus... 133 4e-040
gb|DT476835.1|DT476835 WS01231.B21_A11 PT-GT-FL-A-3 Populus... 122 4e-040
gb|CK091788.1|CK091788 F126P02.3pR Populus flower cDNA libr... 122 4e-040
gb|DT473557.1|DT473557 WS0123.BR_A07 PT-GT-FL-A-3 Populus t... 122 4e-040
gb|DN492675.1|DN492675 X031B04.3pR Populus wood cDNA librar... 133 8e-040
gb|DN502685.1|DN502685 X031B04.5pR Populus wood cDNA librar... 133 8e-040
gb|DT518216.1|DT518216 WS02436.B21_I12 PTxD-ICC-N-A-14 Popu... 133 1e-039
gb|CK097680.1|CK097680 UB58DPD05.3pR Populus active cambium... 133 1e-039
gb|AJ771595.1|AJ771595 AJ771595 Populus euphratica root 3-6... 133 3e-039
gb|BU886245.1|BU886245 R042F08 Populus root cDNA library Po... 106 2e-038
gb|CA926345.1|CA926345 MTU6CR.P13.H10 Aspen root cDNA Libra... 133 3e-037
gb|CA926669.1|CA926669 MTU6CR.P17.G08 Aspen root cDNA Libra... 133 3e-037
gb|BP934384.1|BP934384 BP934384 full-length enriched poplar... 123 4e-037
gb|AF283553.1|AF283553 Populus balsamifera subsp. trichocar... 69 8e-037
gb|CF228422.1|CF228422 PtaXM0012G6G0614 Poplar cDNA library... 133 3e-036
gb|DT520315.1|DT520315 WS02447.B21_D12 PTxD-ICC-N-A-14 Popu... 127 4e-036
gb|CV257679.1|CV257679 WS0247.B21_F15 PTxD-ICC-N-A-14 Popul... 129 1e-035
gb|CK320851.1|CK320851 X9SP07d03 Populus stem seasonal libr... 128 5e-035
gb|CV235091.1|CV235091 WS01217.B21_K15 PT-GT-FL-A-3 Populus... 123 4e-034
gb|CF232102.1|CF232102 PtaJXO0006E12E1210 Poplar cDNA libra... 133 8e-034
gb|BU895482.1|BU895482 X024F12 Populus wood cDNA library Po... 133 1e-032
gb|DT488469.1|DT488469 WS02536.B21_I10 PT-MB-N-A-15 Populus... 131 2e-032
gb|CV258935.1|CV258935 WS0201.B21_O13 PTxN-IB-N-A-11 Populu... 131 5e-032
gb|CK098073.1|CK098073 A003P32.5pR Hybrid aspen plasmid lib... 94 9e-032
gb|BI136793.1|BI136793 F074P14Y Populus flower cDNA library... 122 2e-031
gb|AI162913.1|AI162913 A026P71U Hybrid aspen plasmid librar... 90 2e-031
gb|BI138058.1|BI138058 F097P77Y Populus flower cDNA library... 122 2e-031
gb|CK101501.1|CK101501 F074P14.5pR Populus flower cDNA libr... 121 4e-031
gb|AY043494.1| Populus tomentosa 4-coumarate:CoA ligase gen... 67 8e-031
gb|CV258748.1|CV258748 WS0201.B21_G13 PTxN-IB-N-A-11 Populu... 133 1e-030
gb|AI163594.1|AI163594 A044p69u Hybrid aspen plasmid librar... 80 2e-030
gb|CK094730.1|CK094730 I052P17.3pR Populus senescing leaves... 133 2e-030
gb|CV235313.1|CV235313 WS01218.B21_K03 PT-GT-FL-A-3 Populus... 122 3e-030
gb|CK319475.1|CK319475 X9P11b11 Populus stem seasonal libra... 131 8e-030
gb|DT487920.1|DT487920 WS02535.B21_A11 PT-MB-N-A-15 Populus... 131 8e-030
gb|CN517718.1|CN517718 GQ0094.B3_A06 GQ009 Populus trichoca... 130 1e-029
gb|CN520078.1|CN520078 GQ0108.B3_B17 GQ010 Populus trichoca... 123 2e-029
gb|BP934766.1|BP934766 BP934766 full-length enriched poplar... 123 3e-029
gb|BP936106.1|BP936106 BP936106 full-length enriched poplar... 127 1e-028
gb|CV275860.1|CV275860 WS0177.B21_N22 PTxD-NR-A-8 Populus t... 119 2e-026
gb|BI136474.1|BI136474 F068P90Y Populus flower cDNA library... 105 2e-026
gb|CX655944.1|CX655944 PO02043D05 Poplar SC cDNA library Po... 116 3e-026
gb|BU877600.1|BU877600 V036F12 Populus flower cDNA library ... 74 2e-025
gb|CK115531.1|CK115531 Y011B11 Populus infected leaf substr... 114 1e-024
gb|CF236853.1|CF236853 PtaJXT8A3A0301 Poplar cDNA library f... 111 5e-024
gb|BU868518.1|BU868518 M116H01 Populus flower cDNA library ... 108 5e-023
gb|CA825131.1|CA825131 R53H10 two-month-old roots from clon... 81 3e-021
>gb|DT522980.1|DT522980 WS02038.B21_H07 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02038_H07 3', mRNA sequence
Length = 910
Score = 134 bits (288), Expect(2) = 2e-046
Identities = 54/99 (54%), Positives = 78/99 (78%)
Frame = -2 / -3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+LL+HP + DAAV G+ DE+AGEVP + VV+ + +E ++
Sbjct: 659 KELIKYKGFQVAPAELEALLLAHPEISDAAVVGMKDEDAGEVPVAFVVKSEKSQATEDEI 480
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDE 436
Y++ +V YK+++ + F++AIPK+ SGKILR+ LR++
Sbjct: 479 KQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLREK 363
Score = 72.1 bits (151), Expect(2) = 2e-046
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = -2 / -3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP+N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 845 ETGASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKQGWLHT 714
>gb|CK098950.1|CK098950 A044P69.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A044P69 5', mRNA sequence
Length = 550
Score = 133 bits (285), Expect(2) = 3e-046
Identities = 53/99 (53%), Positives = 78/99 (78%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HP + DAAV GL DE+AGEVP + VV+ + +E ++
Sbjct: 230 KELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEI 409
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDE 436
Y++ +V YK+++ + F++AIPK+ SGKILR+ L+++
Sbjct: 410 KQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEK 526
Score = 72.5 bits (152), Expect(2) = 3e-046
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP+N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 44 ETGASLPRNQPGEICIRGDQIMEGYLNDPEATSRTIDKEGWLHT 175
>gb|AY043495.1| Populus tomentosa 4-coumarate:CoA ligase mRNA, complete cds
Length = 1740
Score = 133 bits (285), Expect(2) = 4e-046
Identities = 53/99 (53%), Positives = 78/99 (78%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HP + DAAV GL DE+AGEVP + VV+ + +E ++
Sbjct: 1316 KELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEI 1495
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDE 436
Y++ +V YK+++ + F++AIPK+ SGKILR+ L+++
Sbjct: 1496 KQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEK 1612
Score = 72.1 bits (151), Expect(2) = 4e-046
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP+N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 1130 ETGASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHT 1261
>gb|DQ076679.1| Populus tomentosa 4-coumarate:CoA ligase mRNA, complete cds
Length = 1631
Score = 132 bits (283), Expect(2) = 7e-046
Identities = 53/99 (53%), Positives = 77/99 (77%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HP + DAAV GL DE AGEVP + VV+ + +E ++
Sbjct: 1310 KELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDENAGEVPVAFVVKSEKSQATEDEI 1489
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDE 436
Y++ +V YK+++ + F++AIPK+ SGKILR+ L+++
Sbjct: 1490 KQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEK 1606
Score = 72.1 bits (151), Expect(2) = 7e-046
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP+N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 1124 ETGASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHT 1255
>gb|AF041049.1|AF041049 Populus tremuloides clone Pt4CL1 4-coumarate:CoA ligase mRNA,
complete cds
Length = 1915
Score = 131 bits (281), Expect(2) = 3e-045
Identities = 52/99 (52%), Positives = 77/99 (77%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAP ELEA+L++HP + DAAV GL DE+AGEVP + VV+ + +E ++
Sbjct: 1379 KELIKYKGFQVAPTELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEI 1558
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDE 436
Y++ +V YK+++ + F++AIPK+ SGKILR+ L+++
Sbjct: 1559 KQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEK 1675
Score = 71.2 bits (149), Expect(2) = 3e-045
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP+N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 1193 ETGVSLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHT 1324
>gb|AF314180.1|AF314180 Populus tomentosa 4-coumarate:CoA ligase (4cl) mRNA, complete cds
Length = 1619
Score = 130 bits (279), Expect(2) = 3e-045
Identities = 51/99 (51%), Positives = 77/99 (77%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HP + DAAV G+ DE+AGEVP + V+ + +E ++
Sbjct: 1307 KELIKYKGFQVAPAELEALLIAHPEISDAAVVGMKDEDAGEVPVAFAVKSEKSQATEDEI 1486
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDE 436
Y++ +V YK+++ + F++AIPK+ SGKILR+ L+++
Sbjct: 1487 KQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEK 1603
Score = 72.1 bits (151), Expect(2) = 3e-045
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP+N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 1121 ETGASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHT 1252
>gb|AF283552.1|AF283552 Populus balsamifera subsp. trichocarpa x Populus deltoides
4-coumarate:CoA ligase 3 mRNA, complete cds
Length = 1862
Score = 134 bits (287), Expect(2) = 4e-045
Identities = 54/98 (55%), Positives = 77/98 (78%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+LL+HP + DAAV G+ DE+AGEVP + VV+ + +E ++
Sbjct: 1318 KELIKYKGFQVAPAELEALLLAHPQISDAAVVGMKDEDAGEVPVAFVVKSEKSQATEDEI 1497
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRD 439
Y++ +V YK+++ + F++AIPK+ SGKILR+ LR+
Sbjct: 1498 KQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLRE 1611
Score = 68.0 bits (142), Expect(2) = 4e-045
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SL +N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 1132 ETGASLRRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHT 1263
>gb|CX183816.1|CX183816 G03_45-41_13.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 678
Score = 127 bits (271), Expect(2) = 9e-045
Identities = 53/97 (54%), Positives = 72/97 (74%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HP + D AV + DE AGEVP + VVR G+ +E ++
Sbjct: 205 KELIKYKGFQVAPAELEAMLIAHPDISDCAVVPMKDEAAGEVPIAFVVRANGSKMTEDEI 384
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
Y++ +V YK++ + F +AIPK+ SGKILR+ LR
Sbjct: 385 KQYISKQVVFYKRISRVFFTEAIPKAPSGKILRKDLR 495
Score = 73.9 bits (155), Expect(2) = 9e-045
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTGRSLP+N GEIC+R +M+GY E TERT+D GWLHT
Sbjct: 19 DTGRSLPRNQSGEICIRGSQIMKGYLNDPEATERTVDNDGWLHT 150
>gb|AF008184.1|AF008184 Populus x generosa strain H11 4-coumarate:CoA ligase 1 (4CL1) mRNA,
complete cds
Length = 2042
Score = 126 bits (270), Expect(2) = 1e-044
Identities = 53/97 (54%), Positives = 72/97 (74%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HP + D AV + DE AGEVP + VVR G+ +E ++
Sbjct: 1343 KELIKYKGFQVAPAELEAMLIAHPDISDCAVVPMKDEAAGEVPIAFVVRANGSKITEDEI 1522
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
Y++ +V YK++ + F +AIPK+ SGKILR+ LR
Sbjct: 1523 KQYISKQVVFYKRISRVFFTEAIPKAPSGKILRKDLR 1633
Score = 73.9 bits (155), Expect(2) = 1e-044
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTGRSLP+N GEIC+R +M+GY E TERT+D GWLHT
Sbjct: 1157 DTGRSLPRNQSGEICIRGSQIMKGYLNDPEATERTVDNDGWLHT 1288
>gb|AY575768.1| Populus tomentosa 4-coumarate:CoA ligase mRNA, partial cds
Length = 1200
Score = 127 bits (273), Expect(2) = 8e-044
Identities = 52/99 (52%), Positives = 75/99 (75%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKG QVAPAELEA+L++HP + DAAV GL DE AGEVP + VV+ +E ++
Sbjct: 889 KELIKYKGSQVAPAELEALLIAHPEISDAAVVGLKDENAGEVPVAFVVKSEKPQATEDEI 1068
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDE 436
Y++ +V YK+++ + F++AIPK+ SGKILR+ L+++
Sbjct: 1069 KQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEK 1185
Score = 69.8 bits (146), Expect(2) = 8e-044
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP+N PGE C+R +M+GY E T RTID GWLHT
Sbjct: 703 ETGASLPRNQPGETCIRGDQIMKGYLNDPEATSRTIDKEGWLHT 834
>gb|AF008183.1|AF008183 Populus x generosa strain H11 4-coumarate:CoA ligase 2 (4CL2) mRNA,
complete cds
Length = 1922
Score = 128 bits (274), Expect(2) = 5e-043
Identities = 54/97 (55%), Positives = 74/97 (76%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HP++ DAAV + DE AGEVP + VVR G+ +E ++
Sbjct: 1334 KELIKYKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEI 1513
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
Y++ +V YK++ + F +AIPK+ SGKILR+ LR
Sbjct: 1514 KQYISKQVIFYKRIGRVFFTEAIPKAPSGKILRKDLR 1624
Score = 66.6 bits (139), Expect(2) = 5e-043
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG S P+N GEIC+R +M+GY E TERTID GWLHT
Sbjct: 1151 ETGESQPRNKTGEICIRGCQIMKGYLNDPEATERTIDKDGWLHT 1282
>gb|BU825705.1|BU825705 UK112TB04 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 576
Score = 125 bits (268), Expect(2) = 4e-042
Identities = 58/108 (53%), Positives = 73/108 (67%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IK+KGFQV PAELEA+L++HPS+ DAAV DE AGEVP + VVR SE +
Sbjct: 242 KEIIKFKGFQVPPAELEALLVNHPSIADAAVVPQKDEVAGEVPVAFVVRSDDLDLSEEAV 421
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTAAA* 409
Y+A +V YKKL + FV +IPKS SGKILR+ LR + T +*
Sbjct: 422 KEYIAKQVVFYKKLHKVXFVHSIPKSASGKILRKDLRAKLATATTMS* 565
Score = 66.6 bits (139), Expect(2) = 4e-042
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TGRSL N PGEIC+R +M+GY E T TID GWLHT
Sbjct: 56 ETGRSLGYNQPGEICIRGSQIMKGYLNDAEATANTIDVEGWLHT 187
>gb|AF041050.1|AF041050 Populus tremuloides clone Pt4CL2 4-coumarate:CoA ligase mRNA,
complete cds
Length = 1713
Score = 124 bits (266), Expect(2) = 7e-042
Identities = 58/108 (53%), Positives = 73/108 (67%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IK+KGFQV PAELEA+L++HPS+ DAAV DE AGEVP + VVR SE +
Sbjct: 1390 KEIIKFKGFQVPPAELEALLVNHPSIADAAVVPQKDEVAGEVPVAFVVRSDDLDLSEEAV 1569
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTAAA* 409
Y+A +V YKKL + FV +IPKS SGKILR+ LR + T +*
Sbjct: 1570 KEYIAKQVVFYKKLHKVFFVHSIPKSASGKILRKDLRAKLATATTMS* 1713
Score = 66.6 bits (139), Expect(2) = 7e-042
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TGRSL N PGEIC+R +M+GY E T TID GWLHT
Sbjct: 1204 ETGRSLGYNQPGEICIRGSQIMKGYLNDAEATANTIDVEGWLHT 1335
>gb|DT490518.1|DT490518 WS02545.B21_C23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02545_C23 3', mRNA sequence
Length = 778
Score = 131 bits (280), Expect(2) = 2e-041
Identities = 54/96 (56%), Positives = 74/96 (77%)
Frame = -2 / -1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKG+QV PAELEA+LL+HP + DAAV PD++AG+ P + VVR+ G+ SE +
Sbjct: 487 KELIKYKGYQVPPAELEALLLAHPEISDAAVIPFPDKDAGQFPMAYVVRKAGSNLSEKAV 308
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
++AG+VA YK++R + F+ AIPK+ SGKILR+ L
Sbjct: 307 EDFIAGQVAPYKRIRRVAFIAAIPKNPSGKILRKDL 200
Score = 58.8 bits (122), Expect(2) = 2e-041
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = -2 / -1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
++G++LP N GE+ +R+ +VM+GY+R E T TID+ GWL T
Sbjct: 673 ESGKALPVNQTGELWLRAPSVMKGYFRNAEATSSTIDSEGWLRT 542
>gb|DT525811.1|DT525811 WS02046.C21_F17 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02046_F17 3', mRNA sequence
Length = 862
Score = 123 bits (264), Expect(2) = 2e-040
Identities = 57/108 (52%), Positives = 73/108 (67%)
Frame = -2 / -2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IK+KGFQV PAELEA+L++HPS+ DAAV DE AGEVP + VVR +E +
Sbjct: 507 KEIIKFKGFQVPPAELEALLVNHPSIADAAVVPQKDEVAGEVPVAFVVRSNDLDLNEEAV 328
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTAAA* 409
Y+A +V YKKL + FV +IPKS SGKILR+ LR + T +*
Sbjct: 327 KDYIAKQVVFYKKLHKVFFVHSIPKSASGKILRKDLRAKLATATTIS* 184
Score = 62.9 bits (131), Expect(2) = 2e-040
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -2 / -2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SL +N PGEIC+R +M+GY E T ID GWLHT
Sbjct: 693 ETGSSLGRNQPGEICIRGSQIMKGYLNDAEATANIIDVEGWLHT 562
>gb|DT516250.1|DT516250 WS02430.B21_N09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_N09 3', mRNA sequence
Length = 795
Score = 123 bits (264), Expect(2) = 2e-040
Identities = 57/108 (52%), Positives = 73/108 (67%)
Frame = -2 / -2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IK+KGFQV PAELEA+L++HPS+ DAAV DE AGEVP + VVR +E +
Sbjct: 575 KEIIKFKGFQVPPAELEALLVNHPSIADAAVVPQKDEVAGEVPVAFVVRSNDLDLNEEAV 396
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTAAA* 409
Y+A +V YKKL + FV +IPKS SGKILR+ LR + T +*
Sbjct: 395 KDYIAKQVVFYKKLHKVFFVHSIPKSASGKILRKDLRAKLATATTMS* 252
Score = 62.9 bits (131), Expect(2) = 2e-040
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -2 / -2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SL +N PGEIC+R +M+GY E T ID GWLHT
Sbjct: 761 ETGSSLGRNQPGEICIRGSQIMKGYLNDAEATANIIDVEGWLHT 630
>gb|CV259494.1|CV259494 WS02011.B21_I04 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02011_I04 3', mRNA sequence
Length = 733
Score = 123 bits (264), Expect(2) = 2e-040
Identities = 57/108 (52%), Positives = 73/108 (67%)
Frame = -2 / -3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IK+KGFQV PAELEA+L++HPS+ DAAV DE AGEVP + VVR +E +
Sbjct: 518 KEIIKFKGFQVPPAELEALLVNHPSIADAAVVPQKDEVAGEVPVAFVVRSNDLDLNEEAV 339
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTAAA* 409
Y+A +V YKKL + FV +IPKS SGKILR+ LR + T +*
Sbjct: 338 KDYIAKQVVFYKKLHKVFFVHSIPKSASGKILRKDLRAKLATATTIS* 195
Score = 62.9 bits (131), Expect(2) = 2e-040
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -2 / -3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SL +N PGEIC+R +M+GY E T ID GWLHT
Sbjct: 704 ETGSSLGRNQPGEICIRGSQIMKGYLNDAEATANIIDVEGWLHT 573
>gb|CV275703.1|CV275703 WS0177.B21_F13 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0177_F13 3', mRNA sequence
Length = 875
Score = 133 bits (286), Expect(2) = 4e-040
Identities = 56/103 (54%), Positives = 74/103 (71%)
Frame = -2 / -3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELE +L+SHP + DA V PD EAGEVP + VVR + +E D+
Sbjct: 507 KELIKYKGFQVAPAELEGLLVSHPQILDAVVIPYPDAEAGEVPVAYVVRSPNSALTEVDV 328
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
++A +VA +K+LR + F++ +PKS SGKILRR+L + K
Sbjct: 327 QKFIADQVAPFKRLRKVTFINTVPKSASGKILRRELIQQVKSK 199
Score = 51.5 bits (106), Expect(2) = 4e-040
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -2 / -3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+T + LP N GEI VR +M+GY+ + T+ TID GW+HT
Sbjct: 693 ETLKPLPPNQLGEIWVRGPNMMRGYFNNPQATKDTIDKKGWVHT 562
>gb|CV242183.1|CV242183 WS02514.B21.1_F24 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02514_F24 3', mRNA sequence
Length = 876
Score = 122 bits (261), Expect(2) = 4e-040
Identities = 56/108 (51%), Positives = 73/108 (67%)
Frame = -2 / -3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IK+KGFQV PAELEA+L++HPS+ DAAV DE AGEVP + VVR +E +
Sbjct: 538 KEIIKFKGFQVPPAELEALLVNHPSIADAAVVPQKDEVAGEVPVAFVVRSNDLDLNEEAV 359
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTAAA* 409
Y+A +V YKKL + FV +IPKS +GKILR+ LR + T +*
Sbjct: 358 KDYIAKQVVFYKKLHKVFFVHSIPKSAAGKILRKDLRAKLATATTMS* 215
Score = 62.9 bits (131), Expect(2) = 4e-040
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -2 / -3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SL +N PGEIC+R +M+GY E T ID GWLHT
Sbjct: 724 ETGSSLGRNQPGEICIRGSQIMKGYLNDAEATANIIDVEGWLHT 593
>gb|CV281784.1|CV281784 WS0182.B21_N17 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0182_N17 3', mRNA sequence
Length = 859
Score = 133 bits (286), Expect(2) = 4e-040
Identities = 56/103 (54%), Positives = 74/103 (71%)
Frame = -2 / -2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELE +L+SHP + DA V PD EAGEVP + VVR + +E D+
Sbjct: 522 KELIKYKGFQVAPAELEGLLVSHPQILDAVVIPYPDAEAGEVPVAYVVRSPNSALTEVDV 343
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
++A +VA +K+LR + F++ +PKS SGKILRR+L + K
Sbjct: 342 QKFIADQVAPFKRLRKVTFINTVPKSASGKILRRELIQQVKSK 214
Score = 51.5 bits (106), Expect(2) = 4e-040
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -2 / -2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+T + LP N GEI VR +M+GY+ + T+ TID GW+HT
Sbjct: 708 ETLKPLPPNQLGEIWVRGPNMMRGYFNNPQATKDTIDKKGWVHT 577
>gb|DT476835.1|DT476835 WS01231.B21_A11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_A11 3', mRNA sequence
Length = 860
Score = 122 bits (261), Expect(2) = 4e-040
Identities = 56/108 (51%), Positives = 73/108 (67%)
Frame = -2 / -3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IK+KGFQV PAELEA+L++HPS+ DAAV DE AGEVP + VVR +E +
Sbjct: 399 KEIIKFKGFQVPPAELEALLVNHPSIADAAVVPQKDEVAGEVPVAFVVRSNDLDLNEEAV 220
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTAAA* 409
Y+A +V YKKL + FV +IPKS +GKILR+ LR + T +*
Sbjct: 219 KDYIAKQVVFYKKLHKVFFVHSIPKSAAGKILRKDLRAKLATATTMS* 76
Score = 62.9 bits (131), Expect(2) = 4e-040
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -2 / -3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SL +N PGEIC+R +M+GY E T ID GWLHT
Sbjct: 585 ETGSSLGRNQPGEICIRGSQIMKGYLNDAEATANIIDVEGWLHT 454
>gb|CK091788.1|CK091788 F126P02.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F126P02 3', mRNA sequence
Length = 850
Score = 122 bits (261), Expect(2) = 4e-040
Identities = 56/108 (51%), Positives = 73/108 (67%)
Frame = -2 / -1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IK+KGFQV PAELEA+L++HPS+ DAAV DE AGEVP + VVR +E +
Sbjct: 565 KEIIKFKGFQVPPAELEALLVNHPSIADAAVVPQKDEVAGEVPVAFVVRSNDLDLNEEAV 386
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTAAA* 409
Y+A +V YKKL + FV +IPKS +GKILR+ LR + T +*
Sbjct: 385 KDYIAKQVVFYKKLHKVFFVHSIPKSAAGKILRKDLRAKLATATTMS* 242
Score = 62.9 bits (131), Expect(2) = 4e-040
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -2 / -1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SL +N PGEIC+R +M+GY E T ID GWLHT
Sbjct: 751 ETGSSLGRNQPGEICIRGSQIMKGYLNDAEATANIIDVEGWLHT 620
>gb|DT473557.1|DT473557 WS0123.BR_A07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0123_A07 5', mRNA sequence
Length = 695
Score = 122 bits (261), Expect(2) = 4e-040
Identities = 56/108 (51%), Positives = 73/108 (67%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IK+KGFQV PAELEA+L++HPS+ DAAV DE AGEVP + VVR +E +
Sbjct: 361 KEIIKFKGFQVPPAELEALLVNHPSIADAAVVPQKDEVAGEVPVAFVVRSNDLDLNEEAV 540
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTAAA* 409
Y+A +V YKKL + FV +IPKS +GKILR+ LR + T +*
Sbjct: 541 KDYIAKQVVFYKKLHKVFFVHSIPKSAAGKILRKDLRAKLATATTMS* 684
Score = 62.9 bits (131), Expect(2) = 4e-040
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SL +N PGEIC+R +M+GY E T ID GWLHT
Sbjct: 175 ETGSSLGRNQPGEICIRGSQIMKGYLNDAEATANIIDVEGWLHT 306
>gb|DN492675.1|DN492675 X031B04.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X031B04 3', mRNA sequence
Length = 733
Score = 133 bits (285), Expect(2) = 8e-040
Identities = 55/96 (57%), Positives = 72/96 (75%)
Frame = -2 / -1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELE +L+SHP + DA V PD EAGEVP + VVR + +E D+
Sbjct: 496 KELIKYKGFQVAPAELEGLLVSHPQILDAVVIPYPDAEAGEVPVAYVVRAPNSALTEVDV 317
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
++A +VA +K+LR + F++ +PKS SGKILRR+L
Sbjct: 316 QRFIADQVAPFKRLRKVTFINTVPKSASGKILRREL 209
Score = 51.0 bits (105), Expect(2) = 8e-040
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -2 / -1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+T + LP N GEI VR +M+GY+ + T+ TID GW+HT
Sbjct: 682 ETLKLLPPNQLGEIWVRGPNMMRGYFNNPQATKDTIDKKGWVHT 551
>gb|DN502685.1|DN502685 X031B04.5pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X031B04 5', mRNA sequence
Length = 718
Score = 133 bits (285), Expect(2) = 8e-040
Identities = 55/96 (57%), Positives = 72/96 (75%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELE +L+SHP + DA V PD EAGEVP + VVR + +E D+
Sbjct: 238 KELIKYKGFQVAPAELEGLLVSHPQILDAVVIPYPDAEAGEVPVAYVVRAPNSALTEVDV 417
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
++A +VA +K+LR + F++ +PKS SGKILRR+L
Sbjct: 418 QRFIADQVAPFKRLRKVTFINTVPKSASGKILRREL 525
Score = 51.0 bits (105), Expect(2) = 8e-040
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+T + LP N GEI VR +M+GY+ + T+ TID GW+HT
Sbjct: 52 ETLKLLPPNQLGEIWVRGPNMMRGYFNNPQATKDTIDKKGWVHT 183
>gb|DT518216.1|DT518216 WS02436.B21_I12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02436_I12 3', mRNA sequence
Length = 888
Score = 133 bits (286), Expect(2) = 1e-039
Identities = 56/103 (54%), Positives = 74/103 (71%)
Frame = -2 / -1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELE +L+SHP + DA V PD EAGEVP + VVR + +E D+
Sbjct: 507 KELIKYKGFQVAPAELEGLLVSHPQILDAVVIPYPDAEAGEVPVAYVVRSPNSALTEVDV 328
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
++A +VA +K+LR + F++ +PKS SGKILRR+L + K
Sbjct: 327 QKFIADQVAPFKRLRKVTFINTVPKSASGKILRRELIQQVKSK 199
Score = 50.1 bits (103), Expect(2) = 1e-039
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = -2 / -1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+T + LP N GEI VR +M+GY+ + T+ T+D GW+HT
Sbjct: 693 ETLKPLPPNQLGEIWVRGPNMMRGYFNNPQATKDTMDKKGWVHT 562
>gb|CK097680.1|CK097680 UB58DPD05.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB58DPD05 3', mRNA sequence
Length = 773
Score = 133 bits (285), Expect(2) = 1e-039
Identities = 58/97 (59%), Positives = 75/97 (77%)
Frame = -2 / -1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKG+QVAPAELE +L SHP + DAAV PDEEAG+VP + VV++ + +E +
Sbjct: 473 KELIKYKGYQVAPAELEQLLQSHPEIADAAVIPYPDEEAGQVPMAFVVKQPQSRINERGV 294
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
M +VA +VA YKK+R + FV AIPKS +GKILR++LR
Sbjct: 293 MDFVAKQVAPYKKVRRVEFVSAIPKSPAGKILRKELR 183
Score = 50.1 bits (103), Expect(2) = 1e-039
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = -2 / -1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTG +LP GE+ VR +M+GY EE T+D GWL T
Sbjct: 659 DTGDALPPGKQGELWVRGSTIMKGYVGDLEENSTTMDPDGWLRT 528
>gb|AJ771595.1|AJ771595 AJ771595 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600003B05F1, mRNA sequence
Length = 640
Score = 133 bits (285), Expect(2) = 3e-039
Identities = 54/99 (54%), Positives = 77/99 (77%)
Frame = -2 / -3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+LL+HP + DAAV G+ DE+AGEVP + VV+ + +E ++
Sbjct: 476 KELIKYKGFQVAPAELEALLLAHPEISDAAVVGMKDEDAGEVPVAFVVKSEKSQATEDEI 297
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDE 436
Y+ +V YK+++ + F++AIPK+ SGKILR+ LR++
Sbjct: 296 KQYIYEQVIFYKRIKRVFFIEAIPKAPSGKILRKNLREK 180
Score = 49.2 bits (101), Expect(2) = 3e-039
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -2 / -1
Query: 897 KNPPGEICVRSQAVMQGYYRRKEETERTIDAAGW 796
+N PGEIC+R +M+GY E T R ID GW
Sbjct: 640 RNKPGEICIRGDQIMKGYLNDPEATSRPIDKEGW 539
>gb|BU886245.1|BU886245 R042F08 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 558
Score = 106 bits (226), Expect(3) = 2e-038
Identities = 44/91 (48%), Positives = 65/91 (71%)
Frame = -2 / +1
Query: 714 KGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADMMAYVAG 535
+GFQVAPAELEA+L++HP + D AV +E AGEVP + VVR G+ +E ++ Y++
Sbjct: 196 QGFQVAPAELEAMLIAHPDISDCAVVPKKEEAAGEVPVAFVVRANGSKITEDEIKQYISK 375
Query: 534 RVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
+V YK++ + F ++IPK+ SGKILR+ LR
Sbjct: 376 QVVFYKRISRVFFTESIPKAPSGKILRKDLR 468
Score = 66.6 bits (139), Expect(3) = 2e-038
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = -2 / +2
Query: 909 RSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
RSLP+N GEIC+R +M+GY E TERTID GWLHT
Sbjct: 2 RSLPRNQAGEICIRGSQIMKGYLNDPEATERTIDNDGWLHT 124
Score = 24.9 bits (48), Expect(3) = 2e-038
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -2 / +2
Query: 732 KELIKYKGFQ 703
KELIKYKGF+
Sbjct: 179 KELIKYKGFK 208
>gb|CA926345.1|CA926345 MTU6CR.P13.H10 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 547
Score = 133 bits (285), Expect(2) = 3e-037
Identities = 53/99 (53%), Positives = 78/99 (78%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HP + DAAV GL DE+AGEVP + VV+ + +E ++
Sbjct: 144 KELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEI 323
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDE 436
Y++ +V YK+++ + F++AIPK+ SGKILR+ L+++
Sbjct: 324 KQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEK 440
Score = 42.3 bits (86), Expect(2) = 3e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2 / +3
Query: 873 VRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+R +M+GY E T RTID GWLHT
Sbjct: 3 IRGDQIMKGYLNDPEATSRTIDKEGWLHT 89
>gb|CA926669.1|CA926669 MTU6CR.P17.G08 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 547
Score = 133 bits (285), Expect(2) = 3e-037
Identities = 53/99 (53%), Positives = 78/99 (78%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HP + DAAV GL DE+AGEVP + VV+ + +E ++
Sbjct: 144 KELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEI 323
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDE 436
Y++ +V YK+++ + F++AIPK+ SGKILR+ L+++
Sbjct: 324 KQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEK 440
Score = 42.3 bits (86), Expect(2) = 3e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2 / +3
Query: 873 VRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+R +M+GY E T RTID GWLHT
Sbjct: 3 IRGDQIMKGYLNDPEATSRTIDKEGWLHT 89
>gb|BP934384.1|BP934384 BP934384 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-064_I21.r 3', mRNA sequence
Length = 633
Score = 123 bits (264), Expect(2) = 4e-037
Identities = 57/108 (52%), Positives = 73/108 (67%)
Frame = -2 / -1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IK+KGFQV PAELEA+L++HPS+ DAAV DE AGEVP + VVR +E +
Sbjct: 462 KEIIKFKGFQVPPAELEALLVNHPSIADAAVVPQKDEVAGEVPVAFVVRSNDLDLNEEAV 283
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTAAA* 409
Y+A +V YKKL + FV +IPKS SGKILR+ LR + T +*
Sbjct: 282 KDYIAKQVVFYKKLHKVFFVHSIPKSASGKILRKDLRAKLATATTIS* 139
Score = 51.5 bits (106), Expect(2) = 4e-037
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -2 / -1
Query: 903 LPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
L +N PGEI +R +M+GY+ E T ID GWLHT
Sbjct: 633 LGRNQPGEIGIRGSQIMKGYWNDAEATANIIDVEGWLHT 517
>gb|AF283553.1|AF283553 Populus balsamifera subsp. trichocarpa x Populus deltoides
4-coumarate:CoA ligase 4 mRNA, complete cds
Length = 1917
Score = 69.3 bits (145), Expect(3) = 8e-037
Identities = 34/73 (46%), Positives = 44/73 (60%)
Frame = -2 / +1
Query: 627 DEEAGEVPASCVVRRRGAPESEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQ 448
DE AGEVP + VVR +E + Y+A +V YKKL + FV +IPKS SGKILR+
Sbjct: 1522 DEVAGEVPVAFVVRSNDLDLNEEAVKDYIAKQVVFYKKLHKVFFVHSIPKSASGKILRKD 1701
Query: 447 LRDEFVKKTAAA* 409
LR + T +*
Sbjct: 1702 LRAKLATATTMS* 1740
Score = 62.9 bits (131), Expect(3) = 8e-037
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SL +N PGEIC+R +M+GY E T ID GWLHT
Sbjct: 1204 ETGSSLGRNQPGEICIRGSQIMKGYLNDAEATANIIDVEGWLHT 1335
Score = 60.2 bits (125), Expect(3) = 8e-037
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAV 640
KE+IK+KGFQV PAELEA+L++HPS+ DAAV
Sbjct: 1390 KEIIKFKGFQVPPAELEALLVNHPSIADAAV 1482
>gb|CF228422.1|CF228422 PtaXM0012G6G0614 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 133 bits (285), Expect(2) = 3e-036
Identities = 53/99 (53%), Positives = 78/99 (78%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HP + DAAV GL DE+AGEVP + VV+ + +E ++
Sbjct: 254 KELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEI 433
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDE 436
Y++ +V YK+++ + F++AIPK+ SGKILR+ L+++
Sbjct: 434 KQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEK 550
Score = 39.1 bits (79), Expect(2) = 3e-036
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / +2
Query: 858 VMQGYYRRKEETERTIDAAGWLHT 787
+M+GY E T RTID GWLHT
Sbjct: 128 IMKGYLNDPEATSRTIDKEGWLHT 199
>gb|DT520315.1|DT520315 WS02447.B21_D12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02447_D12 3', mRNA sequence
Length = 674
Score = 127 bits (273), Expect(2) = 4e-036
Identities = 54/96 (56%), Positives = 72/96 (75%)
Frame = -2 / -3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYK +QV P ELE +LLS+P + DAAV PDEEAG++P + VVR+ G+ +EA +
Sbjct: 429 KELIKYKAYQVPPVELEQLLLSNPEIADAAVIPYPDEEAGQIPMAYVVRKPGSNITEAQI 250
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
M +A +VA YKK+R + F D IP+S +GKILRR+L
Sbjct: 249 MDSIAKQVAPYKKIRRVAFTDGIPRSPAGKILRREL 142
Score = 44.1 bits (90), Expect(2) = 4e-036
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = -2 / -3
Query: 915 TGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
TG + GE+ +R ++M+GY R ++ T T+D+ GWL T
Sbjct: 612 TGEAFGPGKRGELWLRGPSIMKGYVRDEKATAETLDSEGWLKT 484
>gb|CV257679.1|CV257679 WS0247.B21_F15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0247_F15 3', mRNA sequence
Length = 818
Score = 129 bits (277), Expect(2) = 1e-035
Identities = 55/96 (57%), Positives = 73/96 (76%)
Frame = -2 / -1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYK +QV P ELE +LLS+P + DAAV PDEEAG++P + VVR+ G+ +EA +
Sbjct: 470 KELIKYKAYQVPPFELEQLLLSNPEIADAAVIPYPDEEAGQIPVAYVVRKPGSSITEAQI 291
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
M +A +VA YKK+R + F DAIP+S +GKILRR+L
Sbjct: 290 MDSIAKQVAPYKKIRRVAFTDAIPRSPAGKILRREL 183
Score = 40.9 bits (83), Expect(2) = 1e-035
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2 / -1
Query: 915 TGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
TG + GE+ +R ++M+GY ++ T T+D+ GWL T
Sbjct: 653 TGEAFGPGKRGELWLRGPSIMKGYVGDEKATAETLDSEGWLKT 525
>gb|CK320851.1|CK320851 X9SP07d03 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 879
Score = 128 bits (274), Expect(2) = 5e-035
Identities = 56/96 (58%), Positives = 72/96 (75%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYK FQV PAELE +L S+P + DAAV PD EAGE+P + VVR+ G+ +EA +
Sbjct: 348 KELIKYKAFQVPPAELEKLLQSNPEIADAAVIPYPDVEAGEIPMAYVVRKPGSNITEAQI 527
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
M +A +VA YKK+R + F+ AIPKS +GKILRR+L
Sbjct: 528 MDSIAKQVAPYKKIRRVAFISAIPKSPAGKILRREL 635
Score = 40.0 bits (81), Expect(2) = 5e-035
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG +L GE+ +R VM+GY ++ T T+ GWL T
Sbjct: 162 ETGEALDPGQRGELWLRGPTVMKGYVGDEKATAETLHPEGWLKT 293
>gb|CV235091.1|CV235091 WS01217.B21_K15 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01217_K15 3', mRNA sequence
Length = 718
Score = 123 bits (264), Expect(2) = 4e-034
Identities = 57/108 (52%), Positives = 73/108 (67%)
Frame = -2 / -1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IK+KGFQV PAELEA+L++HPS+ DAAV DE AGEVP + VVR +E +
Sbjct: 550 KEIIKFKGFQVPPAELEALLVNHPSIADAAVVPQKDEVAGEVPVAFVVRSNDLDLNEEAV 371
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTAAA* 409
Y+A +V YKKL + FV +IPKS SGKILR+ LR + T +*
Sbjct: 370 KDYIAKQVVFYKKLHKVFFVHSIPKSASGKILRKDLRAKLATATTMS* 227
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2 / -1
Query: 876 CVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
C+R +M+GY E T ID GWLHT
Sbjct: 694 CIRGSQIMKGYLNDAEATANIIDVEGWLHT 605
>gb|CF232102.1|CF232102 PtaJXO0006E12E1210 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 586
Score = 133 bits (285), Expect(2) = 8e-034
Identities = 53/99 (53%), Positives = 78/99 (78%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HP + DAAV GL DE+AGEVP + VV+ + +E ++
Sbjct: 110 KELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEI 289
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDE 436
Y++ +V YK+++ + F++AIPK+ SGKILR+ L+++
Sbjct: 290 KQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEK 406
Score = 30.9 bits (61), Expect(2) = 8e-034
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 831 EETERTIDAAGWLHT 787
E T RTID GWLHT
Sbjct: 11 EATSRTIDKEGWLHT 55
>gb|BU895482.1|BU895482 X024F12 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 566
Score = 133 bits (285), Expect(2) = 1e-032
Identities = 53/99 (53%), Positives = 78/99 (78%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HP + DAAV GL DE+AGEVP + VV+ + +E ++
Sbjct: 91 KELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEI 270
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDE 436
Y++ +V YK+++ + F++AIPK+ SGKILR+ L+++
Sbjct: 271 KQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEK 387
Score = 26.7 bits (52), Expect(2) = 1e-032
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +1
Query: 819 RTIDAAGWLHT 787
RTID GWLHT
Sbjct: 4 RTIDKEGWLHT 36
>gb|DT488469.1|DT488469 WS02536.B21_I10 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02536_I10 3', mRNA sequence
Length = 796
Score = 131 bits (280), Expect(2) = 2e-032
Identities = 57/96 (59%), Positives = 73/96 (76%)
Frame = -2 / -2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYK FQV PAELE +L S+P + DAAV PDEEAGE+P + VVR+ G+ +EA +
Sbjct: 657 KELIKYKAFQVPPAELEKLLQSNPEIADAAVIPYPDEEAGEIPMAYVVRKPGSNITEAQI 478
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
M +A +VA YKK+R + F+ AIPKS +GKILRR+L
Sbjct: 477 MDSIAKQVAPYKKIRRVDFISAIPKSPAGKILRREL 370
Score = 28.6 bits (56), Expect(2) = 2e-032
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2 / -2
Query: 870 RSQAVMQGYYRRKEETERTIDAAGWLHT 787
R VM+GY ++ T T+ GWL T
Sbjct: 795 RGPTVMKGYVGDEKATAETLHPEGWLKT 712
>gb|CV258935.1|CV258935 WS0201.B21_O13 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0201_O13 3', mRNA sequence
Length = 855
Score = 131 bits (281), Expect(2) = 5e-032
Identities = 57/96 (59%), Positives = 73/96 (76%)
Frame = -2 / -2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYK FQV PAELE +L S+P + DAAV PDEEAGE+P + VVR+ G+ +EA +
Sbjct: 725 KELIKYKAFQVPPAELEKLLQSNPEIADAAVIPYPDEEAGEIPMAYVVRKPGSNITEAQI 546
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
M +A +VA YKK+R + F+ AIPKS +GKILRR+L
Sbjct: 545 MDSIAKQVAPYKKIRRVAFISAIPKSPAGKILRREL 438
Score = 26.7 bits (52), Expect(2) = 5e-032
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2 / -2
Query: 858 VMQGYYRRKEETERTIDAAGWLHT 787
VM+GY ++ T T+ GWL T
Sbjct: 851 VMKGYVGDEKATAETLHPEGWLKT 780
>gb|CK098073.1|CK098073 A003P32.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A003P32 5', mRNA sequence
Length = 543
Score = 93.6 bits (198), Expect(2) = 9e-032
Identities = 38/63 (60%), Positives = 49/63 (77%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HP + DAAV GL DE+AGEVP + VV+ + +E ++
Sbjct: 266 KELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEI 445
Query: 552 MAY 544
Y
Sbjct: 446 KQY 454
Score = 63.8 bits (133), Expect(2) = 9e-032
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWL 793
+TG SLP+N PGEIC+R +M+ Y E T RTID GWL
Sbjct: 81 ETGASLPRNQPGEICIRGDQIMEAYLNDPEATSRTIDKEGWL 206
>gb|BI136793.1|BI136793 F074P14Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 515
Score = 122 bits (261), Expect(2) = 2e-031
Identities = 56/108 (51%), Positives = 73/108 (67%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IK+KGFQV PAELEA+L++HPS+ DAAV DE AGEVP + VVR +E +
Sbjct: 132 KEIIKFKGFQVPPAELEALLVNHPSIADAAVVPQKDEVAGEVPVAFVVRSNDLDLNEEAV 311
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTAAA* 409
Y+A +V YKKL + FV +IPKS +GKILR+ LR + T +*
Sbjct: 312 KDYIAKQVVFYKKLHKVFFVHSIPKSAAGKILRKDLRAKLATATTMS* 455
Score = 34.1 bits (68), Expect(2) = 2e-031
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2 / +3
Query: 858 VMQGYYRRKEETERTIDAAGWLHT 787
+M+GY E T ID GWLHT
Sbjct: 6 IMKGYLNDAEATANIIDVEGWLHT 77
>gb|AI162913.1|AI162913 A026P71U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 450
Score = 90.4 bits (191), Expect(2) = 2e-031
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HP + DAAV GL DE+AGEVP + VV+ + E ++
Sbjct: 200 KELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSXAXEDEI 379
Score = 66.1 bits (138), Expect(2) = 2e-031
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP+N PGEIC+R +M+ Y E T RTI GWLHT
Sbjct: 14 ETGASLPRNQPGEICIRGDQIMEXYLNDPEATSRTIXKEGWLHT 145
>gb|BI138058.1|BI138058 F097P77Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 453
Score = 122 bits (260), Expect(2) = 2e-031
Identities = 55/104 (52%), Positives = 71/104 (68%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IK+KGFQV PAELEA+L++HPS+ DAAV DE AGEVP + VVR +E +
Sbjct: 132 KEIIKFKGFQVPPAELEALLVNHPSIADAAVVPQKDEVAGEVPVAFVVRSNDLDLNEEAV 311
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKT 421
Y+A +V YKKL + FV +IPKS +GKILR+ LR + T
Sbjct: 312 KDYIAKQVVFYKKLHKVFFVHSIPKSAAGKILRKDLRAKLATAT 443
Score = 34.1 bits (68), Expect(2) = 2e-031
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2 / +3
Query: 858 VMQGYYRRKEETERTIDAAGWLHT 787
+M+GY E T ID GWLHT
Sbjct: 6 IMKGYLNDAEATANIIDVEGWLHT 77
>gb|CK101501.1|CK101501 F074P14.5pR Populus flower cDNA library Populus trichocarpa cDNA
clone F074P14 5', mRNA sequence
Length = 424
Score = 121 bits (258), Expect(2) = 4e-031
Identities = 54/97 (55%), Positives = 69/97 (71%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IK+KGFQV PAELEA+L++HPS+ DAAV DE AGEVP + VVR +E +
Sbjct: 132 KEIIKFKGFQVPPAELEALLVNHPSIADAAVVPQKDEVAGEVPVAFVVRSNDLDLNEEAV 311
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
Y+A +V YKKL + FV +IPKS +GKILR+ LR
Sbjct: 312 KDYIAKQVVFYKKLHKVFFVHSIPKSAAGKILRKDLR 422
Score = 34.1 bits (68), Expect(2) = 4e-031
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2 / +3
Query: 858 VMQGYYRRKEETERTIDAAGWLHT 787
+M+GY E T ID GWLHT
Sbjct: 6 IMKGYLNDAEATANIIDVEGWLHT 77
>gb|AY043494.1| Populus tomentosa 4-coumarate:CoA ligase gene, complete cds
Length = 4397
Score = 66.6 bits (139), Expect(5) = 8e-031
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG 634
KELIKYKGFQVAPAELEA+L++HP + DAAV G
Sbjct: 3760 KELIKYKGFQVAPAELEALLIAHPEISDAAVVG 3858
Score = 42.8 bits (87), Expect(5) = 8e-031
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQG 847
+TG SLP+N PGEIC+R +M+G
Sbjct: 3450 ETGASLPRNQPGEICIRGDQIMKG 3521
Score = 41.8 bits (85), Expect(5) = 8e-031
Identities = 15/33 (45%), Positives = 27/33 (81%)
Frame = -2 / +1
Query: 534 RVASYKKLRLLRFVDAIPKSVSGKILRRQLRDE 436
+V YK+++ + F++AIPK+ SGKILR+ L+++
Sbjct: 4171 QVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEK 4269
Score = 35.0 bits (70), Expect(5) = 8e-031
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = -2 / +1
Query: 639 FGLPDEEAGEVPASCVVRRRGAPESEADMMAYVAGRV 529
F L DE+AGEVP + VV+ + +E ++ Y++ +V
Sbjct: 3952 FRLKDEDAGEVPVAFVVKSEKSQATEDEIKQYISKQV 4062
Score = 35.0 bits (70), Expect(5) = 8e-031
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -2 / +1
Query: 849 GYYRRKEETERTIDAAGWLHT 787
GY E T RTID GWLHT
Sbjct: 3643 GYLNDPEATSRTIDKEGWLHT 3705
>gb|CV258748.1|CV258748 WS0201.B21_G13 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0201_G13 3', mRNA sequence
Length = 722
Score = 133 bits (286), Expect = 1e-030
Identities = 55/96 (57%), Positives = 74/96 (77%)
Frame = -2 / -1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKG+QV PAELEA+LL+HP + DAAV PDE+ G+ P + VVR+ G+ SE +
Sbjct: 677 KELIKYKGYQVPPAELEALLLTHPEISDAAVIPFPDEQVGQFPMAYVVRKAGSKLSEKAV 498
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
M ++AG+VA YK++R + +V AIPK+ SGKILR+ L
Sbjct: 497 MDFIAGQVAPYKRIRRVAYVAAIPKNPSGKILRKDL 390
>gb|AI163594.1|AI163594 A044p69u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 415
Score = 80.3 bits (169), Expect(2) = 2e-030
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEV 607
KELIKYKGFQVAPAELEA+L++HP + DAAV GL DE+ GEV
Sbjct: 193 KELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDPGEV 318
Score = 72.5 bits (152), Expect(2) = 2e-030
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP+N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 7 ETGASLPRNQPGEICIRGDQIMEGYLNDPEATSRTIDKEGWLHT 138
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 367,083,322
Number of Sequences: 369679
Number of extensions: 4399440
Number of successful extensions: 28935
Number of sequences better than 1.0e-020: 73
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 12290633740
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)