TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419390.2.1
(1603 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN499780.1|DN499780 T086B12.5pR Populus shoot meristem c... 263 5e-093
gb|BU831998.1|BU831998 T028C05 Populus apical shoot cDNA li... 265 1e-089
gb|DN489856.1|DN489856 T086B12.3pR Populus shoot meristem c... 233 6e-084
gb|DN487923.1|DN487923 R016C04.3pR Populus root cDNA librar... 215 1e-078
gb|DT519931.1|DT519931 WS02446.B21.1_B10 PTxD-ICC-N-A-14 Po... 188 2e-068
gb|CA929222.1|CA929222 MTU2CA.P10.G01 Aspen apex cDNA Libra... 237 2e-061
gb|CA929904.1|CA929904 MTU2CA.P4.C05 Aspen apex cDNA Librar... 236 4e-061
gb|CA924888.1|CA924888 MTU7TL.P11.A05 Aspen leaf cDNA Libra... 233 2e-060
gb|CA929212.1|CA929212 MTU2CA.P10.E10 Aspen apex cDNA Libra... 232 5e-060
gb|CA930094.1|CA930094 MTU2CA.P7.A04 Aspen apex cDNA Librar... 232 7e-060
gb|CA929539.1|CA929539 MTU2CA.P15.C04 Aspen apex cDNA Libra... 230 2e-059
gb|BU836407.1|BU836407 T086B12 Populus apical shoot cDNA li... 218 7e-056
gb|CA930208.1|CA930208 MTU2CA.P8.E12 Aspen apex cDNA Librar... 218 7e-056
gb|CV235788.1|CV235788 WS01221.B21_J06 PT-GT-FL-A-3 Populus... 206 3e-052
gb|DT469656.1|DT469656 WS01918.C21_H17 PT-DX-N-A-10 Populus... 202 6e-051
gb|DT496637.1|DT496637 WS01123.BR_P16 PT-P-FL-A-2 Populus t... 199 3e-050
gb|CV249391.1|CV249391 WS01123.B21_P16 PT-P-FL-A-2 Populus ... 188 8e-047
gb|CA929851.1|CA929851 MTU2CA.P3.F04 Aspen apex cDNA Librar... 187 2e-046
gb|BU834047.1|BU834047 T056A04 Populus apical shoot cDNA li... 68 2e-027
gb|DN499770.1|DN499770 T085D07.5pR Populus shoot meristem c... 73 6e-026
gb|BU836337.1|BU836337 T085D07 Populus apical shoot cDNA li... 73 7e-026
>gb|DN499780.1|DN499780 T086B12.5pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T086B12 5', mRNA sequence
Length = 752
Score = 263 bits (569), Expect(2) = 5e-093
Identities = 99/150 (66%), Positives = 124/150 (82%)
Frame = -1 / +3
Query: 1090 KSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAI 911
+SWYDSEGK+TS+A + + + + G +SMYSDRV LSHITS+P++G++KP FFS+ A
Sbjct: 24 ESWYDSEGKETSMASVGSGLSPSTKSGARSMYSDRVSLSHITSNPSLGEDKPTFFSIRAY 203
Query: 910 ISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAW 731
IS IKPDQ MWYRAC TCNKKVT+A G GYWCEGCQKND+ECSLRYIMV+K+SD +GE W
Sbjct: 204 ISFIKPDQTMWYRACKTCNKKVTDALGGGYWCEGCQKNDAECSLRYIMVVKVSDASGEGW 383
Query: 730 VSVFNEHAEKIIGCSADELDRIRKEEGDDS 641
VS FNE AEKII CSADELD ++ + G+++
Sbjct: 384 VSAFNEEAEKIICCSADELDLLKSQIGEEN 473
Score = 167 bits (359), Expect(3) = 7e-058
Identities = 74/108 (68%), Positives = 80/108 (74%)
Frame = +3 / -2
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYLSEHSESFFWHPSHQYPDPKASVTFLLQVVQ 869
Q MIFSA SLN +TQ SP+ SE+ T+MYL HS SFFWHPSHQYP P+ASVTFLL V+Q
Sbjct: 424 QQMIFSASSLNAETQPSPLASETFTTIMYLKLHSASFFWHPSHQYPPPRASVTFLLHVLQ 245
Query: 870 ARYHIF*SGLMWLMMAYRLKKTGFSWPIAGSLVM*DRKTLSEYMDLKP 1013
ARYHI SGLM LM A LK G S P G LVM*DR T SEYMDL P
Sbjct: 244 ARYHIVWSGLMKLMYALMLKNVGLSSPKDGLLVM*DRDTRSEYMDLAP 101
Score = 99.6 bits (211), Expect(2) = 5e-093
Identities = 39/59 (66%), Positives = 51/59 (86%)
Frame = -1 / +3
Query: 649 DDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKL 473
+++Y +LKEATW PHL R+SV+Q+EY NEKRQR+TVR APVDF AES++LLEEI+K+
Sbjct: 468 ENTYQQRLKEATWNPHLLRISVSQNEYNNEKRQRMTVRAVAPVDFVAESRFLLEEISKM 644
Score = 95.0 bits (201), Expect(2) = 4e-028
Identities = 44/111 (39%), Positives = 62/111 (55%)
Frame = +2 / -1
Query: 671 IKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQRALRVILLAPLAPVSRPKSFSHL 850
+K + A NDL +E +P+LT+ I HH+V AL +ILLA P+S P+S S+
Sbjct: 443 VKFISRATNDLFSFFIECRNPTLTTRIRNFYHHNVP*AALCIILLASFTPISTPQSISNF 264
Query: 851 LVTGRASTVPHILIRLDVAYDGIQTEENRLFLAHSRITGDVRQKNSIRIHG 1003
+ AS +PH L+R D AY E+ RL L + VR + SIR+HG
Sbjct: 263 FIARLASPIPHCLVRFDEAYVCSNAEKCRLVLPQGWVACYVR*RYSIRVHG 111
Score = 70.7 bits (148), Expect(3) = 7e-058
Identities = 35/54 (64%), Positives = 39/54 (72%)
Frame = +3 / -2
Query: 459 F*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR*GTQVA 620
+*+ F ISSSK LDSA KSTGA+ LTVILCLFS +YS TL R*G QVA
Sbjct: 658 Y*EPFIFEISSSKNLDSATKSTGATALTVILCLFSLLYSFWETLILKR*GFQVA 497
Score = 51.0 bits (105), Expect(2) = 4e-028
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +2 / -1
Query: 434 QEPPERLRLLASGELRDLFKQVLGLSCEVDRCFTPHGDSLPLLVHVFMLCDADAEQVRNP 613
Q P LL + L +LFKQ GL +++ +PH LPLLV V +L D D++++R P
Sbjct: 683 QIKPHPSILLRTFHL*NLFKQKSGLGNKINWSNSPHCHPLPLLVIVLVLGDTDSQKMRIP 504
Query: 614 GGFLE 628
GF +
Sbjct: 503 SGFFQ 489
Score = 26.3 bits (51), Expect(3) = 7e-058
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / -2
Query: 1050 ASEVSLPSESYQ 1085
A EVSLPSESYQ
Sbjct: 64 AIEVSLPSESYQ 29
>gb|BU831998.1|BU831998 T028C05 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 653
Score = 265 bits (574), Expect(2) = 1e-089
Identities = 100/151 (66%), Positives = 125/151 (82%)
Frame = -1 / +1
Query: 1093 LKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYA 914
L+SWYDSEGK+TS+A + + + + G +SMYSDRV LSHITS+P++G++KP FFS+ A
Sbjct: 4 LRSWYDSEGKETSMASVGSGLSPSTKSGARSMYSDRVSLSHITSNPSLGEDKPTFFSIRA 183
Query: 913 IISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEA 734
IS IKPDQ MWYRAC TCNKKVT+A G GYWCEGCQKND+ECSLRYIMV+K+SD +GE
Sbjct: 184 YISFIKPDQTMWYRACKTCNKKVTDALGGGYWCEGCQKNDAECSLRYIMVVKVSDASGEG 363
Query: 733 WVSVFNEHAEKIIGCSADELDRIRKEEGDDS 641
WVS FNE AEKII CSADELD ++ + G+++
Sbjct: 364 WVSAFNEEAEKIICCSADELDLLKSQIGEEN 456
Score = 167 bits (359), Expect(3) = 9e-057
Identities = 74/108 (68%), Positives = 80/108 (74%)
Frame = +3 / -1
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYLSEHSESFFWHPSHQYPDPKASVTFLLQVVQ 869
Q MIFSA SLN +TQ SP+ SE+ T+MYL HS SFFWHPSHQYP P+ASVTFLL V+Q
Sbjct: 407 QQMIFSASSLNAETQPSPLASETFTTIMYLKLHSASFFWHPSHQYPPPRASVTFLLHVLQ 228
Query: 870 ARYHIF*SGLMWLMMAYRLKKTGFSWPIAGSLVM*DRKTLSEYMDLKP 1013
ARYHI SGLM LM A LK G S P G LVM*DR T SEYMDL P
Sbjct: 227 ARYHIVWSGLMKLMYALMLKNVGLSSPKDGLLVM*DRDTRSEYMDLAP 84
Score = 95.0 bits (201), Expect(2) = 7e-027
Identities = 44/111 (39%), Positives = 62/111 (55%)
Frame = +2 / -3
Query: 671 IKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQRALRVILLAPLAPVSRPKSFSHL 850
+K + A NDL +E +P+LT+ I HH+V AL +ILLA P+S P+S S+
Sbjct: 426 VKFISRATNDLFSFFIECRNPTLTTRIRNFYHHNVP*AALCIILLASFTPISTPQSISNF 247
Query: 851 LVTGRASTVPHILIRLDVAYDGIQTEENRLFLAHSRITGDVRQKNSIRIHG 1003
+ AS +PH L+R D AY E+ RL L + VR + SIR+HG
Sbjct: 246 FIARLASPIPHCLVRFDEAYVCSNAEKCRLVLPQGWVACYVR*RYSIRVHG 94
Score = 86.3 bits (182), Expect(2) = 1e-089
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = -1 / +2
Query: 625 KEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKL 473
K+ W PHL R+SV+Q+EY NEKRQR+TVR APVDF AES++LLEEI+K+
Sbjct: 476 KKPHWNPHLLRISVSQNEYNNEKRQRMTVRAVAPVDFVAESRFLLEEISKM 628
Score = 67.0 bits (140), Expect(3) = 9e-057
Identities = 33/52 (63%), Positives = 37/52 (71%)
Frame = +3 / -3
Query: 459 F*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR*GTQ 614
+*+ F ISSSK LDSA KSTGA+ LTVILCLFS +YS TL R*G Q
Sbjct: 642 Y*EPFIFEISSSKNLDSATKSTGATALTVILCLFSLLYSFWETLILKR*GFQ 487
Score = 46.9 bits (96), Expect(2) = 7e-027
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +2 / -2
Query: 458 LLASGELRDLFKQVLGLSCEVDRCFTPHGDSLPLLVHVFMLCDADAEQVRNPGGFLEL 631
LL + L DLFKQ GL +++ +PH LPLLV V +L D D++++R P L +
Sbjct: 643 LLRTFHL*DLFKQKSGLGNKINWSNSPHCHPLPLLVIVLVLGDTDSQKMRIPMWLLSI 470
Score = 26.3 bits (51), Expect(3) = 9e-057
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / -1
Query: 1050 ASEVSLPSESYQ 1085
A EVSLPSESYQ
Sbjct: 47 AIEVSLPSESYQ 12
>gb|DN489856.1|DN489856 T086B12.3pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T086B12 3', mRNA sequence
Length = 788
Score = 233 bits (503), Expect(2) = 6e-084
Identities = 88/124 (70%), Positives = 106/124 (85%)
Frame = -1 / -1
Query: 1012 GFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAF 833
G +SMYSDRV LSHITS+P++G++KP FFS+ A IS IKPDQ MWYRAC TCNKKVT+A
Sbjct: 764 GARSMYSDRVSLSHITSNPSLGEDKPTFFSIRAYISFIKPDQTMWYRACKTCNKKVTDAL 585
Query: 832 GSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEE 653
G GYWCEGCQKND+ECSLRYIMV+K+SD +GE WVS FNE AEKII CSADELD ++ +
Sbjct: 584 GGGYWCEGCQKNDAECSLRYIMVVKVSDASGEGWVSAFNEEAEKIICCSADELDLLKSQI 405
Query: 652 GDDS 641
G+++
Sbjct: 404 GEEN 393
Score = 167 bits (359), Expect(2) = 1e-055
Identities = 74/108 (68%), Positives = 80/108 (74%)
Frame = +3 / +1
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYLSEHSESFFWHPSHQYPDPKASVTFLLQVVQ 869
Q MIFSA SLN +TQ SP+ SE+ T+MYL HS SFFWHPSHQYP P+ASVTFLL V+Q
Sbjct: 442 QQMIFSASSLNAETQPSPLASETFTTIMYLKLHSASFFWHPSHQYPPPRASVTFLLHVLQ 621
Query: 870 ARYHIF*SGLMWLMMAYRLKKTGFSWPIAGSLVM*DRKTLSEYMDLKP 1013
ARYHI SGLM LM A LK G S P G LVM*DR T SEYMDL P
Sbjct: 622 ARYHIVWSGLMKLMYALMLKNVGLSSPKDGLLVM*DRDTRSEYMDLAP 765
Score = 99.6 bits (211), Expect(2) = 6e-084
Identities = 39/59 (66%), Positives = 51/59 (86%)
Frame = -1 / -1
Query: 649 DDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKL 473
+++Y +LKEATW PHL R+SV+Q+EY NEKRQR+TVR APVDF AES++LLEEI+K+
Sbjct: 398 ENTYQQRLKEATWNPHLLRISVSQNEYNNEKRQRMTVRAVAPVDFVAESRFLLEEISKM 222
Score = 95.0 bits (201), Expect(2) = 2e-028
Identities = 44/111 (39%), Positives = 62/111 (55%)
Frame = +2 / +3
Query: 671 IKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQRALRVILLAPLAPVSRPKSFSHL 850
+K + A NDL +E +P+LT+ I HH+V AL +ILLA P+S P+S S+
Sbjct: 423 VKFISRATNDLFSFFIECRNPTLTTRIRNFYHHNVP*AALCIILLASFTPISTPQSISNF 602
Query: 851 LVTGRASTVPHILIRLDVAYDGIQTEENRLFLAHSRITGDVRQKNSIRIHG 1003
+ AS +PH L+R D AY E+ RL L + VR + SIR+HG
Sbjct: 603 FIARLASPIPHCLVRFDEAYVCSNAEKCRLVLPQGWVACYVR*RYSIRVHG 755
Score = 70.7 bits (148), Expect(2) = 1e-055
Identities = 35/54 (64%), Positives = 39/54 (72%)
Frame = +3 / +1
Query: 459 F*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR*GTQVA 620
+*+ F ISSSK LDSA KSTGA+ LTVILCLFS +YS TL R*G QVA
Sbjct: 208 Y*EPFIFEISSSKNLDSATKSTGATALTVILCLFSLLYSFWETLILKR*GFQVA 369
Score = 51.9 bits (107), Expect(2) = 2e-028
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +2 / +3
Query: 434 QEPPERLRLLASGELRDLFKQVLGLSCEVDRCFTPHGDSLPLLVHVFMLCDADAEQVRNP 613
Q P LL + L +LFKQ GL +++ +PH LPLLV V +L D D++++R P
Sbjct: 183 QTKPHPSILLRTFHL*NLFKQKSGLGNKINWSNSPHCHPLPLLVIVLVLGDTDSQKMRIP 362
Query: 614 GGFLE 628
GF +
Sbjct: 363 SGFFQ 377
>gb|DN487923.1|DN487923 R016C04.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R016C04 3', mRNA sequence
Length = 754
Score = 215 bits (463), Expect(2) = 1e-078
Identities = 79/112 (70%), Positives = 97/112 (86%)
Frame = -1 / -2
Query: 976 SHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKN 797
SHITS+P++G+++P FFS+ A IS IKPDQ MWYRAC TCNKKVT+A G GYWCEGCQKN
Sbjct: 753 SHITSNPSLGEDEPAFFSIRAYISFIKPDQPMWYRACKTCNKKVTDALGGGYWCEGCQKN 574
Query: 796 DSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDS 641
D+ECSLRYIMV+K+SD +GE WVS FNE AEKIIGCSADELD ++ + G+++
Sbjct: 573 DAECSLRYIMVVKVSDASGEGWVSAFNEEAEKIIGCSADELDLLKSQIGEEN 418
Score = 147 bits (315), Expect(2) = 4e-050
Identities = 65/96 (67%), Positives = 72/96 (75%)
Frame = +3 / +2
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYLSEHSESFFWHPSHQYPDPKASVTFLLQVVQ 869
QPMIFSA SLN +TQ SP+ SE+ T+MYL HS SFFWHPSHQYP P+ASVTFLL V+Q
Sbjct: 467 QPMIFSASSLNAETQPSPLASETFTTIMYLKLHSASFFWHPSHQYPPPRASVTFLLHVLQ 646
Query: 870 ARYHIF*SGLMWLMMAYRLKKTGFSWPIAGSLVM*D 977
ARYHI SGLM LM A LK G S P G LV+*D
Sbjct: 647 ARYHIGWSGLMKLMYALMLKNAGSSSPKDGLLVI*D 754
Score = 100 bits (212), Expect(2) = 1e-078
Identities = 39/59 (66%), Positives = 52/59 (88%)
Frame = -1 / -2
Query: 649 DDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKL 473
+++Y +LKEATW PHL R+SV+Q+EY NEKRQR+TV+ APVDFAAES++LLEEI+K+
Sbjct: 423 ENTYQQRLKEATWNPHLLRISVSQNEYNNEKRQRMTVKAVAPVDFAAESRFLLEEISKM 247
Score = 81.3 bits (171), Expect(2) = 6e-023
Identities = 37/92 (40%), Positives = 52/92 (56%)
Frame = +2 / +1
Query: 671 IKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQRALRVILLAPLAPVSRPKSFSHL 850
+K + A NDL +E +P+LT+ I HH+V AL +ILLA P+S P+S S+
Sbjct: 448 VKFISRATNDLFSFFIECRNPTLTTRIRNFYHHNVP*AALCIILLASFTPISTPQSISNF 627
Query: 851 LVTGRASTVPHILIRLDVAYDGIQTEENRLFL 946
+ AS +PH L+R D AY E+ RL L
Sbjct: 628 FIARLASPIPHWLVRFDEAYVCSNAEKCRLVL 723
Score = 72.5 bits (152), Expect(2) = 4e-050
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +3 / +2
Query: 459 F*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR*GTQVA 620
+*+ F ISSSK LDSAAKSTGA+ LTVILCLFS +YS TL R*G QVA
Sbjct: 233 Y*EPFIFEISSSKNLDSAAKSTGATALTVILCLFSLLYSFWETLILKR*GFQVA 394
Score = 47.3 bits (97), Expect(2) = 6e-023
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +2 / +1
Query: 434 QEPPERLRLLASGELRDLFKQVLGLSCEVDRCFTPHGDSLPLLVHVFMLCDADAEQVRNP 613
Q P LL + L +LFKQ GLS +++ + + LPLLV V +L D D++++R P
Sbjct: 208 QTKPHPSILLRTFHL*NLFKQKSGLSSKINWSNSLNCHPLPLLVIVLVLGDTDSQKMRIP 387
Query: 614 GGFLELENVAVV 649
GF + V V+
Sbjct: 388 SGFFQSLLVGVL 423
>gb|DT519931.1|DT519931 WS02446.B21.1_B10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02446_B10 3', mRNA sequence
Length = 782
Score = 188 bits (404), Expect(2) = 2e-068
Identities = 75/109 (68%), Positives = 86/109 (78%)
Frame = -1 / -2
Query: 1012 GFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAF 833
G +SM SDRV LSHITS+P++G++KP FFS+ A IS I P Q MWY AC T NKKVT A
Sbjct: 778 GARSMCSDRVSLSHITSNPSLGEDKPAFFSIRAYISFITPVQTMWYPACKTRNKKVTAAL 599
Query: 832 GSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCS 686
G GYWCEGCQKND+ECSLRYI+V+KLSD +GE WVS NE EKIIG S
Sbjct: 598 GRGYWCEGCQKNDAECSLRYIIVVKLSDGSGEGWVSALNEEPEKIIGWS 452
Score = 145 bits (311), Expect(2) = 1e-045
Identities = 64/108 (59%), Positives = 78/108 (72%)
Frame = +3 / +3
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYLSEHSESFFWHPSHQYPDPKASVTFLLQVVQ 869
QPMIFS SL+ +TQ SP+ SES T+MYL HS SFFWHPSHQ P P+A+VTFLL+V+
Sbjct: 456 QPMIFSGSSLSAETQPSPLPSESFTTIMYLKLHSASFFWHPSHQ*PRPRAAVTFLLRVLH 635
Query: 870 ARYHIF*SGLMWLMMAYRLKKTGFSWPIAGSLVM*DRKTLSEYMDLKP 1013
A YHI +G+M L+ A LK G S P G LV+*DR T SE++DL P
Sbjct: 636 AGYHIVWTGVMKLIYALMLKNAGLSSPKEGLLVI*DRDTRSEHIDLAP 779
Score = 92.7 bits (196), Expect(2) = 2e-068
Identities = 36/71 (50%), Positives = 55/71 (77%)
Frame = -1 / -3
Query: 685 ADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAE 506
+DEL ++ + +++Y ++KEATW PHL R+ V+ +EY +EKRQR+TVR APVD A E
Sbjct: 450 SDELGLLKSQIEENAYQQRVKEATWNPHLLRIRVSHNEYNHEKRQRMTVRAVAPVDSAPE 271
Query: 505 SKYLLEEIAKL 473
S++LLEE++K+
Sbjct: 270 SRFLLEELSKM 238
Score = 82.6 bits (174), Expect(2) = 1e-022
Identities = 41/102 (40%), Positives = 57/102 (55%)
Frame = +2 / +2
Query: 695 NDLLRMLVEHGHPSLTSGIGELDHHDVSQRALRVILLAPLAPVSRPKSFSHLLVTGRAST 874
NDL R +E G+P+ T+ I + H +V AL +ILLA AP++ P+S SH L+ A
Sbjct: 461 NDLFRFFIECGNPTFTTPIRKFYHDNVP*AALCIILLASFAPIATPQSSSHFLIACLARR 640
Query: 875 VPHILIRLDVAYDGIQTEENRLFLAHSRITGDVRQKNSIRIH 1000
+PH L R D AY E+ RL L + +R + SIR H
Sbjct: 641 IPHCLDRCDEAYICSNAEKCRLVLPQGGVACYMR*RYSIRAH 766
Score = 59.7 bits (124), Expect(2) = 1e-045
Identities = 30/45 (66%), Positives = 33/45 (73%)
Frame = +3 / +2
Query: 486 SSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR*GTQVA 620
SSSK LDS A+STGA+ LTVILCLFS +YS T R*G QVA
Sbjct: 251 SSSKNLDSGAESTGATALTVILCLFS*LYSLWETRILKR*GFQVA 385
Score = 45.1 bits (92), Expect(2) = 1e-022
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = +2 / +1
Query: 458 LLASGELRDLFKQVLGLSCEVDRCFTPHGDSLPLLVHVFMLCDADAEQVRNPGGFLELEN 637
+L + L LFKQ GL ++ +P+ LPLLV V ++ D D++++R P GF +
Sbjct: 223 VLRAFHLGKLFKQKSGLRSRINWSNSPNCHPLPLLVIVLVVGDTDSQKMRIPSGFFDSLL 402
Query: 638 VAVV 649
V V+
Sbjct: 403 VGVL 414
>gb|CA929222.1|CA929222 MTU2CA.P10.G01 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 549
Score = 237 bits (511), Expect = 2e-061
Identities = 92/164 (56%), Positives = 129/164 (78%)
Frame = -1 / -2
Query: 1492 IVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPK 1313
+ E ++ +P ++ V IDQLGPYV ++LVD++G+VQSVSPT S+RRK +NET+PK
Sbjct: 494 VEEASDETACIPETKFKFVPIDQLGPYVNSKDLVDVIGIVQSVSPTTSIRRKSNNETVPK 315
Query: 1312 RDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRS 1133
RDIVVAD++ KTV +SLWN+LAT+ GQEL D+ D SPVVAIKSLKV DFQG+SLST+G+S
Sbjct: 314 RDIVVADETKKTVVVSLWNELATSVGQELQDIADKSPVVAIKSLKVGDFQGISLSTLGKS 135
Query: 1132 TLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKS 1001
+++NP + E++ L+SWYDSEGK+TS+A + + + + G +S
Sbjct: 134 IVQVNPVIAESEKLRSWYDSEGKETSMASVGSGLSPSTKSGARS 3
Score = 116 bits (248), Expect(2) = 2e-029
Identities = 59/105 (56%), Positives = 71/105 (67%)
Frame = +3 / +1
Query: 1050 ASEVSLPSESYQDLRFLASGKSGLISRVLLPIVERDTPWKSDTFRLFIATTGELSTMSKS 1229
A EVSLPSESYQ L F S +GL +LLP V++D P KS T R IATTG+LS +S +
Sbjct: 52 AIEVSLPSESYQLLSFSDSAITGLTCTMLLPRVDKDIP*KSPTLRDLIATTGDLSAISCN 231
Query: 1230 SWPVVVARSFQREIVTVLPESSATTMSRFGIVSLSIFLLTLSVGD 1364
S P +VA SF + TV SSATT+SRFG VSL +FL L VG+
Sbjct: 232 SCPTLVASSFHNDTTTVFFVSSATTISRFGTVSLLLFLRILVVGE 366
Score = 33.6 bits (67), Expect(2) = 2e-029
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +3 / +1
Query: 1452 TGGRKVSPSASSTIAFSFSDNS*SFLTVLNC 1544
+G + VS ASST FSF S*SF T LNC
Sbjct: 457 SGIQAVSSLASSTSEFSFKVIS*SFCTGLNC 549
>gb|CA929904.1|CA929904 MTU2CA.P4.C05 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 640
Score = 236 bits (509), Expect = 4e-061
Identities = 92/164 (56%), Positives = 128/164 (78%)
Frame = -1 / -3
Query: 1492 IVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPK 1313
+ E + +P ++ V IDQLGPYV ++LVD++G+VQSVSPT S+RRK +NET+PK
Sbjct: 494 VEEARDEAACIPETKFKFVPIDQLGPYVNSKDLVDVIGIVQSVSPTTSIRRKSNNETVPK 315
Query: 1312 RDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRS 1133
RDIVVAD++ KTV +SLWN+LAT+ GQEL D+ D SPVVAIKSLKV DFQG+SLST+G+S
Sbjct: 314 RDIVVADETKKTVVVSLWNELATSVGQELQDIADKSPVVAIKSLKVGDFQGISLSTLGKS 135
Query: 1132 TLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKS 1001
+++NP + E++ L+SWYDSEGK+TS+A + + + + G +S
Sbjct: 134 IVQVNPVIAESEKLRSWYDSEGKETSMASVGSGLSPSTKSGARS 3
Score = 116 bits (248), Expect(2) = 3e-033
Identities = 59/105 (56%), Positives = 71/105 (67%)
Frame = +3 / +1
Query: 1050 ASEVSLPSESYQDLRFLASGKSGLISRVLLPIVERDTPWKSDTFRLFIATTGELSTMSKS 1229
A EVSLPSESYQ L F S +GL +LLP V++D P KS T R IATTG+LS +S +
Sbjct: 52 AIEVSLPSESYQLLSFSDSAITGLTCTMLLPRVDKDIP*KSPTLRDLIATTGDLSAISCN 231
Query: 1230 SWPVVVARSFQREIVTVLPESSATTMSRFGIVSLSIFLLTLSVGD 1364
S P +VA SF + TV SSATT+SRFG VSL +FL L VG+
Sbjct: 232 SCPTLVASSFHNDTTTVFFVSSATTISRFGTVSLLLFLRILVVGE 366
Score = 92.7 bits (196), Expect(2) = 1e-021
Identities = 46/130 (35%), Positives = 75/130 (57%)
Frame = +2 / +3
Query: 1055 *SIFAFRVIPGLKILSLRQVRINLESTSANS*KRHALEVRYF*ALYRNNRRTVNHVQKLL 1234
*S+F FR+IP ++L ++L A +R+ L++ F N RR ++++ + L
Sbjct: 57 *SLFTFRIIPASQLL*FSNNWVDLHYALAQGGQRYTLKISNFKGFDSNYRRFISNILQFL 236
Query: 1235 ASRSSKIIPERNSNSFARVICYNNVTLRYCLVVNLSPNTECGRYALNHTNNIYKLPATDV 1414
+ K+IP+ + NS R+I YNN+TL L+V L +T C LN++NNI K+ D+
Sbjct: 237 SHTCCKLIPQ*HHNSLLRLISYNNITLWNSLIVALPSDTRCR*NTLNNSNNINKIF*IDI 416
Query: 1415 WS*LINLDKV 1444
+ LIN DK+
Sbjct: 417 GTQLINWDKL 446
Score = 46.9 bits (96), Expect(2) = 3e-033
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +3 / +1
Query: 1452 TGGRKVSPSASSTIAFSFSDNS*SFLTVLNCLLAILRDPFE 1574
+G + S ASST FSF S*SF TVLNCLLA L PF+
Sbjct: 457 SGIQAASSLASSTSEFSFKVIS*SFCTVLNCLLATLSVPFD 579
Score = 31.3 bits (62), Expect(2) = 1e-021
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / +3
Query: 1484 FNNSILV**QLIVIFDCLELLVGNSKRSF* 1573
F+ +L+ LI+I CL+LLV N +R F*
Sbjct: 489 FHFRVLIQGHLIIILHCLKLLVSNPERPF* 578
>gb|CA924888.1|CA924888 MTU7TL.P11.A05 Aspen leaf cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 613
Score = 233 bits (504), Expect = 2e-060
Identities = 91/164 (55%), Positives = 127/164 (77%)
Frame = -1 / -3
Query: 1492 IVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPK 1313
+ E + +P ++ V IDQLGPYV ++LVD++G+VQSVSPT S+RRK +NET+PK
Sbjct: 494 VEEARDEAACIPETKFKXVPIDQLGPYVNSKDLVDVIGIVQSVSPTTSIRRKSNNETVPK 315
Query: 1312 RDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRS 1133
RDIVVAD++ KTV +SLWN+LAT+ GQEL D+ D SPVV IKSLKV DFQG+SLST+G+S
Sbjct: 314 RDIVVADETKKTVVVSLWNELATSVGQELQDIADKSPVVTIKSLKVGDFQGISLSTLGKS 135
Query: 1132 TLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKS 1001
+++NP + E++ L+SWYDSEGK+TS+A + + + + G +S
Sbjct: 134 IVQVNPVIAESEKLRSWYDSEGKETSMASVGSGLSPSTKSGARS 3
Score = 116 bits (248), Expect(2) = 1e-031
Identities = 59/105 (56%), Positives = 70/105 (66%)
Frame = +3 / +1
Query: 1050 ASEVSLPSESYQDLRFLASGKSGLISRVLLPIVERDTPWKSDTFRLFIATTGELSTMSKS 1229
A EVSLPSESYQ L F S +GL +LLP V++D P KS T R I TTG+LS +S +
Sbjct: 52 AIEVSLPSESYQLLSFSDSAITGLTCTMLLPRVDKDIP*KSPTLRDLIVTTGDLSAISCN 231
Query: 1230 SWPVVVARSFQREIVTVLPESSATTMSRFGIVSLSIFLLTLSVGD 1364
S P +VA SF + TV SSATTMSRFG VSL +FL L VG+
Sbjct: 232 SCPTLVASSFHNDTTTVFFVSSATTMSRFGTVSLLLFLRILVVGE 366
Score = 41.4 bits (84), Expect(2) = 1e-031
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +3 / +1
Query: 1452 TGGRKVSPSASSTIAFSFSDNS*SFLTVLNCLLAILRDPFE 1574
+G + S ASST FSF S*SF VLNCL + L PF+
Sbjct: 457 SGIQAASSLASSTSEFSFKVIS*SFCAVLNCLFSTLSVPFD 579
>gb|CA929212.1|CA929212 MTU2CA.P10.E10 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 625
Score = 232 bits (501), Expect = 5e-060
Identities = 91/164 (55%), Positives = 127/164 (77%)
Frame = -1 / -3
Query: 1492 IVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPK 1313
+ E + +P ++ V IDQLGPYV ++LVD++ +VQSVSPT S+RRK +NET+PK
Sbjct: 494 VEEARDEAACIPETKFKFVPIDQLGPYVNSKDLVDVIRIVQSVSPTTSIRRKSNNETVPK 315
Query: 1312 RDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRS 1133
RDIVVAD++ KTV +SLWN+LAT+ GQEL D+ D SPVVAIKSLKV DFQG+SLST+G+S
Sbjct: 314 RDIVVADETKKTVVVSLWNELATSVGQELQDIADKSPVVAIKSLKVGDFQGISLSTLGKS 135
Query: 1132 TLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKS 1001
+++NP + E++ L+SWYDSEGK+TS+A + + + + G +S
Sbjct: 134 IVQVNPVIAESEKLRSWYDSEGKETSMASVGSGLSPSTKSGARS 3
Score = 116 bits (248), Expect(2) = 3e-033
Identities = 59/105 (56%), Positives = 71/105 (67%)
Frame = +3 / +1
Query: 1050 ASEVSLPSESYQDLRFLASGKSGLISRVLLPIVERDTPWKSDTFRLFIATTGELSTMSKS 1229
A EVSLPSESYQ L F S +GL +LLP V++D P KS T R IATTG+LS +S +
Sbjct: 52 AIEVSLPSESYQLLSFSDSAITGLTCTMLLPRVDKDIP*KSPTLRDLIATTGDLSAISCN 231
Query: 1230 SWPVVVARSFQREIVTVLPESSATTMSRFGIVSLSIFLLTLSVGD 1364
S P +VA SF + TV SSATT+SRFG VSL +FL L VG+
Sbjct: 232 SCPTLVASSFHNDTTTVFFVSSATTISRFGTVSLLLFLRILVVGE 366
Score = 92.7 bits (196), Expect(2) = 5e-021
Identities = 46/130 (35%), Positives = 75/130 (57%)
Frame = +2 / +3
Query: 1055 *SIFAFRVIPGLKILSLRQVRINLESTSANS*KRHALEVRYF*ALYRNNRRTVNHVQKLL 1234
*S+F FR+IP ++L ++L A +R+ L++ F N RR ++++ + L
Sbjct: 57 *SLFTFRIIPASQLL*FSNNWVDLHYALAQGGQRYTLKISNFKGFDSNYRRFISNILQFL 236
Query: 1235 ASRSSKIIPERNSNSFARVICYNNVTLRYCLVVNLSPNTECGRYALNHTNNIYKLPATDV 1414
+ K+IP+ + NS R+I YNN+TL L+V L +T C LN++NNI K+ D+
Sbjct: 237 SHTCCKLIPQ*HHNSLLRLISYNNITLWNSLIVALPSDTRCR*NTLNNSNNINKIF*IDI 416
Query: 1415 WS*LINLDKV 1444
+ LIN DK+
Sbjct: 417 GTQLINWDKL 446
Score = 46.9 bits (96), Expect(2) = 3e-033
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +3 / +1
Query: 1452 TGGRKVSPSASSTIAFSFSDNS*SFLTVLNCLLAILRDPFE 1574
+G + S ASST FSF S*SF TVLNCLLA L PF+
Sbjct: 457 SGIQAASSLASSTSEFSFKVIS*SFCTVLNCLLATLSVPFD 579
Score = 29.5 bits (58), Expect(2) = 5e-021
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2 / +3
Query: 1484 FNNSILV**QLIVIFDCLELLVGNSKRSF* 1573
F+ + + LI+I CL+LLV N +R F*
Sbjct: 489 FHFRVFIQGHLIIILHCLKLLVSNPERPF* 578
>gb|CA930094.1|CA930094 MTU2CA.P7.A04 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 685
Score = 232 bits (500), Expect = 7e-060
Identities = 89/152 (58%), Positives = 124/152 (81%)
Frame = -1 / +3
Query: 1492 IVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPK 1313
+ E ++ +P ++ V IDQLGPYV ++LVD++G+VQSVSPT S+RRK +NET+P+
Sbjct: 225 VEEASDETACIPETKFKFVPIDQLGPYVNSKDLVDVIGIVQSVSPTTSIRRKSNNETVPE 404
Query: 1312 RDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRS 1133
RDIVVAD++ KTV +SLWN+LAT+ GQEL D+ D SPVVAIKSLKV DFQG+SLST+G+S
Sbjct: 405 RDIVVADETKKTVVVSLWNELATSVGQELQDIADKSPVVAIKSLKVGDFQGISLSTLGKS 584
Query: 1132 TLEINPDLPEAKNLKSWYDSEGKDTSLAPISA 1037
+++NP + E++ L+SWYDSEGK+TS+A + +
Sbjct: 585 IVQVNPVIAESEKLRSWYDSEGKETSMASVDS 680
Score = 112 bits (240), Expect(2) = 1e-032
Identities = 58/105 (55%), Positives = 70/105 (66%)
Frame = +3 / -1
Query: 1050 ASEVSLPSESYQDLRFLASGKSGLISRVLLPIVERDTPWKSDTFRLFIATTGELSTMSKS 1229
A EVSLPSESYQ L F S +GL +LLP V++D P KS T R IATTG+LS +S +
Sbjct: 667 AIEVSLPSESYQLLSFSDSAITGLTCTMLLPRVDKDIP*KSPTLRDLIATTGDLSAISCN 488
Query: 1230 SWPVVVARSFQREIVTVLPESSATTMSRFGIVSLSIFLLTLSVGD 1364
S P +VA SF + TV SSATT+SR G VSL +FL L VG+
Sbjct: 487 SCPTLVASSFHNDTTTVFFVSSATTISRSGTVSLLLFLRILVVGE 353
Score = 95.5 bits (202), Expect(2) = 1e-021
Identities = 47/130 (36%), Positives = 76/130 (58%)
Frame = +2 / -3
Query: 1055 *SIFAFRVIPGLKILSLRQVRINLESTSANS*KRHALEVRYF*ALYRNNRRTVNHVQKLL 1234
*S+F FR+IP ++L ++L A +R+ L++ F RN RR ++++ + L
Sbjct: 662 *SLFTFRIIPASQLL*FSNNWVDLHYALAQGGQRYTLKISNFKGFDRNYRRFISNILQFL 483
Query: 1235 ASRSSKIIPERNSNSFARVICYNNVTLRYCLVVNLSPNTECGRYALNHTNNIYKLPATDV 1414
+ K+IP+ + NS R+I YNN+TL L+V L +T C LN++NNI K+ D+
Sbjct: 482 SHTCCKLIPQ*HHNSLLRLISYNNITLWNSLIVALPSDTRCR*NTLNNSNNINKIF*IDI 303
Query: 1415 WS*LINLDKV 1444
+ LIN DK+
Sbjct: 302 GTQLINWDKL 273
Score = 48.7 bits (100), Expect(2) = 1e-032
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +3 / -1
Query: 1452 TGGRKVSPSASSTIAFSFSDNS*SFLTVLNCLLAILRDPFE 1574
+G + VS ASST FSF S*SF TVLNCLLA L PF+
Sbjct: 262 SGIQAVSSLASSTSEFSFKVIS*SFCTVLNCLLATLSVPFD 140
Score = 29.0 bits (57), Expect(2) = 1e-021
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2 / -3
Query: 1484 FNNSILV**QLIVIFDCLELLVGNSKRSF 1570
F+ + + LI+I CL+LLV N +R F
Sbjct: 230 FHFRVFIQGHLIIILHCLKLLVSNPERPF 144
>gb|CA929539.1|CA929539 MTU2CA.P15.C04 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 679
Score = 230 bits (497), Expect = 2e-059
Identities = 89/150 (59%), Positives = 122/150 (81%)
Frame = -1 / +3
Query: 1492 IVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPK 1313
+ E ++ +P ++ V IDQLGPYV ++LVD++G+VQSVSPT S+RRK +NET+PK
Sbjct: 225 VEEASDETACIPETKFKFVPIDQLGPYVNSKDLVDVIGIVQSVSPTTSIRRKSNNETVPK 404
Query: 1312 RDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRS 1133
RDIVVAD++ KTV +SLWN+LAT+ GQEL D+ D SPVVAIKSLKV DFQG+SLST+G+S
Sbjct: 405 RDIVVADETKKTVVVSLWNELATSVGQELQDIADKSPVVAIKSLKVGDFQGISLSTLGKS 584
Query: 1132 TLEINPDLPEAKNLKSWYDSEGKDTSLAPI 1043
+++NP + E++ L+SWYDSEG +TS+A +
Sbjct: 585 IVQVNPVIAESEKLRSWYDSEGXETSMASV 674
Score = 114 bits (243), Expect(2) = 4e-033
Identities = 58/105 (55%), Positives = 70/105 (66%)
Frame = +3 / -1
Query: 1050 ASEVSLPSESYQDLRFLASGKSGLISRVLLPIVERDTPWKSDTFRLFIATTGELSTMSKS 1229
A EVS PSESYQ L F S +GL +LLP V++D P KS T R IATTG+LS +S +
Sbjct: 667 AIEVSXPSESYQLLSFSDSAITGLTCTMLLPRVDKDIP*KSPTLRDLIATTGDLSAISCN 488
Query: 1230 SWPVVVARSFQREIVTVLPESSATTMSRFGIVSLSIFLLTLSVGD 1364
S P +VA SF + TV SSATT+SRFG VSL +FL L VG+
Sbjct: 487 SCPTLVASSFHNDTTTVFFVSSATTISRFGTVSLLLFLRILVVGE 353
Score = 92.3 bits (195), Expect(2) = 9e-021
Identities = 46/130 (35%), Positives = 75/130 (57%)
Frame = +2 / -3
Query: 1055 *SIFAFRVIPGLKILSLRQVRINLESTSANS*KRHALEVRYF*ALYRNNRRTVNHVQKLL 1234
*S+ FR+IP ++L ++L A +R+ L++ F RN RR ++++ + L
Sbjct: 662 *SLXTFRIIPASQLL*FSNNWVDLHYALAQGGQRYTLKISNFKGFDRNYRRFISNILQFL 483
Query: 1235 ASRSSKIIPERNSNSFARVICYNNVTLRYCLVVNLSPNTECGRYALNHTNNIYKLPATDV 1414
+ K+IP+ + NS R+I YNN+TL L+V L +T C LN++NNI K+ D+
Sbjct: 482 SHTCCKLIPQ*HHNSLLRLISYNNITLWNSLIVALPSDTRCR*NTLNNSNNINKIF*IDI 303
Query: 1415 WS*LINLDKV 1444
+ LIN DK+
Sbjct: 302 GTQLINWDKL 273
Score = 48.7 bits (100), Expect(2) = 4e-033
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +3 / -1
Query: 1452 TGGRKVSPSASSTIAFSFSDNS*SFLTVLNCLLAILRDPFE 1574
+G + VS ASST FSF S*SF TVLNCLLA L PF+
Sbjct: 262 SGIQAVSSLASSTSEFSFKVIS*SFCTVLNCLLATLSVPFD 140
Score = 29.0 bits (57), Expect(2) = 9e-021
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2 / -3
Query: 1484 FNNSILV**QLIVIFDCLELLVGNSKRSF 1570
F+ + + LI+I CL+LLV N +R F
Sbjct: 230 FHFRVFIQGHLIIILHCLKLLVSNPERPF 144
>gb|BU836407.1|BU836407 T086B12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 351
Score = 218 bits (471), Expect = 7e-056
Identities = 83/114 (72%), Positives = 97/114 (85%)
Frame = -1 / +2
Query: 1012 GFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAF 833
G ++MYSDRV LSHITS+P++G++KP FFS+ A IS IKPDQ MWYRAC TCNKKVT+A
Sbjct: 2 GARAMYSDRVSLSHITSNPSLGEDKPTFFSIRAYISFIKPDQTMWYRACKTCNKKVTDAL 181
Query: 832 GSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELD 671
G GYWCE C KND+ECSL+YIMV+K+SD +GE WVS FNE AEKII CSADELD
Sbjct: 182 GGGYWCERCPKNDAECSLKYIMVVKVSDASGEGWVSAFNEEAEKIICCSADELD 343
Score = 151 bits (324), Expect = 1e-035
Identities = 70/108 (64%), Positives = 76/108 (70%)
Frame = +3 / -1
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYLSEHSESFFWHPSHQYPDPKASVTFLLQVVQ 869
Q MIFSA SLN +TQ SP+ SE+ T+MY HS SFF H SHQYP P+ASVTFLL V+Q
Sbjct: 324 QQMIFSASSLNAETQPSPLASETFTTIMYFKLHSASFFGHLSHQYPPPRASVTFLLHVLQ 145
Query: 870 ARYHIF*SGLMWLMMAYRLKKTGFSWPIAGSLVM*DRKTLSEYMDLKP 1013
ARYHI SGLM LM A LK G S P G LVM*DR T SEYM L P
Sbjct: 144 ARYHIVWSGLMKLMYALMLKNVGLSSPKDGLLVM*DRDTRSEYMALAP 1
>gb|CA930208.1|CA930208 MTU2CA.P8.E12 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 652
Score = 218 bits (471), Expect = 7e-056
Identities = 85/142 (59%), Positives = 114/142 (80%)
Frame = -1 / +3
Query: 1492 IVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPK 1313
+ E + +P ++ V IDQLGPYV ++LVD++G+VQSVSPT S+RRK +NET+PK
Sbjct: 225 VEEARDEAACIPETKFKFVPIDQLGPYVNSKDLVDVIGIVQSVSPTTSIRRKSNNETVPK 404
Query: 1312 RDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRS 1133
RDIVVAD++ KTV +SLWN+LAT+ GQEL D+ D SPVVAI SLKV DFQG+SLST+G+S
Sbjct: 405 RDIVVADETKKTVVVSLWNELATSVGQELQDIADKSPVVAIXSLKVGDFQGISLSTLGKS 584
Query: 1132 TLEINPDLPEAKNLKSWYDSEG 1067
+++NP + E++ L+SWYDSEG
Sbjct: 585 IVQVNPVIAESEKLRSWYDSEG 650
Score = 109 bits (232), Expect(2) = 2e-030
Identities = 55/100 (55%), Positives = 67/100 (67%)
Frame = +3 / -1
Query: 1065 LPSESYQDLRFLASGKSGLISRVLLPIVERDTPWKSDTFRLFIATTGELSTMSKSSWPVV 1244
LPSESYQ L F S +GL +LLP V++D P KS T R IATTG+LS +S +S P +
Sbjct: 652 LPSESYQLLSFSDSAITGLTCTMLLPRVDKDIP*KSPTLRDXIATTGDLSAISCNSCPTL 473
Query: 1245 VARSFQREIVTVLPESSATTMSRFGIVSLSIFLLTLSVGD 1364
VA SF + TV SSATT+SRFG VSL +FL L VG+
Sbjct: 472 VASSFHNDTTTVFFVSSATTISRFGTVSLLLFLRILVVGE 353
Score = 44.6 bits (91), Expect(2) = 2e-030
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3 / -1
Query: 1452 TGGRKVSPSASSTIAFSFSDNS*SFLTVLNCLLAILRDPFE 1574
+G + S ASST FSF S*SF TVL+CLLA L PF+
Sbjct: 262 SGIQAASSLASSTSEFSFKVIS*SFCTVLSCLLATLSVPFD 140
>gb|CV235788.1|CV235788 WS01221.B21_J06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01221_J06 3', mRNA sequence
Length = 617
Score = 206 bits (445), Expect = 3e-052
Identities = 81/116 (69%), Positives = 100/116 (86%)
Frame = -1 / -2
Query: 820 WCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDS 641
WCEGCQKND+ECSLRYIMV+K+SD +GE WVS FNE AEKIIGCSADELD ++ + +++
Sbjct: 616 WCEGCQKNDAECSLRYIMVVKVSDGSGEGWVSAFNEKAEKIIGCSADELDLLKSQIEENT 437
Query: 640 YVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKL 473
+LKEATW PHL R+SV+Q+EY NEKRQR+TVR APVDFAAES++LLEEI+K+
Sbjct: 436 SQQRLKEATWNPHLLRISVSQNEYNNEKRQRMTVRAVAPVDFAAESRFLLEEISKM 269
Score = 79.0 bits (166), Expect(2) = 1e-029
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +3 / +3
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYLSEHSESFFWHPSHQ 821
QPMIFSA SLN +TQ SP+ SE+ T+MYL HS SFFWHPSHQ
Sbjct: 486 QPMIFSAFSLNAETQPSPLPSETFTTIMYLKLHSASFFWHPSHQ 617
Score = 72.5 bits (152), Expect(2) = 1e-029
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +3 / +3
Query: 459 F*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR*GTQVA 620
+*+ F ISSSK LDSAAKSTGA+ LTVILCLFS +YS TL R*G QVA
Sbjct: 255 Y*EPFIFEISSSKNLDSAAKSTGATALTVILCLFSLLYSFWETLILKR*GFQVA 416
>gb|DT469656.1|DT469656 WS01918.C21_H17 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01918_H17 3', mRNA sequence
Length = 552
Score = 202 bits (435), Expect = 6e-051
Identities = 80/114 (70%), Positives = 99/114 (86%)
Frame = -1 / -1
Query: 814 EGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYV 635
EGCQKND+ECSLRYIMV+K+SD +GE WVS FNE AEKIIGCSADELD ++ + +++Y
Sbjct: 549 EGCQKNDAECSLRYIMVVKVSDGSGEGWVSAFNEEAEKIIGCSADELDLLKSQIEENTYQ 370
Query: 634 LKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKL 473
+LKEATW PHL R+SV+Q+EY NEKRQR+TVR APVDFAAES++LLEEI+K+
Sbjct: 369 QRLKEATWNPHLLRISVSQNEYNNEKRQRMTVRAVAPVDFAAESRFLLEEISKM 208
Score = 73.5 bits (154), Expect(2) = 4e-028
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = +3 / +2
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYLSEHSESFFWHPS 815
QPMIFSA SLN +TQ SP+ SE+ T+MYL HS SFFWHPS
Sbjct: 425 QPMIFSASSLNAETQPSPLPSETFTTIMYLKLHSASFFWHPS 550
Score = 72.5 bits (152), Expect(2) = 4e-028
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +3 / +2
Query: 459 F*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR*GTQVA 620
+*+ F ISSSK LDSAAKSTGA+ LTVILCLFS +YS TL R*G QVA
Sbjct: 194 Y*EPFIFEISSSKNLDSAAKSTGATALTVILCLFSLLYSFWETLILKR*GFQVA 355
>gb|DT496637.1|DT496637 WS01123.BR_P16 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_P16 5', mRNA sequence
Length = 605
Score = 199 bits (430), Expect = 3e-050
Identities = 79/113 (69%), Positives = 98/113 (86%)
Frame = -1 / +2
Query: 811 GCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVL 632
GCQKND+ECSLRYIMV+K+SD +GE WVS FNE AEKIIGCSADELD ++ + +++Y
Sbjct: 2 GCQKNDAECSLRYIMVVKVSDGSGEGWVSAFNEEAEKIIGCSADELDLLKSQIEENTYQQ 181
Query: 631 KLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKL 473
+LKEATW PHL R+SV+Q+EY NEKRQR+TVR APVDFAAES++LLEEI+K+
Sbjct: 182 RLKEATWNPHLLRISVSQNEYNNEKRQRMTVRAVAPVDFAAESRFLLEEISKM 340
Score = 72.5 bits (152), Expect(2) = 1e-027
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +3 / -3
Query: 459 F*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR*GTQVA 620
+*+ F ISSSK LDSAAKSTGA+ LTVILCLFS +YS TL R*G QVA
Sbjct: 354 Y*EPFIFEISSSKNLDSAAKSTGATALTVILCLFSLLYSFWETLILKR*GFQVA 193
Score = 71.6 bits (150), Expect(2) = 1e-027
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = +3 / -3
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYLSEHSESFFWHP 812
QPMIFSA SLN +TQ SP+ SE+ T+MYL HS SFFWHP
Sbjct: 123 QPMIFSASSLNAETQPSPLPSETFTTIMYLKLHSASFFWHP 1
>gb|CV249391.1|CV249391 WS01123.B21_P16 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_P16 3', mRNA sequence
Length = 593
Score = 188 bits (405), Expect = 8e-047
Identities = 75/109 (68%), Positives = 94/109 (86%)
Frame = -1 / -2
Query: 799 NDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKE 620
ND+ECSLRYIMV+K+SD +GE WVS FNE AEKIIGCSADELD ++ + +++Y +LKE
Sbjct: 592 NDAECSLRYIMVVKVSDGSGEGWVSAFNEEAEKIIGCSADELDLLKSQIEENTYQQRLKE 413
Query: 619 ATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKL 473
ATW PHL R+SV+Q+EY NEKRQR+TVR APVDFAAES++LLEEI+K+
Sbjct: 412 ATWNPHLLRISVSQNEYNNEKRQRMTVRAVAPVDFAAESRFLLEEISKM 266
Score = 72.5 bits (152), Expect(2) = 3e-023
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +3 / +3
Query: 459 F*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR*GTQVA 620
+*+ F ISSSK LDSAAKSTGA+ LTVILCLFS +YS TL R*G QVA
Sbjct: 252 Y*EPFIFEISSSKNLDSAAKSTGATALTVILCLFSLLYSFWETLILKR*GFQVA 413
Score = 57.0 bits (118), Expect(2) = 3e-023
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +3 / +3
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYLSEHSESF 800
QPMIFSA SLN +TQ SP+ SE+ T+MYL HS SF
Sbjct: 483 QPMIFSASSLNAETQPSPLPSETFTTIMYLKLHSASF 593
>gb|CA929851.1|CA929851 MTU2CA.P3.F04 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 581
Score = 187 bits (403), Expect = 2e-046
Identities = 74/117 (63%), Positives = 95/117 (81%)
Frame = -1 / +3
Query: 1486 EEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRD 1307
E ++ +P ++ V IDQLGPYV ++LVD++G+VQSVSPT S+RRK DNET+PKRD
Sbjct: 231 EASDETACIPETKFKFVPIDQLGPYVNSKDLVDVIGIVQSVSPTTSIRRKSDNETVPKRD 410
Query: 1306 IVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGR 1136
I VAD++ KTV +SLWN+LAT+ GQEL D+ D SPVVAIKSLKV DFQG+SLST+G+
Sbjct: 411 IAVADETKKTVVVSLWNELATSVGQELQDIADKSPVVAIKSLKVGDFQGISLSTLGK 581
Score = 86.8 bits (183), Expect(2) = 3e-024
Identities = 42/76 (55%), Positives = 52/76 (68%)
Frame = +3 / -2
Query: 1137 LPIVERDTPWKSDTFRLFIATTGELSTMSKSSWPVVVARSFQREIVTVLPESSATTMSRF 1316
LP V++D P KS T R IATTG+LS +S +S P +VA SF + TV SSAT +SRF
Sbjct: 580 LPRVDKDIP*KSPTLRDLIATTGDLSAISCNSCPTLVASSFHNDTTTVFFVSSATAISRF 401
Query: 1317 GIVSLSIFLLTLSVGD 1364
G VSLS+FL L VG+
Sbjct: 400 GTVSLSLFLRILVVGE 353
Score = 46.4 bits (95), Expect(2) = 3e-024
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +3 / -2
Query: 1452 TGGRKVSPSASSTIAFSFSDNS*SFLTVLNCLLAILRDPFE 1574
+G + VS ASS FSF S*SF TVLNCLLA L PF+
Sbjct: 262 SGIQAVSSLASSNSEFSFKVIS*SFCTVLNCLLATLSVPFD 140
>gb|BU834047.1|BU834047 T056A04 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 285
Score = 68.4 bits (143), Expect(3) = 2e-027
Identities = 26/42 (61%), Positives = 34/42 (80%)
Frame = -1 / +1
Query: 649 DDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAP 524
+++Y +LKEATW PHL R+ V+Q+EY NEKRQR+TVR AP
Sbjct: 121 ENTYQQRLKEATWNPHLLRIGVSQNEYNNEKRQRMTVRAVAP 246
Score = 63.4 bits (132), Expect(3) = 2e-027
Identities = 24/42 (57%), Positives = 33/42 (78%)
Frame = -1 / +1
Query: 766 VIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDS 641
V+K+S +GE WVS FNE AEKII CSADELD ++ + G+++
Sbjct: 1 VVKVSGASGEGWVSAFNEEAEKIICCSADELDLLKSQIGEEN 126
Score = 29.5 bits (58), Expect(3) = 2e-027
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -1 / +2
Query: 526 PVDFAAESKYLLE 488
PVDFAAES++LLE
Sbjct: 245 PVDFAAESRFLLE 283
>gb|DN499770.1|DN499770 T085D07.5pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T085D07 5', mRNA sequence
Length = 824
Score = 73.5 bits (154), Expect(2) = 6e-026
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = -1 / +2
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
C+KKVT + CE C ++ EC RYI+ +++ D TG WV+ F E E+I+G SA
Sbjct: 446 CSKKVTNNGDGKWRCEKCDQSVDECDYRYILQLQIQDHTGITWVTAFQECGEEIMGISAK 625
Query: 679 ELDRIRKEEGDD 644
++ ++ E+ DD
Sbjct: 626 DMHYLKHEQQDD 661
Score = 68.9 bits (144), Expect(2) = 6e-026
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = -1 / +2
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+A+KS ++S+F G ++ TI S L I PD PEA LK W+D EG++T IS E
Sbjct: 104 PVLAVKSGRISEFSGKAVGTISTSQLFIEPDSPEANRLKEWFDREGRNTPSLSISRE 274
>gb|BU836337.1|BU836337 T085D07 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 664
Score = 73.0 bits (153), Expect(2) = 7e-026
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = -1 / +3
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
C+KKVT + CE C ++ EC RYI+ +++ D TG WV+ F E E+I+G SA
Sbjct: 447 CSKKVTNNGDGKWRCEKCDQSVDECDYRYILQLQIQDHTGITWVTAFXECGEEIMGISAK 626
Query: 679 ELDRIRKEEGDD 644
++ ++ E+ DD
Sbjct: 627 DMHYLKHEQQDD 662
Score = 68.9 bits (144), Expect(2) = 7e-026
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = -1 / +3
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+A+KS ++S+F G ++ TI S L I PD PEA LK W+D EG++T IS E
Sbjct: 105 PVLAVKSGRISEFSGKAVGTISTSQLFIEPDSPEANRLKEWFDREGRNTPSLSISRE 275
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 774,975,459
Number of Sequences: 369679
Number of extensions: 11448762
Number of successful extensions: 52970
Number of sequences better than 1.0e-020: 26
length of database: 67,802,888
effective HSP length: 54
effective length of database: 47,840,222
effective search space used: 22915466338
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)