TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2418946.2.1
(690 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN550311.1|CN550311 GQ0243.B3_G13 GQ024 Populus trichoca... 221 4e-057
gb|DN493079.1|DN493079 X055G01.3pR Populus wood cDNA librar... 220 1e-056
gb|DN503094.1|DN503094 X055G01.5pR Populus wood cDNA librar... 220 1e-056
gb|CV232074.1|CV232074 WS0196.B21_H14 PT-DX-N-A-10 Populus ... 219 2e-056
gb|CV246263.1|CV246263 WS0111.B21_N04 PT-P-FL-A-2 Populus t... 219 2e-056
gb|CV248266.1|CV248266 WS01120.B21_A19 PT-P-FL-A-2 Populus ... 219 2e-056
gb|CV249853.1|CV249853 WS01125.B21_I08 PT-P-FL-A-2 Populus ... 219 2e-056
gb|CV256705.1|CV256705 WS0244.B21_J09 PTxD-ICC-N-A-14 Popul... 219 2e-056
gb|DN494975.1|DN494975 N009C11.5pR Populus bark cDNA librar... 217 6e-056
gb|AJ772216.1|AJ772216 AJ772216 Populus euphratica shoot in... 211 4e-054
gb|CV228298.1|CV228298 WS0191.B21_K13 PT-DX-N-A-10 Populus ... 210 5e-054
gb|CV230081.1|CV230081 WS01915.B21_F22 PT-DX-N-A-10 Populus... 210 5e-054
gb|CV264055.1|CV264055 WS02023.B21_H24 PTxN-IB-N-A-11 Popul... 210 5e-054
gb|CV275032.1|CV275032 WS0175.B21_C07 PTxD-NR-A-8 Populus t... 210 5e-054
gb|DT524325.1|DT524325 WS02042.C21.1_F05 PTxN-IB-N-A-11 Pop... 210 5e-054
gb|CX168355.1|CX168355 A12_69-60_02.ab1 leaf inoculated wit... 206 1e-052
gb|BU897357.1|BU897357 X055G01 Populus wood cDNA library Po... 126 3e-052
gb|CV229682.1|CV229682 WS01914.B21_B17 PT-DX-N-A-10 Populus... 204 6e-052
gb|BU896477.1|BU896477 X041A06 Populus wood cDNA library Po... 198 4e-050
gb|CK088908.1|CK088908 A079P12.3pR Hybrid aspen plasmid lib... 198 4e-050
gb|BU819078.1|BU819078 UA39BPB02 Populus tremula cambium cD... 195 3e-049
gb|BU831269.1|BU831269 T019F02 Populus apical shoot cDNA li... 191 5e-048
gb|CV259929.1|CV259929 WS02012.B21_K15 PTxN-IB-N-A-11 Popul... 159 7e-042
gb|BU891366.1|BU891366 P049D09 Populus petioles cDNA librar... 164 5e-040
gb|BI069529.1|BI069529 C002P54U Populus strain T89 leaves P... 126 3e-033
gb|CK096914.1|CK096914 UB32BPD05.3pR Populus active cambium... 138 2e-032
gb|CN517705.1|CN517705 GQ0092.B3_H22 GQ009 Populus trichoca... 138 2e-032
gb|CN549860.1|CN549860 GQ0243.B3_A18 GQ024 Populus trichoca... 136 1e-031
gb|CF235857.1|CF235857 PtaJXT0027H12H1216 Poplar cDNA libra... 133 1e-030
gb|CV229637.1|CV229637 WS01913.B21_P11 PT-DX-N-A-10 Populus... 133 1e-030
gb|DT469857.1|DT469857 WS01919.C21_B19 PT-DX-N-A-10 Populus... 133 2e-030
gb|BP932002.1|BP932002 BP932002 full-length enriched poplar... 131 4e-030
gb|BP933403.1|BP933403 BP933403 full-length enriched poplar... 130 8e-030
gb|CN522760.1|CN522760 GQ0123.B3_C19 GQ012 Populus trichoca... 127 5e-029
gb|AC149540.1| Populus trichocarpa clone Pop1-111J19, compl... 117 5e-028
gb|DT485310.1|DT485310 WS02527.B21_N20 PT-MB-N-A-15 Populus... 79 2e-023
gb|CV253436.1|CV253436 WS0221.B21_O23 PTxD-ICC-A-12 Populus... 79 2e-023
gb|CF228442.1|CF228442 PtaXM0013A9A0901 Poplar cDNA library... 79 2e-023
gb|CF233701.1|CF233701 PtaJXO0026F5F0511 Poplar cDNA librar... 79 2e-023
gb|DN493190.1|DN493190 X068E11.3pR Populus wood cDNA librar... 108 3e-023
gb|DN503210.1|DN503210 X068E11.5pR Populus wood cDNA librar... 105 2e-022
gb|BU891564.1|BU891564 P052B10 Populus petioles cDNA librar... 74 3e-022
>gb|CN550311.1|CN550311 GQ0243.B3_G13 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0243_G13 5', mRNA sequence
Length = 686
Score = 221 bits (477), Expect = 4e-057
Identities = 87/107 (81%), Positives = 98/107 (91%)
Frame = +1 / +1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MTV D+ VCILAFMPTGWG+LLIAQA +PV+ + G WGS++ LARGYEI+MGLLLFTP
Sbjct: 160 PHMTVQDVIVCILAFMPTGWGMLLIAQACKPVVQRAGFWGSVRTLARGYEIVMGLLLFTP 339
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGH+KDR +RNKE*
Sbjct: 340 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHRKDRSSRNKE* 480
Score = 138 bits (295), Expect = 5e-032
Identities = 64/107 (59%), Positives = 68/107 (63%)
Frame = -2 / -1
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLF RSFL PPR+REICRPLLNAWLNSI VWNSDT GNQAR A GVN
Sbjct: 479 YSLFLEERSFLWPPRMREICRPLLNAWLNSIRVWNSDTKGNQARNATGVNRSKPITISYP 300
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
+PQ+P TG A AI S P PVGMKARM T S TV+ G
Sbjct: 299 RASVRTDPQNPAR*TTGLQA*AIKSIPQPVGMKARMHTMTSCTVI*G 159
>gb|DN493079.1|DN493079 X055G01.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X055G01 3', mRNA sequence
Length = 632
Score = 220 bits (474), Expect = 1e-056
Identities = 86/105 (81%), Positives = 96/105 (91%)
Frame = +1 / -1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MTV D+ VCILAFMPTGWG+LLIAQA +PV+ + G WGS++ LARGYEI+MGLLLFTP
Sbjct: 566 PHMTVQDVIVCILAFMPTGWGMLLIAQACKPVVQRAGFWGSVRTLARGYEIVMGLLLFTP 387
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNK 357
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR +RNK
Sbjct: 386 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRSSRNK 252
Score = 134 bits (288), Expect = 4e-031
Identities = 63/107 (58%), Positives = 67/107 (62%)
Frame = -2 / +1
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+ LF RSFL PPRIREICRPLLNAWLNSI VWNSDT GNQAR A GVN
Sbjct: 247 HPLFLEERSFLWPPRIREICRPLLNAWLNSIRVWNSDTKGNQARNATGVNRSKPMTISYP 426
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
+PQ+P TG A AI S P PVGMKARM T S TV+ G
Sbjct: 427 RASVRTDPQNPAR*TTGLQA*AIKSIPQPVGMKARMHTMTSCTVI*G 567
>gb|DN503094.1|DN503094 X055G01.5pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X055G01 5', mRNA sequence
Length = 599
Score = 220 bits (474), Expect = 1e-056
Identities = 86/105 (81%), Positives = 96/105 (91%)
Frame = +1 / +1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MTV D+ VCILAFMPTGWG+LLIAQA +PV+ + G WGS++ LARGYEI+MGLLLFTP
Sbjct: 67 PHMTVQDVIVCILAFMPTGWGMLLIAQACKPVVQRAGFWGSVRTLARGYEIVMGLLLFTP 246
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNK 357
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR +RNK
Sbjct: 247 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRSSRNK 381
Score = 134 bits (288), Expect = 4e-031
Identities = 63/107 (58%), Positives = 67/107 (62%)
Frame = -2 / -1
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+ LF RSFL PPRIREICRPLLNAWLNSI VWNSDT GNQAR A GVN
Sbjct: 386 HPLFLEERSFLWPPRIREICRPLLNAWLNSIRVWNSDTKGNQARNATGVNRSKPMTISYP 207
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
+PQ+P TG A AI S P PVGMKARM T S TV+ G
Sbjct: 206 RASVRTDPQNPAR*TTGLQA*AIKSIPQPVGMKARMHTMTSCTVI*G 66
>gb|CV232074.1|CV232074 WS0196.B21_H14 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0196_H14 3', mRNA sequence
Length = 677
Score = 219 bits (472), Expect = 2e-056
Identities = 87/107 (81%), Positives = 98/107 (91%)
Frame = +1 / -1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MTV DIFVCILAFMPTGWG+LLIAQA +P++ + G WGS++ LARGYEI+MGLLLFTP
Sbjct: 500 PHMTVQDIFVCILAFMPTGWGMLLIAQACKPIVQRAGFWGSVQTLARGYEIVMGLLLFTP 321
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +RNKE*
Sbjct: 320 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRSSRNKE* 180
Score = 102 bits (217), Expect(2) = 2e-030
Identities = 42/50 (84%), Positives = 43/50 (86%)
Frame = -2 / +1
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVN 213
+SLF RSFL PPRIREICRPLLNAWLNSI VWNSDTNGNQAR A GVN
Sbjct: 181 HSLFLEERSFLGPPRIREICRPLLNAWLNSIRVWNSDTNGNQARNATGVN 330
Score = 100 bits (213), Expect = 1e-020
Identities = 45/105 (42%), Positives = 61/105 (58%)
Frame = +3 / -3
Query: 48 HDGAGHICLHPCFHAHWMGFAADCPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHR 227
+DGAGH+C+H CFHA+W+G A DC S A LG+ +C LR+ G +PVH+
Sbjct: 495 YDGAGHLCMHSCFHANWLGDAFDCTSMQANRSTSRVLGISSDACSWLRNRYGLAPVHSSC 316
Query: 228 LPRLVPVRVGIPDQDAVQPGVQQRSADLPYPGRTQERPRDPEQRI 362
+P LV + V IPD AVQP + RSA+ R +E EQ +
Sbjct: 315 IPCLVSICV*IPDSYAVQPSI**RSANFSNSWRPKEGSLFKEQGV 181
Score = 50.1 bits (103), Expect(2) = 2e-030
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = -1 / +3
Query: 207 KSHQDLVAPGKSLDRAPEPSLVDHRPDRLGNQQQTPSSGHESKDANKYVQHRHAR 43
++H D V K L+ +P+P ++ L NQ+ P+S HESK+A K V HRH R
Sbjct: 336 QAHNDFVTTSKRLN*SPKPCSLNDWLACLCNQKHPPASWHESKNAYKDVLHRHMR 500
>gb|CV246263.1|CV246263 WS0111.B21_N04 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0111_N04 3', mRNA sequence
Length = 722
Score = 219 bits (472), Expect = 2e-056
Identities = 87/107 (81%), Positives = 98/107 (91%)
Frame = +1 / -1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MTV DIFVCILAFMPTGWG+LLIAQA +P++ + G WGS++ LARGYEI+MGLLLFTP
Sbjct: 500 PHMTVQDIFVCILAFMPTGWGMLLIAQACKPIVQRAGFWGSVQTLARGYEIVMGLLLFTP 321
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +RNKE*
Sbjct: 320 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRSSRNKE* 180
Score = 102 bits (217), Expect(2) = 2e-030
Identities = 42/50 (84%), Positives = 43/50 (86%)
Frame = -2 / +1
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVN 213
+SLF RSFL PPRIREICRPLLNAWLNSI VWNSDTNGNQAR A GVN
Sbjct: 181 HSLFLEERSFLGPPRIREICRPLLNAWLNSIRVWNSDTNGNQARNATGVN 330
Score = 100 bits (213), Expect = 1e-020
Identities = 45/105 (42%), Positives = 61/105 (58%)
Frame = +3 / -3
Query: 48 HDGAGHICLHPCFHAHWMGFAADCPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHR 227
+DGAGH+C+H CFHA+W+G A DC S A LG+ +C LR+ G +PVH+
Sbjct: 495 YDGAGHLCMHSCFHANWLGDAFDCTSMQANRSTSRVLGISSDTCSWLRNRYGLAPVHSSC 316
Query: 228 LPRLVPVRVGIPDQDAVQPGVQQRSADLPYPGRTQERPRDPEQRI 362
+P LV + V IPD AVQP + RSA+ R +E EQ +
Sbjct: 315 IPCLVSICV*IPDSYAVQPSI**RSANFSNSWRPKEGSLFKEQGV 181
Score = 50.1 bits (103), Expect(2) = 2e-030
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = -1 / +3
Query: 207 KSHQDLVAPGKSLDRAPEPSLVDHRPDRLGNQQQTPSSGHESKDANKYVQHRHAR 43
++H D V K L+ +P+P ++ L NQ+ P+S HESK+A K V HRH R
Sbjct: 336 QAHNDFVTTSKCLN*SPKPCSLNDWLACLCNQKHPPASWHESKNAYKDVLHRHMR 500
>gb|CV248266.1|CV248266 WS01120.B21_A19 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_A19 3', mRNA sequence
Length = 595
Score = 219 bits (472), Expect = 2e-056
Identities = 87/107 (81%), Positives = 98/107 (91%)
Frame = +1 / -2
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MTV DIFVCILAFMPTGWG+LLIAQA +P++ + G WGS++ LARGYEI+MGLLLFTP
Sbjct: 501 PHMTVQDIFVCILAFMPTGWGMLLIAQACKPIVQRAGFWGSVQTLARGYEIVMGLLLFTP 322
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +RNKE*
Sbjct: 321 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRSSRNKE* 181
Score = 102 bits (217), Expect(2) = 2e-030
Identities = 42/50 (84%), Positives = 43/50 (86%)
Frame = -2 / +2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVN 213
+SLF RSFL PPRIREICRPLLNAWLNSI VWNSDTNGNQAR A GVN
Sbjct: 182 HSLFLEERSFLGPPRIREICRPLLNAWLNSIRVWNSDTNGNQARNATGVN 331
Score = 100 bits (213), Expect = 1e-020
Identities = 45/105 (42%), Positives = 61/105 (58%)
Frame = +3 / -1
Query: 48 HDGAGHICLHPCFHAHWMGFAADCPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHR 227
+DGAGH+C+H CFHA+W+G A DC S A LG+ +C LR+ G +PVH+
Sbjct: 496 YDGAGHLCMHSCFHANWLGDAFDCTSMQANRSTSRVLGISSDTCSWLRNRYGLAPVHSSC 317
Query: 228 LPRLVPVRVGIPDQDAVQPGVQQRSADLPYPGRTQERPRDPEQRI 362
+P LV + V IPD AVQP + RSA+ R +E EQ +
Sbjct: 316 IPCLVSICV*IPDSYAVQPSI**RSANFSNSWRPKEGSLFKEQGV 182
Score = 50.1 bits (103), Expect(2) = 2e-030
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = -1 / +1
Query: 207 KSHQDLVAPGKSLDRAPEPSLVDHRPDRLGNQQQTPSSGHESKDANKYVQHRHAR 43
++H D V K L+ +P+P ++ L NQ+ P+S HESK+A K V HRH R
Sbjct: 337 QAHNDFVTTSKCLN*SPKPCSLNDWLACLCNQKHPPASWHESKNAYKDVLHRHMR 501
>gb|CV249853.1|CV249853 WS01125.B21_I08 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01125_I08 3', mRNA sequence
Length = 735
Score = 219 bits (472), Expect = 2e-056
Identities = 87/107 (81%), Positives = 98/107 (91%)
Frame = +1 / -2
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MTV DIFVCILAFMPTGWG+LLIAQA +P++ + G WGS++ LARGYEI+MGLLLFTP
Sbjct: 500 PHMTVQDIFVCILAFMPTGWGMLLIAQACKPIVQRAGFWGSVQTLARGYEIVMGLLLFTP 321
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +RNKE*
Sbjct: 320 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRSSRNKE* 180
Score = 102 bits (217), Expect(2) = 2e-030
Identities = 42/50 (84%), Positives = 43/50 (86%)
Frame = -2 / +1
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVN 213
+SLF RSFL PPRIREICRPLLNAWLNSI VWNSDTNGNQAR A GVN
Sbjct: 181 HSLFLEERSFLGPPRIREICRPLLNAWLNSIRVWNSDTNGNQARNATGVN 330
Score = 100 bits (213), Expect = 1e-020
Identities = 45/105 (42%), Positives = 61/105 (58%)
Frame = +3 / -1
Query: 48 HDGAGHICLHPCFHAHWMGFAADCPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHR 227
+DGAGH+C+H CFHA+W+G A DC S A LG+ +C LR+ G +PVH+
Sbjct: 495 YDGAGHLCMHSCFHANWLGDAFDCTSMQANRSTSRVLGISSDTCSWLRNRYGLAPVHSSC 316
Query: 228 LPRLVPVRVGIPDQDAVQPGVQQRSADLPYPGRTQERPRDPEQRI 362
+P LV + V IPD AVQP + RSA+ R +E EQ +
Sbjct: 315 IPCLVSICV*IPDSYAVQPSI**RSANFSNSWRPKEGSLFKEQGV 181
Score = 50.1 bits (103), Expect(2) = 2e-030
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = -1 / +3
Query: 207 KSHQDLVAPGKSLDRAPEPSLVDHRPDRLGNQQQTPSSGHESKDANKYVQHRHAR 43
++H D V K L+ +P+P ++ L NQ+ P+S HESK+A K V HRH R
Sbjct: 336 QAHNDFVTTSKCLN*SPKPCSLNDWLACLCNQKHPPASWHESKNAYKDVLHRHMR 500
>gb|CV256705.1|CV256705 WS0244.B21_J09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_J09 3', mRNA sequence
Length = 834
Score = 219 bits (472), Expect = 2e-056
Identities = 87/107 (81%), Positives = 98/107 (91%)
Frame = +1 / -3
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MTV DIFVCILAFMPTGWG+LLIAQA +P++ + G WGS++ LARGYEI+MGLLLFTP
Sbjct: 505 PHMTVQDIFVCILAFMPTGWGMLLIAQACKPIVQRAGFWGSVQTLARGYEIVMGLLLFTP 326
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +RNKE*
Sbjct: 325 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRSSRNKE* 185
Score = 102 bits (217), Expect(2) = 5e-030
Identities = 42/50 (84%), Positives = 43/50 (86%)
Frame = -2 / +3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVN 213
+SLF RSFL PPRIREICRPLLNAWLNSI VWNSDTNGNQAR A GVN
Sbjct: 186 HSLFLEERSFLGPPRIREICRPLLNAWLNSIRVWNSDTNGNQARNATGVN 335
Score = 100 bits (214), Expect = 7e-021
Identities = 45/105 (42%), Positives = 61/105 (58%)
Frame = +3 / -2
Query: 48 HDGAGHICLHPCFHAHWMGFAADCPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHR 227
+DGAGH+C+H CFHA+W+G A DC S A LG+ +C LR+ G +PVH+
Sbjct: 500 YDGAGHLCMHSCFHANWLGDAIDCTSMQANRSTSRVLGISSDTCSWLRNRYGLAPVHSSC 321
Query: 228 LPRLVPVRVGIPDQDAVQPGVQQRSADLPYPGRTQERPRDPEQRI 362
+P LV + V IPD AVQP + RSA+ R +E EQ +
Sbjct: 320 IPCLVSICV*IPDSYAVQPSI**RSANFSNSWRPKEGSLFKEQGV 186
Score = 48.7 bits (100), Expect(2) = 5e-030
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = -2 / +3
Query: 164 EPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
+PQ+P G A AI+S P PVGMKARM T MS TV+ G
Sbjct: 384 DPQNPAR*TIGLHACAINSIPQPVGMKARMHTKMSCTVI*G 506
>gb|DN494975.1|DN494975 N009C11.5pR Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N009C11 5', mRNA sequence
Length = 826
Score = 217 bits (468), Expect = 6e-056
Identities = 86/107 (80%), Positives = 97/107 (90%)
Frame = +1 / +1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MTV DIFVCILAFMPTGWG+LLIAQA +P++ + G WGS++ LARGYEI+MGLLLFTP
Sbjct: 376 PHMTVQDIFVCILAFMPTGWGMLLIAQACKPIVQRAGFWGSVQTLARGYEIIMGLLLFTP 555
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG + DR +RNKE*
Sbjct: 556 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRNDRSSRNKE* 696
Score = 97.3 bits (206), Expect(2) = 6e-029
Identities = 41/50 (82%), Positives = 42/50 (84%)
Frame = -2 / -3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVN 213
+SLF RSFL PPRIREI RPLLNAWLNSI VWNSDTNGNQAR A GVN
Sbjct: 695 HSLFLEERSFLGPPRIREIWRPLLNAWLNSIRVWNSDTNGNQARNATGVN 546
Score = 50.1 bits (103), Expect(2) = 6e-029
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = -1 / -2
Query: 207 KSHQDLVAPGKSLDRAPEPSLVDHRPDRLGNQQQTPSSGHESKDANKYVQHRHAR 43
++H D V K L+ +P+P ++ R L NQ+ P+S HESK+A K V H H R
Sbjct: 540 QAHNDFVTTSKCLN*SPKPCSLNDRLACLCNQKHPPASWHESKNAYKDVLHCHMR 376
>gb|AJ772216.1|AJ772216 AJ772216 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700003A08F1, mRNA sequence
Length = 527
Score = 211 bits (455), Expect = 4e-054
Identities = 85/107 (79%), Positives = 96/107 (89%)
Frame = +1 / -1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MT+ DI VCILAF+P+GWGLLLIAQA +P+I G WGS++ LARGYEI+MGLLLFTP
Sbjct: 518 PHMTIRDIIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTP 339
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +RNKE*
Sbjct: 338 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNKE* 198
Score = 91.3 bits (193), Expect(2) = 4e-027
Identities = 39/61 (63%), Positives = 44/61 (72%)
Frame = -2 / +1
Query: 395 HTNLESAAAQPYSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGV 216
+T+ + YSLF RSFL PPRIREI RP L AWLNSI VWNS+TNGNQA+ A GV
Sbjct: 166 YTSTDEILEMHYSLFLEVRSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGV 345
Query: 215 N 213
N
Sbjct: 346 N 348
Score = 50.1 bits (103), Expect(2) = 4e-027
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -2 / +1
Query: 164 EPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
+PQ P I+G A AISS PHP G ARMQT +S VM G
Sbjct: 397 DPQKPACCISGLQACAISSSPHPEGKNARMQTMISRIVM*G 519
>gb|CV228298.1|CV228298 WS0191.B21_K13 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0191_K13 3', mRNA sequence
Length = 735
Score = 210 bits (454), Expect = 5e-054
Identities = 84/107 (78%), Positives = 96/107 (89%)
Frame = +1 / -1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MT+ D+ VCILAF+P+GWGLLLIAQA +P+I G WGS++ LARGYEI+MGLLLFTP
Sbjct: 690 PHMTIRDVIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTP 511
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +RNKE*
Sbjct: 510 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNKE* 370
Score = 91.3 bits (193), Expect(2) = 9e-027
Identities = 39/61 (63%), Positives = 44/61 (72%)
Frame = -2 / +2
Query: 395 HTNLESAAAQPYSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGV 216
+T+ + YSLF RSFL PPRIREI RP L AWLNSI VWNS+TNGNQA+ A GV
Sbjct: 338 YTSADEILEMHYSLFLEVRSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGV 517
Query: 215 N 213
N
Sbjct: 518 N 520
Score = 48.7 bits (100), Expect(2) = 9e-027
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = -2 / +2
Query: 164 EPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
+PQ P I+G A AISS PHP G ARMQT S VM G
Sbjct: 569 DPQKPACCISGLQACAISSSPHPEGKNARMQTITSRIVM*G 691
>gb|CV230081.1|CV230081 WS01915.B21_F22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01915_F22 3', mRNA sequence
Length = 664
Score = 210 bits (454), Expect = 5e-054
Identities = 84/107 (78%), Positives = 96/107 (89%)
Frame = +1 / +2
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MT+ D+ VCILAF+P+GWGLLLIAQA +P+I G WGS++ LARGYEI+MGLLLFTP
Sbjct: 14 PHMTIRDVIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTP 193
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +RNKE*
Sbjct: 194 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNKE* 334
Score = 91.3 bits (193), Expect(2) = 9e-027
Identities = 39/61 (63%), Positives = 44/61 (72%)
Frame = -2 / -2
Query: 395 HTNLESAAAQPYSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGV 216
+T+ + YSLF RSFL PPRIREI RP L AWLNSI VWNS+TNGNQA+ A GV
Sbjct: 366 YTSADEILEMHYSLFLEVRSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGV 187
Query: 215 N 213
N
Sbjct: 186 N 184
Score = 48.7 bits (100), Expect(2) = 9e-027
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = -2 / -2
Query: 164 EPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
+PQ P I+G A AISS PHP G ARMQT S VM G
Sbjct: 135 DPQKPACCISGLQACAISSSPHPEGKNARMQTITSRIVM*G 13
>gb|CV264055.1|CV264055 WS02023.B21_H24 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02023_H24 3', mRNA sequence
Length = 839
Score = 210 bits (454), Expect = 5e-054
Identities = 84/107 (78%), Positives = 96/107 (89%)
Frame = +1 / -2
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MT+ D+ VCILAF+P+GWGLLLIAQA +P+I G WGS++ LARGYEI+MGLLLFTP
Sbjct: 691 PHMTIRDVIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTP 512
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +RNKE*
Sbjct: 511 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNKE* 371
Score = 91.3 bits (193), Expect(2) = 9e-027
Identities = 39/61 (63%), Positives = 44/61 (72%)
Frame = -2 / +3
Query: 395 HTNLESAAAQPYSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGV 216
+T+ + YSLF RSFL PPRIREI RP L AWLNSI VWNS+TNGNQA+ A GV
Sbjct: 339 YTSADEILEMHYSLFLEVRSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGV 518
Query: 215 N 213
N
Sbjct: 519 N 521
Score = 48.7 bits (100), Expect(2) = 9e-027
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = -2 / +3
Query: 164 EPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
+PQ P I+G A AISS PHP G ARMQT S VM G
Sbjct: 570 DPQKPACCISGLQACAISSSPHPEGKNARMQTITSRIVM*G 692
>gb|CV275032.1|CV275032 WS0175.B21_C07 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0175_C07 3', mRNA sequence
Length = 826
Score = 210 bits (454), Expect = 5e-054
Identities = 84/107 (78%), Positives = 96/107 (89%)
Frame = +1 / -1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MT+ D+ VCILAF+P+GWGLLLIAQA +P+I G WGS++ LARGYEI+MGLLLFTP
Sbjct: 676 PHMTIRDVIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTP 497
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +RNKE*
Sbjct: 496 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNKE* 356
Score = 91.3 bits (193), Expect(2) = 9e-027
Identities = 39/61 (63%), Positives = 44/61 (72%)
Frame = -2 / +3
Query: 395 HTNLESAAAQPYSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGV 216
+T+ + YSLF RSFL PPRIREI RP L AWLNSI VWNS+TNGNQA+ A GV
Sbjct: 324 YTSADEILEMHYSLFLEVRSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGV 503
Query: 215 N 213
N
Sbjct: 504 N 506
Score = 48.7 bits (100), Expect(2) = 9e-027
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = -2 / +3
Query: 164 EPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
+PQ P I+G A AISS PHP G ARMQT S VM G
Sbjct: 555 DPQKPACCISGLQACAISSSPHPEGKNARMQTITSRIVM*G 677
>gb|DT524325.1|DT524325 WS02042.C21.1_F05 PTxN-IB-N-A-11 Populus trichocarpa x Populus
nigra cDNA clone WS02042_F05 3', mRNA sequence
Length = 884
Score = 210 bits (454), Expect = 5e-054
Identities = 84/107 (78%), Positives = 96/107 (89%)
Frame = +1 / -3
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MT+ D+ VCILAF+P+GWGLLLIAQA +P+I G WGS++ LARGYEI+MGLLLFTP
Sbjct: 693 PHMTIRDVIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTP 514
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +RNKE*
Sbjct: 513 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNKE* 373
Score = 91.3 bits (193), Expect(2) = 9e-027
Identities = 39/61 (63%), Positives = 44/61 (72%)
Frame = -2 / +2
Query: 395 HTNLESAAAQPYSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGV 216
+T+ + YSLF RSFL PPRIREI RP L AWLNSI VWNS+TNGNQA+ A GV
Sbjct: 341 YTSADEILEMHYSLFLEVRSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGV 520
Query: 215 N 213
N
Sbjct: 521 N 523
Score = 48.7 bits (100), Expect(2) = 9e-027
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = -2 / +2
Query: 164 EPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
+PQ P I+G A AISS PHP G ARMQT S VM G
Sbjct: 572 DPQKPACCISGLQACAISSSPHPEGKNARMQTITSRIVM*G 694
>gb|CX168355.1|CX168355 A12_69-60_02.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 664
Score = 206 bits (444), Expect = 1e-052
Identities = 83/107 (77%), Positives = 95/107 (88%)
Frame = +1 / +3
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MT+ D+ V ILAF+P+GWGLLLIAQA +P+I G WGS++ LARGYEI+MGLLLFTP
Sbjct: 60 PHMTIRDVIVSILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTP 239
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +RNKE*
Sbjct: 240 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNKE* 380
Score = 91.3 bits (193), Expect(2) = 8e-026
Identities = 39/61 (63%), Positives = 44/61 (72%)
Frame = -2 / -1
Query: 395 HTNLESAAAQPYSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGV 216
+T+ + YSLF RSFL PPRIREI RP L AWLNSI VWNS+TNGNQA+ A GV
Sbjct: 412 YTSADEILEMHYSLFLEVRSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGV 233
Query: 215 N 213
N
Sbjct: 232 N 230
Score = 45.5 bits (93), Expect(2) = 8e-026
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = -2 / -1
Query: 164 EPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
+PQ P I+G A AISS PHP G ARM T S VM G
Sbjct: 181 DPQKPACCISGLQACAISSSPHPEGKNARMLTITSRIVM*G 59
>gb|BU897357.1|BU897357 X055G01 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 426
Score = 126 bits (269), Expect(2) = 3e-052
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +1 / +2
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MTV D+ VCILAFMPTGWG+LLIAQA +PV+ + G WGS++ LARGYEI+MGLLLFTP
Sbjct: 68 PHMTVQDVIVCILAFMPTGWGMLLIAQACKPVVQRAGFWGSVRTLARGYEIVMGLLLFTP 247
Query: 223 IAFLAWFPF 249
+AF PF
Sbjct: 248 VAFPRLVPF 274
Score = 99.6 bits (211), Expect(2) = 3e-052
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = +1 / +3
Query: 232 LAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNK 357
LAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR +RNK
Sbjct: 258 LAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRSSRNK 383
Score = 89.5 bits (189), Expect(2) = 9e-027
Identities = 36/45 (80%), Positives = 38/45 (84%)
Frame = -2 / -3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARK 228
+ LF RSFL PPRIREICRPLLNAWLNSI VWNSDT GNQAR+
Sbjct: 388 HPLFLEERSFLWPPRIREICRPLLNAWLNSIRVWNSDTKGNQARE 254
Score = 50.6 bits (104), Expect(2) = 9e-027
Identities = 28/68 (41%), Positives = 32/68 (47%)
Frame = -2 / -1
Query: 245 GNQARKAMGVNXXXXXXXXXXXXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTN 66
G + A GVN +PQ+P TG A AI S P PVGMKARM T
Sbjct: 270 GTRRGNATGVNRSKPMTISYPRASVRTDPQNPAR*TTGLQA*AIKSIPQPVGMKARMHTM 91
Query: 65 MSSTVMPG 42
S TV+ G
Sbjct: 90 TSCTVI*G 67
>gb|CV229682.1|CV229682 WS01914.B21_B17 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01914_B17 3', mRNA sequence
Length = 679
Score = 204 bits (439), Expect = 6e-052
Identities = 81/103 (78%), Positives = 93/103 (90%)
Frame = +1 / -2
Query: 55 VLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFL 234
+ D+ VCILAF+P+GWGLLLIAQA +P+I G WGS++ LARGYEI+MGLLLFTP+AFL
Sbjct: 678 IRDVIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTPVAFL 499
Query: 235 AWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
AWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +RNKE*
Sbjct: 498 AWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNKE* 370
Score = 91.3 bits (193), Expect(2) = 2e-025
Identities = 39/61 (63%), Positives = 44/61 (72%)
Frame = -2 / +2
Query: 395 HTNLESAAAQPYSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGV 216
+T+ + YSLF RSFL PPRIREI RP L AWLNSI VWNS+TNGNQA+ A GV
Sbjct: 338 YTSADEILEMHYSLFLEVRSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGV 517
Query: 215 N 213
N
Sbjct: 518 N 520
Score = 44.6 bits (91), Expect(2) = 2e-025
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = -2 / +2
Query: 164 EPQSPVLWITGRIAWAISSKPHPVGMKARMQT 69
+PQ P I+G A AISS PHP G ARMQT
Sbjct: 569 DPQKPACCISGLQACAISSSPHPEGKNARMQT 664
>gb|BU896477.1|BU896477 X041A06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 684
Score = 198 bits (426), Expect = 4e-050
Identities = 79/102 (77%), Positives = 90/102 (88%)
Frame = +1 / +3
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MT+ DI VCILAF+P+GWGLLLIAQA +P+I G WGS++ LARGYEI+MGLLLFTP
Sbjct: 51 PHMTIRDIIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTP 230
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGT 348
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +K+ T
Sbjct: 231 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKEDRT 356
Score = 80.8 bits (170), Expect(2) = 5e-024
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = -2 / -3
Query: 347 VPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVN 213
V SFL PPRIREI RP L AWLNSI VWNS+TNGNQA+ A GVN
Sbjct: 355 VRSSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGVN 221
Score = 50.1 bits (103), Expect(2) = 5e-024
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -2 / -3
Query: 164 EPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
+PQ P I+G A AISS PHP G ARMQT +S VM G
Sbjct: 172 DPQKPACCISGLQACAISSSPHPEGKNARMQTMISRIVM*G 50
>gb|CK088908.1|CK088908 A079P12.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A079P12 3', mRNA sequence
Length = 683
Score = 198 bits (426), Expect = 4e-050
Identities = 79/102 (77%), Positives = 90/102 (88%)
Frame = +1 / -1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MT+ DI VCILAF+P+GWGLLLIAQA +P+I G WGS++ LARGYEI+MGLLLFTP
Sbjct: 665 PHMTIRDIIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTP 486
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGT 348
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +K+ T
Sbjct: 485 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKEDRT 360
Score = 80.8 bits (170), Expect(2) = 5e-024
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = -2 / +1
Query: 347 VPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVN 213
V SFL PPRIREI RP L AWLNSI VWNS+TNGNQA+ A GVN
Sbjct: 361 VRSSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGVN 495
Score = 50.1 bits (103), Expect(2) = 5e-024
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -2 / +1
Query: 164 EPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
+PQ P I+G A AISS PHP G ARMQT +S VM G
Sbjct: 544 DPQKPACCISGLQACAISSSPHPEGKNARMQTMISRIVM*G 666
>gb|BU819078.1|BU819078 UA39BPB02 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 497
Score = 195 bits (420), Expect = 3e-049
Identities = 78/102 (76%), Positives = 89/102 (87%)
Frame = +1 / +3
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MT+ DI VCILAF P+GWGLLLIAQA +P+I G WGS++ LARGYEI+MG+LLFTP
Sbjct: 87 PHMTIRDIIVCILAFCPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGVLLFTP 266
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGT 348
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +K+ T
Sbjct: 267 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKEDRT 392
Score = 80.8 bits (170), Expect(2) = 4e-024
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = -2 / -2
Query: 347 VPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVN 213
V SFL PPRIREI RP L AWLNSI VWNS+TNGNQA+ A GVN
Sbjct: 391 VRSSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGVN 257
Score = 50.6 bits (104), Expect(2) = 4e-024
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -2 / -2
Query: 164 EPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
+PQ P I+G A AISS PHP G ARMQT +S VM G
Sbjct: 208 DPQKPACCISGLQACAISSSPHPEGQNARMQTMISRIVM*G 86
>gb|BU831269.1|BU831269 T019F02 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 694
Score = 191 bits (411), Expect = 5e-048
Identities = 78/102 (76%), Positives = 89/102 (87%)
Frame = +1 / +2
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MT+ DI VCILAF+P+GWGLLLIAQA +P+I G WGS++ LARGYEI+MGLLLFTP
Sbjct: 170 PHMTIRDIIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTP 349
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGT 348
+AFLA FPFVSEFQTRMLFNQAFSRGLQISRILGG +K+ T
Sbjct: 350 VAFLA*FPFVSEFQTRMLFNQAFSRGLQISRILGGPRKEDRT 475
Score = 76.7 bits (161), Expect(2) = 8e-023
Identities = 33/45 (73%), Positives = 35/45 (77%)
Frame = -2 / -2
Query: 347 VPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVN 213
V SFL PPRIREI RP L AWLNSI VWNS+TNGN A+ A GVN
Sbjct: 474 VRSSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGN*AKNATGVN 340
Score = 50.1 bits (103), Expect(2) = 8e-023
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -2 / -2
Query: 164 EPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
+PQ P I+G A AISS PHP G ARMQT +S VM G
Sbjct: 291 DPQKPACCISGLQACAISSSPHPEGKNARMQTMISRIVM*G 169
>gb|CV259929.1|CV259929 WS02012.B21_K15 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02012_K15 3', mRNA sequence
Length = 495
Score = 159 bits (341), Expect(2) = 7e-042
Identities = 64/87 (73%), Positives = 74/87 (85%)
Frame = +1 / -3
Query: 103 GLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFN 282
G AQA +P++ + G WGS++ LARGYEI+MGLLLFTP+AFLAWFPF SEFQTRMLFN
Sbjct: 448 GCF*FAQACKPIVQRAGFWGSVQTLARGYEIVMGLLLFTPVAFLAWFPFGSEFQTRMLFN 269
Query: 283 QAFSRGLQISRILGGHKKDRGTRNKE* 363
QAFSRGLQISRI GG +KDR +RNKE*
Sbjct: 268 QAFSRGLQISRIFGGPRKDRFSRNKE* 188
Score = 96.8 bits (205), Expect(3) = 5e-024
Identities = 39/50 (78%), Positives = 42/50 (84%)
Frame = -2 / +3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVN 213
+SLF RSFL PP+IREIC+PLLNAWLNSI VWNSD NGNQAR A GVN
Sbjct: 189 HSLFLEKRSFLGPPKIREICKPLLNAWLNSIRVWNSDPNGNQARNATGVN 338
Score = 31.8 bits (63), Expect(2) = 7e-042
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3 / -1
Query: 69 CLHPCFHAHWMGFAAD 116
C H CFH++W+G A D
Sbjct: 483 CRHSCFHSNWLGDAFD 436
Score = 29.0 bits (57), Expect(3) = 5e-024
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -2 / +1
Query: 116 ISSKPHPVGMKARMQT 69
I S P PVGMKARM T
Sbjct: 436 IKSIPQPVGMKARMPT 483
Score = 22.6 bits (43), Expect(3) = 5e-024
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -1 / +2
Query: 207 KSHQDLVAPGKSLDRAPEPSLVDHRPDRLGNQQQTPS 97
++H D V K L+ +P+P +++ L + +PS
Sbjct: 344 QAHNDFVTTSKCLN*SPKPCSLNYWLACLCKSKASPS 454
>gb|BU891366.1|BU891366 P049D09 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 371
Score = 164 bits (353), Expect = 5e-040
Identities = 65/86 (75%), Positives = 74/86 (86%)
Frame = +1 / +3
Query: 103 GLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFN 282
G+LLIAQA +PV + G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRML N
Sbjct: 3 GMLLIAQACKPVAQRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLVN 182
Query: 283 QAFSRGLQISRILGGHKKDRGTRNKE 360
QAF+RGLQ S LGGH KDR +RNKE
Sbjct: 183 QAFNRGLQTSSTLGGHNKDRSSRNKE 260
>gb|BI069529.1|BI069529 C002P54U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 369
Score = 126 bits (270), Expect(2) = 3e-033
Identities = 48/66 (72%), Positives = 56/66 (84%)
Frame = +1 / +2
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MT+ DI VCILAF+P+GWGLLLIAQA +P+I G WGS++ LARGYEI MGLLLFTP
Sbjct: 47 PHMTIRDIIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIXMGLLLFTP 226
Query: 223 IAFLAW 240
+AFLAW
Sbjct: 227 VAFLAW 244
Score = 35.4 bits (71), Expect(2) = 3e-033
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1 / +1
Query: 232 LAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE*G 366
L PFVSE QTRML NQAF + S + G + +++ G
Sbjct: 235 LGLVPFVSEXQTRMLXNQAFKSEVFRSPVFFGGPRKEDRTSRKQG 369
>gb|CK096914.1|CK096914 UB32BPD05.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB32BPD05 3', mRNA sequence
Length = 579
Score = 138 bits (297), Expect = 2e-032
Identities = 55/95 (57%), Positives = 70/95 (73%)
Frame = +1 / -3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+++ D+ VC LAF+PTGWGL+LIAQA RP I +TGLW + LAR Y+ M ++LF P+A
Sbjct: 412 LSMKDLIVCCLAFLPTGWGLILIAQAARPKIEETGLWHFTRVLARAYDYGMSVVLFAPVA 233
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHK 333
LAW P +S FQTR LFN+AF+R LQI IL G K
Sbjct: 232 VLAWLPVISAFQTRFLFNEAFNRHLQIQPILAGKK 128
>gb|CN517705.1|CN517705 GQ0092.B3_H22 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0092_H22 5', mRNA sequence
Length = 481
Score = 138 bits (297), Expect = 2e-032
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = +1 / +3
Query: 166 IKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR
Sbjct: 3 VRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRT 182
Query: 346 TRNKE* 363
+RNKE*
Sbjct: 183 SRNKE* 200
>gb|CN549860.1|CN549860 GQ0243.B3_A18 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0243_A18 5', mRNA sequence
Length = 536
Score = 136 bits (292), Expect = 1e-031
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +1 / +1
Query: 175 LARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRN 354
LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +RN
Sbjct: 1 LARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRN 180
Query: 355 KE* 363
KE*
Sbjct: 181 KE* 189
>gb|CF235857.1|CF235857 PtaJXT0027H12H1216 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 615
Score = 133 bits (285), Expect = 1e-030
Identities = 53/95 (55%), Positives = 72/95 (75%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+++ D+F LAF+ TGW +L IA A + ++ GLW S++ AR Y+ MG+L+F PIA
Sbjct: 151 LSIPDLFASFLAFIATGWTILSIAIAWKRIVWSLGLWDSVREFARMYDAGMGVLIFVPIA 330
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHK 333
FL+WFPFVS FQ+R+LFNQAFSRGL+IS IL G+K
Sbjct: 331 FLSWFPFVSTFQSRLLFNQAFSRGLEISLILAGNK 435
>gb|CV229637.1|CV229637 WS01913.B21_P11 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01913_P11 3', mRNA sequence
Length = 718
Score = 133 bits (285), Expect = 1e-030
Identities = 53/95 (55%), Positives = 72/95 (75%)
Frame = +1 / -2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+++ D+F LAF+ TGW +L IA A + ++ GLW S++ AR Y+ MG+L+F PIA
Sbjct: 555 LSIPDLFASFLAFIATGWTILSIAIAWKRIVWSLGLWDSVREFARMYDAGMGVLIFVPIA 376
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHK 333
FL+WFPFVS FQ+R+LFNQAFSRGL+IS IL G+K
Sbjct: 375 FLSWFPFVSTFQSRLLFNQAFSRGLEISLILAGNK 271
>gb|DT469857.1|DT469857 WS01919.C21_B19 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01919_B19 3', mRNA sequence
Length = 651
Score = 133 bits (284), Expect = 2e-030
Identities = 53/87 (60%), Positives = 70/87 (80%)
Frame = +1 / -2
Query: 85 FMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQ 264
F+PT WG+L IA A +PV+ + GLW SI+++AR Y+ MG+L+F PIAFL+WFPFVS FQ
Sbjct: 650 FIPTIWGILSIASAWKPVMKRMGLWKSIRSIARLYDAGMGMLIFIPIAFLSWFPFVSTFQ 471
Query: 265 TRMLFNQAFSRGLQISRILGGHKKDRG 345
TR++FNQAFSRGL+IS IL G+ + G
Sbjct: 470 TRLMFNQAFSRGLEISLILAGNNPNIG 390
>gb|BP932002.1|BP932002 BP932002 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-030_I23.r 3', mRNA sequence
Length = 587
Score = 131 bits (281), Expect = 4e-030
Identities = 53/94 (56%), Positives = 70/94 (74%)
Frame = +1 / -1
Query: 52 TVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAF 231
++ D+F LAF+ TGW +L IA A + ++ GLW S++ AR Y+ MG L+F PIAF
Sbjct: 557 SIPDLFASFLAFIATGWTILSIAIAWKRIVWSLGLWDSVREFARMYDAGMGALIFVPIAF 378
Query: 232 LAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHK 333
L+WFPFVS FQ+R+LFNQAFSRGL+IS IL G+K
Sbjct: 377 LSWFPFVSTFQSRLLFNQAFSRGLEISLILAGNK 276
>gb|BP933403.1|BP933403 BP933403 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-050_P13.r 3', mRNA sequence
Length = 620
Score = 130 bits (279), Expect = 8e-030
Identities = 53/94 (56%), Positives = 69/94 (73%)
Frame = +1 / -2
Query: 52 TVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAF 231
++ D+F LAF+ TGW +L IA A + ++ GLW S++ AR Y+ MG L+F PIAF
Sbjct: 559 SIPDLFASFLAFIATGWTILSIAIAWKRIVWSLGLWDSVREFARMYDAGMGALIFVPIAF 380
Query: 232 LAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHK 333
L+WFPFVS FQ R+LFNQAFSRGL+IS IL G+K
Sbjct: 379 LSWFPFVSTFQPRLLFNQAFSRGLEISLILAGNK 278
>gb|CN522760.1|CN522760 GQ0123.B3_C19 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0123_C19 5', mRNA sequence
Length = 336
Score = 127 bits (273), Expect = 5e-029
Identities = 50/76 (65%), Positives = 60/76 (78%)
Frame = +1 / +1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MT+ D+ V ILAF+P+GWGLLLIAQA +P+I G WGS++ LARGYEI+MGLLLFTP
Sbjct: 106 PHMTIRDVIVSILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTP 285
Query: 223 IAFLAWFPFVSEFQTR 270
+AF FPFVS TR
Sbjct: 286 VAFXXXFPFVSXXXTR 333
>gb|AC149540.1| Populus trichocarpa clone Pop1-111J19, complete sequence
Length = 96953
Score = 117 bits (250), Expect(2) = 5e-028
Identities = 47/77 (61%), Positives = 62/77 (80%)
Frame = +1 / +3
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IA A +PV+ + GLW SI+++AR Y+ MG+L+F PIAFL+WFPFVS FQTR++FNQAFS
Sbjct: 30894 IASAWKPVVKRMGLWKSIRSIARLYDAGMGMLIFIPIAFLSWFPFVSTFQTRLMFNQAFS 31073
Query: 295 RGLQISRILGGHKKDRG 345
RGL+IS IL G+ + G
Sbjct: 31074 RGLEISLILAGNNPNIG 31124
Score = 35.9 bits (72), Expect(2) = 5e-028
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIA 120
++V DIF ILAF+PT WG+L ++
Sbjct: 30106 LSVSDIFASILAFIPTIWGILSVS 30177
>gb|DT485310.1|DT485310 WS02527.B21_N20 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02527_N20 3', mRNA sequence
Length = 840
Score = 78.5 bits (165), Expect(2) = 2e-023
Identities = 29/60 (48%), Positives = 44/60 (73%)
Frame = +1 / -3
Query: 154 LWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHK 333
LW ++ ++AR Y+IL G+++ P+AFL+W P QTR+LFN+AFSRGL+I ++ G K
Sbjct: 589 LWEAVVSVARLYDILFGVIVMVPVAFLSWMPGFQSMQTRILFNEAFSRGLRIFQLFTGKK 410
Score = 50.6 bits (104), Expect(2) = 2e-023
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +1 / -3
Query: 61 DIFVCILAFMPTGWGLLLIAQAIRPVI 141
D+F +LAF+PTGWG+LLIAQ +RP +
Sbjct: 679 DVFTSLLAFIPTGWGILLIAQVLRPFL 599
>gb|CV253436.1|CV253436 WS0221.B21_O23 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0221_O23 3', mRNA sequence
Length = 741
Score = 78.5 bits (165), Expect(2) = 2e-023
Identities = 29/60 (48%), Positives = 44/60 (73%)
Frame = +1 / -2
Query: 154 LWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHK 333
LW ++ ++AR Y+IL G+++ P+AFL+W P QTR+LFN+AFSRGL+I ++ G K
Sbjct: 587 LWEAVVSVARLYDILFGVIVMVPVAFLSWMPGFQSMQTRILFNEAFSRGLRIFQLFTGKK 408
Score = 50.6 bits (104), Expect(2) = 2e-023
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +1 / -2
Query: 61 DIFVCILAFMPTGWGLLLIAQAIRPVI 141
D+F +LAF+PTGWG+LLIAQ +RP +
Sbjct: 677 DVFTSLLAFIPTGWGILLIAQVLRPFL 597
>gb|CF228442.1|CF228442 PtaXM0013A9A0901 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 722
Score = 78.5 bits (165), Expect(2) = 2e-023
Identities = 29/60 (48%), Positives = 44/60 (73%)
Frame = +1 / +2
Query: 154 LWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHK 333
LW ++ ++AR Y+IL G+++ P+AFL+W P QTR+LFN+AFSRGL+I ++ G K
Sbjct: 155 LWEAVVSVARLYDILFGVIVMVPVAFLSWMPGFQSMQTRILFNEAFSRGLRIFQLFTGKK 334
Score = 50.6 bits (104), Expect(2) = 2e-023
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +1 / +2
Query: 61 DIFVCILAFMPTGWGLLLIAQAIRPVI 141
D+F +LAF+PTGWG+LLIAQ +RP +
Sbjct: 65 DVFTSLLAFIPTGWGILLIAQVLRPFL 145
>gb|CF233701.1|CF233701 PtaJXO0026F5F0511 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 654
Score = 78.5 bits (165), Expect(2) = 2e-023
Identities = 29/60 (48%), Positives = 44/60 (73%)
Frame = +1 / +1
Query: 154 LWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHK 333
LW ++ ++AR Y+IL G+++ P+AFL+W P QTR+LFN+AFSRGL+I ++ G K
Sbjct: 205 LWEAVVSVARLYDILFGVIVMVPVAFLSWMPGFQSMQTRILFNEAFSRGLRIFQLFTGKK 384
Score = 50.6 bits (104), Expect(2) = 2e-023
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +1 / +1
Query: 61 DIFVCILAFMPTGWGLLLIAQAIRPVI 141
D+F +LAF+PTGWG+LLIAQ +RP +
Sbjct: 115 DVFTSLLAFIPTGWGILLIAQVLRPFL 195
>gb|DN493190.1|DN493190 X068E11.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X068E11 3', mRNA sequence
Length = 807
Score = 108 bits (231), Expect = 3e-023
Identities = 44/73 (60%), Positives = 57/73 (78%)
Frame = +1 / -3
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IA A + ++ GLW S++ AR Y+ MG+L+F PIAFL+WFPFVS FQ+R+LFNQAFS
Sbjct: 637 IAIAWKRIVWSLGLWDSVREFARMYDAGMGVLIFVPIAFLSWFPFVSTFQSRLLFNQAFS 458
Query: 295 RGLQISRILGGHK 333
RGL+IS IL G+K
Sbjct: 457 RGLEISLILAGNK 419
>gb|DN503210.1|DN503210 X068E11.5pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X068E11 5', mRNA sequence
Length = 524
Score = 105 bits (225), Expect = 2e-022
Identities = 43/71 (60%), Positives = 55/71 (77%)
Frame = +1 / +3
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IA A + ++ GLW S++ AR Y+ MG+L+F PIAFL+WFPFVS FQ+R+LFNQAFS
Sbjct: 312 IAIAWKRIVWSLGLWDSVREFARMYDAGMGVLIFVPIAFLSWFPFVSTFQSRLLFNQAFS 491
Query: 295 RGLQISRILGG 327
RGL+IS IL G
Sbjct: 492 RGLEISLILAG 524
>gb|BU891564.1|BU891564 P052B10 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 558
Score = 74.4 bits (156), Expect(2) = 3e-022
Identities = 27/58 (46%), Positives = 42/58 (72%)
Frame = +1 / +2
Query: 154 LWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG 327
LW ++ ++AR Y+IL G+++ P+AFL+W P QT +LFN+AFSRGL+I ++ G
Sbjct: 383 LWEAVVSVARLYDILFGVIVMVPVAFLSWMPAFQSMQTTILFNEAFSRGLRIFQLFTG 556
Score = 50.6 bits (104), Expect(2) = 3e-022
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +1 / +2
Query: 61 DIFVCILAFMPTGWGLLLIAQAIRPVI 141
D+F +LAF+PTGWG+LLIAQ +RP +
Sbjct: 293 DVFTSLLAFIPTGWGILLIAQVLRPFL 373
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 330,280,939
Number of Sequences: 369679
Number of extensions: 4676468
Number of successful extensions: 41428
Number of sequences better than 1.0e-020: 53
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 8598585660
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)