TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404801.2.3
(1028 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA823228.1|CA823228 R22G04 two-month-old roots from clon... 369 e-114
gb|DT469311.1|DT469311 WS01917.C21_G04 PT-DX-N-A-10 Populus... 374 e-103
gb|CV240638.1|CV240638 WS0251.B21_O23 PT-MB-N-A-15 Populus ... 221 5e-091
gb|BU835584.1|BU835584 T075G07 Populus apical shoot cDNA li... 270 2e-078
gb|CV246013.1|CV246013 WS0259.B21_P22 PT-MB-N-A-15 Populus ... 233 3e-062
gb|CN520738.1|CN520738 GQ0108.B3_L05 GQ010 Populus trichoca... 238 3e-062
gb|BU832929.1|BU832929 T039H07 Populus apical shoot cDNA li... 149 9e-060
gb|CN524305.1|CN524305 GQ015M13.T3_E09 GQ015 Populus tricho... 134 3e-049
gb|CN518723.1|CN518723 GQ0104.B3_E10 GQ010 Populus trichoca... 194 6e-049
gb|BU894173.1|BU894173 X003H07 Populus wood cDNA library Po... 132 4e-046
gb|BU812023.1|BU812023 UL91TD02 Populus leaf cDNA library P... 132 4e-046
gb|BI127370.1|BI127370 G059P39Y Populus cambium cDNA librar... 132 6e-046
gb|CV231236.1|CV231236 WS0193.B21_O22 PT-DX-N-A-10 Populus ... 131 1e-045
gb|BU880106.1|BU880106 UM41TE06 Populus flower cDNA library... 129 6e-045
gb|BI138167.1|BI138167 F100P23Y Populus flower cDNA library... 132 3e-044
gb|CV269504.1|CV269504 WS0208.B21_G24 PTxN-IB-N-A-11 Populu... 178 4e-044
gb|CV267224.1|CV267224 WS02031.B21_C18 PTxN-IB-N-A-11 Popul... 131 5e-043
gb|CK090838.1|CK090838 F027P19.3pR Populus flower cDNA libr... 169 3e-041
gb|DV464201.1|DV464201 MTUNUL1.P24.D07 NUL Populus fremonti... 97 2e-040
gb|BU894661.1|BU894661 X012H09 Populus wood cDNA library Po... 97 1e-039
gb|CK097248.1|CK097248 UB44DPH02.3pR Populus active cambium... 132 9e-039
gb|DT516220.1|DT516220 WS02430.B21_L23 PTxD-ICC-N-A-14 Popu... 131 2e-037
gb|DN488212.1|DN488212 R041G07.3pR Populus root cDNA librar... 130 2e-036
gb|AJ777572.1|AJ777572 AJ777572 Populus euphratica root 3-6... 111 2e-035
gb|CV274847.1|CV274847 WS0174.B21.1_J06 PTxD-NR-A-8 Populus... 131 7e-035
gb|CA931177.1|CA931177 MTU2TA.P3.D04 Aspen apex cDNA Librar... 138 4e-034
gb|BU818866.1|BU818866 UA35CPF05 Populus tremula cambium cD... 131 9e-034
gb|DT480982.1|DT480982 WS02530.BR_I12 PT-MB-N-A-15 Populus ... 143 2e-033
gb|DT486279.1|DT486279 WS02530.B21_I12 PT-MB-N-A-15 Populus... 143 2e-033
gb|DV464515.1|DV464515 MTUNUL1.P28.E03 NUL Populus fremonti... 131 2e-033
gb|AJ772440.1|AJ772440 AJ772440 Populus euphratica shoot in... 134 7e-031
gb|BU898140.1|BU898140 X075D09 Populus wood cDNA library Po... 130 3e-030
gb|CX171314.1|CX171314 G11_69-94_13.ab1 leaf inoculated wit... 132 5e-030
gb|BU894478.1|BU894478 X010A02 Populus wood cDNA library Po... 131 9e-030
gb|CK096964.1|CK096964 UB34DPA12.3pR Populus active cambium... 130 1e-029
gb|BU819274.1|BU819274 UA41BPG08 Populus tremula cambium cD... 130 2e-029
gb|BU896276.1|BU896276 X038C04 Populus wood cDNA library Po... 128 6e-029
gb|BU896297.1|BU896297 X038E11 Populus wood cDNA library Po... 128 6e-029
gb|DT488774.1|DT488774 WS02537.B21_G04 PT-MB-N-A-15 Populus... 122 5e-027
gb|CK100043.1|CK100043 B006P29.5pR Hybrid aspen plasmid lib... 119 3e-026
gb|BU891188.1|BU891188 P047A12 Populus petioles cDNA librar... 111 2e-025
gb|CV227387.1|CV227387 WS0167.B21_A17 PT-DX-A-7 Populus tri... 113 2e-024
gb|CK099351.1|CK099351 A063P66.5pR Hybrid aspen plasmid lib... 99 4e-024
gb|CK103023.1|CK103023 G100P25.5pR Populus tension wood cDN... 68 1e-022
gb|DN484863.1|DN484863 K029P19.3pR Populus apical shoot cDN... 93 3e-022
gb|CK117051.1|CK117051 B024P66 Hybrid aspen plasmid library... 99 6e-022
>gb|CA823228.1|CA823228 R22G04 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 659
Score = 369 bits (799), Expect(2) = e-114
Identities = 143/172 (83%), Positives = 158/172 (91%)
Frame = +3 / +2
Query: 141 EAEDDGLIRECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEK 320
E ED+G+IRE L+DFY +SGKRKPDQ+IIFRDGVSESQFNQVLNIEL QIIEACKFLDEK
Sbjct: 140 ETEDEGIIRELLLDFYVTSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEK 319
Query: 321 WNPKFTLIIAQKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPT 500
W+P F +I+AQKNHHTKFF PG PDNVPPGT++DNKVCHP+N DFY+CAHAGMIGTTRPT
Sbjct: 320 WSPTFVVIVAQKNHHTKFFQPGSPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPT 499
Query: 501 HYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQ 656
HYH+L DE+GFS DDLQ VHSLSYVYQRSTTAISVVAPICYAHLAA Q+GQ
Sbjct: 500 HYHVLLDEVGFSADDLQXPVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQ 655
Score = 155 bits (334), Expect(3) = 7e-054
Identities = 77/124 (62%), Positives = 82/124 (66%)
Frame = -2 / -3
Query: 658 NWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPI 479
NWP *Q+GATT+MAVVLLWY S KP SS + W**VGLVVPI
Sbjct: 657 NWPI*VAARWA*QIGATTEMAVVLLWYTYERECTGSCRSSAEKPTSSNKTW**VGLVVPI 478
Query: 478 IPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSRNLQ 299
IPA A *KS F GWQTLLS VPGGTLSG PG KNLV FF A I N+G HFSSRNL
Sbjct: 477 IPA*AQR*KSLFLGWQTLLSMIVPGGTLSGDPGWKNLVWWFF*ATITTNVGDHFSSRNLH 298
Query: 298 ASMI 287
AS+I
Sbjct: 297 ASII 286
Score = 155 bits (332), Expect(2) = 4e-042
Identities = 79/171 (46%), Positives = 109/171 (63%)
Frame = -1 / -2
Query: 656 LANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVVVSWPRSPDH 477
LA+LSSCQ+ +AD G A LV+I E MH+ LQII + L+ Q++VVS P SP+H
Sbjct: 655 LAHLSSCQVGIADWCXYRDGSRASLVYI*EGMHRXLQIIC*KTNLV*QNMVVSRPCSPNH 476
Query: 476 SSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGIPFLIKKFAS 297
SM T +E+ V WMADFVV+ + W II SR EKFSV++ L N + P LIKK A
Sbjct: 475 PSMSTEIEVIVSWMADFVVNDRTRWYIIRRSRLEKFSVVVFLSYNYHKRWGPLLIKKLAR 296
Query: 296 LDDLLQLNVQHLIKLTFANTVPEYDNLVRLSLPRTGVEVNQTLPDQTIIFS 144
L+ L+Q N+Q LI+L F + V +YD+L+ + ++V Q LP+ + I S
Sbjct: 295 LNYLIQFNIQDLIEL*FTDPVSKYDDLIGFPFS*SHIKV*QKLPNYSFILS 143
Score = 70.7 bits (148), Expect(3) = 7e-054
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = -2 / -3
Query: 133 LNNESIISIFGDWVRTDALYFEIRGHSRELTTAATDGTSECPG 5
LNNESIIS FGD VRT A EI+GH ELTTAA +GTS+CPG
Sbjct: 129 LNNESIISSFGDCVRTHAR*REIKGHCLELTTAAIEGTSDCPG 1
Score = 65.7 bits (137), Expect(2) = e-114
Identities = 27/50 (54%), Positives = 31/50 (62%)
Frame = +3 / +2
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDD 155
PG R+WPLIS+YRA VRTQSPK+EMIDSLFK +D
Sbjct: 2 PGQSDVPSIAAVVSSRQWPLISRYRACVRTQSPKLEMIDSLFKRVSETED 151
Score = 37.3 bits (75), Expect(2) = 4e-042
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -1 / -2
Query: 134 LKQ*VNHFHFW*LGADRCSVFRDKRPFTRTNNSSNRRYIRMSR 6
LK *+NH W L + C + R++RP + SN R IR+ R
Sbjct: 130 LK**INHLKLWGLCSHTCPIARNQRPLPGADYRSN*RDIRLPR 2
Score = 23.5 bits (45), Expect(3) = 7e-054
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 214 SGFLFPELV*K 182
SGFLFPE+ *K
Sbjct: 213 SGFLFPEVT*K 181
>gb|DT469311.1|DT469311 WS01917.C21_G04 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01917_G04 3', mRNA sequence
Length = 809
Score = 374 bits (810), Expect = e-103
Identities = 149/202 (73%), Positives = 165/202 (81%)
Frame = +3 / -3
Query: 186 YTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHH 365
Y SSG+ KP Q+IIFRDGVSESQFNQVLNIEL QIIEACKFLDE W+PKFT+I+AQKNHH
Sbjct: 807 YRSSGQTKPAQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDESWSPKFTVIVAQKNHH 628
Query: 366 TKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDD 545
TKFF G PDNVPPGTV+DN VCHP+++DFYMCAHAGMIGTTRPTHYH+L DEIGFS DD
Sbjct: 627 TKFFQDGSPDNVPPGTVIDNAVCHPQSYDFYMCAHAGMIGTTRPTHYHVLLDEIGFSADD 448
Query: 546 LQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXV 725
LQEL+HSLSYVYQRSTTAISVVAP+ YAHLAA Q+ QF+K D+M
Sbjct: 447 LQELIHSLSYVYQRSTTAISVVAPVRYAHLAATQISQFLKCDDMSETSSSHGGLTSAGQT 268
Query: 726 PVQELPRLHEKVRSSMFFC*AV 791
PV ELP LH V SSMFFC* +
Sbjct: 267 PVPELPELHRNVCSSMFFC*CL 202
Score = 195 bits (421), Expect = 3e-049
Identities = 96/200 (48%), Positives = 129/200 (64%)
Frame = -1 / +1
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND 606
SA++HRA + R+L R RS +M G L H+I L EL NLS CQ+ + D SN
Sbjct: 208 SAEKHRAADIPV*LRKLGHRGLPSRS*TSMARGCL*HVITLQEL*NLSCCQVSITDRSNY 387
Query: 605 *YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADF 426
Y CCA LVHIR+R++QLL II +A LI ++V++ WP H M THVEI LW+ +
Sbjct: 388 RYCCCASLVHIRQRVNQLL*IIS*KANLI*KNVIMCWPCCSYHPCMCTHVEIIALWVTNS 567
Query: 425 VVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGIPFLIKKFASLDDLLQLNVQHLIKLTF 246
++++ S +I+W S EKFSVMI L NN ELG P IK+ A L+DL+QL+V+ LI+L
Sbjct: 568 IINNGSRRNIVWRSILEKFSVMIFLCNNNSELG*PAFIKELACLNDLIQLDVEDLIEL*L 747
Query: 245 ANTVPEYDNLVRLSLPRTGV 186
AN++PEYD L L RT +
Sbjct: 748 ANSIPEYDYLSWFCLARTPI 807
Score = 121 bits (259), Expect(3) = 2e-046
Identities = 62/82 (75%), Positives = 62/82 (75%)
Frame = -2 / +2
Query: 532 KPISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FF 353
KPISS R * VGLVVPIIPACAHM*KS G QT LS TVPGGTLSG P KNLV**FF
Sbjct: 461 KPISSKRT**CVGLVVPIIPACAHM*KS*LCG*QTALSITVPGGTLSGDPSWKNLV**FF 640
Query: 352 WAIINVNLGFHFSSRNLQASMI 287
A I VNLG SSRNL ASMI
Sbjct: 641 CATITVNLGDQLSSRNLHASMI 706
Score = 104 bits (221), Expect = 1e-021
Identities = 67/159 (42%), Positives = 77/159 (48%)
Frame = -3 / +3
Query: 699 HDWRTSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSH 520
H R S T H T + E LP + EQ I LLC FGTHK + P DHQ S SH
Sbjct: 294 HGSRMSLTCHHTSRIVKSELLPSEHNGQEQLQILLLCFFGTHKTKSESTPVDHQLKSQSH 473
Query: 519 HAGCGSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHYLAFQE*KI*CDDSSGQ*S 340
+ LA S H HTCRN S + + +F H L KI*CDD S Q
Sbjct: 474 LKERDNVLALLFLSSLHVHTCRNHSFVGDKQHYQ*RFQEEHCLEIHLGKI*CDDFSVQQ* 653
Query: 339 T*TWDSISHQEICKPR*FVATQCSAPD*TDFR*HRP*I* 223
*TW + HQ C P+*F +C D*T R* P*I*
Sbjct: 654 Q*TWVTSFHQGTCMPQ*FDPARC*GLD*TVTR*LHP*I* 770
Score = 71.6 bits (150), Expect(3) = 3e-026
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +2 / -2
Query: 191 QFWEEKA*PSYHIQGRC*RKSV*SGAEH*VATNHRGLQIS**EMESQVHVDYCPEESSH* 370
+FW K HIQG *R +V S +H +NH G+Q+ **++ +QVH C E+SSH*
Sbjct: 802 EFWPNKTSSDNHIQGWS*RVTVQSSPQHRAGSNH*GMQVP**KLVTQVHCYCCTEKSSH* 623
Query: 371 IFHSWKAR*CPTRN 412
IF W +R C + N
Sbjct: 622 IFPRWISRQCSSWN 581
Score = 70.7 bits (148), Expect(3) = 2e-046
Identities = 31/43 (72%), Positives = 33/43 (76%)
Frame = -2 / +2
Query: 784 QQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMN 656
QQKNIEL TF C GSS TG PAEV PP LEDVSD+SS+F N
Sbjct: 209 QQKNIELQTFRCSSGSSGTGVCPAEVRPPWLEDVSDMSSHFKN 337
Score = 51.9 bits (107), Expect(3) = 3e-026
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +2 / -2
Query: 569 LLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQSWRAYF 712
+LCVPK+HNS+I CS L + GS S + + +V * V D+L+ WR+ F
Sbjct: 424 VLCVPKKHNSNICSCSCPLCSLGSNSDFTILEV**HVRDILEPWRSNF 281
Score = 33.1 bits (66), Expect(3) = 3e-026
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2 / -2
Query: 431 LPSKELRFLHVCACWNDRDYEANSL 505
L +L FLHVC C +DR+ +AN+L
Sbjct: 562 LSPTKL*FLHVCTCRDDRNNKANTL 488
Score = 32.7 bits (65), Expect(3) = 2e-046
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2 / +2
Query: 616 GATTDMAVVLLWY 578
GATTD+AVVLLWY
Sbjct: 377 GATTDIAVVLLWY 415
>gb|CV240638.1|CV240638 WS0251.B21_O23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0251_O23 3', mRNA sequence
Length = 872
Score = 221 bits (478), Expect(2) = 5e-091
Identities = 88/128 (68%), Positives = 99/128 (77%)
Frame = +3 / -3
Query: 408 GTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQR 587
GTV+DN VCHP+++DFYMCAHAGMIGTTRPTHYH+L DEIGFS DDLQEL+HSLSYVYQR
Sbjct: 600 GTVIDNAVCHPQSYDFYMCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELIHSLSYVYQR 421
Query: 588 STTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRS 767
STTAISVVAP+ YAHLAA Q+ QF+K D+M PV ELP LH V S
Sbjct: 420 STTAISVVAPVRYAHLAATQISQFLKCDDMSETSSSHGGLTSAGQTPVPELPELHRNVCS 241
Query: 768 SMFFC*AV 791
SMFFC* +
Sbjct: 240 SMFFC*CL 217
Score = 133 bits (286), Expect(2) = 5e-091
Identities = 52/60 (86%), Positives = 55/60 (91%)
Frame = +3 / -2
Query: 231 RDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPPG 410
RDGVSESQFNQVLNIEL QIIEACKFLDE W+PKFT+I+AQKNHHTKFF G PDNVPPG
Sbjct: 859 RDGVSESQFNQVLNIELDQIIEACKFLDESWSPKFTVIVAQKNHHTKFFQDGSPDNVPPG 680
Score = 116 bits (248), Expect(2) = 6e-039
Identities = 57/126 (45%), Positives = 79/126 (62%)
Frame = -1 / +1
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND 606
SA++HRA + R+L R RS +M G L H+I L EL NLS CQ+ + D SN
Sbjct: 223 SAEKHRAADIPV*LRKLGHRGLPSRS*TSMARGCL*HVITLQEL*NLSCCQVSITDRSNY 402
Query: 605 *YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADF 426
Y CCA LVHIR+R++QLL II +A LI ++V++ WP H M THVEI LW+ +
Sbjct: 403 RYCCCASLVHIRQRVNQLL*IIS*KANLI*KNVIMCWPCCSYHPCMCTHVEIIALWVTNS 582
Query: 425 VVHHSS 408
++++ S
Sbjct: 583 IINNGS 600
Score = 72.1 bits (151), Expect(4) = 6e-045
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = -1 / +2
Query: 401 DIIWLSRNEKFSVMILLGNNQRELGIPFLIKKFASLDDLLQLNVQHLIKLTFANTVP 231
+I+W S EKFSVMI L NN ELG P IK+ A L+DL+QL+V+ LI+L AN++P
Sbjct: 689 NIVWRSILEKFSVMIFLCNNNSELG*PAFIKELACLNDLIQLDVEDLIEL*LANSIP 859
Score = 70.7 bits (148), Expect(4) = 6e-045
Identities = 31/43 (72%), Positives = 33/43 (76%)
Frame = -2 / +2
Query: 784 QQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMN 656
QQKNIEL TF C GSS TG PAEV PP LEDVSD+SS+F N
Sbjct: 224 QQKNIELQTFRCSSGSSGTGVCPAEVRPPWLEDVSDMSSHFKN 352
Score = 65.2 bits (136), Expect(2) = 6e-039
Identities = 31/41 (75%), Positives = 31/41 (75%)
Frame = -2 / +3
Query: 409 PGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSRNLQASMI 287
PGGTLSG P KNLV**FF A I VNLG SSRNL ASMI
Sbjct: 681 PGGTLSGDPSWKNLV**FFCATITVNLGDQLSSRNLHASMI 803
Score = 62.5 bits (130), Expect(4) = 6e-045
Identities = 32/42 (76%), Positives = 32/42 (76%)
Frame = -2 / +2
Query: 532 KPISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVP 407
KPISS R * VGLVVPIIPACAHM*KS G QT LS TVP
Sbjct: 476 KPISSKRT**CVGLVVPIIPACAHM*KS*LCG*QTALSITVP 601
Score = 55.6 bits (115), Expect(3) = 1e-021
Identities = 26/57 (45%), Positives = 37/57 (64%)
Frame = +2 / -1
Query: 230 QGRC*RKSV*SGAEH*VATNHRGLQIS**EMESQVHVDYCPEESSH*IFHSWKAR*C 400
+G *R +V S +H +NH G+Q+ **++ +QVH C E+SSH*IF W +R C
Sbjct: 860 KGWS*RVTVQSSPQHRAGSNH*GMQVP**KLVTQVHCYCCTEKSSH*IFPRWISRQC 690
Score = 51.9 bits (107), Expect(3) = 1e-021
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +2 / -2
Query: 569 LLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQSWRAYF 712
+LCVPK+HNS+I CS L + GS S + + +V * V D+L+ WR+ F
Sbjct: 439 VLCVPKKHNSNICSCSCPLCSLGSNSDFTILEV**HVRDILEPWRSNF 296
Score = 33.1 bits (66), Expect(3) = 1e-021
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2 / -2
Query: 431 LPSKELRFLHVCACWNDRDYEANSL 505
L +L FLHVC C +DR+ +AN+L
Sbjct: 577 LSPTKL*FLHVCTCRDDRNNKANTL 503
Score = 32.7 bits (65), Expect(4) = 6e-045
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2 / +2
Query: 616 GATTDMAVVLLWY 578
GATTD+AVVLLWY
Sbjct: 392 GATTDIAVVLLWY 430
>gb|BU835584.1|BU835584 T075G07 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 574
Score = 270 bits (585), Expect(2) = 2e-078
Identities = 106/146 (72%), Positives = 119/146 (81%)
Frame = +3 / +1
Query: 351 QKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIG 530
+KNHHTKFF PG PDNVPPGT++DNKVCHP+N DFY+CAHAGMIGTTRPTHYH+L DE+
Sbjct: 64 RKNHHTKFFQPGSPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVS 243
Query: 531 FSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXX 710
FS DDLQELVHSLSYV QRSTTAISVVAPICYAHLAA Q+GQF+KF++
Sbjct: 244 FSADDLQELVHSLSYVCQRSTTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGGVT 423
Query: 711 XXXXVPVQELPRLHEKVRSSMFFC*A 788
VPV +LPRL EKV +SMFFC*A
Sbjct: 424 SAGAVPVPQLPRLQEKVCNSMFFC*A 501
Score = 188 bits (405), Expect(2) = 3e-050
Identities = 90/145 (62%), Positives = 100/145 (68%)
Frame = -2 / -3
Query: 787 AQQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGAT 608
AQQKN+EL TFSC G+ TGT PA+V PP LE+VSD+SSNF+NWP *Q+GAT
Sbjct: 500 AQQKNMELQTFSCSLGNCGTGTAPADVTPPWLEEVSDVSSNFINWPI*VAARWA*QIGAT 321
Query: 607 TDMAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPIIPACAHM*KSKFFGWQT 428
T+MAVVLLW+ S K SS + W**VGLVVPIIPA A *KS F GWQT
Sbjct: 320 TEMAVVLLWHTYERECTSSCRSSAEKLTSSNKTW**VGLVVPIIPA*AQR*KSLFLGWQT 141
Query: 427 LLSTTVPGGTLSGFPGMKNLV**FF 353
LLS VPGGTLSG PG KNLV FF
Sbjct: 140 LLSMIVPGGTLSGDPGWKNLVWWFF 66
Score = 151 bits (325), Expect = 6e-036
Identities = 73/143 (51%), Positives = 97/143 (67%)
Frame = -1 / -2
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND 606
S KEH +FL+Q RQL DRN++ R PAM G L + +L++LA+LSSCQ+ +AD N
Sbjct: 498 STKEHGIANFLLQPRQLWDRNSSCRCHPAMA*GSLGRVFKLHKLAHLSSCQVGIADWCNY 319
Query: 605 *YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADF 426
G A L +I E MH+ LQII + L+ Q++VVS P SP+H SM T +E+ V WMADF
Sbjct: 318 RDGSRASLAYI*EGMHKFLQIIC*KTNLV*QNMVVSRPCSPNHPSMSTEIEVIVSWMADF 139
Query: 425 VVHHSSWWDIIWLSRNEKFSVMI 357
VV+ + WDII SR EKFSV++
Sbjct: 138 VVNDRTRWDIIRRSRLEKFSVVV 70
Score = 42.8 bits (87), Expect(2) = 2e-078
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 291 IEACKFLDEKWNPKFTLIIAQK 356
IEACKFL E+W+P F +I+AQK
Sbjct: 3 IEACKFLYERWSPTFAVIVAQK 68
Score = 31.3 bits (62), Expect(2) = 3e-050
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -2 / -1
Query: 358 FFWAIINVNLGFHFSSRNLQASM 290
FF A I N+G H S RNLQAS+
Sbjct: 70 FF*ATITANVGDHLS*RNLQASI 2
>gb|CV246013.1|CV246013 WS0259.B21_P22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0259_P22 3', mRNA sequence
Length = 744
Score = 233 bits (503), Expect(2) = 3e-062
Identities = 92/127 (72%), Positives = 104/127 (81%)
Frame = +3 / -2
Query: 408 GTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQR 587
GT++DNKVCHP+N DFY+CAHAGMIGTTRPTHYH+L DE+GFS DDLQELVHSLSYVYQR
Sbjct: 710 GTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQR 531
Query: 588 STTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRS 767
STTAISVVAPICYAHLAA Q+GQF+KF++ VPV +LPRL EKV +
Sbjct: 530 STTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVPQLPRLQEKVCN 351
Query: 768 SMFFC*A 788
SMFFC*A
Sbjct: 350 SMFFC*A 330
Score = 166 bits (357), Expect(2) = 4e-041
Identities = 78/127 (61%), Positives = 87/127 (68%)
Frame = -2 / +1
Query: 787 AQQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGAT 608
AQQKN+EL TFSC G+ TGT PAEV PP LE+VS++SSNF+NWP *Q+GAT
Sbjct: 331 AQQKNMELQTFSCNLGNCGTGTAPAEVTPPWLEEVSEVSSNFINWPI*VAARWA*QIGAT 510
Query: 607 TDMAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPIIPACAHM*KSKFFGWQT 428
T+MAVVLLWY S KP SS + W**VGLVVPIIPA A *KS F GWQT
Sbjct: 511 TEMAVVLLWYTYERECTSSCRSSAEKPTSSNKTW**VGLVVPIIPA*AQR*KSLFLGWQT 690
Query: 427 LLSTTVP 407
LLS VP
Sbjct: 691 LLSMIVP 711
Score = 132 bits (283), Expect = 3e-030
Identities = 63/123 (51%), Positives = 84/123 (68%)
Frame = -1 / +3
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND 606
S KEH +FL+Q RQL DRN++ R P M G LR + +L++LA+LSSCQ+ +AD N
Sbjct: 333 STKEHGIANFLLQPRQLWDRNSSCRGHPTMA*GSLRSIFKLHKLAHLSSCQVGIADWCNY 512
Query: 605 *YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADF 426
G A LV+I E MH+ LQII + L+ Q++VVS P SP+H SM T +E+ V WMADF
Sbjct: 513 RDGSRASLVYI*EGMHKFLQIIC*KTNLV*QNMVVSRPCSPNHPSMSTEIEVIVSWMADF 692
Query: 425 VVH 417
VV+
Sbjct: 693 VVN 701
Score = 26.3 bits (51), Expect(2) = 3e-062
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / -3
Query: 306 FLDEKWNPKFTL 341
FLDEKW+P F +
Sbjct: 742 FLDEKWSPTFVV 707
Score = 22.6 bits (43), Expect(2) = 4e-041
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2 / +3
Query: 334 NLGFHFSSRN 305
N+G HFSSRN
Sbjct: 714 NVGDHFSSRN 743
>gb|CN520738.1|CN520738 GQ0108.B3_L05 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_L05 5', mRNA sequence
Length = 554
Score = 238 bits (515), Expect = 3e-062
Identities = 94/134 (70%), Positives = 105/134 (78%)
Frame = +3 / +2
Query: 390 PDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSL 569
PDNVPPGTV+DN VCHP+++DFYMCAHAGMIGTTRPTHYH+L DEIGFS DDLQEL+HSL
Sbjct: 5 PDNVPPGTVIDNAVCHPQSYDFYMCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELIHSL 184
Query: 570 SYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRL 749
SYVYQRSTTAISVVAP+ YAHLAA Q+ QF+K D+M PV ELP L
Sbjct: 185 SYVYQRSTTAISVVAPVRYAHLAATQISQFLKCDDMSETSSSHGGLTSAGQTPVPELPEL 364
Query: 750 HEKVRSSMFFC*AV 791
H V SSMFFC* +
Sbjct: 365 HRNVCSSMFFC*CL 406
Score = 122 bits (261), Expect = 4e-027
Identities = 59/132 (44%), Positives = 83/132 (62%)
Frame = -1 / -2
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND 606
SA++HRA + R+L R RS +M G L H+I L EL NLS CQ+ + D SN
Sbjct: 400 SAEKHRAADIPV*LRKLGHRGLPSRS*TSMARGCL*HVITLQEL*NLSCCQVSITDRSNY 221
Query: 605 *YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADF 426
Y CCA LVHIR+R++QLL II +A LI ++V++ WP H M THVEI LW+ +
Sbjct: 220 RYCCCASLVHIRQRVNQLL*IIS*KANLI*KNVIMCWPCCSYHPCMCTHVEIIALWVTNS 41
Query: 425 VVHHSSWWDIIW 390
++++ S +I+W
Sbjct: 40 IINNGSRRNIVW 5
Score = 76.7 bits (161), Expect(3) = 4e-033
Identities = 38/48 (79%), Positives = 38/48 (79%)
Frame = -2 / -3
Query: 532 KPISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSG 389
KPISS R * VGLVVPIIPACAHM*KS G QT LS TVPGGTLSG
Sbjct: 147 KPISSKRT**CVGLVVPIIPACAHM*KS*LCG*QTALSITVPGGTLSG 4
Score = 70.7 bits (148), Expect(3) = 4e-033
Identities = 31/43 (72%), Positives = 33/43 (76%)
Frame = -2 / -3
Query: 784 QQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMN 656
QQKNIEL TF C GSS TG PAEV PP LEDVSD+SS+F N
Sbjct: 399 QQKNIELQTFRCSSGSSGTGVCPAEVRPPWLEDVSDMSSHFKN 271
Score = 32.7 bits (65), Expect(3) = 4e-033
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2 / -3
Query: 616 GATTDMAVVLLWY 578
GATTD+AVVLLWY
Sbjct: 231 GATTDIAVVLLWY 193
>gb|BU832929.1|BU832929 T039H07 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 563
Score = 149 bits (319), Expect(2) = 9e-060
Identities = 54/63 (85%), Positives = 60/63 (95%)
Frame = +3 / +1
Query: 390 PDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSL 569
PDNVPPGT++DNKVCHP+N DFY+CAHAGMIGTTRPTHYH+L DE+GFS DDLQELVHSL
Sbjct: 31 PDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSADDLQELVHSL 210
Query: 570 SYV 578
SYV
Sbjct: 211 SYV 219
Score = 106 bits (226), Expect(2) = 1e-040
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = -2 / -3
Query: 787 AQQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGAT 608
AQQKN+EL TFSC G+ TGT PA+V PP LE+VSD+SSNF+NWP *Q+GA
Sbjct: 429 AQQKNMELQTFSCNLGNCGTGTAPADVTPPWLEEVSDVSSNFINWPI*VAARWA*QIGAA 250
Query: 607 TDMAVVLLWY 578
T+MAVVLLWY
Sbjct: 249 TEMAVVLLWY 220
Score = 102 bits (217), Expect(2) = 9e-060
Identities = 43/70 (61%), Positives = 49/70 (70%)
Frame = +3 / +2
Query: 579 YQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEK 758
YQRSTTAISV APICYAHLAA Q+GQF+KF++ VPV +LPRL EK
Sbjct: 221 YQRSTTAISVAAPICYAHLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVPQLPRLQEK 400
Query: 759 VRSSMFFC*A 788
V +SMFFC*A
Sbjct: 401 VCNSMFFC*A 430
Score = 81.3 bits (171), Expect(2) = 1e-040
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = -2 / -1
Query: 532 KPISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNL 368
KP SS + W**VGLVVPIIPA A *KS F GWQTLLS VPGGTLSG ++ L
Sbjct: 173 KPTSSNKTW**VGLVVPIIPA*AQR*KSLFLGWQTLLSMIVPGGTLSGDARLEKL 9
Score = 73.0 bits (153), Expect(2) = 5e-026
Identities = 32/59 (54%), Positives = 42/59 (71%)
Frame = -1 / -3
Query: 569 ERMHQLLQIIRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDII 393
E MH+ LQII + L+ Q++VVS P SP+H SM T +E+ V WMADFVV+ + WDII
Sbjct: 210 EGMHKFLQIIC*KTNLV*QNMVVSRPCSPNHPSMSTEIEVIVSWMADFVVNDRTRWDII 34
Score = 65.2 bits (136), Expect(2) = 5e-026
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = -1 / -2
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND 606
S KEH +FL+Q RQL DRN++ R P M G L + +L++LA+LSSCQ+ +AD +
Sbjct: 427 STKEHGIANFLLQPRQLWDRNSSCRCHPTMA*GSLGRVFKLHKLAHLSSCQVGIADWCSY 248
Query: 605 *YGCCAPLV 579
G A LV
Sbjct: 247 RDGSRASLV 221
>gb|CN524305.1|CN524305 GQ015M13.T3_E09 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_E09 5', mRNA sequence
Length = 849
Score = 134 bits (288), Expect(2) = 3e-049
Identities = 52/101 (51%), Positives = 69/101 (68%)
Frame = +3 / +3
Query: 363 HTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPD 542
H K + K N+ PGTVVD K+CHP FDFY+ +HAG+ GT+RPTHYH+L DE F+ D
Sbjct: 243 HNKRDLTDKSGNILPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFTAD 422
Query: 543 DLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIK 665
LQ L ++L Y Y R T ++S+V P YAHLAA + +I+
Sbjct: 423 GLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIE 545
Score = 81.3 bits (171), Expect(2) = 3e-049
Identities = 32/64 (50%), Positives = 45/64 (70%)
Frame = +3 / +3
Query: 186 YTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHH 365
+ S +KP ++I +RDGVSE QF+QVL E+Q I EAC L+E + P+ T ++ QK HH
Sbjct: 42 FRRSTGQKPHRIIFYRDGVSEGQFSQVLLHEMQAIREACGTLEEGYCPRVTFVVVQKRHH 221
Query: 366 TKFF 377
T+FF
Sbjct: 222 TRFF 233
>gb|CN518723.1|CN518723 GQ0104.B3_E10 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_E10 5', mRNA sequence
Length = 695
Score = 194 bits (419), Expect = 6e-049
Identities = 79/113 (69%), Positives = 88/113 (77%)
Frame = +3 / +1
Query: 450 DFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYA 629
DFY+CAHAGM TRPTHYH+L DE+GFS DDLQELVHSLSYVYQRSTTAISVVAPICYA
Sbjct: 1 DFYLCAHAGMXXXTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQRSTTAISVVAPICYA 180
Query: 630 HLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC*A 788
HLAA Q+GQF+KF++ VPV +LPRL EKV +SMFFC*A
Sbjct: 181 HLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVPQLPRLQEKVCNSMFFC*A 339
Score = 134 bits (287), Expect = 1e-030
Identities = 65/112 (58%), Positives = 74/112 (66%)
Frame = -2 / -1
Query: 787 AQQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGAT 608
AQQKN+EL TFSC G+ TGT PAEV PP LE+VS++SSNF+NWP *Q+GAT
Sbjct: 338 AQQKNMELQTFSCNLGNCGTGTAPAEVTPPWLEEVSEVSSNFINWPI*VAARWA*QIGAT 159
Query: 607 TDMAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPIIPACAHM*K 452
T+MAVVLLWY S KP SS + W**VGLV IIPA A *K
Sbjct: 158 TEMAVVLLWYTYERECTSSCRSSAEKPTSSNKTW**VGLVXXIIPA*AQR*K 3
Score = 107 bits (228), Expect = 1e-022
Identities = 53/112 (47%), Positives = 72/112 (64%)
Frame = -1 / -3
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND 606
S KEH +FL+Q RQL DRN++ R P M G LR + +L++LA+LSSCQ+ +AD N
Sbjct: 336 STKEHGIANFLLQPRQLWDRNSSCRGHPTMA*GSLRSIFKLHKLAHLSSCQVGIADWCNY 157
Query: 605 *YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVVVSWPRSPDHSSMRTHVEI 450
G A LV+I E MH+ LQII + L+ Q++VVS P H SM T +E+
Sbjct: 156 RDGSRASLVYI*EGMHKFLQIIC*KTNLV*QNMVVSRPCXXXHPSMSTEIEV 1
>gb|BU894173.1|BU894173 X003H07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 618
Score = 132 bits (282), Expect(2) = 4e-046
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = +3 / +1
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 256 NDHRDRSAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 435
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 436 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 540
Score = 73.5 bits (154), Expect(2) = 4e-046
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = +3 / +1
Query: 204 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 79 QKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 252
>gb|BU812023.1|BU812023 UL91TD02 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 616
Score = 132 bits (282), Expect(2) = 4e-046
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = +3 / +2
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 212 NDHRDRSAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 391
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 392 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 496
Score = 73.5 bits (154), Expect(2) = 4e-046
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = +3 / +2
Query: 204 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 35 QKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 208
>gb|BI127370.1|BI127370 G059P39Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 502
Score = 132 bits (282), Expect(2) = 6e-046
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = +3 / +2
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 176 NDHRDRSAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 355
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 356 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 460
Score = 73.0 bits (153), Expect(2) = 6e-046
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +3 / +2
Query: 207 KPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 2 KPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 172
>gb|CV231236.1|CV231236 WS0193.B21_O22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0193_O22 3', mRNA sequence
Length = 875
Score = 131 bits (281), Expect(2) = 1e-045
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = +3 / -1
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 680 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 501
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 500 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 396
Score = 72.5 bits (152), Expect(2) = 1e-045
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = +3 / -1
Query: 204 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 857 QKPQRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 684
>gb|BU880106.1|BU880106 UM41TE06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 610
Score = 129 bits (276), Expect(2) = 6e-045
Identities = 47/81 (58%), Positives = 62/81 (76%)
Frame = +3 / +3
Query: 405 PGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQ 584
PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++L Y Y
Sbjct: 363 PGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYA 542
Query: 585 RSTTAISVVAPICYAHLAAAQ 647
R T ++S+V P YAHLAA++
Sbjct: 543 RCTRSVSIVPPAYYAHLAASR 605
Score = 72.5 bits (152), Expect(2) = 6e-045
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = +3 / +2
Query: 204 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 140 QKPQRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 313
>gb|BI138167.1|BI138167 F100P23Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 514
Score = 132 bits (282), Expect(2) = 3e-044
Identities = 52/62 (83%), Positives = 58/62 (93%)
Frame = +3 / +3
Query: 141 EAEDDGLIRECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEK 320
E ED+G+IRE L+DFY +SGKRKPDQ+IIFRDGVSESQFNQVLNIEL QIIEACKFLDEK
Sbjct: 327 ETEDEGIIRELLLDFYVTSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEK 506
Query: 321 WN 326
W+
Sbjct: 507 WS 512
Score = 71.6 bits (150), Expect(2) = 3e-021
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = -2 / -1
Query: 133 LNNESIISIFGDWVRTDALYFEIRGHSRELTTAATDGTSECPGD 2
LNNESIIS FGD VRT A EI+GH ELTTAA +GTS+CPG+
Sbjct: 316 LNNESIISSFGDCVRTHAR*REIKGHCLELTTAAIEGTSDCPGE 185
Score = 67.5 bits (141), Expect(2) = 3e-044
Identities = 28/51 (54%), Positives = 32/51 (62%)
Frame = +3 / +3
Query: 3 SPGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDD 155
SPG R+WPLIS+YRA VRTQSPK+EMIDSLFK +D
Sbjct: 186 SPGQSDVPSIAAVVSSRQWPLISRYRACVRTQSPKLEMIDSLFKRVSETED 338
Score = 50.6 bits (104), Expect(2) = 3e-021
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = -1 / -3
Query: 323 PFLIKKFASLDDLLQLNVQHLIKLTFANTVPEYDNLVRLSLPRTGVEVNQTLPDQTII 150
P LIKK A L+ L+Q ++Q LI+L F + V +YD+L+ + ++V Q LP+ + I
Sbjct: 509 PLLIKKLARLNYLIQFDIQDLIEL*FTDPVSKYDDLIGFPFS*SHIKV*QKLPNYSFI 336
>gb|CV269504.1|CV269504 WS0208.B21_G24 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0208_G24 3', mRNA sequence
Length = 719
Score = 178 bits (384), Expect = 4e-044
Identities = 74/104 (71%), Positives = 82/104 (78%)
Frame = +3 / -3
Query: 477 MIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQ 656
MIGTTRPTHYH+L DE+GFS DDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA Q+GQ
Sbjct: 717 MIGTTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQ 538
Query: 657 FIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC*A 788
F+KF++ VPV +LPRL EKV +SMFFC*A
Sbjct: 537 FMKFEDTSETSSSHGGVTSAGAVPVPQLPRLQEKVCNSMFFC*A 406
Score = 135 bits (289), Expect = 5e-031
Identities = 63/104 (60%), Positives = 71/104 (68%)
Frame = -2 / +2
Query: 787 AQQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGAT 608
AQQKN+EL TFSC G+ TGT PAEV PP LE+VS++SSNF+NWP *Q+GAT
Sbjct: 407 AQQKNMELQTFSCNLGNCGTGTAPAEVTPPWLEEVSEVSSNFINWPI*VAARWA*QIGAT 586
Query: 607 TDMAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPII 476
TDMAVVLLWY S KP SS + W**VGLVVPII
Sbjct: 587 TDMAVVLLWYTYERECTSSCRSSAEKPTSSNKTW**VGLVVPII 718
Score = 108 bits (230), Expect = 7e-023
Identities = 52/103 (50%), Positives = 70/103 (67%)
Frame = -1 / +1
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND 606
S KEH +FL+Q RQL DRN++ R P M G LR + +L++LA+LSSCQ+ +AD N
Sbjct: 409 STKEHGIANFLLQPRQLWDRNSSCRGHPTMA*GSLRSIFKLHKLAHLSSCQVGIADWCNY 588
Query: 605 *YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVVVSWPRSPDH 477
YG A LV+I E MH+ LQII + L+ Q++VVS P SP+H
Sbjct: 589 RYGSRASLVYI*EGMHKFLQIIC*KTNLV*QNMVVSRPCSPNH 717
>gb|CV267224.1|CV267224 WS02031.B21_C18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02031_C18 3', mRNA sequence
Length = 960
Score = 131 bits (281), Expect(2) = 5e-043
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = +3 / -3
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 772 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 593
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 592 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 488
Score = 63.8 bits (133), Expect(2) = 5e-043
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +3 / -3
Query: 228 FRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
+RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 925 YRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 776
>gb|CK090838.1|CK090838 F027P19.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F027P19 3', mRNA sequence
Length = 680
Score = 169 bits (363), Expect = 3e-041
Identities = 67/103 (65%), Positives = 78/103 (75%)
Frame = +3 / -2
Query: 477 MIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQ 656
++GT+RP HYH+L DEIGFSPD+L LVHSLSYVYQRSTTA+S+VAPICYAHLAAAQ+GQ
Sbjct: 658 LLGTSRPAHYHVLLDEIGFSPDELLNLVHSLSYVYQRSTTAVSIVAPICYAHLAAAQIGQ 479
Query: 657 FIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 785
F+KF++ PV ELPRLHE V SMFFC*
Sbjct: 478 FMKFEDFFEPFSGQRSMTSVGSTPVPELPRLHENVEGSMFFC* 350
>gb|DV464201.1|DV464201 MTUNUL1.P24.D07 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 867
Score = 97.3 bits (206), Expect(3) = 2e-040
Identities = 36/67 (53%), Positives = 46/67 (68%)
Frame = +3 / +1
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 667 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 846
Query: 537 PDDLQEL 557
D LQ L
Sbjct: 847 ADGLQSL 867
Score = 73.5 bits (154), Expect(3) = 2e-040
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = +3 / +1
Query: 204 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 490 QKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 663
Score = 34.1 bits (68), Expect(3) = 2e-040
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3 / +1
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFK 134
PG ++WP ++KY V Q+ + E+I L+K
Sbjct: 280 PGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYK 408
>gb|BU894661.1|BU894661 X012H09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 814
Score = 97.3 bits (206), Expect(3) = 1e-039
Identities = 36/67 (53%), Positives = 46/67 (68%)
Frame = +3 / +2
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 581 NDHRDRSAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENMFT 760
Query: 537 PDDLQEL 557
D LQ L
Sbjct: 761 ADGLQSL 781
Score = 70.7 bits (148), Expect(3) = 1e-039
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +3 / +1
Query: 204 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTK 371
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+
Sbjct: 403 QKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTR 570
Score = 34.1 bits (68), Expect(3) = 1e-039
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3 / +1
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFK 134
PG ++WP ++KY V Q+ + E+I L+K
Sbjct: 193 PGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYK 321
>gb|CK097248.1|CK097248 UB44DPH02.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB44DPH02 3', mRNA sequence
Length = 762
Score = 132 bits (282), Expect(4) = 9e-039
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = +3 / -2
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 545 NDHRDRTAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 366
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 365 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 261
Score = 34.5 bits (69), Expect(4) = 9e-039
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3 / -2
Query: 294 EACKFLDEKWNPKFTLIIAQKNHHTKFF 377
E FL+ + P T ++ QK HHT+ F
Sbjct: 632 EGMCFLEPNYQPPVTFVVVQKRHHTRLF 549
Score = 28.6 bits (56), Expect(4) = 9e-039
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3 / -1
Query: 195 SGKRKPDQVIIFRDGVSESQFNQVL 269
S + + + +RDGVSE QF QVL
Sbjct: 729 SHRAEASENYFYRDGVSEGQFYQVL 655
Score = 26.7 bits (52), Expect(4) = 9e-039
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / -2
Query: 729 VQELPRLHEKVRSSMFFC*AVVLLFWWMV 815
V+ LP L E V+ MF+C* +W+V
Sbjct: 131 VRPLPALKENVKRVMFYC*DSRHPHFWIV 45
>gb|DT516220.1|DT516220 WS02430.B21_L23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_L23 3', mRNA sequence
Length = 910
Score = 131 bits (281), Expect(2) = 2e-037
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = +3 / -3
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 785 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 606
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 605 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 501
Score = 44.6 bits (91), Expect(2) = 2e-037
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3 / -3
Query: 261 QVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 905 QVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 789
>gb|DN488212.1|DN488212 R041G07.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R041G07 3', mRNA sequence
Length = 811
Score = 130 bits (278), Expect(2) = 2e-036
Identities = 50/93 (53%), Positives = 65/93 (69%)
Frame = +3 / -3
Query: 387 KPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHS 566
K N+ PGTVVD +CHP FDFY+ +HAG+ GT+RPTHYH+L DE FS D LQ L ++
Sbjct: 653 KSGNILPGTVVDTTICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFSSDGLQTLTNN 474
Query: 567 LSYVYQRSTTAISVVAPICYAHLAAAQVGQFIK 665
L Y Y R T ++S+V P YAHLAA + +I+
Sbjct: 473 LCYTYARCTRSVSIVPPAYYAHLAAFRARYYIE 375
Score = 43.2 bits (88), Expect(2) = 2e-036
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3 / -3
Query: 279 LQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
+Q I +AC L E + P+ T ++ QK HHT+FF
Sbjct: 785 MQAIRQACGSLQEGYCPRVTFVVVQKRHHTRFF 687
>gb|AJ777572.1|AJ777572 AJ777572 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400030C07F1, mRNA sequence
Length = 687
Score = 111 bits (236), Expect(3) = 2e-035
Identities = 39/71 (54%), Positives = 55/71 (77%)
Frame = +3 / +2
Query: 393 DNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLS 572
+N+PPGTVVD + HPK FDFY+C+H G+ GT++PTHYH+L DE F+ D+LQ+LV++L
Sbjct: 473 ENIPPGTVVDTVITHPKEFDFYLCSHWGVKGTSKPTHYHVLWDENQFTSDELQKLVYNLC 652
Query: 573 YVYQRSTTAIS 605
Y + R T +S
Sbjct: 653 YTFVRCTKPVS 685
Score = 49.6 bits (102), Expect(3) = 2e-035
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +3 / +2
Query: 210 PDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKF 374
P ++I FRDGVSE+QF +VL ELQ I EAC P ++ +++H F
Sbjct: 263 PKRIIFFRDGVSETQFYKVLKEELQAIREACSRFPGYRPPITFAVVQKRHHTRLF 427
Score = 27.2 bits (53), Expect(3) = 2e-035
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 57 WPLISKYRASVRTQSPKMEMIDSL 128
WP +KY + +R+Q+ + E+I L
Sbjct: 137 WPAANKYVSRMRSQTHRQEIIQDL 208
>gb|CV274847.1|CV274847 WS0174.B21.1_J06 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0174_J06 3', mRNA sequence
Length = 849
Score = 131 bits (281), Expect(2) = 7e-035
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = +3 / -2
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 761 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 582
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 581 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 477
Score = 36.3 bits (73), Expect(2) = 7e-035
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3 / -2
Query: 294 EACKFLDEKWNPKFTLIIAQKNHHTKFF 377
+AC L+ + P T ++ QK HHT+ F
Sbjct: 848 KACASLEPNYQPPVTFVVVQKRHHTRLF 765
>gb|CA931177.1|CA931177 MTU2TA.P3.D04 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 254
Score = 138 bits (296), Expect(2) = 4e-034
Identities = 54/64 (84%), Positives = 59/64 (92%)
Frame = +3 / -1
Query: 183 FYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNH 362
FY +SGKRKPDQ+IIFRDGVSESQFNQVLNIEL QIIEACKFL EKW+P F +I+AQKNH
Sbjct: 224 FYVTSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLGEKWSPTFVVIVAQKNH 45
Query: 363 HTKF 374
HTKF
Sbjct: 44 HTKF 33
Score = 27.2 bits (53), Expect(2) = 4e-034
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / -3
Query: 375 FIPGKPDNVPP 407
F PG PDNVPP
Sbjct: 33 FQPGSPDNVPP 1
>gb|BU818866.1|BU818866 UA35CPF05 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 503
Score = 131 bits (280), Expect(3) = 9e-034
Identities = 51/101 (50%), Positives = 68/101 (67%)
Frame = +3 / +2
Query: 363 HTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPD 542
H K + N+ PGTVVD K+CHP FDFY+ +HAG+ GT+RPTHYH+L DE F+ D
Sbjct: 56 HNKRDQTDRSGNILPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFTAD 235
Query: 543 DLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIK 665
LQ L ++L Y Y R T ++S+V P YAHLAA + +I+
Sbjct: 236 GLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIE 358
Score = 28.1 bits (55), Expect(3) = 9e-034
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 339 LIIAQKNHHTKFF 377
L++ QK HHT+FF
Sbjct: 8 LVVVQKRHHTRFF 46
Score = 23.1 bits (44), Expect(3) = 9e-034
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3 / +2
Query: 723 VPVQELPRLHEKVRSSMFFC*AVVLLFWW 809
V + LP + E V+ M +C* +F W
Sbjct: 404 VEARSLPVVKENVKDVMSYC*YSRPIFLW 490
>gb|DT480982.1|DT480982 WS02530.BR_I12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_I12 5', mRNA sequence
Length = 733
Score = 143 bits (307), Expect = 2e-033
Identities = 56/131 (42%), Positives = 81/131 (61%)
Frame = +3 / +3
Query: 393 DNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLS 572
+N+PPGTVVD + HP+ FDFY+C+H G+ GT+RPTHYH+L DE F+ D+LQ+LV++L
Sbjct: 18 ENIPPGTVVDTVITHPREFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLC 197
Query: 573 YVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLH 752
Y + R T +S+V P YAHLAA + +++ E LP+L
Sbjct: 198 YTFVRCTKPVSLVPPAYYAHLAAYRGRLYLERSECMASIRNASTISRAAPPKAAPLPKLS 377
Query: 753 EKVRSSMFFC* 785
E ++ MF+C*
Sbjct: 378 ENLKKLMFYC* 410
>gb|DT486279.1|DT486279 WS02530.B21_I12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_I12 3', mRNA sequence
Length = 733
Score = 143 bits (307), Expect = 2e-033
Identities = 56/131 (42%), Positives = 81/131 (61%)
Frame = +3 / -3
Query: 393 DNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLS 572
+N+PPGTVVD + HP+ FDFY+C+H G+ GT+RPTHYH+L DE F+ D+LQ+LV++L
Sbjct: 716 ENIPPGTVVDTVITHPREFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLC 537
Query: 573 YVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLH 752
Y + R T +S+V P YAHLAA + +++ E LP+L
Sbjct: 536 YTFVRCTKPVSLVPPAYYAHLAAYRGRLYLERSECMASIRNASTISRAAPPKAAPLPKLS 357
Query: 753 EKVRSSMFFC* 785
E ++ MF+C*
Sbjct: 356 ENLKKLMFYC* 324
>gb|DV464515.1|DV464515 MTUNUL1.P28.E03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 830
Score = 131 bits (281), Expect(2) = 2e-033
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = +3 / -3
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 756 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 577
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 576 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 472
Score = 31.3 bits (62), Expect(2) = 2e-033
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3 / -3
Query: 309 LDEKWNPKFTLIIAQKNHHTKFF 377
L+ + P T ++ QK HHT+ F
Sbjct: 828 LEPNYQPPVTFVVVQKRHHTRLF 760
>gb|AJ772440.1|AJ772440 AJ772440 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700006E12F1, mRNA sequence
Length = 418
Score = 134 bits (288), Expect = 7e-031
Identities = 51/95 (53%), Positives = 66/95 (69%)
Frame = +3 / +2
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N+H K N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 32 NNHRDRTSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 211
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
D +Q L ++L Y Y R T ++SVV P YAHLAA
Sbjct: 212 ADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAA 316
>gb|BU898140.1|BU898140 X075D09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 623
Score = 130 bits (278), Expect(2) = 3e-030
Identities = 49/95 (51%), Positives = 64/95 (67%)
Frame = +3 / +1
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 49 NDHRDRSAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 228
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
D LQ L ++L Y Y R T ++S+V P YAHL A
Sbjct: 229 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLVA 333
Score = 22.1 bits (42), Expect(2) = 3e-030
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3 / +2
Query: 336 TLIIAQKNHHT 368
T ++ QK HHT
Sbjct: 5 TFVVVQKRHHT 37
>gb|CX171314.1|CX171314 G11_69-94_13.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 555
Score = 132 bits (282), Expect = 5e-030
Identities = 50/97 (51%), Positives = 66/97 (68%)
Frame = +3 / +3
Query: 351 QKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIG 530
+ N H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE
Sbjct: 6 EANDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENK 185
Query: 531 FSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
F+ D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 186 FTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 296
>gb|BU894478.1|BU894478 X010A02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 650
Score = 131 bits (280), Expect = 9e-030
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +3 / +3
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++L Y
Sbjct: 27 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 206
Query: 576 VYQRSTTAISVVAPICYAHLAA 641
Y R T ++S+V P YAHLAA
Sbjct: 207 TYARCTRSVSIVPPAYYAHLAA 272
>gb|CK096964.1|CK096964 UB34DPA12.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB34DPA12 3', mRNA sequence
Length = 646
Score = 130 bits (279), Expect = 1e-029
Identities = 48/85 (56%), Positives = 62/85 (72%)
Frame = +3 / -2
Query: 387 KPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHS 566
K N+ PG VVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D +Q L ++
Sbjct: 618 KSGNILPGAVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNN 439
Query: 567 LSYVYQRSTTAISVVAPICYAHLAA 641
L Y Y R T ++SVV P YAHLAA
Sbjct: 438 LCYTYARCTRSVSVVPPAYYAHLAA 364
>gb|BU819274.1|BU819274 UA41BPG08 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 627
Score = 130 bits (278), Expect = 2e-029
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +3 / +2
Query: 405 PGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQ 584
PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D +Q L ++L Y Y
Sbjct: 2 PGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYA 181
Query: 585 RSTTAISVVAPICYAHLAAAQV 650
R T ++SVV P YAHLAA +V
Sbjct: 182 RCTRSVSVVPPAYYAHLAAFRV 247
>gb|BU896276.1|BU896276 X038C04 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 679
Score = 128 bits (274), Expect = 6e-029
Identities = 47/79 (59%), Positives = 60/79 (75%)
Frame = +3 / +2
Query: 405 PGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQ 584
PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++L Y Y
Sbjct: 23 PGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYA 202
Query: 585 RSTTAISVVAPICYAHLAA 641
R T ++S+V P YAHLAA
Sbjct: 203 RCTRSVSIVPPAYYAHLAA 259
>gb|BU896297.1|BU896297 X038E11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 666
Score = 128 bits (274), Expect = 6e-029
Identities = 47/79 (59%), Positives = 60/79 (75%)
Frame = +3 / +2
Query: 405 PGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQ 584
PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++L Y Y
Sbjct: 23 PGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYA 202
Query: 585 RSTTAISVVAPICYAHLAA 641
R T ++S+V P YAHLAA
Sbjct: 203 RCTRSVSIVPPAYYAHLAA 259
>gb|DT488774.1|DT488774 WS02537.B21_G04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02537_G04 3', mRNA sequence
Length = 635
Score = 122 bits (260), Expect = 5e-027
Identities = 52/78 (66%), Positives = 58/78 (74%)
Frame = +3 / -2
Query: 555 LVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQ 734
LVHSLSYVYQRSTTAISVVAPICYAHLAA Q+GQF+KF++ VPV
Sbjct: 634 LVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVP 455
Query: 735 ELPRLHEKVRSSMFFC*A 788
+LPRL EKV +SMFFC*A
Sbjct: 454 QLPRLQEKVCNSMFFC*A 401
Score = 111 bits (238), Expect = 6e-024
Identities = 49/80 (61%), Positives = 58/80 (72%)
Frame = -2 / +3
Query: 817 FTIHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXX 638
F +H+ AQQKNIEL TFSC G+ TGT PAEV PP LE+VS++SSNF+NWP
Sbjct: 372 FYLHRVKG*HAQQKNIELQTFSCNLGNCGTGTAPAEVTPPWLEEVSEVSSNFINWPI*VA 551
Query: 637 XXXX*QMGATTDMAVVLLWY 578
*Q+GATT+MAVVLLWY
Sbjct: 552 ARWA*QIGATTEMAVVLLWY 611
>gb|CK100043.1|CK100043 B006P29.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B006P29 5', mRNA sequence
Length = 475
Score = 119 bits (255), Expect = 3e-026
Identities = 43/77 (55%), Positives = 57/77 (74%)
Frame = +3 / +1
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D +Q L ++L Y
Sbjct: 211 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLWY 390
Query: 576 VYQRSTTAISVVAPICY 626
Y R T ++SVV P Y
Sbjct: 391 TYARCTRSVSVVPPAYY 441
>gb|BU891188.1|BU891188 P047A12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 494
Score = 111 bits (237), Expect(2) = 2e-025
Identities = 40/73 (54%), Positives = 54/73 (73%)
Frame = +3 / +3
Query: 423 NKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAI 602
+K+CHP F+FY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++L Y Y R T ++
Sbjct: 3 SKICHPTEFNFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSV 182
Query: 603 SVVAPICYAHLAA 641
S+V P YAHLAA
Sbjct: 183 SIVPPAYYAHLAA 221
Score = 26.7 bits (52), Expect(2) = 2e-025
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 729 VQELPRLHEKVRSSMFFC*AVVLLFWWMV 815
V+ LP L E V+ MF+C* +W+V
Sbjct: 351 VRPLPALKENVKRVMFYC*DSRHPHFWIV 437
>gb|CV227387.1|CV227387 WS0167.B21_A17 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_A17
3', mRNA sequence
Length = 709
Score = 113 bits (241), Expect = 2e-024
Identities = 41/72 (56%), Positives = 53/72 (73%)
Frame = +3 / +3
Query: 426 KVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAIS 605
K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++L Y Y R T ++S
Sbjct: 3 KICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVS 182
Query: 606 VVAPICYAHLAA 641
+V P YAHLAA
Sbjct: 183 IVPPAYYAHLAA 218
>gb|CK099351.1|CK099351 A063P66.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A063P66 5', mRNA sequence
Length = 546
Score = 99.1 bits (210), Expect(2) = 4e-024
Identities = 37/65 (56%), Positives = 48/65 (73%)
Frame = +3 / +1
Query: 447 FDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICY 626
FDFY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++L Y Y R T ++S+V P Y
Sbjct: 55 FDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYY 234
Query: 627 AHLAA 641
AHLAA
Sbjct: 235 AHLAA 249
Score = 32.7 bits (65), Expect(2) = 4e-024
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3 / +2
Query: 396 NVPPGTVVDNKVCHPKN 446
N+ PGTVVD+K+CH N
Sbjct: 5 NILPGTVVDSKICHLLN 55
>gb|CK103023.1|CK103023 G100P25.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G100P25 5', mRNA sequence
Length = 463
Score = 67.5 bits (141), Expect(3) = 1e-022
Identities = 28/51 (54%), Positives = 32/51 (62%)
Frame = +3 / +2
Query: 3 SPGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDD 155
SPG R+WPLIS+YRA VRTQSPK+EMIDSLFK +D
Sbjct: 197 SPGQSDVPSIAAVVSSRQWPLISRYRACVRTQSPKLEMIDSLFKRVSETED 349
Score = 42.8 bits (87), Expect(3) = 1e-022
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 183 FYTSSGKRKPDQVIIFRDGVS 245
F +SGKRKPDQ+IIFRDGVS
Sbjct: 381 FM*TSGKRKPDQIIIFRDGVS 443
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3 / +2
Query: 141 EAEDDGLIRECLIDFYTSSGKRK 209
E ED+G+IRE L+DFY K++
Sbjct: 338 ETEDEGIIRELLLDFYVDFRKKE 406
>gb|DN484863.1|DN484863 K029P19.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K029P19 3', mRNA sequence
Length = 573
Score = 92.7 bits (196), Expect(2) = 3e-022
Identities = 39/69 (56%), Positives = 47/69 (68%)
Frame = +3 / -2
Query: 582 QRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKV 761
+ + TAISVVAPICYAHLAA Q+GQF+KF++ VPV +LPRL EKV
Sbjct: 545 KEAPTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVPQLPRLQEKV 366
Query: 762 RSSMFFC*A 788
+SMFFC*A
Sbjct: 365 CNSMFFC*A 339
Score = 32.7 bits (65), Expect(2) = 3e-022
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / -1
Query: 555 LVHSLSYVYQRST 593
LVHSLSYVYQRST
Sbjct: 573 LVHSLSYVYQRST 535
>gb|CK117051.1|CK117051 B024P66 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B024P66 5', mRNA sequence
Length = 276
Score = 98.7 bits (209), Expect(2) = 6e-022
Identities = 36/70 (51%), Positives = 48/70 (68%)
Frame = +3 / +3
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 66 NDHRDRTAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 245
Query: 537 PDDLQELVHS 566
D LQ L ++
Sbjct: 246 ADGLQSLTNN 275
Score = 25.8 bits (50), Expect(2) = 6e-022
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 336 TLIIAQKNHHTKFF 377
T ++ QK HHT+ F
Sbjct: 21 TFVVVQKRHHTRLF 62
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 523,435,807
Number of Sequences: 369679
Number of extensions: 7447129
Number of successful extensions: 42733
Number of sequences better than 1.0e-020: 54
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 13932661389
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)