TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404801.2.1
(867 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT469311.1|DT469311 WS01917.C21_G04 PT-DX-N-A-10 Populus... 274 7e-073
gb|BU835584.1|BU835584 T075G07 Populus apical shoot cDNA li... 265 2e-070
gb|CV240638.1|CV240638 WS0251.B21_O23 PT-MB-N-A-15 Populus ... 221 5e-069
gb|CA823228.1|CA823228 R22G04 two-month-old roots from clon... 235 4e-061
gb|CN520738.1|CN520738 GQ0108.B3_L05 GQ010 Populus trichoca... 232 3e-060
gb|CV246013.1|CV246013 WS0259.B21_P22 PT-MB-N-A-15 Populus ... 232 3e-060
gb|BU832929.1|BU832929 T039H07 Populus apical shoot cDNA li... 144 2e-058
gb|CN518723.1|CN518723 GQ0104.B3_E10 GQ010 Populus trichoca... 192 3e-048
gb|CV269504.1|CV269504 WS0208.B21_G24 PTxN-IB-N-A-11 Populu... 177 9e-044
gb|CK090838.1|CK090838 F027P19.3pR Populus flower cDNA libr... 170 1e-041
gb|CN524305.1|CN524305 GQ015M13.T3_E09 GQ015 Populus tricho... 132 7e-034
gb|DT480982.1|DT480982 WS02530.BR_I12 PT-MB-N-A-15 Populus ... 142 4e-033
gb|DT486279.1|DT486279 WS02530.B21_I12 PT-MB-N-A-15 Populus... 142 4e-033
gb|DN488212.1|DN488212 R041G07.3pR Populus root cDNA librar... 126 3e-032
gb|CK097248.1|CK097248 UB44DPH02.3pR Populus active cambium... 129 8e-032
gb|BU812023.1|BU812023 UL91TD02 Populus leaf cDNA library P... 129 8e-032
gb|BU894173.1|BU894173 X003H07 Populus wood cDNA library Po... 129 8e-032
gb|BI127370.1|BI127370 G059P39Y Populus cambium cDNA librar... 129 8e-032
gb|CV267224.1|CV267224 WS02031.B21_C18 PTxN-IB-N-A-11 Popul... 128 1e-031
gb|DT516220.1|DT516220 WS02430.B21_L23 PTxD-ICC-N-A-14 Popu... 128 1e-031
gb|CV231236.1|CV231236 WS0193.B21_O22 PT-DX-N-A-10 Populus ... 128 1e-031
gb|CV274847.1|CV274847 WS0174.B21.1_J06 PTxD-NR-A-8 Populus... 128 1e-031
gb|DV464515.1|DV464515 MTUNUL1.P28.E03 NUL Populus fremonti... 128 1e-031
gb|BU818866.1|BU818866 UA35CPF05 Populus tremula cambium cD... 128 2e-031
gb|BU880106.1|BU880106 UM41TE06 Populus flower cDNA library... 127 4e-031
gb|AJ772440.1|AJ772440 AJ772440 Populus euphratica shoot in... 132 4e-030
gb|BU898140.1|BU898140 X075D09 Populus wood cDNA library Po... 127 2e-029
gb|CX171314.1|CX171314 G11_69-94_13.ab1 leaf inoculated wit... 129 3e-029
gb|BU894478.1|BU894478 X010A02 Populus wood cDNA library Po... 128 5e-029
gb|BU819274.1|BU819274 UA41BPG08 Populus tremula cambium cD... 127 7e-029
gb|CK096964.1|CK096964 UB34DPA12.3pR Populus active cambium... 127 7e-029
gb|BU896276.1|BU896276 X038C04 Populus wood cDNA library Po... 126 2e-028
gb|BU896297.1|BU896297 X038E11 Populus wood cDNA library Po... 126 2e-028
gb|DT488774.1|DT488774 WS02537.B21_G04 PT-MB-N-A-15 Populus... 126 2e-028
gb|CK100043.1|CK100043 B006P29.5pR Hybrid aspen plasmid lib... 116 1e-025
gb|DN484863.1|DN484863 K029P19.3pR Populus apical shoot cDN... 114 7e-025
gb|CV227387.1|CV227387 WS0167.B21_A17 PT-DX-A-7 Populus tri... 114 9e-025
gb|AJ777572.1|AJ777572 AJ777572 Populus euphratica root 3-6... 106 1e-024
gb|BU891188.1|BU891188 P047A12 Populus petioles cDNA librar... 112 3e-024
gb|CK099351.1|CK099351 A063P66.5pR Hybrid aspen plasmid lib... 100 2e-023
gb|DV464201.1|DV464201 MTUNUL1.P24.D07 NUL Populus fremonti... 95 2e-021
gb|CK117051.1|CK117051 B024P66 Hybrid aspen plasmid library... 96 3e-021
gb|CA924736.1|CA924736 MTU7CL.P9.D08 Aspen leaf cDNA Librar... 100 9e-021
>gb|DT469311.1|DT469311 WS01917.C21_G04 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01917_G04 3', mRNA sequence
Length = 809
Score = 274 bits (592), Expect = 7e-073
Identities = 107/154 (69%), Positives = 122/154 (79%)
Frame = +1 / -3
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTH 297
+PKFT+I+AQKNHHTKFF G PDNVP GTV+DN VCHP+++DFYMC+HAGMIGTTRPTH
Sbjct: 669 SPKFTVIVAQKNHHTKFFQDGSPDNVPPGTVIDNAVCHPQSYDFYMCAHAGMIGTTRPTH 490
Query: 298 YHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXX 477
YH+L DEIGF+ DDLQEL+HSLSYVYQRSTTAISVVAP+ YAHLAA Q+ QF+K D+M
Sbjct: 489 YHVLLDEIGFSADDLQELIHSLSYVYQRSTTAISVVAPVRYAHLAATQISQFLKCDDMSE 310
Query: 478 XXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 579
PV ELP LH V SSMFFC*
Sbjct: 309 TSSSHGGLTSAGQTPVPELPELHRNVCSSMFFC* 208
Score = 140 bits (300), Expect = 1e-032
Identities = 69/153 (45%), Positives = 93/153 (60%)
Frame = -1 / +1
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN 400
SAE+H A + +L R R MAR L H++ L EL NL C+V + D SN
Sbjct: 208 SAEKHRAADIPV*LRKLGHRGLPSRS*TSMARGCL*HVITLQEL*NLSCCQVSITDRSNY 387
Query: 399 *YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDF 220
Y CCA LVH+R+RV+QLL +I +A L+ ++VI+ WP H M THVEI W+T+
Sbjct: 388 RYCCCASLVHIRQRVNQLL*IIS*KANLI*KNVIMCWPCCSYHPCMCTHVEIIALWVTNS 567
Query: 219 VVNNSAGWNIIWLSRNEKFSVVILLGNDQCELG 121
++NN + NI+W S EKFSV+I L N+ ELG
Sbjct: 568 IINNGSRRNIVWRSILEKFSVMIFLCNNNSELG 666
Score = 109 bits (232), Expect(2) = 6e-048
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = -2 / +2
Query: 578 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 399
QQKN+EL TF C GSS TG PAEV PPWL++VSD+SS+F NC AA+ A*+ GATT
Sbjct: 209 QQKNIELQTFRCSSGSSGTGVCPAEVRPPWLEDVSDMSSHFKNCEI*VAAK*A*RTGATT 388
Query: 398 DMAVVLLWY 372
D+AVVLLWY
Sbjct: 389 DIAVVLLWY 415
Score = 102 bits (217), Expect(2) = 6e-048
Identities = 52/69 (75%), Positives = 52/69 (75%)
Frame = -2 / +2
Query: 326 KPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FF 147
KPISS R ** VGLVVPIIPAC HM*KS G*QT LS TVP GTLSG P KNLV *FF
Sbjct: 461 KPISSKRT**CVGLVVPIIPACAHM*KS*LCG*QTALSITVPGGTLSGDPSWKNLV**FF 640
Query: 146 WAMINVNLG 120
A I VNLG
Sbjct: 641 CATITVNLG 667
>gb|BU835584.1|BU835584 T075G07 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 574
Score = 265 bits (574), Expect = 2e-070
Identities = 104/146 (71%), Positives = 118/146 (80%)
Frame = +1 / +1
Query: 145 QKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIG 324
+KNHHTKFF PG PDNVP GT++DNKVCHPRN DFY+C+HAGMIGTTRPTHYH+L DE+
Sbjct: 64 RKNHHTKFFQPGSPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVS 243
Query: 325 FNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXX 504
F+ DDLQELVHSLSYV QRSTTAISVVAPICYAHLAA Q+GQF+KF++
Sbjct: 244 FSADDLQELVHSLSYVCQRSTTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGGVT 423
Query: 505 XXXXVPVQELPRLHEKVRSSMFFC*A 582
VPV +LPRL EKV +SMFFC*A
Sbjct: 424 SAGAVPVPQLPRLQEKVCNSMFFC*A 501
Score = 198 bits (426), Expect = 5e-050
Identities = 94/145 (64%), Positives = 103/145 (71%)
Frame = -2 / -3
Query: 581 AQQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 402
AQQKNMEL TFSC G+ TGT PA+V PPWL+EVSD+SSNF+N P AARWA*Q+GAT
Sbjct: 500 AQQKNMELQTFSCSLGNCGTGTAPADVTPPWLEEVSDVSSNFINWPI*VAARWA*QIGAT 321
Query: 401 TDMAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QT 222
T+MAVVLLW+ S K SS + **VGLVVPIIPA *KS FLG QT
Sbjct: 320 TEMAVVLLWHTYERECTSSCRSSAEKLTSSNKTW**VGLVVPIIPA*AQR*KSLFLGWQT 141
Query: 221 LLSTTVPAGTLSGFPGMKNLVW*FF 147
LLS VP GTLSG PG KNLVW FF
Sbjct: 140 LLSMIVPGGTLSGDPGWKNLVWWFF 66
Score = 145 bits (311), Expect = 4e-034
Identities = 68/144 (47%), Positives = 95/144 (65%)
Frame = -1 / -2
Query: 582 CSAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSN 403
CS +EHG +FL+Q QL DR+++ R P MA SL + +L++L +L C+VG+AD N
Sbjct: 501 CSTKEHGIANFLLQPRQLWDRNSSCRCHPAMA*GSLGRVFKLHKLAHLSSCQVGIADWCN 322
Query: 402 N*YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTD 223
G A L ++ E +H+ LQ+I + LV Q+++VS P SPNH SM T +E+ V WM D
Sbjct: 321 YRDGSRASLAYI*EGMHKFLQIIC*KTNLV*QNMVVSRPCSPNHPSMSTEIEVIVSWMAD 142
Query: 222 FVVNNSAGWNIIWLSRNEKFSVVI 151
FVVN+ W+II SR EKFSVV+
Sbjct: 141 FVVNDRTRWDIIRRSRLEKFSVVV 70
>gb|CV240638.1|CV240638 WS0251.B21_O23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0251_O23 3', mRNA sequence
Length = 872
Score = 221 bits (476), Expect(2) = 5e-069
Identities = 88/132 (66%), Positives = 101/132 (76%)
Frame = +1 / -3
Query: 184 PDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSL 363
P + AGTV+DN VCHP+++DFYMC+HAGMIGTTRPTHYH+L DEIGF+ DDLQEL+HSL
Sbjct: 618 PFSQHAGTVIDNAVCHPQSYDFYMCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELIHSL 439
Query: 364 SYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRL 543
SYVYQRSTTAISVVAP+ YAHLAA Q+ QF+K D+M PV ELP L
Sbjct: 438 SYVYQRSTTAISVVAPVRYAHLAATQISQFLKCDDMSETSSSHGGLTSAGQTPVPELPEL 259
Query: 544 HEKVRSSMFFC* 579
H V SSMFFC*
Sbjct: 258 HRNVCSSMFFC* 223
Score = 110 bits (234), Expect(2) = 3e-028
Identities = 54/126 (42%), Positives = 75/126 (59%)
Frame = -1 / +1
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN 400
SAE+H A + +L R R MAR L H++ L EL NL C+V + D SN
Sbjct: 223 SAEKHRAADIPV*LRKLGHRGLPSRS*TSMARGCL*HVITLQEL*NLSCCQVSITDRSNY 402
Query: 399 *YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDF 220
Y CCA LVH+R+RV+QLL +I +A L+ ++VI+ WP H M THVEI W+T+
Sbjct: 403 RYCCCASLVHIRQRVNQLL*IIS*KANLI*KNVIMCWPCCSYHPCMCTHVEIIALWVTNS 582
Query: 219 VVNNSA 202
++NN +
Sbjct: 583 IINNGS 600
Score = 109 bits (232), Expect(3) = 7e-045
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = -2 / +2
Query: 578 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 399
QQKN+EL TF C GSS TG PAEV PPWL++VSD+SS+F NC AA+ A*+ GATT
Sbjct: 224 QQKNIELQTFRCSSGSSGTGVCPAEVRPPWLEDVSDMSSHFKNCEI*VAAK*A*RTGATT 403
Query: 398 DMAVVLLWY 372
D+AVVLLWY
Sbjct: 404 DIAVVLLWY 430
Score = 67.0 bits (140), Expect(3) = 7e-045
Identities = 34/43 (79%), Positives = 34/43 (79%)
Frame = -2 / +2
Query: 326 KPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPA 198
KPISS R ** VGLVVPIIPAC HM*KS G*QT LS TVPA
Sbjct: 476 KPISSKRT**CVGLVVPIIPACAHM*KS*LCG*QTALSITVPA 604
Score = 61.1 bits (127), Expect(2) = 5e-069
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +1 / -2
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAG 204
+PKFT+I+AQKNHHTKFF G PDNVP G
Sbjct: 766 SPKFTVIVAQKNHHTKFFQDGSPDNVPPG 680
Score = 43.2 bits (88), Expect(3) = 7e-045
Identities = 20/28 (71%), Positives = 20/28 (71%)
Frame = -2 / +3
Query: 203 PAGTLSGFPGMKNLVW*FFWAMINVNLG 120
P GTLSG P KNLV *FF A I VNLG
Sbjct: 681 PGGTLSGDPSWKNLV**FFCATITVNLG 764
Score = 35.4 bits (71), Expect(2) = 3e-028
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -1 / +2
Query: 195 NIIWLSRNEKFSVVILLGNDQCELG 121
NI+W S EKFSV+I L N+ ELG
Sbjct: 689 NIVWRSILEKFSVMIFLCNNNSELG 763
>gb|CA823228.1|CA823228 R22G04 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 659
Score = 235 bits (507), Expect = 4e-061
Identities = 89/111 (80%), Positives = 100/111 (90%)
Frame = +1 / +2
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTH 297
+P F +I+AQKNHHTKFF PG PDNVP GT++DNKVCHPRN DFY+C+HAGMIGTTRPTH
Sbjct: 323 SPTFVVIVAQKNHHTKFFQPGSPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTH 502
Query: 298 YHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQ 450
YH+L DE+GF+ DDLQ VHSLSYVYQRSTTAISVVAPICYAHLAA Q+GQ
Sbjct: 503 YHVLLDEVGFSADDLQXPVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQ 655
Score = 135 bits (289), Expect = 4e-031
Identities = 69/111 (62%), Positives = 73/111 (65%)
Frame = -2 / -3
Query: 452 NCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPI 273
N P AARWA*Q+GATT+MAVVLLWY S KP SS + **VGLVVPI
Sbjct: 657 NWPI*VAARWA*QIGATTEMAVVLLWYTYERECTGSCRSSAEKPTSSNKTW**VGLVVPI 478
Query: 272 IPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFWAMINVNLG 120
IPA *KS FLG QTLLS VP GTLSG PG KNLVW FF A I N+G
Sbjct: 477 IPA*AQR*KSLFLGWQTLLSMIVPGGTLSGDPGWKNLVWWFF*ATITTNVG 325
Score = 105 bits (223), Expect = 5e-022
Identities = 50/102 (49%), Positives = 66/102 (64%)
Frame = -1 / -2
Query: 450 LPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNH 271
L +L C+VG+AD G A LV++ E +H+ LQ+I + LV Q+++VS P SPNH
Sbjct: 655 LAHLSSCQVGIADWCXYRDGSRASLVYI*EGMHRXLQIIC*KTNLV*QNMVVSRPCSPNH 476
Query: 270 SSM*THVEIEVPWMTDFVVNNSAGWNIIWLSRNEKFSVVILL 145
SM T +E+ V WM DFVVN+ W II SR EKFSVV+ L
Sbjct: 475 PSMSTEIEVIVSWMADFVVNDRTRWYIIRRSRLEKFSVVVFL 350
>gb|CN520738.1|CN520738 GQ0108.B3_L05 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_L05 5', mRNA sequence
Length = 554
Score = 232 bits (500), Expect = 3e-060
Identities = 91/132 (68%), Positives = 103/132 (78%)
Frame = +1 / +2
Query: 184 PDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSL 363
PDNVP GTV+DN VCHP+++DFYMC+HAGMIGTTRPTHYH+L DEIGF+ DDLQEL+HSL
Sbjct: 5 PDNVPPGTVIDNAVCHPQSYDFYMCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELIHSL 184
Query: 364 SYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRL 543
SYVYQRSTTAISVVAP+ YAHLAA Q+ QF+K D+M PV ELP L
Sbjct: 185 SYVYQRSTTAISVVAPVRYAHLAATQISQFLKCDDMSETSSSHGGLTSAGQTPVPELPEL 364
Query: 544 HEKVRSSMFFC* 579
H V SSMFFC*
Sbjct: 365 HRNVCSSMFFC* 400
Score = 118 bits (253), Expect = 4e-026
Identities = 57/132 (43%), Positives = 79/132 (59%)
Frame = -1 / -2
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN 400
SAE+H A + +L R R MAR L H++ L EL NL C+V + D SN
Sbjct: 400 SAEKHRAADIPV*LRKLGHRGLPSRS*TSMARGCL*HVITLQEL*NLSCCQVSITDRSNY 221
Query: 399 *YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDF 220
Y CCA LVH+R+RV+QLL +I +A L+ ++VI+ WP H M THVEI W+T+
Sbjct: 220 RYCCCASLVHIRQRVNQLL*IIS*KANLI*KNVIMCWPCCSYHPCMCTHVEIIALWVTNS 41
Query: 219 VVNNSAGWNIIW 184
++NN + NI+W
Sbjct: 40 IINNGSRRNIVW 5
Score = 109 bits (232), Expect(2) = 3e-040
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = -2 / -3
Query: 578 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 399
QQKN+EL TF C GSS TG PAEV PPWL++VSD+SS+F NC AA+ A*+ GATT
Sbjct: 399 QQKNIELQTFRCSSGSSGTGVCPAEVRPPWLEDVSDMSSHFKNCEI*VAAK*A*RTGATT 220
Query: 398 DMAVVLLWY 372
D+AVVLLWY
Sbjct: 219 DIAVVLLWY 193
Score = 76.7 bits (161), Expect(2) = 3e-040
Identities = 38/48 (79%), Positives = 38/48 (79%)
Frame = -2 / -3
Query: 326 KPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSG 183
KPISS R ** VGLVVPIIPAC HM*KS G*QT LS TVP GTLSG
Sbjct: 147 KPISSKRT**CVGLVVPIIPACAHM*KS*LCG*QTALSITVPGGTLSG 4
>gb|CV246013.1|CV246013 WS0259.B21_P22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0259_P22 3', mRNA sequence
Length = 744
Score = 232 bits (500), Expect = 3e-060
Identities = 91/127 (71%), Positives = 104/127 (81%)
Frame = +1 / -2
Query: 202 GTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQR 381
GT++DNKVCHPRN DFY+C+HAGMIGTTRPTHYH+L DE+GF+ DDLQELVHSLSYVYQR
Sbjct: 710 GTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQR 531
Query: 382 STTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRS 561
STTAISVVAPICYAHLAA Q+GQF+KF++ VPV +LPRL EKV +
Sbjct: 530 STTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVPQLPRLQEKVCN 351
Query: 562 SMFFC*A 582
SMFFC*A
Sbjct: 350 SMFFC*A 330
Score = 171 bits (369), Expect = 4e-042
Identities = 82/127 (64%), Positives = 90/127 (70%)
Frame = -2 / +1
Query: 581 AQQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 402
AQQKNMEL TFSC G+ TGT PAEV PPWL+EVS++SSNF+N P AARWA*Q+GAT
Sbjct: 331 AQQKNMELQTFSCNLGNCGTGTAPAEVTPPWLEEVSEVSSNFINWPI*VAARWA*QIGAT 510
Query: 401 TDMAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QT 222
T+MAVVLLWY S KP SS + **VGLVVPIIPA *KS FLG QT
Sbjct: 511 TEMAVVLLWYTYERECTSSCRSSAEKPTSSNKTW**VGLVVPIIPA*AQR*KSLFLGWQT 690
Query: 221 LLSTTVP 201
LLS VP
Sbjct: 691 LLSMIVP 711
Score = 132 bits (282), Expect = 4e-030
Identities = 60/125 (48%), Positives = 85/125 (68%)
Frame = -1 / +3
Query: 582 CSAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSN 403
CS +EHG +FL+Q QL DR+++ RG P MA SLR + +L++L +L C+VG+AD N
Sbjct: 330 CSTKEHGIANFLLQPRQLWDRNSSCRGHPTMA*GSLRSIFKLHKLAHLSSCQVGIADWCN 509
Query: 402 N*YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTD 223
G A LV++ E +H+ LQ+I + LV Q+++VS P SPNH SM T +E+ V WM D
Sbjct: 510 YRDGSRASLVYI*EGMHKFLQIIC*KTNLV*QNMVVSRPCSPNHPSMSTEIEVIVSWMAD 689
Query: 222 FVVNN 208
FVVN+
Sbjct: 690 FVVND 704
>gb|BU832929.1|BU832929 T039H07 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 563
Score = 144 bits (308), Expect(2) = 2e-058
Identities = 52/63 (82%), Positives = 59/63 (93%)
Frame = +1 / +1
Query: 184 PDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSL 363
PDNVP GT++DNKVCHPRN DFY+C+HAGMIGTTRPTHYH+L DE+GF+ DDLQELVHSL
Sbjct: 31 PDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSADDLQELVHSL 210
Query: 364 SYV 372
SYV
Sbjct: 211 SYV 219
Score = 126 bits (269), Expect(2) = 1e-043
Identities = 51/70 (72%), Positives = 58/70 (82%)
Frame = -2 / -3
Query: 581 AQQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 402
AQQKNMEL TFSC G+ TGT PA+V PPWL+EVSD+SSNF+N P AARWA*Q+GA
Sbjct: 429 AQQKNMELQTFSCNLGNCGTGTAPADVTPPWLEEVSDVSSNFINWPI*VAARWA*QIGAA 250
Query: 401 TDMAVVLLWY 372
T+MAVVLLWY
Sbjct: 249 TEMAVVLLWY 220
Score = 102 bits (217), Expect(2) = 2e-058
Identities = 43/70 (61%), Positives = 49/70 (70%)
Frame = +1 / +2
Query: 373 YQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEK 552
YQRSTTAISV APICYAHLAA Q+GQF+KF++ VPV +LPRL EK
Sbjct: 221 YQRSTTAISVAAPICYAHLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVPQLPRLQEK 400
Query: 553 VRSSMFFC*A 582
V +SMFFC*A
Sbjct: 401 VCNSMFFC*A 430
Score = 71.2 bits (149), Expect(2) = 1e-043
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = -1 / -3
Query: 363 ERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNII 187
E +H+ LQ+I + LV Q+++VS P SPNH SM T +E+ V WM DFVVN+ W+II
Sbjct: 210 EGMHKFLQIIC*KTNLV*QNMVVSRPCSPNHPSMSTEIEVIVSWMADFVVNDRTRWDII 34
Score = 64.3 bits (134), Expect(2) = 2e-022
Identities = 35/55 (63%), Positives = 38/55 (69%)
Frame = -2 / -1
Query: 326 KPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNL 162
KP SS + **VGLVVPIIPA *KS FLG QTLLS VP GTLSG ++ L
Sbjct: 173 KPTSSNKTW**VGLVVPIIPA*AQR*KSLFLGWQTLLSMIVPGGTLSGDARLEKL 9
Score = 61.6 bits (128), Expect(2) = 2e-022
Identities = 30/70 (42%), Positives = 44/70 (62%)
Frame = -1 / -2
Query: 582 CSAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSN 403
CS +EHG +FL+Q QL DR+++ R P MA SL + +L++L +L C+VG+AD +
Sbjct: 430 CSTKEHGIANFLLQPRQLWDRNSSCRCHPTMA*GSLGRVFKLHKLAHLSSCQVGIADWCS 251
Query: 402 N*YGCCAPLV 373
G A LV
Sbjct: 250 YRDGSRASLV 221
>gb|CN518723.1|CN518723 GQ0104.B3_E10 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_E10 5', mRNA sequence
Length = 695
Score = 192 bits (413), Expect = 3e-048
Identities = 77/113 (68%), Positives = 88/113 (77%)
Frame = +1 / +1
Query: 244 DFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYA 423
DFY+C+HAGM TRPTHYH+L DE+GF+ DDLQELVHSLSYVYQRSTTAISVVAPICYA
Sbjct: 1 DFYLCAHAGMXXXTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQRSTTAISVVAPICYA 180
Query: 424 HLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC*A 582
HLAA Q+GQF+KF++ VPV +LPRL EKV +SMFFC*A
Sbjct: 181 HLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVPQLPRLQEKVCNSMFFC*A 339
Score = 144 bits (310), Expect = 5e-034
Identities = 67/106 (63%), Positives = 75/106 (70%)
Frame = -2 / -1
Query: 581 AQQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 402
AQQKNMEL TFSC G+ TGT PAEV PPWL+EVS++SSNF+N P AARWA*Q+GAT
Sbjct: 338 AQQKNMELQTFSCNLGNCGTGTAPAEVTPPWLEEVSEVSSNFINWPI*VAARWA*QIGAT 159
Query: 401 TDMAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPIIPA 264
T+MAVVLLWY S KP SS + **VGLV IIPA
Sbjct: 158 TEMAVVLLWYTYERECTSSCRSSAEKPTSSNKTW**VGLVXXIIPA 21
Score = 103 bits (219), Expect = 2e-021
Identities = 49/113 (43%), Positives = 73/113 (64%)
Frame = -1 / -3
Query: 582 CSAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSN 403
CS +EHG +FL+Q QL DR+++ RG P MA SLR + +L++L +L C+VG+AD N
Sbjct: 339 CSTKEHGIANFLLQPRQLWDRNSSCRGHPTMA*GSLRSIFKLHKLAHLSSCQVGIADWCN 160
Query: 402 N*YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEI 244
G A LV++ E +H+ LQ+I + LV Q+++VS P H SM T +E+
Sbjct: 159 YRDGSRASLVYI*EGMHKFLQIIC*KTNLV*QNMVVSRPCXXXHPSMSTEIEV 1
>gb|CV269504.1|CV269504 WS0208.B21_G24 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0208_G24 3', mRNA sequence
Length = 719
Score = 177 bits (381), Expect = 9e-044
Identities = 73/104 (70%), Positives = 82/104 (78%)
Frame = +1 / -3
Query: 271 MIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQ 450
MIGTTRPTHYH+L DE+GF+ DDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA Q+GQ
Sbjct: 717 MIGTTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQ 538
Query: 451 FIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC*A 582
F+KF++ VPV +LPRL EKV +SMFFC*A
Sbjct: 537 FMKFEDTSETSSSHGGVTSAGAVPVPQLPRLQEKVCNSMFFC*A 406
Score = 148 bits (317), Expect = 6e-035
Identities = 68/104 (65%), Positives = 75/104 (72%)
Frame = -2 / +2
Query: 581 AQQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 402
AQQKNMEL TFSC G+ TGT PAEV PPWL+EVS++SSNF+N P AARWA*Q+GAT
Sbjct: 407 AQQKNMELQTFSCNLGNCGTGTAPAEVTPPWLEEVSEVSSNFINWPI*VAARWA*QIGAT 586
Query: 401 TDMAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPII 270
TDMAVVLLWY S KP SS + **VGLVVPII
Sbjct: 587 TDMAVVLLWYTYERECTSSCRSSAEKPTSSNKTW**VGLVVPII 718
Score = 107 bits (229), Expect = 8e-023
Identities = 49/104 (47%), Positives = 71/104 (68%)
Frame = -1 / +1
Query: 582 CSAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSN 403
CS +EHG +FL+Q QL DR+++ RG P MA SLR + +L++L +L C+VG+AD N
Sbjct: 406 CSTKEHGIANFLLQPRQLWDRNSSCRGHPTMA*GSLRSIFKLHKLAHLSSCQVGIADWCN 585
Query: 402 N*YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNH 271
YG A LV++ E +H+ LQ+I + LV Q+++VS P SPNH
Sbjct: 586 YRYGSRASLVYI*EGMHKFLQIIC*KTNLV*QNMVVSRPCSPNH 717
>gb|CK090838.1|CK090838 F027P19.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F027P19 3', mRNA sequence
Length = 680
Score = 170 bits (365), Expect = 1e-041
Identities = 67/109 (61%), Positives = 80/109 (73%)
Frame = +1 / -2
Query: 259 SHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAA 438
+ ++GT+RP HYH+L DEIGF+PD+L LVHSLSYVYQRSTTA+S+VAPICYAHLAAA
Sbjct: 670 NRCSLLGTSRPAHYHVLLDEIGFSPDELLNLVHSLSYVYQRSTTAVSIVAPICYAHLAAA 491
Query: 439 QVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC*AA 585
Q+GQF+KF++ PV ELPRLHE V SMFFC* A
Sbjct: 490 QIGQFMKFEDFFEPFSGQRSMTSVGSTPVPELPRLHENVEGSMFFC*GA 344
>gb|CN524305.1|CN524305 GQ015M13.T3_E09 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_E09 5', mRNA sequence
Length = 849
Score = 132 bits (282), Expect(2) = 7e-034
Identities = 52/101 (51%), Positives = 67/101 (66%)
Frame = +1 / +3
Query: 157 HTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPD 336
H K + K N+ GTVVD K+CHP FDFY+ SHAG+ GT+RPTHYH+L DE F D
Sbjct: 243 HNKRDLTDKSGNILPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFTAD 422
Query: 337 DLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIK 459
LQ L ++L Y Y R T ++S+V P YAHLAA + +I+
Sbjct: 423 GLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIE 545
Score = 32.2 bits (64), Expect(2) = 7e-034
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 121 PKFTLIIAQKNHHTKFF 171
P+ T ++ QK HHT+FF
Sbjct: 183 PRVTFVVVQKRHHTRFF 233
>gb|DT480982.1|DT480982 WS02530.BR_I12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_I12 5', mRNA sequence
Length = 733
Score = 142 bits (304), Expect = 4e-033
Identities = 57/131 (43%), Positives = 79/131 (60%)
Frame = +1 / +3
Query: 187 DNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLS 366
+N+P GTVVD + HPR FDFY+CSH G+ GT+RPTHYH+L DE F D+LQ+LV++L
Sbjct: 18 ENIPPGTVVDTVITHPREFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLC 197
Query: 367 YVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLH 546
Y + R T +S+V P YAHLAA + +++ E LP+L
Sbjct: 198 YTFVRCTKPVSLVPPAYYAHLAAYRGRLYLERSECMASIRNASTISRAAPPKAAPLPKLS 377
Query: 547 EKVRSSMFFC* 579
E ++ MF+C*
Sbjct: 378 ENLKKLMFYC* 410
>gb|DT486279.1|DT486279 WS02530.B21_I12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_I12 3', mRNA sequence
Length = 733
Score = 142 bits (304), Expect = 4e-033
Identities = 57/131 (43%), Positives = 79/131 (60%)
Frame = +1 / -3
Query: 187 DNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLS 366
+N+P GTVVD + HPR FDFY+CSH G+ GT+RPTHYH+L DE F D+LQ+LV++L
Sbjct: 716 ENIPPGTVVDTVITHPREFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLC 537
Query: 367 YVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLH 546
Y + R T +S+V P YAHLAA + +++ E LP+L
Sbjct: 536 YTFVRCTKPVSLVPPAYYAHLAAYRGRLYLERSECMASIRNASTISRAAPPKAAPLPKLS 357
Query: 547 EKVRSSMFFC* 579
E ++ MF+C*
Sbjct: 356 ENLKKLMFYC* 324
>gb|DN488212.1|DN488212 R041G07.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R041G07 3', mRNA sequence
Length = 811
Score = 126 bits (270), Expect(2) = 3e-032
Identities = 49/93 (52%), Positives = 64/93 (68%)
Frame = +1 / -3
Query: 181 KPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHS 360
K N+ GTVVD +CHP FDFY+ SHAG+ GT+RPTHYH+L DE F+ D LQ L ++
Sbjct: 653 KSGNILPGTVVDTTICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFSSDGLQTLTNN 474
Query: 361 LSYVYQRSTTAISVVAPICYAHLAAAQVGQFIK 459
L Y Y R T ++S+V P YAHLAA + +I+
Sbjct: 473 LCYTYARCTRSVSIVPPAYYAHLAAFRARYYIE 375
Score = 32.2 bits (64), Expect(2) = 3e-032
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / -3
Query: 121 PKFTLIIAQKNHHTKFF 171
P+ T ++ QK HHT+FF
Sbjct: 737 PRVTFVVVQKRHHTRFF 687
>gb|CK097248.1|CK097248 UB44DPH02.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB44DPH02 3', mRNA sequence
Length = 762
Score = 129 bits (276), Expect(2) = 8e-032
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = +1 / -2
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 545 NDHRDRTAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 366
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 365 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 261
Score = 28.1 bits (55), Expect(2) = 8e-032
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / -2
Query: 121 PKFTLIIAQKNHHTKFF 171
P T ++ QK HHT+ F
Sbjct: 599 PPVTFVVVQKRHHTRLF 549
>gb|BU812023.1|BU812023 UL91TD02 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 616
Score = 129 bits (276), Expect(2) = 8e-032
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = +1 / +2
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 212 NDHRDRSAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 391
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 392 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 496
Score = 28.1 bits (55), Expect(2) = 8e-032
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +2
Query: 121 PKFTLIIAQKNHHTKFF 171
P T ++ QK HHT+ F
Sbjct: 158 PPVTFVVVQKRHHTRLF 208
>gb|BU894173.1|BU894173 X003H07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 618
Score = 129 bits (276), Expect(2) = 8e-032
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = +1 / +1
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 256 NDHRDRSAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 435
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 436 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 540
Score = 28.1 bits (55), Expect(2) = 8e-032
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +1
Query: 121 PKFTLIIAQKNHHTKFF 171
P T ++ QK HHT+ F
Sbjct: 202 PPVTFVVVQKRHHTRLF 252
>gb|BI127370.1|BI127370 G059P39Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 502
Score = 129 bits (276), Expect(2) = 8e-032
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = +1 / +2
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 176 NDHRDRSAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 355
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 356 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 460
Score = 28.1 bits (55), Expect(2) = 8e-032
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +2
Query: 121 PKFTLIIAQKNHHTKFF 171
P T ++ QK HHT+ F
Sbjct: 122 PPVTFVVVQKRHHTRLF 172
>gb|CV267224.1|CV267224 WS02031.B21_C18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02031_C18 3', mRNA sequence
Length = 960
Score = 128 bits (275), Expect(2) = 1e-031
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = +1 / -3
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 772 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 593
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 592 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 488
Score = 28.1 bits (55), Expect(2) = 1e-031
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / -3
Query: 121 PKFTLIIAQKNHHTKFF 171
P T ++ QK HHT+ F
Sbjct: 826 PPVTFVVVQKRHHTRLF 776
>gb|DT516220.1|DT516220 WS02430.B21_L23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_L23 3', mRNA sequence
Length = 910
Score = 128 bits (275), Expect(2) = 1e-031
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = +1 / -3
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 785 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 606
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 605 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 501
Score = 28.1 bits (55), Expect(2) = 1e-031
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / -3
Query: 121 PKFTLIIAQKNHHTKFF 171
P T ++ QK HHT+ F
Sbjct: 839 PPVTFVVVQKRHHTRLF 789
>gb|CV231236.1|CV231236 WS0193.B21_O22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0193_O22 3', mRNA sequence
Length = 875
Score = 128 bits (275), Expect(2) = 1e-031
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = +1 / -1
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 680 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 501
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 500 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 396
Score = 28.1 bits (55), Expect(2) = 1e-031
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / -1
Query: 121 PKFTLIIAQKNHHTKFF 171
P T ++ QK HHT+ F
Sbjct: 734 PPVTFVVVQKRHHTRLF 684
>gb|CV274847.1|CV274847 WS0174.B21.1_J06 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0174_J06 3', mRNA sequence
Length = 849
Score = 128 bits (275), Expect(2) = 1e-031
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = +1 / -2
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 761 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 582
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 581 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 477
Score = 28.1 bits (55), Expect(2) = 1e-031
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / -2
Query: 121 PKFTLIIAQKNHHTKFF 171
P T ++ QK HHT+ F
Sbjct: 815 PPVTFVVVQKRHHTRLF 765
>gb|DV464515.1|DV464515 MTUNUL1.P28.E03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 830
Score = 128 bits (275), Expect(2) = 1e-031
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = +1 / -3
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 756 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 577
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 576 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 472
Score = 28.1 bits (55), Expect(2) = 1e-031
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / -3
Query: 121 PKFTLIIAQKNHHTKFF 171
P T ++ QK HHT+ F
Sbjct: 810 PPVTFVVVQKRHHTRLF 760
>gb|BU818866.1|BU818866 UA35CPF05 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 503
Score = 128 bits (274), Expect(2) = 2e-031
Identities = 51/101 (50%), Positives = 66/101 (65%)
Frame = +1 / +2
Query: 157 HTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPD 336
H K + N+ GTVVD K+CHP FDFY+ SHAG+ GT+RPTHYH+L DE F D
Sbjct: 56 HNKRDQTDRSGNILPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFTAD 235
Query: 337 DLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIK 459
LQ L ++L Y Y R T ++S+V P YAHLAA + +I+
Sbjct: 236 GLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIE 358
Score = 28.1 bits (55), Expect(2) = 2e-031
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 133 LIIAQKNHHTKFF 171
L++ QK HHT+FF
Sbjct: 8 LVVVQKRHHTRFF 46
>gb|BU880106.1|BU880106 UM41TE06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 610
Score = 127 bits (271), Expect(2) = 4e-031
Identities = 47/80 (58%), Positives = 60/80 (75%)
Frame = +1 / +3
Query: 202 GTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQR 381
GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y Y R
Sbjct: 366 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYAR 545
Query: 382 STTAISVVAPICYAHLAAAQ 441
T ++S+V P YAHLAA++
Sbjct: 546 CTRSVSIVPPAYYAHLAASR 605
Score = 28.1 bits (55), Expect(2) = 4e-031
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +2
Query: 121 PKFTLIIAQKNHHTKFF 171
P T ++ QK HHT+ F
Sbjct: 263 PPVTFVVVQKRHHTRLF 313
>gb|AJ772440.1|AJ772440 AJ772440 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700006E12F1, mRNA sequence
Length = 418
Score = 132 bits (282), Expect = 4e-030
Identities = 51/95 (53%), Positives = 64/95 (67%)
Frame = +1 / +2
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N+H K N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 32 NNHRDRTSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 211
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
D +Q L ++L Y Y R T ++SVV P YAHLAA
Sbjct: 212 ADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAA 316
>gb|BU898140.1|BU898140 X075D09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 623
Score = 127 bits (272), Expect(2) = 2e-029
Identities = 49/95 (51%), Positives = 62/95 (65%)
Frame = +1 / +1
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 49 NDHRDRSAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 228
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
D LQ L ++L Y Y R T ++S+V P YAHL A
Sbjct: 229 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLVA 333
Score = 22.1 bits (42), Expect(2) = 2e-029
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +1 / +2
Query: 130 TLIIAQKNHHT 162
T ++ QK HHT
Sbjct: 5 TFVVVQKRHHT 37
>gb|CX171314.1|CX171314 G11_69-94_13.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 555
Score = 129 bits (276), Expect = 3e-029
Identities = 50/97 (51%), Positives = 64/97 (65%)
Frame = +1 / +3
Query: 145 QKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIG 324
+ N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE
Sbjct: 6 EANDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENK 185
Query: 325 FNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
F D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 186 FTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 296
>gb|BU894478.1|BU894478 X010A02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 650
Score = 128 bits (274), Expect = 5e-029
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = +1 / +3
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 27 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 206
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
Y R T ++S+V P YAHLAA
Sbjct: 207 TYARCTRSVSIVPPAYYAHLAA 272
>gb|BU819274.1|BU819274 UA41BPG08 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 627
Score = 127 bits (273), Expect = 7e-029
Identities = 48/81 (59%), Positives = 60/81 (74%)
Frame = +1 / +2
Query: 202 GTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQR 381
GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D +Q L ++L Y Y R
Sbjct: 5 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYAR 184
Query: 382 STTAISVVAPICYAHLAAAQV 444
T ++SVV P YAHLAA +V
Sbjct: 185 CTRSVSVVPPAYYAHLAAFRV 247
>gb|CK096964.1|CK096964 UB34DPA12.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB34DPA12 3', mRNA sequence
Length = 646
Score = 127 bits (273), Expect = 7e-029
Identities = 48/85 (56%), Positives = 60/85 (70%)
Frame = +1 / -2
Query: 181 KPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHS 360
K N+ G VVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D +Q L ++
Sbjct: 618 KSGNILPGAVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNN 439
Query: 361 LSYVYQRSTTAISVVAPICYAHLAA 435
L Y Y R T ++SVV P YAHLAA
Sbjct: 438 LCYTYARCTRSVSVVPPAYYAHLAA 364
>gb|BU896276.1|BU896276 X038C04 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 679
Score = 126 bits (269), Expect = 2e-028
Identities = 47/78 (60%), Positives = 58/78 (74%)
Frame = +1 / +2
Query: 202 GTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQR 381
GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y Y R
Sbjct: 26 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYAR 205
Query: 382 STTAISVVAPICYAHLAA 435
T ++S+V P YAHLAA
Sbjct: 206 CTRSVSIVPPAYYAHLAA 259
>gb|BU896297.1|BU896297 X038E11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 666
Score = 126 bits (269), Expect = 2e-028
Identities = 47/78 (60%), Positives = 58/78 (74%)
Frame = +1 / +2
Query: 202 GTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQR 381
GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y Y R
Sbjct: 26 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYAR 205
Query: 382 STTAISVVAPICYAHLAA 435
T ++S+V P YAHLAA
Sbjct: 206 CTRSVSIVPPAYYAHLAA 259
>gb|DT488774.1|DT488774 WS02537.B21_G04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02537_G04 3', mRNA sequence
Length = 635
Score = 126 bits (269), Expect = 2e-028
Identities = 51/70 (72%), Positives = 59/70 (84%)
Frame = -2 / +3
Query: 581 AQQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 402
AQQKN+EL TFSC G+ TGT PAEV PPWL+EVS++SSNF+N P AARWA*Q+GAT
Sbjct: 402 AQQKNIELQTFSCNLGNCGTGTAPAEVTPPWLEEVSEVSSNFINWPI*VAARWA*QIGAT 581
Query: 401 TDMAVVLLWY 372
T+MAVVLLWY
Sbjct: 582 TEMAVVLLWY 611
Score = 122 bits (260), Expect = 4e-027
Identities = 52/78 (66%), Positives = 58/78 (74%)
Frame = +1 / -2
Query: 349 LVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQ 528
LVHSLSYVYQRSTTAISVVAPICYAHLAA Q+GQF+KF++ VPV
Sbjct: 634 LVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVP 455
Query: 529 ELPRLHEKVRSSMFFC*A 582
+LPRL EKV +SMFFC*A
Sbjct: 454 QLPRLQEKVCNSMFFC*A 401
>gb|CK100043.1|CK100043 B006P29.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B006P29 5', mRNA sequence
Length = 475
Score = 116 bits (249), Expect = 1e-025
Identities = 43/77 (55%), Positives = 55/77 (71%)
Frame = +1 / +1
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D +Q L ++L Y
Sbjct: 211 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLWY 390
Query: 370 VYQRSTTAISVVAPICY 420
Y R T ++SVV P Y
Sbjct: 391 TYARCTRSVSVVPPAYY 441
>gb|DN484863.1|DN484863 K029P19.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K029P19 3', mRNA sequence
Length = 573
Score = 114 bits (244), Expect = 7e-025
Identities = 47/65 (72%), Positives = 54/65 (83%)
Frame = -2 / +1
Query: 581 AQQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 402
AQQKNMEL TFSC G+ TGT PA+V PPWL+EVSD+SSNF+N P AARWA*Q+GAT
Sbjct: 340 AQQKNMELQTFSCNLGNCGTGTAPADVTPPWLEEVSDVSSNFINWPI*VAARWA*QIGAT 519
Query: 401 TDMAV 387
T+MAV
Sbjct: 520 TEMAV 534
Score = 92.7 bits (196), Expect(2) = 3e-022
Identities = 39/69 (56%), Positives = 47/69 (68%)
Frame = +1 / -2
Query: 376 QRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKV 555
+ + TAISVVAPICYAHLAA Q+GQF+KF++ VPV +LPRL EKV
Sbjct: 545 KEAPTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVPQLPRLQEKV 366
Query: 556 RSSMFFC*A 582
+SMFFC*A
Sbjct: 365 CNSMFFC*A 339
Score = 32.7 bits (65), Expect(2) = 3e-022
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1 / -1
Query: 349 LVHSLSYVYQRST 387
LVHSLSYVYQRST
Sbjct: 573 LVHSLSYVYQRST 535
>gb|CV227387.1|CV227387 WS0167.B21_A17 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_A17
3', mRNA sequence
Length = 709
Score = 114 bits (243), Expect = 9e-025
Identities = 42/72 (58%), Positives = 52/72 (72%)
Frame = +1 / +3
Query: 220 KVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAIS 399
K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y Y R T ++S
Sbjct: 3 KICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVS 182
Query: 400 VVAPICYAHLAA 435
+V P YAHLAA
Sbjct: 183 IVPPAYYAHLAA 218
>gb|AJ777572.1|AJ777572 AJ777572 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400030C07F1, mRNA sequence
Length = 687
Score = 106 bits (227), Expect(2) = 1e-024
Identities = 38/71 (53%), Positives = 53/71 (74%)
Frame = +1 / +2
Query: 187 DNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLS 366
+N+P GTVVD + HP+ FDFY+CSH G+ GT++PTHYH+L DE F D+LQ+LV++L
Sbjct: 473 ENIPPGTVVDTVITHPKEFDFYLCSHWGVKGTSKPTHYHVLWDENQFTSDELQKLVYNLC 652
Query: 367 YVYQRSTTAIS 399
Y + R T +S
Sbjct: 653 YTFVRCTKPVS 685
Score = 26.7 bits (52), Expect(2) = 1e-024
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1 / +2
Query: 121 PKFTLIIAQKNHHTKFF 171
P T + QK HHT+ F
Sbjct: 377 PPITFAVVQKRHHTRLF 427
>gb|BU891188.1|BU891188 P047A12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 494
Score = 112 bits (239), Expect = 3e-024
Identities = 41/73 (56%), Positives = 53/73 (72%)
Frame = +1 / +3
Query: 217 NKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAI 396
+K+CHP F+FY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y Y R T ++
Sbjct: 3 SKICHPTEFNFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSV 182
Query: 397 SVVAPICYAHLAA 435
S+V P YAHLAA
Sbjct: 183 SIVPPAYYAHLAA 221
>gb|CK099351.1|CK099351 A063P66.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A063P66 5', mRNA sequence
Length = 546
Score = 100 bits (212), Expect(2) = 2e-023
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1 / +1
Query: 241 FDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICY 420
FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y Y R T ++S+V P Y
Sbjct: 55 FDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYY 234
Query: 421 AHLAA 435
AHLAA
Sbjct: 235 AHLAA 249
Score = 29.0 bits (57), Expect(2) = 2e-023
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 190 NVPAGTVVDNKVCHPRN 240
N+ GTVVD+K+CH N
Sbjct: 5 NILPGTVVDSKICHLLN 55
>gb|DV464201.1|DV464201 MTUNUL1.P24.D07 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 867
Score = 94.5 bits (200), Expect(2) = 2e-021
Identities = 36/67 (53%), Positives = 44/67 (65%)
Frame = +1 / +1
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 667 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 846
Query: 331 PDDLQEL 351
D LQ L
Sbjct: 847 ADGLQSL 867
Score = 28.1 bits (55), Expect(2) = 2e-021
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +1
Query: 121 PKFTLIIAQKNHHTKFF 171
P T ++ QK HHT+ F
Sbjct: 613 PPVTFVVVQKRHHTRLF 663
>gb|CK117051.1|CK117051 B024P66 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B024P66 5', mRNA sequence
Length = 276
Score = 95.9 bits (203), Expect(2) = 3e-021
Identities = 36/70 (51%), Positives = 46/70 (65%)
Frame = +1 / +3
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 66 NDHRDRTAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 245
Query: 331 PDDLQELVHS 360
D LQ L ++
Sbjct: 246 ADGLQSLTNN 275
Score = 25.8 bits (50), Expect(2) = 3e-021
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1 / +3
Query: 130 TLIIAQKNHHTKFF 171
T ++ QK HHT+ F
Sbjct: 21 TFVVVQKRHHTRLF 62
>gb|CA924736.1|CA924736 MTU7CL.P9.D08 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 383
Score = 100 bits (214), Expect = 9e-021
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = -2 / +2
Query: 578 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 399
QQKN+EL TF C GSS TG PAEV PPWL++VSD+SS+F NC AA+ A*+ GATT
Sbjct: 182 QQKNIELQTFRCSSGSSGTGVCPAEVRPPWLEDVSDMSSHFKNCEI*VAAK*A*RTGATT 361
Query: 398 DMAVVLL 378
D+AVVLL
Sbjct: 362 DIAVVLL 382
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 460,918,747
Number of Sequences: 369679
Number of extensions: 7055271
Number of successful extensions: 48919
Number of sequences better than 1.0e-020: 52
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 11464780880
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)