TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161284.2.6
(621 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU830565.1|BU830565 T010B04 Populus apical shoot cDNA li... 175 2e-043
gb|BU867388.1|BU867388 S077F01 Populus imbibed seed cDNA li... 175 2e-043
gb|CV130803.1|CV130803 X9SP04d12 Populus stem seasonal libr... 175 2e-043
gb|CV230426.1|CV230426 WS01916.B21_I03 PT-DX-N-A-10 Populus... 175 2e-043
gb|CV231620.1|CV231620 WS0195.B21_B08 PT-DX-N-A-10 Populus ... 175 2e-043
gb|CV276134.1|CV276134 WS0178.B21.1_M03 PTxD-NR-A-8 Populus... 175 2e-043
gb|CX174086.1|CX174086 E08_69-102_10.ab1 leaf inoculated wi... 175 2e-043
gb|BU868960.1|BU868960 M124C06 Populus flower cDNA library ... 174 5e-043
gb|BU881773.1|BU881773 UM67TC12 Populus flower cDNA library... 174 5e-043
gb|CV230525.1|CV230525 WS01916.B21_N05 PT-DX-N-A-10 Populus... 174 5e-043
gb|CV243040.1|CV243040 WS02516.B21.1_L18 PT-MB-N-A-15 Popul... 174 5e-043
gb|CV256627.1|CV256627 WS0244.B21_G01 PTxD-ICC-N-A-14 Popul... 174 5e-043
gb|DT475287.1|DT475287 WS0126.BR_K07 PT-GT-FL-A-3 Populus t... 174 5e-043
gb|DT505524.1|DT505524 WS01811.C21_C14 PTxD-IL-N-A-9 Populu... 174 5e-043
gb|BU887273.1|BU887273 R057BC04 Populus root cDNA library P... 173 7e-043
gb|CK100477.1|CK100477 C037P06.5pR Populus strain T89 leave... 173 7e-043
gb|CK112329.1|CK112329 R057C04 Populus root cDNA library Po... 173 7e-043
gb|CV268050.1|CV268050 WS0204.B21_G17 PTxN-IB-N-A-11 Populu... 173 1e-042
gb|DN484899.1|DN484899 K034P82.3pR Populus apical shoot cDN... 172 2e-042
gb|BU868768.1|BU868768 M120H07 Populus flower cDNA library ... 171 4e-042
gb|CV247080.1|CV247080 WS01116.B21_P02 PT-P-FL-A-2 Populus ... 171 4e-042
gb|CV249435.1|CV249435 WS01124.B21_C09 PT-P-FL-A-2 Populus ... 171 4e-042
gb|CV254507.1|CV254507 WS0241.B21_G18 PTxD-ICC-N-A-14 Popul... 171 4e-042
gb|CV255065.1|CV255065 WS02411.B21_P10 PTxD-ICC-N-A-14 Popu... 171 4e-042
gb|CV266673.1|CV266673 WS0203.B21_K15 PTxN-IB-N-A-11 Populu... 171 4e-042
gb|CV269997.1|CV269997 WS0209.B21_M21 PTxN-IB-N-A-11 Populu... 171 4e-042
gb|CX172583.1|CX172583 H04_69-45_16.ab1 leaf inoculated wit... 171 4e-042
gb|CX173750.1|CX173750 G12_69-62_14.ab1 leaf inoculated wit... 171 4e-042
gb|DT493944.1|DT493944 WS01116.BR_P02 PT-P-FL-A-2 Populus t... 171 4e-042
gb|DT496683.1|DT496683 WS01124.BR_C09 PT-P-FL-A-2 Populus t... 171 4e-042
gb|DT509011.1|DT509011 WS02422.BR_I19 PTxD-ICC-N-A-14 Popul... 171 4e-042
gb|DT513621.1|DT513621 WS02422.B21_I19 PTxD-ICC-N-A-14 Popu... 171 4e-042
gb|BU832159.1|BU832159 T030B01 Populus apical shoot cDNA li... 171 5e-042
gb|BU893720.1|BU893720 P081E04 Populus petioles cDNA librar... 170 7e-042
gb|BU892421.1|BU892421 P063D02 Populus petioles cDNA librar... 170 9e-042
gb|CX179617.1|CX179617 G03_45-114_13.ab1 leaf inoculated wi... 167 4e-041
gb|CV284019.1|CV284019 WS0188.B21_O17 PTxD-IL-N-A-9 Populus... 138 8e-039
gb|BU815790.1|BU815790 N046F06 Populus bark cDNA library Po... 156 9e-038
gb|BI070389.1|BI070389 C037P06U Populus strain T89 leaves P... 153 1e-037
gb|BU829956.1|BU829956 T002B11 Populus apical shoot cDNA li... 136 3e-037
gb|AJ776704.1|AJ776704 AJ776704 Populus euphratica root 3-6... 153 8e-037
gb|BU892984.1|BU892984 P071H05 Populus petioles cDNA librar... 151 4e-036
gb|CF236267.1|CF236267 PtaJXT10G10G1014 Poplar cDNA library... 141 4e-036
gb|CV276600.1|CV276600 WS0141.B21_E10 PTxD-IL-A-5 Populus t... 142 2e-033
gb|CV281298.1|CV281298 WS0181.B21_I21 PTxD-IL-N-A-9 Populus... 129 2e-029
gb|DT488265.1|DT488265 WS02535.B21_P07 PT-MB-N-A-15 Populus... 127 4e-029
gb|DN484898.1|DN484898 K034P58.3pR Populus apical shoot cDN... 71 9e-025
gb|DN494375.1|DN494375 K034P82.5pR Populus apical shoot cDN... 109 1e-023
gb|DT526007.1|DT526007 WS02046.C21_O01 PTxN-IB-N-A-11 Popul... 109 2e-023
>gb|BU830565.1|BU830565 T010B04 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 401
Score = 175 bits (377), Expect = 2e-043
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = -3 / +1
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 28 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 207
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 208 VIRGNSVVTVEALEPVTRTQ**MVL 282
Score = 124 bits (266), Expect = 4e-028
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +3 / -1
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 281 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 102
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 101 FAFSLI*SFLSMYFLRSGGCPDLLM 27
>gb|BU867388.1|BU867388 S077F01 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 465
Score = 175 bits (377), Expect = 2e-043
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = -3 / +3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 87 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 266
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 267 VIRGNSVVTVEALEPVTRTQ**MVL 341
Score = 124 bits (266), Expect = 4e-028
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +3 / -3
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 340 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 161
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 160 FAFSLI*SFLSMYFLRSGGCPDLLM 86
>gb|CV130803.1|CV130803 X9SP04d12 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 476
Score = 175 bits (377), Expect = 2e-043
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = -3 / +2
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 41 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 220
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 221 VIRGNSVVTVEALEPVTRTQ**MVL 295
Score = 124 bits (266), Expect = 4e-028
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +3 / -3
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 294 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 115
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 114 FAFSLI*SFLSMYFLRSGGCPDLLM 40
>gb|CV230426.1|CV230426 WS01916.B21_I03 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01916_I03 3', mRNA sequence
Length = 525
Score = 175 bits (377), Expect = 2e-043
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = -3 / -2
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 461 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 282
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 281 VIRGNSVVTVEALEPVTRTQ**MVL 207
Score = 124 bits (266), Expect = 4e-028
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +3 / +1
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 208 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 387
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 388 FAFSLI*SFLSMYFLRSGGCPDLLM 462
>gb|CV231620.1|CV231620 WS0195.B21_B08 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0195_B08 3', mRNA sequence
Length = 516
Score = 175 bits (377), Expect = 2e-043
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = -3 / -3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 454 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 275
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 274 VIRGNSVVTVEALEPVTRTQ**MVL 200
Score = 124 bits (266), Expect = 4e-028
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +3 / +3
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 201 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 380
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 381 FAFSLI*SFLSMYFLRSGGCPDLLM 455
>gb|CV276134.1|CV276134 WS0178.B21.1_M03 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0178_M03 3', mRNA sequence
Length = 578
Score = 175 bits (377), Expect = 2e-043
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = -3 / -1
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 527 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 348
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 347 VIRGNSVVTVEALEPVTRTQ**MVL 273
Score = 124 bits (266), Expect = 4e-028
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +3 / +1
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 274 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 453
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 454 FAFSLI*SFLSMYFLRSGGCPDLLM 528
>gb|CX174086.1|CX174086 E08_69-102_10.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 450
Score = 175 bits (377), Expect = 2e-043
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = -3 / +2
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 47 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 226
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 227 VIRGNSVVTVEALEPVTRTQ**MVL 301
Score = 124 bits (266), Expect = 4e-028
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +3 / -1
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 300 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 121
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 120 FAFSLI*SFLSMYFLRSGGCPDLLM 46
>gb|BU868960.1|BU868960 M124C06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 564
Score = 174 bits (374), Expect = 5e-043
Identities = 73/85 (85%), Positives = 82/85 (96%)
Frame = -3 / +2
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTV+VNG++KTDIGMV
Sbjct: 62 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVDVNGDEKTDIGMV 241
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 242 VIRGNSVVTVEALEPVTRTQ**MVL 316
Score = 124 bits (266), Expect = 4e-028
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +3 / -1
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 315 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 136
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 135 FAFSLI*SFLSMYFLRSGGCPDLLM 61
>gb|BU881773.1|BU881773 UM67TC12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 457
Score = 174 bits (374), Expect = 5e-043
Identities = 73/85 (85%), Positives = 82/85 (96%)
Frame = -3 / +1
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTV+VNG++KTDIGMV
Sbjct: 85 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVDVNGDEKTDIGMV 264
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 265 VIRGNSVVTVEALEPVTRTQ**MVL 339
Score = 124 bits (266), Expect = 4e-028
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +3 / -3
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 338 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 159
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 158 FAFSLI*SFLSMYFLRSGGCPDLLM 84
>gb|CV230525.1|CV230525 WS01916.B21_N05 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01916_N05 3', mRNA sequence
Length = 430
Score = 174 bits (374), Expect = 5e-043
Identities = 73/85 (85%), Positives = 82/85 (96%)
Frame = -3 / +3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTV+VNG++KTDIGMV
Sbjct: 66 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVDVNGDEKTDIGMV 245
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 246 VIRGNSVVTVEALEPVTRTQ**MVL 320
Score = 124 bits (266), Expect = 4e-028
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +3 / -1
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 319 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 140
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 139 FAFSLI*SFLSMYFLRSGGCPDLLM 65
>gb|CV243040.1|CV243040 WS02516.B21.1_L18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02516_L18 3', mRNA sequence
Length = 461
Score = 174 bits (374), Expect = 5e-043
Identities = 73/85 (85%), Positives = 82/85 (96%)
Frame = -3 / -2
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTV+VNG++KTDIGMV
Sbjct: 388 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVDVNGDEKTDIGMV 209
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 208 VIRGNSVVTVEALEPVTRTQ**MVL 134
Score = 124 bits (266), Expect = 4e-028
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +3 / +3
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 135 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 314
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 315 FAFSLI*SFLSMYFLRSGGCPDLLM 389
>gb|CV256627.1|CV256627 WS0244.B21_G01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_G01 3', mRNA sequence
Length = 452
Score = 174 bits (374), Expect = 5e-043
Identities = 73/85 (85%), Positives = 82/85 (96%)
Frame = -3 / -3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTV+VNG++KTDIGMV
Sbjct: 399 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVDVNGDEKTDIGMV 220
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 219 VIRGNSVVTVEALEPVTRTQ**MVL 145
Score = 124 bits (266), Expect = 4e-028
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +3 / +2
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 146 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 325
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 326 FAFSLI*SFLSMYFLRSGGCPDLLM 400
>gb|DT475287.1|DT475287 WS0126.BR_K07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0126_K07 5', mRNA sequence
Length = 464
Score = 174 bits (374), Expect = 5e-043
Identities = 73/85 (85%), Positives = 82/85 (96%)
Frame = -3 / +1
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTV+VNG++KTDIGMV
Sbjct: 85 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVDVNGDEKTDIGMV 264
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 265 VIRGNSVVTVEALEPVTRTQ**MVL 339
Score = 124 bits (266), Expect = 4e-028
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +3 / -1
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 338 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 159
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 158 FAFSLI*SFLSMYFLRSGGCPDLLM 84
>gb|DT505524.1|DT505524 WS01811.C21_C14 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01811_C14 3', mRNA sequence
Length = 480
Score = 174 bits (374), Expect = 5e-043
Identities = 73/85 (85%), Positives = 82/85 (96%)
Frame = -3 / -3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTV+VNG++KTDIGMV
Sbjct: 403 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVDVNGDEKTDIGMV 224
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 223 VIRGNSVVTVEALEPVTRTQ**MVL 149
Score = 124 bits (266), Expect = 4e-028
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +3 / +3
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 150 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 329
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 330 FAFSLI*SFLSMYFLRSGGCPDLLM 404
>gb|BU887273.1|BU887273 R057BC04 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 587
Score = 173 bits (373), Expect = 7e-043
Identities = 73/81 (90%), Positives = 79/81 (97%)
Frame = -3 / +3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 45 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 224
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
VIRGNSVV +EALEPV RSQ*
Sbjct: 225 VIRGNSVVTVEALEPVNRSQ* 287
Score = 121 bits (258), Expect = 5e-027
Identities = 54/81 (66%), Positives = 58/81 (71%)
Frame = +3 / -2
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HCDL TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 286 HCDLFTGSNASTVTTLLPLITTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 107
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 106 LI*SFLSIYFLRSGG*PDRLM 44
>gb|CK100477.1|CK100477 C037P06.5pR Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA clone C037P06 5', mRNA sequence
Length = 422
Score = 173 bits (373), Expect = 7e-043
Identities = 73/81 (90%), Positives = 79/81 (97%)
Frame = -3 / +3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 36 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 215
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
VIRGNSVV +EALEPV RSQ*
Sbjct: 216 VIRGNSVVTVEALEPVNRSQ* 278
Score = 121 bits (258), Expect = 5e-027
Identities = 54/81 (66%), Positives = 58/81 (71%)
Frame = +3 / -2
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HCDL TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 277 HCDLFTGSNASTVTTLLPLITTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 98
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 97 LI*SFLSIYFLRSGG*PDRLM 35
>gb|CK112329.1|CK112329 R057C04 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R057C04 5', mRNA sequence
Length = 619
Score = 173 bits (373), Expect = 7e-043
Identities = 73/81 (90%), Positives = 79/81 (97%)
Frame = -3 / +2
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 65 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 244
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
VIRGNSVV +EALEPV RSQ*
Sbjct: 245 VIRGNSVVTVEALEPVNRSQ* 307
Score = 121 bits (258), Expect = 5e-027
Identities = 54/81 (66%), Positives = 58/81 (71%)
Frame = +3 / -2
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HCDL TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 306 HCDLFTGSNASTVTTLLPLITTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 127
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 126 LI*SFLSIYFLRSGG*PDRLM 64
>gb|CV268050.1|CV268050 WS0204.B21_G17 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0204_G17 3', mRNA sequence
Length = 467
Score = 173 bits (372), Expect = 1e-042
Identities = 73/85 (85%), Positives = 81/85 (95%)
Frame = -3 / -3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++K DIGMV
Sbjct: 399 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKADIGMV 220
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 219 VIRGNSVVTVEALEPVTRTQ**MVL 145
Score = 122 bits (261), Expect = 2e-027
Identities = 54/85 (63%), Positives = 58/85 (68%)
Frame = +3 / +2
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS AS S S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 146 KTIHHCVLVTGSKASTVTTLLPLITTMPMSAFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 325
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 326 FAFSLI*SFLSMYFLRSGGCPDLLM 400
>gb|DN484899.1|DN484899 K034P82.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K034P82 3', mRNA sequence
Length = 525
Score = 172 bits (370), Expect = 2e-042
Identities = 73/85 (85%), Positives = 81/85 (95%)
Frame = -3 / -1
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKL IK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 501 MSRSGQPPDLKKYMDKKLLIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 322
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 321 VIRGNSVVTVEALEPVTRTQ**MVL 247
Score = 122 bits (261), Expect = 2e-027
Identities = 54/85 (63%), Positives = 59/85 (69%)
Frame = +3 / +2
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 248 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 427
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI SFLSMYFLRSGGCP+ LM
Sbjct: 428 FAFSLIRSFLSMYFLRSGGCPDLLM 502
>gb|BU868768.1|BU868768 M120H07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 386
Score = 171 bits (368), Expect = 4e-042
Identities = 71/81 (87%), Positives = 79/81 (97%)
Frame = -3 / +1
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 67 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 246
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
V+RGNSVV +EALEPV R+Q*
Sbjct: 247 VLRGNSVVTVEALEPVNRAQ* 309
Score = 117 bits (251), Expect = 5e-026
Identities = 53/81 (65%), Positives = 57/81 (70%)
Frame = +3 / -1
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 308 HCALFTGSNASTVTTLLPLSTTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 129
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 128 LI*SFLSIYFLRSGG*PDRLM 66
>gb|CV247080.1|CV247080 WS01116.B21_P02 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_P02 3', mRNA sequence
Length = 530
Score = 171 bits (368), Expect = 4e-042
Identities = 71/81 (87%), Positives = 79/81 (97%)
Frame = -3 / -1
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 395 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 216
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
V+RGNSVV +EALEPV R+Q*
Sbjct: 215 VLRGNSVVTVEALEPVNRAQ* 153
Score = 117 bits (251), Expect = 5e-026
Identities = 53/81 (65%), Positives = 57/81 (70%)
Frame = +3 / +1
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 154 HCALFTGSNASTVTTLLPLSTTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 333
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 334 LI*SFLSIYFLRSGG*PDRLM 396
>gb|CV249435.1|CV249435 WS01124.B21_C09 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_C09 3', mRNA sequence
Length = 422
Score = 171 bits (368), Expect = 4e-042
Identities = 71/81 (87%), Positives = 79/81 (97%)
Frame = -3 / -3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 381 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 202
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
V+RGNSVV +EALEPV R+Q*
Sbjct: 201 VLRGNSVVTVEALEPVNRAQ* 139
Score = 117 bits (251), Expect = 5e-026
Identities = 53/81 (65%), Positives = 57/81 (70%)
Frame = +3 / +2
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 140 HCALFTGSNASTVTTLLPLSTTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 319
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 320 LI*SFLSIYFLRSGG*PDRLM 382
>gb|CV254507.1|CV254507 WS0241.B21_G18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0241_G18 3', mRNA sequence
Length = 454
Score = 171 bits (368), Expect = 4e-042
Identities = 71/81 (87%), Positives = 79/81 (97%)
Frame = -3 / -1
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 418 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 239
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
V+RGNSVV +EALEPV R+Q*
Sbjct: 238 VLRGNSVVTVEALEPVNRAQ* 176
Score = 117 bits (251), Expect = 5e-026
Identities = 53/81 (65%), Positives = 57/81 (70%)
Frame = +3 / +3
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 177 HCALFTGSNASTVTTLLPLSTTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 356
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 357 LI*SFLSIYFLRSGG*PDRLM 419
>gb|CV255065.1|CV255065 WS02411.B21_P10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02411_P10 3', mRNA sequence
Length = 557
Score = 171 bits (368), Expect = 4e-042
Identities = 71/81 (87%), Positives = 79/81 (97%)
Frame = -3 / -1
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 419 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 240
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
V+RGNSVV +EALEPV R+Q*
Sbjct: 239 VLRGNSVVTVEALEPVNRAQ* 177
Score = 117 bits (251), Expect = 5e-026
Identities = 53/81 (65%), Positives = 57/81 (70%)
Frame = +3 / +1
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 178 HCALFTGSNASTVTTLLPLSTTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 357
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 358 LI*SFLSIYFLRSGG*PDRLM 420
>gb|CV266673.1|CV266673 WS0203.B21_K15 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0203_K15 3', mRNA sequence
Length = 555
Score = 171 bits (368), Expect = 4e-042
Identities = 71/81 (87%), Positives = 79/81 (97%)
Frame = -3 / -3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 445 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 266
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
V+RGNSVV +EALEPV R+Q*
Sbjct: 265 VLRGNSVVTVEALEPVNRAQ* 203
Score = 117 bits (251), Expect = 5e-026
Identities = 53/81 (65%), Positives = 57/81 (70%)
Frame = +3 / +3
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 204 HCALFTGSNASTVTTLLPLSTTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 383
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 384 LI*SFLSIYFLRSGG*PDRLM 446
>gb|CV269997.1|CV269997 WS0209.B21_M21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0209_M21 3', mRNA sequence
Length = 545
Score = 171 bits (368), Expect = 4e-042
Identities = 71/81 (87%), Positives = 79/81 (97%)
Frame = -3 / -3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 444 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 265
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
V+RGNSVV +EALEPV R+Q*
Sbjct: 264 VLRGNSVVTVEALEPVNRAQ* 202
Score = 117 bits (251), Expect = 5e-026
Identities = 53/81 (65%), Positives = 57/81 (70%)
Frame = +3 / +2
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 203 HCALFTGSNASTVTTLLPLSTTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 382
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 383 LI*SFLSIYFLRSGG*PDRLM 445
>gb|CX172583.1|CX172583 H04_69-45_16.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 481
Score = 171 bits (368), Expect = 4e-042
Identities = 71/81 (87%), Positives = 79/81 (97%)
Frame = -3 / +2
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 62 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 241
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
V+RGNSVV +EALEPV R+Q*
Sbjct: 242 VLRGNSVVTVEALEPVNRAQ* 304
Score = 117 bits (251), Expect = 5e-026
Identities = 53/81 (65%), Positives = 57/81 (70%)
Frame = +3 / -2
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 303 HCALFTGSNASTVTTLLPLSTTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 124
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 123 LI*SFLSIYFLRSGG*PDRLM 61
>gb|CX173750.1|CX173750 G12_69-62_14.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 508
Score = 171 bits (368), Expect = 4e-042
Identities = 71/81 (87%), Positives = 79/81 (97%)
Frame = -3 / +1
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 82 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 261
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
V+RGNSVV +EALEPV R+Q*
Sbjct: 262 VLRGNSVVTVEALEPVNRAQ* 324
Score = 119 bits (255), Expect = 1e-026
Identities = 54/81 (66%), Positives = 57/81 (70%)
Frame = +3 / -3
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 323 HCALFTGSNASTVTTLLPLSTTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 144
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLSMYFLRSGG P+RLM
Sbjct: 143 LI*SFLSMYFLRSGG*PDRLM 81
>gb|DT493944.1|DT493944 WS01116.BR_P02 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_P02 5', mRNA sequence
Length = 496
Score = 171 bits (368), Expect = 4e-042
Identities = 71/81 (87%), Positives = 79/81 (97%)
Frame = -3 / +3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 102 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 281
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
V+RGNSVV +EALEPV R+Q*
Sbjct: 282 VLRGNSVVTVEALEPVNRAQ* 344
Score = 117 bits (251), Expect = 5e-026
Identities = 53/81 (65%), Positives = 57/81 (70%)
Frame = +3 / -1
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 343 HCALFTGSNASTVTTLLPLSTTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 164
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 163 LI*SFLSIYFLRSGG*PDRLM 101
>gb|DT496683.1|DT496683 WS01124.BR_C09 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_C09 5', mRNA sequence
Length = 438
Score = 171 bits (368), Expect = 4e-042
Identities = 71/81 (87%), Positives = 79/81 (97%)
Frame = -3 / +1
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 58 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 237
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
V+RGNSVV +EALEPV R+Q*
Sbjct: 238 VLRGNSVVTVEALEPVNRAQ* 300
Score = 117 bits (251), Expect = 5e-026
Identities = 53/81 (65%), Positives = 57/81 (70%)
Frame = +3 / -2
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 299 HCALFTGSNASTVTTLLPLSTTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 120
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 119 LI*SFLSIYFLRSGG*PDRLM 57
>gb|DT509011.1|DT509011 WS02422.BR_I19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_I19 5', mRNA sequence
Length = 517
Score = 171 bits (368), Expect = 4e-042
Identities = 71/81 (87%), Positives = 79/81 (97%)
Frame = -3 / +1
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 121 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 300
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
V+RGNSVV +EALEPV R+Q*
Sbjct: 301 VLRGNSVVTVEALEPVNRAQ* 363
Score = 117 bits (251), Expect = 5e-026
Identities = 53/81 (65%), Positives = 57/81 (70%)
Frame = +3 / -3
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 362 HCALFTGSNASTVTTLLPLSTTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 183
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 182 LI*SFLSIYFLRSGG*PDRLM 120
>gb|DT513621.1|DT513621 WS02422.B21_I19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_I19 3', mRNA sequence
Length = 517
Score = 171 bits (368), Expect = 4e-042
Identities = 71/81 (87%), Positives = 79/81 (97%)
Frame = -3 / -1
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 397 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 218
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
V+RGNSVV +EALEPV R+Q*
Sbjct: 217 VLRGNSVVTVEALEPVNRAQ* 155
Score = 117 bits (251), Expect = 5e-026
Identities = 53/81 (65%), Positives = 57/81 (70%)
Frame = +3 / +3
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 156 HCALFTGSNASTVTTLLPLSTTMPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 335
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 336 LI*SFLSIYFLRSGG*PDRLM 398
>gb|BU832159.1|BU832159 T030B01 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 588
Score = 171 bits (367), Expect = 5e-042
Identities = 72/81 (88%), Positives = 78/81 (96%)
Frame = -3 / +3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIG V
Sbjct: 63 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGTV 242
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
VIRGNSVV +EALEPV RSQ*
Sbjct: 243 VIRGNSVVTVEALEPVNRSQ* 305
Score = 121 bits (258), Expect = 5e-027
Identities = 54/81 (66%), Positives = 58/81 (71%)
Frame = +3 / -3
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HCDL TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T FAF
Sbjct: 304 HCDLFTGSNASTVTTLLPLITTVPISVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFS 125
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 124 LI*SFLSIYFLRSGG*PDRLM 62
>gb|BU893720.1|BU893720 P081E04 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 601
Score = 170 bits (366), Expect = 7e-042
Identities = 71/81 (87%), Positives = 79/81 (97%)
Frame = -3 / +3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMD+KLQIK+NANR+V+GTLRGFDQFMNLVVDNTVE+NG++KTDIGMV
Sbjct: 66 MSRSGQPPDLKKYMDEKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVELNGDEKTDIGMV 245
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
VIRGNSVV +EALEPV RSQ*
Sbjct: 246 VIRGNSVVTVEALEPVNRSQ* 308
Score = 116 bits (247), Expect = 2e-025
Identities = 52/81 (64%), Positives = 56/81 (69%)
Frame = +3 / -1
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HCDL TGS+AS SV S P STVLSTT+FMNWSNPRSVP T FAF
Sbjct: 307 HCDLFTGSNASTVTTLLPLITTMPISVFSSPFNSTVLSTTKFMNWSNPRSVPTTILFAFS 128
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SF S+YFLRSGG P+RLM
Sbjct: 127 LI*SFSSIYFLRSGG*PDRLM 65
>gb|BU892421.1|BU892421 P063D02 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 568
Score = 170 bits (365), Expect = 9e-042
Identities = 71/81 (87%), Positives = 78/81 (96%)
Frame = -3 / +1
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVE+NG++KTD GMV
Sbjct: 70 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVELNGDEKTDTGMV 249
Query: 301 VIRGNSVVMIEALEPVARSQ* 239
VIRGNSVV +EALEPV RSQ*
Sbjct: 250 VIRGNSVVTVEALEPVNRSQ* 312
Score = 118 bits (253), Expect = 3e-026
Identities = 53/81 (65%), Positives = 57/81 (70%)
Frame = +3 / -3
Query: 240 HCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFI 419
HCDL TGS+AS SV S P STVLSTT+FMNWSNPRSVP T FAF
Sbjct: 311 HCDLFTGSNASTVTTLLPLITTMPVSVFSSPFNSTVLSTTKFMNWSNPRSVPTTILFAFS 132
Query: 420 LI*SFLSMYFLRSGGCPERLM 482
LI*SFLS+YFLRSGG P+RLM
Sbjct: 131 LI*SFLSIYFLRSGG*PDRLM 69
>gb|CX179617.1|CX179617 G03_45-114_13.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 527
Score = 167 bits (360), Expect = 4e-041
Identities = 70/84 (83%), Positives = 79/84 (94%)
Frame = -3 / +2
Query: 478 SRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVV 299
+R GQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMVV
Sbjct: 2 ARGGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMVV 181
Query: 298 IRGNSVVMIEALEPVARSQ*IIVL 227
IRGNSVV +EALEPV R+ * +VL
Sbjct: 182 IRGNSVVTVEALEPVTRTH**MVL 253
Score = 118 bits (253), Expect = 3e-026
Identities = 53/83 (63%), Positives = 57/83 (68%)
Frame = +3 / -3
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ C L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 252 KTIHQCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 73
Query: 408 FAFILI*SFLSMYFLRSGGCPER 476
FAF LI*SFLSMYFLRSGGCP R
Sbjct: 72 FAFSLI*SFLSMYFLRSGGCPPR 4
>gb|CV284019.1|CV284019 WS0188.B21_O17 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0188_O17 3', mRNA sequence
Length = 568
Score = 138 bits (296), Expect(2) = 8e-039
Identities = 56/61 (91%), Positives = 61/61 (100%)
Frame = -3 / -3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 494 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 315
Query: 301 V 299
V
Sbjct: 314 V 312
Score = 108 bits (230), Expect(2) = 1e-024
Identities = 46/56 (82%), Positives = 48/56 (85%)
Frame = +3 / +1
Query: 315 SVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFILI*SFLSMYFLRSGGCPERLM 482
SV S P TSTVLSTT+FMNWSNPRSVP T FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 328 SVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFSLI*SFLSMYFLRSGGCPDLLM 495
Score = 41.8 bits (85), Expect(2) = 8e-039
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = -3 / -1
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSVV +EALEPV R+Q* +VL
Sbjct: 304 VIRGNSVVTVEALEPVTRTQ**MVL 230
Score = 24.4 bits (47), Expect(2) = 1e-024
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / +3
Query: 228 RTMIHCDLATGSSAS 272
+T+ HC L TGS+AS
Sbjct: 231 KTIHHCVLVTGSNAS 275
>gb|BU815790.1|BU815790 N046F06 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 240
Score = 156 bits (336), Expect = 9e-038
Identities = 64/71 (90%), Positives = 70/71 (98%)
Frame = -3 / +1
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 28 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 207
Query: 301 VIRGNSVVMIE 269
VIRGNSVV +E
Sbjct: 208 VIRGNSVVTVE 240
Score = 108 bits (230), Expect = 4e-023
Identities = 46/56 (82%), Positives = 48/56 (85%)
Frame = +3 / -2
Query: 315 SVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFILI*SFLSMYFLRSGGCPERLM 482
SV S P TSTVLSTT+FMNWSNPRSVP T FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 194 SVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFSLI*SFLSMYFLRSGGCPDLLM 27
>gb|BI070389.1|BI070389 C037P06U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 414
Score = 153 bits (328), Expect(2) = 1e-037
Identities = 62/71 (87%), Positives = 69/71 (97%)
Frame = -3 / +3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 36 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 215
Query: 301 VIRGNSVVMIE 269
VIRGNSV ++
Sbjct: 216 VIRGNSVAQLK 248
Score = 103 bits (220), Expect(2) = 2e-023
Identities = 45/56 (80%), Positives = 48/56 (85%)
Frame = +3 / -3
Query: 315 SVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFILI*SFLSMYFLRSGGCPERLM 482
SV S P TSTVLSTT+FMNWSNPRSVP T FAF LI*SFLS+YFLRSGG P+RLM
Sbjct: 202 SVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFSLI*SFLSIYFLRSGG*PDRLM 35
Score = 25.4 bits (49), Expect(2) = 2e-023
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 240 HCDLATGSSAS 272
HCDL TGS+AS
Sbjct: 276 HCDLFTGSNAS 244
Score = 23.5 bits (45), Expect(2) = 1e-037
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3 / +2
Query: 274 IEALEPVARSQ* 239
+EALEPV RSQ*
Sbjct: 242 VEALEPVNRSQ* 277
>gb|BU829956.1|BU829956 T002B11 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 495
Score = 136 bits (292), Expect(2) = 3e-037
Identities = 55/60 (91%), Positives = 60/60 (100%)
Frame = -3 / +3
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MSRSGQPPDLKKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 96 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 275
Score = 108 bits (230), Expect(2) = 1e-024
Identities = 46/56 (82%), Positives = 48/56 (85%)
Frame = +3 / -3
Query: 315 SVLSFPLTSTVLSTTRFMNWSNPRSVPITTRFAFILI*SFLSMYFLRSGGCPERLM 482
SV S P TSTVLSTT+FMNWSNPRSVP T FAF LI*SFLSMYFLRSGGCP+ LM
Sbjct: 262 SVFSSPFTSTVLSTTKFMNWSNPRSVPTTILFAFSLI*SFLSMYFLRSGGCPDLLM 95
Score = 38.6 bits (78), Expect(2) = 3e-037
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -3 / +1
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
VIRGNSV +EALEPV R+Q* +VL
Sbjct: 295 VIRGNSVDTVEALEPVTRTQ**MVL 369
Score = 24.4 bits (47), Expect(2) = 1e-024
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / -2
Query: 228 RTMIHCDLATGSSAS 272
+T+ HC L TGS+AS
Sbjct: 368 KTIHHCVLVTGSNAS 324
>gb|AJ776704.1|AJ776704 AJ776704 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400017D04F1, mRNA sequence
Length = 307
Score = 153 bits (329), Expect = 8e-037
Identities = 65/85 (76%), Positives = 76/85 (89%)
Frame = -3 / +2
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
MS+SGQPP+LKKYMDKKLQIK+NANR+ GTLRGFDQFMNL VDNT EVNG++KTDIGMV
Sbjct: 53 MSKSGQPPNLKKYMDKKLQIKLNANRMGAGTLRGFDQFMNLAVDNTGEVNGDEKTDIGMV 232
Query: 301 VIRGNSVVMIEALEPVARSQ*IIVL 227
I+GNSVV +EALEPV ++Q +VL
Sbjct: 233 GIKGNSVVTVEALEPVTKTQG*MVL 307
Score = 108 bits (231), Expect = 3e-023
Identities = 50/85 (58%), Positives = 55/85 (64%)
Frame = +3 / -2
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ C L TGS+AS SV S P TS VLST +FMNWSNPRSVP
Sbjct: 306 KTIHPCVLVTGSNASTVTTLLPLIPTMPMSVFSSPFTSPVLSTAKFMNWSNPRSVPAPIL 127
Query: 408 FAFILI*SFLSMYFLRSGGCPERLM 482
FAF LI*SFLSMYFLR GGCP+ LM
Sbjct: 126 FAFSLI*SFLSMYFLRFGGCPDLLM 52
>gb|BU892984.1|BU892984 P071H05 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 430
Score = 151 bits (324), Expect = 4e-036
Identities = 64/75 (85%), Positives = 72/75 (96%)
Frame = -3 / +1
Query: 451 KKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVVIRGNSVVMI 272
KKYMDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMVVIRGNSVV +
Sbjct: 1 KKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMVVIRGNSVVTV 180
Query: 271 EALEPVARSQ*IIVL 227
EALEPV R+Q* +VL
Sbjct: 181 EALEPVTRTQ**MVL 225
Score = 101 bits (216), Expect = 3e-021
Identities = 46/74 (62%), Positives = 50/74 (67%)
Frame = +3 / -3
Query: 228 RTMIHCDLATGSSASXXXXXXXXXXXXXXSVLSFPLTSTVLSTTRFMNWSNPRSVPITTR 407
+T+ HC L TGS+AS SV S P TSTVLSTT+FMNWSNPRSVP T
Sbjct: 224 KTIHHCVLVTGSNASTVTTLLPLITTMPMSVFSSPFTSTVLSTTKFMNWSNPRSVPTTIL 45
Query: 408 FAFILI*SFLSMYF 449
FAF LI*SFLSMYF
Sbjct: 44 FAFSLI*SFLSMYF 3
>gb|CF236267.1|CF236267 PtaJXT10G10G1014 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 391
Score = 141 bits (302), Expect(3) = 4e-036
Identities = 60/71 (84%), Positives = 68/71 (95%)
Frame = -3 / +3
Query: 439 DKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVVIRGNSVVMIEALE 260
DKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMVVIRGNSVV +EALE
Sbjct: 60 DKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMVVIRGNSVVTVEALE 239
Query: 259 PVARSQ*IIVL 227
PV R+Q* +VL
Sbjct: 240 PVTRTQ**MVL 272
Score = 25.4 bits (49), Expect(3) = 4e-036
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1 / +3
Query: 471 RGSLRISRSTWTRSFRLR 418
R + RISRSTW + +++
Sbjct: 27 RAATRISRSTWDKKLQIK 80
Score = 22.6 bits (43), Expect(3) = 4e-036
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / +1
Query: 481 MSRSGQPP 458
MSRSGQPP
Sbjct: 16 MSRSGQPP 39
>gb|CV276600.1|CV276600 WS0141.B21_E10 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0141_E10 3', mRNA sequence
Length = 363
Score = 142 bits (304), Expect = 2e-033
Identities = 60/72 (83%), Positives = 69/72 (95%)
Frame = -3 / -2
Query: 442 MDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVVIRGNSVVMIEAL 263
MDKKLQIK+NANR+V+GTLRGFDQFMNLVVDNTV+VNG++KTDIGMVVIRGNSVV +EAL
Sbjct: 359 MDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVDVNGDEKTDIGMVVIRGNSVVTVEAL 180
Query: 262 EPVARSQ*IIVL 227
EPV R+Q* +VL
Sbjct: 179 EPVTRTQ**MVL 144
>gb|CV281298.1|CV281298 WS0181.B21_I21 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0181_I21 3', mRNA sequence
Length = 378
Score = 129 bits (276), Expect = 2e-029
Identities = 54/66 (81%), Positives = 63/66 (95%)
Frame = -3 / -3
Query: 424 IKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVVIRGNSVVMIEALEPVARS 245
+K+NANR+V+GTLRGFDQFMNLVVDNTVEVNG++KTDIGMVVIRGNSVV +EALEPV R+
Sbjct: 358 VKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMVVIRGNSVVTVEALEPVTRT 179
Query: 244 Q*IIVL 227
Q* +VL
Sbjct: 178 Q**MVL 161
>gb|DT488265.1|DT488265 WS02535.B21_P07 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_P07 3', mRNA sequence
Length = 911
Score = 127 bits (273), Expect = 4e-029
Identities = 53/66 (80%), Positives = 63/66 (95%)
Frame = -3 / -1
Query: 424 IKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVVIRGNSVVMIEALEPVARS 245
+K+NANR+V+GTLRGFDQFMNLVVDNTV+VNG++KTDIGMVVIRGNSVV +EALEPV R+
Sbjct: 341 VKLNANRMVVGTLRGFDQFMNLVVDNTVDVNGDEKTDIGMVVIRGNSVVTVEALEPVTRT 162
Query: 244 Q*IIVL 227
Q* +VL
Sbjct: 161 Q**MVL 144
>gb|DN484898.1|DN484898 K034P58.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K034P58 3', mRNA sequence
Length = 409
Score = 70.7 bits (148), Expect(3) = 9e-025
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = -3 / -1
Query: 436 KKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGND 323
+ + K+NANR+V+GTLRGFDQFMNLVVDN VEVNG++
Sbjct: 352 RSFKSKLNANRMVVGTLRGFDQFMNLVVDNIVEVNGDE 239
Score = 50.1 bits (103), Expect(3) = 9e-025
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -3 / -3
Query: 481 MSRSGQPPDLKKYMDKKLQIKM 416
MSRSGQPP LKKYMDKKLQIK+
Sbjct: 398 MSRSGQPPPLKKYMDKKLQIKI 333
Score = 29.9 bits (59), Expect(3) = 9e-025
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -3 / -2
Query: 319 TDIGMVVIRGNS 284
TDIGMVVIRGNS
Sbjct: 234 TDIGMVVIRGNS 199
>gb|DN494375.1|DN494375 K034P82.5pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K034P82 5', mRNA sequence
Length = 434
Score = 109 bits (233), Expect = 1e-023
Identities = 45/80 (56%), Positives = 61/80 (76%)
Frame = -3 / +2
Query: 481 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 302
+++SGQPP+ KK +DK LQI +NAN + +GTLRGFDQFMN V+ NG+ KTD+G+
Sbjct: 92 LTKSGQPPNFKKSLDKNLQINLNANGMGVGTLRGFDQFMNWGVNTPGGGNGDKKTDLGLG 271
Query: 301 VIRGNSVVMIEALEPVARSQ 242
I+GNSVV +E LEPV ++Q
Sbjct: 272 GIKGNSVVTVEPLEPVTKTQ 331
>gb|DT526007.1|DT526007 WS02046.C21_O01 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02046_O01 3', mRNA sequence
Length = 313
Score = 109 bits (232), Expect = 2e-023
Identities = 47/56 (83%), Positives = 52/56 (92%)
Frame = -3 / -2
Query: 394 GTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVVIRGNSVVMIEALEPVARSQ*IIVL 227
GTLRGFDQFMNLVVDNTVEVNG++K DIGMVVIRGNSVV +EALEPV R+Q* +VL
Sbjct: 312 GTLRGFDQFMNLVVDNTVEVNGDEKADIGMVVIRGNSVVTVEALEPVTRTQ**MVL 145
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 284,591,987
Number of Sequences: 369679
Number of extensions: 3914694
Number of successful extensions: 41311
Number of sequences better than 1.0e-020: 51
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 7587135145
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)