TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161272.2.21
(693 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN519836.1|CN519836 GQ0105.B3_D21 GQ010 Populus trichoca... 138 4e-067
gb|CF230144.1|CF230144 PtaC0004D11E0909 Poplar cDNA library... 135 2e-044
gb|CX653687.1|CX653687 PO02005E10 Poplar SC cDNA library Po... 83 1e-038
gb|CX169141.1|CX169141 C08_69-94_06.ab1 leaf inoculated wit... 78 6e-038
gb|DT509401.1|DT509401 WS02423.BR_K04 PTxD-ICC-N-A-14 Popul... 106 2e-037
gb|CX654585.1|CX654585 PO02016G03 Poplar SC cDNA library Po... 88 4e-037
gb|DT476275.1|DT476275 WS01228.B21_P13 PT-GT-FL-A-3 Populus... 122 1e-036
gb|DT473223.1|DT473223 WS01228.BR_P13 PT-GT-FL-A-3 Populus ... 122 2e-036
gb|CX167822.1|CX167822 F06_69-40_12.ab1 leaf inoculated wit... 149 2e-035
gb|DT515281.1|DT515281 WS02427.B21_C08 PTxD-ICC-N-A-14 Popu... 124 4e-035
gb|DT501012.1|DT501012 WS0131.BR_C07 PTxD-IL-FL-A-4 Populus... 129 4e-033
gb|BU834936.1|BU834936 T067E04 Populus apical shoot cDNA li... 137 9e-032
gb|BU863137.1|BU863137 S024E03 Populus imbibed seed cDNA li... 134 4e-031
gb|BU893566.1|BU893566 P079E05 Populus petioles cDNA librar... 134 4e-031
gb|BU896443.1|BU896443 X040G03 Populus wood cDNA library Po... 122 2e-030
gb|BU895481.1|BU895481 X024F10 Populus wood cDNA library Po... 126 5e-029
gb|CN519340.1|CN519340 GQ0102.B3_M07 GQ010 Populus trichoca... 121 1e-028
gb|CX658670.1|CX658670 PO01020G08 Poplar SC cDNA library Po... 87 2e-028
gb|CX659990.1|CX659990 PO01016F08 Poplar SC cDNA library Po... 87 2e-028
gb|CX654964.1|CX654964 PO01003C04 Poplar SC cDNA library Po... 87 2e-028
gb|CX657957.1|CX657957 PO01007D11 Poplar SC cDNA library Po... 87 2e-028
gb|BU889047.1|BU889047 P016A08 Populus petioles cDNA librar... 122 3e-027
gb|BU880599.1|BU880599 UM52TB12 Populus flower cDNA library... 121 6e-027
gb|DN494710.1|DN494710 M122A11.5pR Populus female catkins c... 117 8e-026
gb|CA926946.1|CA926946 MTU6CR.P3.B03 Aspen root cDNA Librar... 116 1e-025
gb|CA927445.1|CA927445 MTU6CR.P9.A12 Aspen root cDNA Librar... 116 1e-025
gb|BU826435.1|BU826435 UK120TF03 Populus apical shoot cDNA ... 115 4e-025
gb|BU827043.1|BU827043 UK127TG06 Populus apical shoot cDNA ... 114 5e-025
gb|BU862048.1|BU862048 S010F12 Populus imbibed seed cDNA li... 114 5e-025
gb|CA927328.1|CA927328 MTU6CR.P7.F07 Aspen root cDNA Librar... 114 7e-025
gb|CA926637.1|CA926637 MTU6CR.P17.D01 Aspen root cDNA Libra... 112 2e-024
gb|CX168297.1|CX168297 A04_69-14-1_02.ab1 leaf inoculated w... 112 2e-024
gb|BU815034.1|BU815034 N036D03 Populus bark cDNA library Po... 105 5e-024
gb|BU896416.1|BU896416 X040D03 Populus wood cDNA library Po... 105 2e-022
gb|BU888068.1|BU888068 P003C09 Populus petioles cDNA librar... 105 4e-022
gb|BU878035.1|BU878035 V042D07 Populus flower cDNA library ... 104 8e-022
gb|BP924916.1|BP924916 BP924916 full-length enriched poplar... 103 1e-021
gb|CX178504.1|CX178504 F02_45-59_12.ab1 leaf inoculated wit... 100 7e-021
>gb|CN519836.1|CN519836 GQ0105.B3_D21 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_D21 5', mRNA sequence
Length = 833
Score = 138 bits (296), Expect(2) = 4e-067
Identities = 54/123 (43%), Positives = 80/123 (65%)
Frame = +3 / +2
Query: 291 GNSLTEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIGIEKNVMGRVPYDNMFLDDQAQE 470
GNS TEPYIVAHN+L +H Y K Y+ + +GI +V+ P N D +A +
Sbjct: 395 GNSATEPYIVAHNMLLSHGAAADIYRKKYKAKQQGSVGISLDVIWFEPATNSTKDIEAAQ 574
Query: 471 RSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSYDIMGINYYTSRFSK 650
R+ D+ LGWF+EP++ GDYP SMR+ + DRLP FT+++ + GS D +GIN+YT+ +++
Sbjct: 575 RAQDFQLGWFIEPLILGDYPISMRNRVGDRLPKFTENDAALVKGSLDFVGINHYTTFYAR 754
Query: 651 HID 659
D
Sbjct: 755 SND 763
Score = 136 bits (292), Expect(2) = 4e-067
Identities = 52/87 (59%), Positives = 61/87 (70%)
Frame = +3 / +2
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y + IN L GIEPYVTLFHWD PQAL D Y G+L +I+KD+ FA+ CF ++GD VK
Sbjct: 107 YNKFINALLAQGIEPYVTLFHWDLPQALHDRYNGWLSPQIIKDFATFAETCFQNYGDRVK 286
Query: 183 NWFTFNEPQTFSSFSYGTGIFAPGRCS 263
NW TFNEP T S Y G+ APGRCS
Sbjct: 287 NWITFNEPHTVSIQGYDVGLQAPGRCS 367
Score = 103 bits (219), Expect = 1e-021
Identities = 74/180 (41%), Positives = 87/180 (48%)
Frame = -3 / -3
Query: 541 LMEKG*SPRTTGSMNHPRL*SMDLSWAWSSRNILSYGTRPITFFSIPICASLLPL*CLLY 362
L+E G*SP+ GS+N P S L A S + G+ IT +P L L
Sbjct: 645 LIEIG*SPKIKGSINQPS*KSWALWAASMSFVLFVAGSNHITSSDMPTDPCCFALYFFL* 466
Query: 361 SWTVSA*ARRRLWATMYGSVSEFPVGLAHFCPGEHRPGAKIPVP*EKEENVCGSLKVNQF 182
+ * R LWAT+ GSV+EFP + EH PGA P * E V GSL V QF
Sbjct: 465 ISAAAP*ERSMLWATI*GSVAEFPARQKRWRRIEHLPGAWRPTS*P*IETV*GSLNVIQF 286
Query: 181 FTTSPKCTKHTLAKSV*SFTIXXXXXXXXXSTSA*GVSQWKSVTYGSMPFSFNKLMSLL* 2
FT SP KH A SF I S A*G SQW VT GS+P + LM+LL*
Sbjct: 285 FTLSP*F*KHVSANVAKSFMIWGLSHPLYLSCKA*GRSQWNRVT*GSIP*ASKALMNLL* 106
>gb|CF230144.1|CF230144 PtaC0004D11E0909 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 135 bits (289), Expect(2) = 2e-044
Identities = 53/123 (43%), Positives = 78/123 (63%)
Frame = +3 / +1
Query: 291 GNSLTEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIGIEKNVMGRVPYDNMFLDDQAQE 470
GNS EPYIVAHN+L +H Y K Y + +GI +V+ P N D +A +
Sbjct: 151 GNSAAEPYIVAHNMLLSHGTAADIYRKKYEAKQQGSVGISLDVIWFEPATNSTKDIEAAQ 330
Query: 471 RSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSYDIMGINYYTSRFSK 650
R+ D+ LGWF+EP++ GDYP SMR+ + DRLP FT+++ + GS D +GIN+YT+ +++
Sbjct: 331 RAQDFQLGWFIEPLILGDYPISMRNRVGDRLPKFTENDAALVKGSLDFVGINHYTTFYAR 510
Query: 651 HID 659
D
Sbjct: 511 SND 519
Score = 63.8 bits (133), Expect(2) = 2e-044
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +3 / +1
Query: 141 FAKVCFVHFGDVVKNWFTFNEPQTFSSFSYGTGIFAPGRCS 263
FA CF +GD VKNW TFNEP T + Y G+ APGRCS
Sbjct: 1 FADTCFQTYGDRVKNWITFNEPHTVAIQGYDVGLQAPGRCS 123
>gb|CX653687.1|CX653687 PO02005E10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02005E10 5', mRNA sequence
Length = 523
Score = 83.1 bits (175), Expect(3) = 1e-038
Identities = 33/65 (50%), Positives = 38/65 (58%)
Frame = +3 / +2
Query: 84 LVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVKNWFTFNEPQTFSSFSYGTGIFAPGRCS 263
L D GGFL +IV D+ ++A CF FGD VK W T NEP + Y G FAPGRCS
Sbjct: 2 LYDECGGFLSSKIVDDFAEYADFCFKTFGDRVKYWITMNEPNGLAINGYNFGSFAPGRCS 181
Query: 264 PGQKC 278
P C
Sbjct: 182 PLGNC 196
Score = 66.6 bits (139), Expect(3) = 1e-038
Identities = 27/61 (44%), Positives = 37/61 (60%)
Frame = +3 / +2
Query: 429 VPYDNMFLDDQAQERSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSY 608
+P N D A R++D+ GWF P+ GDYP SMR+L+ +RLP FT ++ L GS
Sbjct: 341 LPKFNTTADRIAVSRALDFMFGWFARPITFGDYPDSMRTLVGNRLPKFTKEQSAMLKGSL 520
Query: 609 D 611
D
Sbjct: 521 D 523
Score = 48.3 bits (99), Expect(3) = 1e-038
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +3 / +2
Query: 285 PTGNSLTEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIGI 407
P GNS EPY+ AHN++ +H V Y Y+ + QIGI
Sbjct: 197 PGGNSAVEPYVAAHNMILSHGAAVKVYKDKYQAIQRGQIGI 319
>gb|CX169141.1|CX169141 C08_69-94_06.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 617
Score = 77.6 bits (163), Expect(3) = 6e-038
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +3 / +3
Query: 453 DDQAQERSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSYDIMGINYY 632
D +A R +D+ GWF P+ GDYP +M++++ RLP FT +E + GS D +G+NYY
Sbjct: 351 DIKAAYRELDFLFGWFANPLTYGDYPETMKAIVGHRLPKFTKEESALVKGSIDFLGVNYY 530
Query: 633 TSRFS 647
T+ ++
Sbjct: 531 TTNYA 545
Score = 67.0 bits (140), Expect(3) = 6e-038
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +3 / +3
Query: 141 FAKVCFVHFGDVVKNWFTFNEPQTFSSFSYGTGIFAPGRCS 263
+A+ CF FGD VK+W TFNEP +FS+ Y G FAPGRCS
Sbjct: 39 YAEFCFKTFGDRVKHWCTFNEPYSFSNNGYNGGTFAPGRCS 161
Score = 51.0 bits (105), Expect(3) = 6e-038
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3 / +3
Query: 291 GNSLTEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIGI 407
GNS TEPY+VAHNL+ HA V Y + Y+ ++ +IGI
Sbjct: 186 GNSGTEPYMVAHNLILGHAAAVKLYREKYQASQKGKIGI 302
>gb|DT509401.1|DT509401 WS02423.BR_K04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02423_K04 5', mRNA sequence
Length = 869
Score = 106 bits (227), Expect(2) = 2e-037
Identities = 42/85 (49%), Positives = 54/85 (63%)
Frame = +3 / +1
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y +IN L E GI+PYVTL+HWD P L +S G+L+ +VK + +A CF FGD VK
Sbjct: 352 YNNVINALLEKGIQPYVTLYHWDLPLHLQESMEGWLNKEVVKYFAIYADTCFASFGDRVK 531
Query: 183 NWFTFNEPQTFSSFSYGTGIFAPGR 257
+W T NEP + Y +G FAPGR
Sbjct: 532 HWITLNEPLQTAINGYDSGSFAPGR 606
Score = 69.3 bits (145), Expect(2) = 2e-037
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = +3 / +1
Query: 303 TEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIGIEKNVMGRVPYDNMFLDDQAQERSID 482
TEPY+ +H+ + AHA V Y Y+ + QIG+ + N D A R ++
Sbjct: 622 TEPYLASHHQILAHAAAVSIYRXKYKDKQGGQIGLVLDCEWAETGSNKTEDKVAASRRLE 801
Query: 483 YNLGWFMEPVVRGDYPFSMRSL 548
+ LGW++ P+ GDYP MR +
Sbjct: 802 FQLGWYLNPLYYGDYPEVMREI 867
>gb|CX654585.1|CX654585 PO02016G03 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02016G03 5', mRNA sequence
Length = 476
Score = 88.1 bits (186), Expect(2) = 4e-037
Identities = 32/66 (48%), Positives = 42/66 (63%)
Frame = +3 / +2
Query: 66 WDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVKNWFTFNEPQTFSSFSYGTGIF 245
+D P AL Y G L +++VK++ D+A CF FGD VKNW TFN + ++ Y G F
Sbjct: 2 YDLPLALEKKYNGLLSNQVVKEFADYADFCFKTFGDRVKNWMTFNXTRVVAALGYDNGFF 181
Query: 246 APGRCS 263
APGRCS
Sbjct: 182 APGRCS 199
Score = 86.8 bits (183), Expect(2) = 4e-037
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +3 / +2
Query: 291 GNSLTEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIGIEKNVMGRVPYDNMFLDDQAQE 470
GNS TEPYIVAH+L+ +HA V Y + Y+ + +IGI + + P D+ A +
Sbjct: 224 GNSATEPYIVAHHLILSHAAAVQRYREKYQEKQKGRIGILLDFVYYQPLTRSKADNLAAQ 403
Query: 471 RSIDYNLGWFMEPVVRGDYPFSMR 542
R+ D+++GWF+ P+V G+YP +M+
Sbjct: 404 RARDFHVGWFIHPIVYGEYPKTMQ 475
>gb|DT476275.1|DT476275 WS01228.B21_P13 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01228_P13 3', mRNA sequence
Length = 936
Score = 122 bits (262), Expect(2) = 1e-036
Identities = 46/87 (52%), Positives = 58/87 (66%)
Frame = +3 / -3
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y RLI+ + E GI PY L+H+D P AL Y G L ++VKD+ D+A CF FGD VK
Sbjct: 703 YNRLIDYMIEKGITPYANLYHYDLPLALEKKYKGLLSYQVVKDFADYADFCFKTFGDRVK 524
Query: 183 NWFTFNEPQTFSSFSYGTGIFAPGRCS 263
NW TFNEP+ ++ Y G+FAPGRCS
Sbjct: 523 NWMTFNEPRVVAALGYDNGLFAPGRCS 443
Score = 50.1 bits (103), Expect(2) = 1e-036
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3 / -3
Query: 291 GNSLTEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIGI 407
G+S TEPYIVAH+L+ +HA V Y + Y+ + +IGI
Sbjct: 418 GDSATEPYIVAHHLILSHAAAVQRYREKYQEKQKGRIGI 302
>gb|DT473223.1|DT473223 WS01228.BR_P13 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01228_P13 5', mRNA sequence
Length = 908
Score = 122 bits (262), Expect(2) = 2e-036
Identities = 46/87 (52%), Positives = 58/87 (66%)
Frame = +3 / +3
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y RLI+ + E GI PY L+H+D P AL Y G L ++VKD+ D+A CF FGD VK
Sbjct: 474 YNRLIDYMIEKGITPYANLYHYDLPLALEKKYKGLLSYQVVKDFADYADFCFKTFGDRVK 653
Query: 183 NWFTFNEPQTFSSFSYGTGIFAPGRCS 263
NW TFNEP+ ++ Y G+FAPGRCS
Sbjct: 654 NWMTFNEPRVVAALGYDNGLFAPGRCS 734
Score = 49.6 bits (102), Expect(2) = 2e-036
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +3 / +3
Query: 291 GNSLTEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIG 404
G+S TEPYIVAH+L+ +HA V Y + Y+ NK +G
Sbjct: 759 GDSATEPYIVAHHLILSHAAAVQRYREKYQENKREGLG 872
>gb|CX167822.1|CX167822 F06_69-40_12.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 605
Score = 149 bits (320), Expect = 2e-035
Identities = 58/103 (56%), Positives = 73/103 (70%)
Frame = +3 / +3
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
YK LI+ + NG+ PYVT+FHWDTPQAL D YGGFL++ IV D+ DFA +CF FGD VK
Sbjct: 297 YKNLIDEIISNGLVPYVTVFHWDTPQALFDKYGGFLNESIVNDFRDFADLCFRSFGDRVK 476
Query: 183 NWFTFNEPQTFSSFSYGTGIFAPGRCSPGQKCANPTGNSLTEP 311
+W T NEP +S+ + +G+FAPGRCS A G+S TEP
Sbjct: 477 HWVTLNEPSIYSASGFDSGVFAPGRCSA*VDKACQAGDSATEP 605
>gb|DT515281.1|DT515281 WS02427.B21_C08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02427_C08 3', mRNA sequence
Length = 816
Score = 124 bits (266), Expect(2) = 4e-035
Identities = 46/87 (52%), Positives = 58/87 (66%)
Frame = +3 / -3
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y RLI+ + E GI PY L+H+D P AL Y G L +++VKD+ D+A CF FGD VK
Sbjct: 382 YNRLIDYMIERGITPYANLYHYDLPLALEKKYNGLLSNQVVKDFADYADFCFKTFGDRVK 203
Query: 183 NWFTFNEPQTFSSFSYGTGIFAPGRCS 263
NW TFNEP+ ++ Y G FAPGRCS
Sbjct: 202 NWMTFNEPRVVAALGYDNGFFAPGRCS 122
Score = 43.2 bits (88), Expect(2) = 4e-035
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3 / -3
Query: 291 GNSLTEPYIVAHNLLRAHAETVHEYNK 371
GNS TEPYIVAH+L+ +HA V Y +
Sbjct: 97 GNSATEPYIVAHHLILSHAAAVQRYRE 17
>gb|DT501012.1|DT501012 WS0131.BR_C07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0131_C07 5', mRNA sequence
Length = 912
Score = 129 bits (276), Expect(2) = 4e-033
Identities = 51/87 (58%), Positives = 58/87 (66%)
Frame = +3 / +2
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y I+ L +NG++PYVTLFHWDTPQAL D YGGFL IV D+ DF +CF +FGD VK
Sbjct: 524 YNDFIDDLLKNGLQPYVTLFHWDTPQALEDKYGGFLSPSIVNDFRDFVDLCFQNFGDRVK 703
Query: 183 NWFTFNEPQTFSSFSYGTGIFAPGRCS 263
W T NEP FS Y G APGR S
Sbjct: 704 KWITLNEPWMFSVQGYDMGTMAPGRIS 784
Score = 32.2 bits (64), Expect(2) = 4e-033
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3 / +2
Query: 303 TEPYIVAHNLLRAHAETVHEYNKHYR 380
TE Y V+H+LL AHA V Y + Y+
Sbjct: 827 TEVYTVSHHLLLAHAAAVKLYKEKYQ 904
>gb|BU834936.1|BU834936 T067E04 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 686
Score = 137 bits (293), Expect = 9e-032
Identities = 54/87 (62%), Positives = 60/87 (68%)
Frame = +3 / +1
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y LIN L NGI P+VTLFHWD PQAL D Y GFL + V DY D+A CF FGD VK
Sbjct: 424 YNNLINELLANGITPFVTLFHWDLPQALDDEYSGFLSSKAVDDYLDYADFCFKTFGDRVK 603
Query: 183 NWFTFNEPQTFSSFSYGTGIFAPGRCS 263
+W TFNEP +FS+ Y G FAPGRCS
Sbjct: 604 HWCTFNEPYSFSNKGYNGGTFAPGRCS 684
>gb|BU863137.1|BU863137 S024E03 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 716
Score = 134 bits (288), Expect = 4e-031
Identities = 54/87 (62%), Positives = 59/87 (67%)
Frame = +3 / +2
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y LIN L NGI P+VTLFHWD PQAL D Y GFL + V DY +A CF FGD VK
Sbjct: 428 YNNLINELLANGITPFVTLFHWDLPQALDDEYSGFLSSKAVDDYLAYADFCFKTFGDRVK 607
Query: 183 NWFTFNEPQTFSSFSYGTGIFAPGRCS 263
+W TFNEP +FSS Y G FAPGRCS
Sbjct: 608 HWCTFNEPYSFSSNGYNGGTFAPGRCS 688
>gb|BU893566.1|BU893566 P079E05 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 703
Score = 134 bits (288), Expect = 4e-031
Identities = 54/87 (62%), Positives = 59/87 (67%)
Frame = +3 / +1
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y LIN L NGI P+VTLFHWD PQAL D Y GFL + V DY +A CF FGD VK
Sbjct: 424 YNNLINELLANGITPFVTLFHWDLPQALDDEYSGFLSSKAVDDYLAYADFCFKTFGDRVK 603
Query: 183 NWFTFNEPQTFSSFSYGTGIFAPGRCS 263
+W TFNEP +FSS Y G FAPGRCS
Sbjct: 604 HWCTFNEPYSFSSNGYNGGTFAPGRCS 684
>gb|BU896443.1|BU896443 X040G03 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 729
Score = 122 bits (260), Expect(3) = 2e-030
Identities = 48/99 (48%), Positives = 67/99 (67%)
Frame = +3 / +2
Query: 291 GNSLTEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIGIEKNVMGRVPYDNMFLDDQAQE 470
GNS TEPYIVAH+LL +HA V Y + Y+ +++ +IGI N PY N D A +
Sbjct: 65 GNSSTEPYIVAHHLLLSHAAAVKTYKEKYQASQNGKIGITLNTPWFEPYSNSTDDYDAAK 244
Query: 471 RSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPYFTDDEK 587
RS+D++LGWF+ P+ GDYP SMR L+K+RLP F+ ++
Sbjct: 245 RSLDFSLGWFLNPITYGDYPTSMRELVKERLPTFSSQDE 361
Score = 24.9 bits (48), Expect(3) = 2e-030
Identities = 7/25 (28%), Positives = 18/25 (72%)
Frame = +3 / +2
Query: 573 TDDEKEKLVGSYDIMGINYYTSRFS 647
T ++++ ++D +G+NYYT+ ++
Sbjct: 341 TFSSQDEVNVTFDFVGLNYYTAYYA 415
Score = 23.5 bits (45), Expect(3) = 2e-030
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +2
Query: 234 TGIFAPGRCS 263
+G FAPGRCS
Sbjct: 5 SGDFAPGRCS 34
>gb|BU895481.1|BU895481 X024F10 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 303
Score = 126 bits (269), Expect(2) = 5e-029
Identities = 48/76 (63%), Positives = 57/76 (75%)
Frame = +3 / +3
Query: 36 GIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVKNWFTFNEPQTF 215
G+EP+VT+FHWD+PQAL D Y GFL D+IV D+ D+A + F FGD VK W T NEPQ F
Sbjct: 21 GLEPFVTIFHWDSPQALEDKYEGFLSDQIVNDFRDYADL*FQKFGDRVKYWITLNEPQKF 200
Query: 216 SSFSYGTGIFAPGRCS 263
SS Y +G FAPGRCS
Sbjct: 201 SSAGYDSGDFAPGRCS 248
Score = 21.2 bits (40), Expect(2) = 5e-029
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / +3
Query: 291 GNSLTEPY 314
GNS TEPY
Sbjct: 279 GNSFTEPY 302
>gb|CN519340.1|CN519340 GQ0102.B3_M07 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0102_M07 5', mRNA sequence
Length = 620
Score = 121 bits (258), Expect(2) = 1e-028
Identities = 47/116 (40%), Positives = 78/116 (67%)
Frame = +3 / +1
Query: 291 GNSLTEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIGIEKNVMGRVPYDNMFLDDQAQE 470
G+S TEPYIVAH+L+ +HA V Y + Y+ + +IGI + + P + D+ A +
Sbjct: 52 GDSATEPYIVAHHLILSHAAAVQRYREKYQEKQKGRIGILLDFVYYEPLTSSKADNLAAQ 231
Query: 471 RSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSYDIMGINYYTS 638
R+ D+++GWF+ P+V G+YP +M++++ +RLP FT +E + + GS D +GIN YT+
Sbjct: 232 RARDFHIGWFIHPIVYGEYPKTMQNIVGNRLPQFTKEEVKMVKGSMDFVGINQYTT 399
Score = 25.4 bits (49), Expect(2) = 1e-028
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / +1
Query: 237 GIFAPGRCS 263
G+FAPGRCS
Sbjct: 1 GLFAPGRCS 27
>gb|CX658670.1|CX658670 PO01020G08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01020G08 5', mRNA sequence
Length = 709
Score = 87.2 bits (184), Expect(3) = 2e-028
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = +3 / +2
Query: 429 VPYDNMFLDDQAQERSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSY 608
+P N D A R++D+ GWF P+ GDYP SMR+L+ +RLP FT ++ L GS
Sbjct: 194 LPKFNTTADRIAVSRALDFMFGWFARPITFGDYPDSMRTLVGNRLPKFTKEQSAMLKGSL 373
Query: 609 DIMGINYYTSRFSKHIDIS 665
D +G+NYYT+ +++ + ++
Sbjct: 374 DFLGLNYYTANYAESVPLT 430
Score = 48.3 bits (99), Expect(3) = 2e-028
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +3 / +2
Query: 285 PTGNSLTEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIGI 407
P GNS EPY+ AHN++ +H V Y Y+ + QIGI
Sbjct: 50 PGGNSAVEPYVAAHNMILSHGAAVKVYKDKYQAIQRGQIGI 172
Score = 28.1 bits (55), Expect(3) = 2e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 237 GIFAPGRCSPGQKC 278
G FAPGRCSP C
Sbjct: 8 GSFAPGRCSPLGNC 49
>gb|CX659990.1|CX659990 PO01016F08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01016F08 5', mRNA sequence
Length = 653
Score = 87.2 bits (184), Expect(3) = 2e-028
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = +3 / +2
Query: 429 VPYDNMFLDDQAQERSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSY 608
+P N D A R++D+ GWF P+ GDYP SMR+L+ +RLP FT ++ L GS
Sbjct: 194 LPKFNTTADRIAVSRALDFMFGWFARPITFGDYPDSMRTLVGNRLPKFTKEQSAMLKGSL 373
Query: 609 DIMGINYYTSRFSKHIDIS 665
D +G+NYYT+ +++ + ++
Sbjct: 374 DFLGLNYYTANYAESVPLT 430
Score = 48.3 bits (99), Expect(3) = 2e-028
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +3 / +2
Query: 285 PTGNSLTEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIGI 407
P GNS EPY+ AHN++ +H V Y Y+ + QIGI
Sbjct: 50 PGGNSAVEPYVAAHNMILSHGAAVKVYKDKYQAIQRGQIGI 172
Score = 28.1 bits (55), Expect(3) = 2e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 237 GIFAPGRCSPGQKC 278
G FAPGRCSP C
Sbjct: 8 GSFAPGRCSPLGNC 49
>gb|CX654964.1|CX654964 PO01003C04 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01003C04 5', mRNA sequence
Length = 638
Score = 87.2 bits (184), Expect(3) = 2e-028
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = +3 / +2
Query: 429 VPYDNMFLDDQAQERSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSY 608
+P N D A R++D+ GWF P+ GDYP SMR+L+ +RLP FT ++ L GS
Sbjct: 194 LPKFNTTADRIAVSRALDFMFGWFARPITFGDYPDSMRTLVGNRLPKFTKEQSAMLKGSL 373
Query: 609 DIMGINYYTSRFSKHIDIS 665
D +G+NYYT+ +++ + ++
Sbjct: 374 DFLGLNYYTANYAESVPLT 430
Score = 48.3 bits (99), Expect(3) = 2e-028
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +3 / +2
Query: 285 PTGNSLTEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIGI 407
P GNS EPY+ AHN++ +H V Y Y+ + QIGI
Sbjct: 50 PGGNSAVEPYVAAHNMILSHGAAVKVYKDKYQAIQRGQIGI 172
Score = 28.1 bits (55), Expect(3) = 2e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 237 GIFAPGRCSPGQKC 278
G FAPGRCSP C
Sbjct: 8 GSFAPGRCSPLGNC 49
>gb|CX657957.1|CX657957 PO01007D11 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01007D11 5', mRNA sequence
Length = 638
Score = 87.2 bits (184), Expect(3) = 2e-028
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = +3 / +2
Query: 429 VPYDNMFLDDQAQERSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSY 608
+P N D A R++D+ GWF P+ GDYP SMR+L+ +RLP FT ++ L GS
Sbjct: 194 LPKFNTTADRIAVSRALDFMFGWFARPITFGDYPDSMRTLVGNRLPKFTKEQSAMLKGSL 373
Query: 609 DIMGINYYTSRFSKHIDIS 665
D +G+NYYT+ +++ + ++
Sbjct: 374 DFLGLNYYTANYAESVPLT 430
Score = 48.3 bits (99), Expect(3) = 2e-028
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +3 / +2
Query: 285 PTGNSLTEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIGI 407
P GNS EPY+ AHN++ +H V Y Y+ + QIGI
Sbjct: 50 PGGNSAVEPYVAAHNMILSHGAAVKVYKDKYQAIQRGQIGI 172
Score = 28.1 bits (55), Expect(3) = 2e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 237 GIFAPGRCSPGQKC 278
G FAPGRCSP C
Sbjct: 8 GSFAPGRCSPLGNC 49
>gb|BU889047.1|BU889047 P016A08 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 672
Score = 122 bits (260), Expect = 3e-027
Identities = 49/83 (59%), Positives = 55/83 (66%)
Frame = +3 / +1
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y LIN L NGI P+VTLFHWD P+AL D Y GFL + V DY +A CF FGD VK
Sbjct: 424 YNNLINELLANGITPFVTLFHWDLPRALDDEYSGFLSSKAVDDYLAYADFCFKTFGDRVK 603
Query: 183 NWFTFNEPQTFSSFSYGTGIFAP 251
+W TFNEP +FSS Y G FAP
Sbjct: 604 HWCTFNEPYSFSSNGYNGGTFAP 672
>gb|BU880599.1|BU880599 UM52TB12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 591
Score = 121 bits (258), Expect = 6e-027
Identities = 47/116 (40%), Positives = 78/116 (67%)
Frame = +3 / +2
Query: 291 GNSLTEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIGIEKNVMGRVPYDNMFLDDQAQE 470
G+S TEPYIVAH+L+ +HA V Y + Y+ + +IGI + + P + D+ A +
Sbjct: 14 GDSATEPYIVAHHLILSHAAAVQRYREKYQEKQKGRIGILLDFVYYEPLTSSKADNLAAQ 193
Query: 471 RSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSYDIMGINYYTS 638
R+ D+++GWF+ P+V G+YP +M++++ +RLP FT +E + + GS D +GIN YT+
Sbjct: 194 RARDFHIGWFIHPIVYGEYPKTMQNIVGNRLPQFTKEEVKMVKGSMDFVGINQYTT 361
>gb|DN494710.1|DN494710 M122A11.5pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M122A11 5', mRNA sequence
Length = 652
Score = 117 bits (250), Expect = 8e-026
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +3 / +3
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y LI+ L +NGI+PYVTLFHWDTPQA+ D YGGFL I+ D+ DF ++CF FGD VK
Sbjct: 423 YNNLIDELIKNGIQPYVTLFHWDTPQAIEDKYGGFLSPNILIDFRDFVELCFQRFGDRVK 602
Query: 183 NWFTFNEPQTFSSFSY 230
+W T NEP FS Y
Sbjct: 603 HWITLNEPFMFSVNGY 650
>gb|CA926946.1|CA926946 MTU6CR.P3.B03 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 602
Score = 116 bits (249), Expect = 1e-025
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3 / -3
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y LIN L NGI P+VTLFHWD PQAL D Y GFL + V DY D+A CF FGD VK
Sbjct: 234 YNNLINELLANGITPFVTLFHWDLPQALDDEYSGFLSSKAVDDYLDYADFCFKTFGDRVK 55
Query: 183 NWFTFNEPQTFSSFSY 230
+W TFNEP +FS+ Y
Sbjct: 54 HWCTFNEPYSFSNNGY 7
>gb|CA927445.1|CA927445 MTU6CR.P9.A12 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 595
Score = 116 bits (249), Expect = 1e-025
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3 / -2
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y LIN L NGI P+VTLFHWD PQAL D Y GFL + V DY D+A CF FGD VK
Sbjct: 234 YNNLINELLANGITPFVTLFHWDLPQALDDEYSGFLSSKAVDDYLDYADFCFKTFGDRVK 55
Query: 183 NWFTFNEPQTFSSFSY 230
+W TFNEP +FS+ Y
Sbjct: 54 HWCTFNEPYSFSNNGY 7
>gb|BU826435.1|BU826435 UK120TF03 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 660
Score = 115 bits (245), Expect = 4e-025
Identities = 47/82 (57%), Positives = 52/82 (63%)
Frame = +3 / +1
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y LIN L NGI P+VTLFHWD PQAL D Y GFL + V D + CF FGD VK
Sbjct: 415 YNNLINELLANGITPFVTLFHWDLPQALDDEYSGFLSSKAVDDXLAYVDFCFKTFGDRVK 594
Query: 183 NWFTFNEPQTFSSFSYGTGIFA 248
+W TFNEP +FSS Y G FA
Sbjct: 595 HWCTFNEPYSFSSNGYNGGTFA 660
>gb|BU827043.1|BU827043 UK127TG06 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 661
Score = 114 bits (244), Expect = 5e-025
Identities = 46/79 (58%), Positives = 51/79 (64%)
Frame = +3 / +3
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y LIN L NGI P+VTLFHWD PQAL D Y GFL + V DY + CF FGD VK
Sbjct: 423 YNNLINELLANGITPFVTLFHWDLPQALDDEYSGFLSSKAVDDYLAYVDFCFKTFGDRVK 602
Query: 183 NWFTFNEPQTFSSFSYGTG 239
+W TFNEP +FSS Y G
Sbjct: 603 HWCTFNEPYSFSSNGYNGG 659
>gb|BU862048.1|BU862048 S010F12 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 653
Score = 114 bits (244), Expect = 5e-025
Identities = 46/76 (60%), Positives = 51/76 (67%)
Frame = +3 / +1
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y LIN L NGI P+VTLFHWD PQAL D Y GFL + V DY +A CF FGD VK
Sbjct: 424 YNNLINELLANGITPFVTLFHWDLPQALDDEYSGFLSSKAVDDYLAYADFCFKTFGDRVK 603
Query: 183 NWFTFNEPQTFSSFSY 230
+W TFNEP +FSS Y
Sbjct: 604 HWCTFNEPYSFSSNGY 651
>gb|CA927328.1|CA927328 MTU6CR.P7.F07 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 603
Score = 114 bits (243), Expect = 7e-025
Identities = 45/76 (59%), Positives = 51/76 (67%)
Frame = +3 / -1
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y LIN L NGI P+VTLFHWD PQAL D Y GFL + V DY D+A CF FGD VK
Sbjct: 234 YNNLINELLANGITPFVTLFHWDLPQALDDVYSGFLSSKAVDDYLDYADFCFKTFGDRVK 55
Query: 183 NWFTFNEPQTFSSFSY 230
+W TFNEP +F + Y
Sbjct: 54 HWCTFNEPYSFGNNGY 7
>gb|CA926637.1|CA926637 MTU6CR.P17.D01 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 603
Score = 112 bits (240), Expect = 2e-024
Identities = 45/76 (59%), Positives = 51/76 (67%)
Frame = +3 / +1
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y LIN L NGI P+VTLFHWD PQAL D Y GFL + V DY D+A CF F D VK
Sbjct: 370 YNNLINELLANGITPFVTLFHWDLPQALDDEYSGFLSSKAVDDYPDYADFCFKTFVDRVK 549
Query: 183 NWFTFNEPQTFSSFSY 230
+W TFNEP +FS+ Y
Sbjct: 550 HWCTFNEPYSFSNNGY 597
>gb|CX168297.1|CX168297 A04_69-14-1_02.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 666
Score = 112 bits (240), Expect = 2e-024
Identities = 44/73 (60%), Positives = 51/73 (69%)
Frame = +3 / +3
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y LIN L NGI P+VTLFHWD PQAL D Y GFL + V DY +A+ CF FGD VK
Sbjct: 444 YNNLINELLANGITPFVTLFHWDLPQALDDEYSGFLSSKAVDDYLGYAEFCFKTFGDRVK 623
Query: 183 NWFTFNEPQTFSS 221
+W TFNEP +FS+
Sbjct: 624 HWCTFNEPYSFSN 662
>gb|BU815034.1|BU815034 N036D03 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 710
Score = 105 bits (223), Expect(2) = 5e-024
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = +3 / +3
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y +IN L E GI+PYVTL+HWD P L +S G+L+ +VK + +A CF FGD VK
Sbjct: 393 YNNVINTLLEKGIQPYVTLYHWDLPLHLQESMEGWLNKEVVKYFAIYADTCFASFGDRVK 572
Query: 183 NWFTFNEPQTFSSFSYGTGIFAPGR 257
+W T NEP + + +G FAPGR
Sbjct: 573 HWITLNEPLQTAINGHDSGAFAPGR 647
Score = 25.8 bits (50), Expect(2) = 5e-024
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3 / +3
Query: 303 TEPYIVAHNLLRAHA 347
TEPY+ +H+ + AHA
Sbjct: 663 TEPYLASHHQILAHA 707
>gb|BU896416.1|BU896416 X040D03 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 677
Score = 105 bits (225), Expect = 2e-022
Identities = 39/66 (59%), Positives = 47/66 (71%)
Frame = +3 / +1
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y +IN NG EP++TLFHWD PQ L D+YGGFL D+IV D+ DFA++CF FGD VK
Sbjct: 478 YNNVINESIANGFEPFITLFHWDIPQGLEDNYGGFLSDQIVNDFRDFAELCFREFGDRVK 657
Query: 183 NWFTFN 200
W T N
Sbjct: 658 YWITLN 675
>gb|BU888068.1|BU888068 P003C09 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 678
Score = 105 bits (223), Expect = 4e-022
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = +3 / +2
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y +IN L E GI+PYVTL+HWD P L +S G+L+ +VK + +A CF FGD VK
Sbjct: 362 YNNVINTLLEKGIQPYVTLYHWDLPLHLQESMEGWLNKEVVKYFAIYADTCFASFGDRVK 541
Query: 183 NWFTFNEPQTFSSFSYGTGIFAPGR 257
+W T NEP + + +G FAPGR
Sbjct: 542 HWITLNEPLQTAINGHDSGAFAPGR 616
>gb|BU878035.1|BU878035 V042D07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 693
Score = 104 bits (221), Expect = 8e-022
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +3 / +1
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y RLI+ + E GI PY L+H+D P AL Y G L ++VKD+ D+A CF FGD VK
Sbjct: 454 YNRLIDYMIEKGITPYANLYHYDLPLALEKKYKGLLSYQVVKDFADYADFCFKTFGDRVK 633
Query: 183 NWFTFNEPQTFSSFSYGTGI 242
NW TFNEP+ ++ Y G+
Sbjct: 634 NWMTFNEPRVVAALGYDNGL 693
>gb|BP924916.1|BP924916 BP924916 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-038_A02.f 5', mRNA sequence
Length = 638
Score = 103 bits (220), Expect = 1e-021
Identities = 41/68 (60%), Positives = 46/68 (67%)
Frame = +3 / +1
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y LIN L NGI P+VTLFHWD PQAL D Y FL + V DY +A+ CF FGD VK
Sbjct: 427 YNNLINELLANGITPFVTLFHWDLPQALDDEYSEFLSSKAVDDYLGYAEFCFRTFGDRVK 606
Query: 183 NWFTFNEP 206
+W TFNEP
Sbjct: 607 HWCTFNEP 630
>gb|CX178504.1|CX178504 F02_45-59_12.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 628
Score = 100 bits (214), Expect = 7e-021
Identities = 39/79 (49%), Positives = 51/79 (64%)
Frame = +3 / +3
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y +LI+ L E G+EP+VT+ H D PQ LVD YGG+L + +D+ FA++CF FGD +K
Sbjct: 390 YNKLIDNLLERGMEPFVTIHHHDIPQELVDRYGGWLSPLMQEDFVYFAEICFKSFGDRIK 569
Query: 183 NWFTFNEPQTFSSFSYGTG 239
NW T NEP SY G
Sbjct: 570 NWITMNEPNLLVDMSYIRG 626
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 364,117,340
Number of Sequences: 369679
Number of extensions: 5282490
Number of successful extensions: 55278
Number of sequences better than 1.0e-020: 47
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 8647165240
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)