TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805202.2.1
(1139 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ769297.1|AJ769297 AJ769297 Populus euphratica leaf adu... 196 6e-061
gb|DT495598.1|DT495598 WS01120.BR_P04 PT-P-FL-A-2 Populus t... 196 1e-060
gb|CV248490.1|CV248490 WS01120.B21_P04 PT-P-FL-A-2 Populus ... 196 1e-060
gb|DT498907.1|DT498907 WS0116.BR_L05 PT-P-FL-A-2 Populus tr... 196 1e-060
gb|DT500911.1|DT500911 PX0019.BR_M17 PT-X-FL-A-1 Populus tr... 196 1e-060
gb|BU873882.1|BU873882 Q061A01 Populus flower cDNA library ... 196 1e-060
gb|CK098245.1|CK098245 A009P39.5pR Hybrid aspen plasmid lib... 194 2e-060
gb|CV246557.1|CV246557 WS01111.B21_B06 PT-P-FL-A-2 Populus ... 198 2e-060
gb|CA825212.1|CA825212 R55B12 two-month-old roots from clon... 194 1e-059
gb|CK098220.1|CK098220 A008P12.5pR Hybrid aspen plasmid lib... 191 2e-059
gb|DT489931.1|DT489931 WS02543.B21_J08 PT-MB-N-A-15 Populus... 184 4e-057
gb|CB239680.1|CB239680 RSH15C07 two-month-old roots from cl... 186 8e-057
gb|CV236388.1|CV236388 WS01223.B21_O18 PT-GT-FL-A-3 Populus... 182 1e-056
gb|AI161908.1|AI161908 A009P39U Hybrid aspen plasmid librar... 190 1e-055
gb|CF231938.1|CF231938 PtaC0027F12F1212 Poplar cDNA library... 190 3e-055
gb|BU820620.1|BU820620 UB12CPB07 Populus tremula cambium cD... 174 3e-054
gb|AI162294.1|AI162294 A015P38U Hybrid aspen plasmid librar... 187 7e-053
gb|CV238776.1|CV238776 WS0128.B21.1_A07 PT-GT-FL-A-3 Populu... 169 1e-052
gb|DT475725.1|DT475725 WS0128.BR_A07 PT-GT-FL-A-3 Populus t... 196 3e-052
gb|DT499923.1|DT499923 WS9991.BR_L17 PT-P-FL-A-2 Populus tr... 196 3e-049
gb|BU871910.1|BU871910 Q036A01 Populus flower cDNA library ... 190 1e-047
gb|BU824497.1|BU824497 UB65DPA03 Populus tremula cambium cD... 96 2e-046
gb|BI128260.1|BI128260 G073P32Y Populus cambium cDNA librar... 184 7e-046
gb|AI164764.1|AI164764 A068P40U Hybrid aspen plasmid librar... 156 4e-045
gb|CK088432.1|CK088432 A052P67.3pR Hybrid aspen plasmid lib... 84 3e-043
gb|CK099512.1|CK099512 A071P32.5pR Hybrid aspen plasmid lib... 161 8e-039
gb|CK116853.1|CK116853 B018P72 Hybrid aspen plasmid library... 139 5e-033
gb|AI164945.1|AI164945 A071P32U Hybrid aspen plasmid librar... 136 3e-031
gb|CF228071.1|CF228071 PtaXM0008D2D0208 Poplar cDNA library... 133 1e-030
gb|DT481964.1|DT481964 WS02533.BR_H16 PT-MB-N-A-15 Populus ... 133 2e-030
gb|DT487357.1|DT487357 WS02533.B21_H16 PT-MB-N-A-15 Populus... 133 2e-030
gb|CF234811.1|CF234811 PtaJXT0015D8D0808 Poplar cDNA librar... 127 1e-028
gb|CV230612.1|CV230612 WS0192.B21_B13 PT-DX-N-A-10 Populus ... 115 5e-025
gb|DN483755.1|DN483755 PSO202G05 Populus tomentiglandulosa ... 74 3e-024
gb|AI162392.1|AI162392 A016P78U Hybrid aspen plasmid librar... 69 6e-023
>gb|AJ769297.1|AJ769297 AJ769297 Populus euphratica leaf adult Populus euphratica cDNA
clone P0000100028D12F1, mRNA sequence
Length = 618
Score = 196 bits (422), Expect(2) = 6e-061
Identities = 74/102 (72%), Positives = 86/102 (84%)
Frame = -3 / +2
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SF KVL+ N DVL+GPLVSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 113 SFFKVLLKNFDVLSGPLVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 292
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
V+EW+P W YA+L CWLV+P F+GAA+VYE+FVRP N
Sbjct: 293 KVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFAN 418
Score = 112 bits (240), Expect(2) = 5e-031
Identities = 60/97 (61%), Positives = 64/97 (65%)
Frame = +2 / -1
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T AAPL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 405 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 226
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
ST D VSIAL +AYRG TKGP RTS L +TL+K
Sbjct: 225 ST*DLVSIALIDAYRG*TRLTKGPERTSKFLRRTLKK 115
Score = 100 bits (214), Expect(2) = 2e-021
Identities = 46/102 (45%), Positives = 66/102 (64%)
Frame = +1 / -3
Query: 604 HKMLIYMCSSIELWQY*PAIEEQLCIRPERKPFEYRSKGELE*SDK*VQHPVREPLLIIH 783
HK+LI +CS+ E+W PA + + I P+ P KG+L+ D *+++PV +PLLII+
Sbjct: 400 HKILINICSTTEVWNDQPAGQNEPRIWPDWYPLNDFGKGKLKECDH*IKNPVSKPLLIIN 221
Query: 784 SRFCFNCSNRGIQRIRK*NQRPREDIHVVDQDLEERSGSAPH 909
RF NC N IQRI K NQRPR+++ V+ ++LEE S H
Sbjct: 220 VRFSLNCPN*CIQRINKTNQRPRKNVEVLKKNLEEASSPRSH 95
Score = 59.3 bits (123), Expect(2) = 6e-061
Identities = 23/46 (50%), Positives = 34/46 (73%)
Frame = -3 / +2
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKSSNPRRSILEE 418
KKD S+PDDV++AA++YIE+NG+ AFE L+ K KS + + +E
Sbjct: 455 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGKSKSSGYTFYDE 592
Score = 42.3 bits (86), Expect(2) = 5e-031
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L L+ FS A PF SMY AA TSSGLL +SFF
Sbjct: 558 LPLVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSFF 454
Score = 22.1 bits (42), Expect(2) = 2e-021
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3 / -2
Query: 471 SQTLLIHFAQCTSVQLKLHHQVYLIHPS 554
SQ H QC S Q H V HPS
Sbjct: 539 SQKQKFHSLQCISQQQLERHLVC*RHPS 456
>gb|DT495598.1|DT495598 WS01120.BR_P04 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_P04 5', mRNA sequence
Length = 676
Score = 196 bits (423), Expect(2) = 1e-060
Identities = 74/104 (71%), Positives = 87/104 (83%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SF KVL+ N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 93 SFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 272
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
V+EW+P W YA+L CWLV+P F+GAA+VYE+FVRP N Q
Sbjct: 273 KVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 404
Score = 110 bits (234), Expect(2) = 4e-030
Identities = 59/97 (60%), Positives = 63/97 (64%)
Frame = +2 / -1
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T AAPL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 385 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 206
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
ST D VSIAL +AYRG T GP RTS L +TL+K
Sbjct: 205 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKK 95
Score = 57.9 bits (120), Expect(2) = 1e-060
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -3 / +3
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKS 448
KKD S+PDDV++AA++YIE+NG+ AFE L+ K KS
Sbjct: 435 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGKS 542
Score = 42.3 bits (86), Expect(2) = 4e-030
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L L+ FS A PF SMY AA TSSGLL +SFF
Sbjct: 538 LPLVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSFF 434
>gb|CV248490.1|CV248490 WS01120.B21_P04 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_P04 3', mRNA sequence
Length = 657
Score = 196 bits (423), Expect(2) = 1e-060
Identities = 74/104 (71%), Positives = 87/104 (83%)
Frame = -3 / -2
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SF KVL+ N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 584 SFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 405
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
V+EW+P W YA+L CWLV+P F+GAA+VYE+FVRP N Q
Sbjct: 404 KVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 273
Score = 110 bits (234), Expect(2) = 4e-030
Identities = 59/97 (60%), Positives = 63/97 (64%)
Frame = +2 / +1
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T AAPL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 292 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 471
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
ST D VSIAL +AYRG T GP RTS L +TL+K
Sbjct: 472 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKK 582
Score = 57.9 bits (120), Expect(2) = 1e-060
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -3 / -2
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKS 448
KKD S+PDDV++AA++YIE+NG+ AFE L+ K KS
Sbjct: 242 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGKS 135
Score = 42.3 bits (86), Expect(2) = 4e-030
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / +1
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L L+ FS A PF SMY AA TSSGLL +SFF
Sbjct: 139 LPLVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSFF 243
>gb|DT498907.1|DT498907 WS0116.BR_L05 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_L05
5', mRNA sequence
Length = 635
Score = 196 bits (423), Expect(2) = 1e-060
Identities = 74/104 (71%), Positives = 87/104 (83%)
Frame = -3 / +2
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SF KVL+ N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 140 SFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 319
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
V+EW+P W YA+L CWLV+P F+GAA+VYE+FVRP N Q
Sbjct: 320 KVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 451
Score = 110 bits (234), Expect(2) = 4e-030
Identities = 59/97 (60%), Positives = 63/97 (64%)
Frame = +2 / -3
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T AAPL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 432 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 253
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
ST D VSIAL +AYRG T GP RTS L +TL+K
Sbjct: 252 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKK 142
Score = 57.9 bits (120), Expect(2) = 1e-060
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -3 / +2
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKS 448
KKD S+PDDV++AA++YIE+NG+ AFE L+ K KS
Sbjct: 482 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGKS 589
Score = 42.3 bits (86), Expect(2) = 4e-030
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / -3
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L L+ FS A PF SMY AA TSSGLL +SFF
Sbjct: 585 LPLVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSFF 481
>gb|DT500911.1|DT500911 PX0019.BR_M17 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0019_M17
5', mRNA sequence
Length = 624
Score = 196 bits (423), Expect(2) = 1e-060
Identities = 74/104 (71%), Positives = 87/104 (83%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SF KVL+ N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 126 SFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 305
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
V+EW+P W YA+L CWLV+P F+GAA+VYE+FVRP N Q
Sbjct: 306 KVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 437
Score = 110 bits (234), Expect(2) = 4e-030
Identities = 59/97 (60%), Positives = 63/97 (64%)
Frame = +2 / -3
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T AAPL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 418 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 239
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
ST D VSIAL +AYRG T GP RTS L +TL+K
Sbjct: 238 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKK 128
Score = 57.9 bits (120), Expect(2) = 1e-060
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -3 / +3
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKS 448
KKD S+PDDV++AA++YIE+NG+ AFE L+ K KS
Sbjct: 468 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGKS 575
Score = 42.3 bits (86), Expect(2) = 4e-030
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / -3
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L L+ FS A PF SMY AA TSSGLL +SFF
Sbjct: 571 LPLVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSFF 467
>gb|BU873882.1|BU873882 Q061A01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 555
Score = 196 bits (423), Expect(2) = 1e-060
Identities = 74/104 (71%), Positives = 88/104 (84%)
Frame = -3 / +1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLKVL+ N DVLAGP++SL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 85 SFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 264
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
++EW+P W +AKL CWLV+P F+GAA+VYE+FVRP N Q
Sbjct: 265 KLIEWIPIWPFAKLILTCWLVVPYFSGAAYVYENFVRPFYANPQ 396
Score = 114 bits (243), Expect(2) = 8e-032
Identities = 60/97 (61%), Positives = 64/97 (65%)
Frame = +2 / -2
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T AAPL G TNQQ+K SFA Q G HS + AKVSS RVI E Q VSHC S
Sbjct: 377 GLTKFS*TYAAPLKYGTTNQQVKMSFANGQIGIHSMSLAKVSSKRVIME*RIQ*VSHCLS 198
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
ST DFVSIAL EAYRG GPARTS +T +K
Sbjct: 197 ST*DFVSIALIEAYRG*TRLITGPARTSKFSRRTFKK 87
Score = 57.9 bits (120), Expect(2) = 1e-060
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = -3 / +1
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKS 448
KKD S+PDDV+SAA++YIE+NG+ AFE L+ K KS
Sbjct: 427 KKDIFSKPDDVLSAAEKYIEENGTYAFEKLITKDKS 534
Score = 43.7 bits (89), Expect(2) = 8e-032
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = +2 / -2
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L+L+ FS A PF SMY AA+ TSSGLL SFF
Sbjct: 530 LSLVMSFSKA*VPFSSMYFSAADRTSSGLLKISFF 426
>gb|CK098245.1|CK098245 A009P39.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A009P39 5', mRNA sequence
Length = 575
Score = 194 bits (419), Expect(2) = 2e-060
Identities = 73/104 (70%), Positives = 86/104 (82%)
Frame = -3 / +2
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SF KVL+ N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 11 SFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 190
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
V+EW+P W YA+L CWLV+P F+GA +VYE+FVRP N Q
Sbjct: 191 KVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFFANPQ 322
Score = 108 bits (231), Expect(2) = 9e-030
Identities = 59/97 (60%), Positives = 62/97 (63%)
Frame = +2 / -3
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T APL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 303 GLTKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 124
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
ST D VSIAL EAYRG T GP RTS L +TL+K
Sbjct: 123 ST*DLVSIALIEAYRG*TRLTTGPERTSKFLRRTLKK 13
Score = 59.3 bits (123), Expect(2) = 2e-060
Identities = 23/46 (50%), Positives = 34/46 (73%)
Frame = -3 / +2
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKSSNPRRSILEE 418
KKD S+PDDV++AA++YIE+NG+ AFE L+ K KS + + +E
Sbjct: 353 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGKSKSSGYTFYDE 490
Score = 42.3 bits (86), Expect(2) = 9e-030
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / -3
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L L+ FS A PF SMY AA TSSGLL +SFF
Sbjct: 456 LPLVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSFF 352
>gb|CV246557.1|CV246557 WS01111.B21_B06 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01111_B06 3', mRNA sequence
Length = 767
Score = 198 bits (426), Expect(2) = 2e-060
Identities = 75/104 (72%), Positives = 88/104 (84%)
Frame = -3 / -1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLKVL+ N DVLAGP++SL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 731 SFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 552
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
V+EW+P W +AKL CWLV+P F+GAA+VYE+FVRP N Q
Sbjct: 551 KVIEWIPIWPFAKLILTCWLVVPYFSGAAYVYENFVRPFYANPQ 420
Score = 115 bits (246), Expect(2) = 4e-031
Identities = 62/107 (57%), Positives = 67/107 (62%)
Frame = +2 / +1
Query: 569 MFTTC*FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEY 748
+ +C GLTK S T AAPL G TNQQ+K SFA Q G HS T AKVSS RVI E
Sbjct: 409 LMVSCGLA*KGLTKFS*T*AAPLKYGTTNQQVKMSFANGQIGIHSMTLAKVSSKRVIME* 588
Query: 749 STQYVSHC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
Q VSHC SST DFVSIAL EAYRG GPARTS +T +K
Sbjct: 589 RIQ*VSHCLSST*DFVSIALIEAYRG*TRLITGPARTSKFSRRTFKK 729
Score = 55.6 bits (115), Expect(2) = 2e-060
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -3 / -1
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKS 448
KKD S+PDDV+SAA++YIE++G+ AFE L+ K KS
Sbjct: 389 KKDIFSKPDDVLSAAEKYIEEDGTYAFEKLITKDKS 282
Score = 40.0 bits (81), Expect(2) = 4e-031
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +2 / +1
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L+L+ FS A P SMY AA+ TSSGLL SFF
Sbjct: 286 LSLVMSFSKA*VPSSSMYFSAADRTSSGLLKISFF 390
>gb|CA825212.1|CA825212 R55B12 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 550
Score = 194 bits (419), Expect(2) = 1e-059
Identities = 73/104 (70%), Positives = 86/104 (82%)
Frame = -3 / +1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SF KVL+ N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 100 SFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 279
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
V+EW+P W YA+L CWLV+P F+GA +VYE+FVRP N Q
Sbjct: 280 KVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFFANPQ 411
Score = 108 bits (230), Expect(2) = 1e-029
Identities = 58/97 (59%), Positives = 62/97 (63%)
Frame = +2 / -3
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T APL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 392 GLTKFS*TYVAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 213
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
ST D VSIAL +AYRG T GP RTS L +TL+K
Sbjct: 212 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKK 102
Score = 56.1 bits (116), Expect(2) = 1e-059
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = -3 / +1
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFK 451
KKD S+PDDV++AA++YIE+NG+ AFE L+ K K
Sbjct: 442 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGK 546
Score = 42.3 bits (86), Expect(2) = 1e-029
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / -3
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L L+ FS A PF SMY AA TSSGLL +SFF
Sbjct: 545 LPLVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSFF 441
>gb|CK098220.1|CK098220 A008P12.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A008P12 5', mRNA sequence
Length = 547
Score = 191 bits (411), Expect(2) = 2e-059
Identities = 71/102 (69%), Positives = 85/102 (83%)
Frame = -3 / +1
Query: 885 LKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPV 706
+KVL+ N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA V
Sbjct: 19 IKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKV 198
Query: 705 LEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
+EW+P W YA+L CWLV+P F+GA +VYE+FVRP N Q
Sbjct: 199 IEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFFANPQ 324
Score = 105 bits (224), Expect(2) = 8e-029
Identities = 58/95 (61%), Positives = 60/95 (63%)
Frame = +2 / -3
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T APL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 305 GLTKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 126
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTKTL 883
ST D VSIAL EAYRG T GP RTS L +TL
Sbjct: 125 ST*DLVSIALIEAYRG*TRLTTGPERTSKFLRRTL 21
Score = 59.3 bits (123), Expect(2) = 2e-059
Identities = 23/46 (50%), Positives = 34/46 (73%)
Frame = -3 / +1
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKSSNPRRSILEE 418
KKD S+PDDV++AA++YIE+NG+ AFE L+ K KS + + +E
Sbjct: 355 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGKSKSSGYTFYDE 492
Score = 42.3 bits (86), Expect(2) = 8e-029
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / -3
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L L+ FS A PF SMY AA TSSGLL +SFF
Sbjct: 458 LPLVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSFF 354
>gb|DT489931.1|DT489931 WS02543.B21_J08 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02543_J08 3', mRNA sequence
Length = 819
Score = 184 bits (397), Expect(2) = 4e-057
Identities = 68/98 (69%), Positives = 82/98 (83%)
Frame = -3 / -2
Query: 873 VNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLEWL 694
+ N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA V+EW+
Sbjct: 818 LKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVIEWI 639
Query: 693 PFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
P W YA+L CWLV+P F+GA++VYE+FVRP N Q
Sbjct: 638 PIWPYARLILTCWLVIPYFSGASYVYENFVRPFFANPQ 525
Score = 100 bits (212), Expect(2) = 3e-027
Identities = 55/91 (60%), Positives = 57/91 (62%)
Frame = +2 / +1
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T APL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 544 GLTKFS*TYEAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 723
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLL 871
ST D VSIAL +AYRG T GP RTS L
Sbjct: 724 ST*DLVSIALIDAYRG*TRLTTGPERTSKFL 816
Score = 57.9 bits (120), Expect(2) = 4e-057
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -3 / -2
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKS 448
KKD S+PDDV++AA++YIE+NG+ AFE L+ K KS
Sbjct: 494 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGKS 387
Score = 42.3 bits (86), Expect(2) = 3e-027
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / +1
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L L+ FS A PF SMY AA TSSGLL +SFF
Sbjct: 391 LPLVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSFF 495
>gb|CB239680.1|CB239680 RSH15C07 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 579
Score = 186 bits (401), Expect(2) = 8e-057
Identities = 69/101 (68%), Positives = 83/101 (82%)
Frame = -3 / +3
Query: 882 KVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVL 703
+ + N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA V+
Sbjct: 138 RFFLRNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVI 317
Query: 702 EWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
EW+P W YA+L CWLV+P F+GAA+VYE+FVRP N Q
Sbjct: 318 EWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 440
Score = 106 bits (226), Expect(2) = 4e-029
Identities = 58/97 (59%), Positives = 61/97 (62%)
Frame = +2 / -3
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T AAPL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 421 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 242
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
ST D VSIAL +AYRG T GP RTS L K L +
Sbjct: 241 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLKKNLEE 131
Score = 55.1 bits (114), Expect(2) = 8e-057
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = -3 / +3
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKS 448
KKD S+PDDV++AA++YIE+NG+ AFE L+ KS
Sbjct: 471 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITXGKS 578
Score = 42.3 bits (86), Expect(2) = 4e-029
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / -3
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L L+ FS A PF SMY AA TSSGLL +SFF
Sbjct: 574 LPLVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSFF 470
>gb|CV236388.1|CV236388 WS01223.B21_O18 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01223_O18 3', mRNA sequence
Length = 818
Score = 182 bits (393), Expect(2) = 1e-056
Identities = 68/94 (72%), Positives = 80/94 (85%)
Frame = -3 / -1
Query: 861 DVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLEWLPFWS 682
DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA V+EW+P W
Sbjct: 818 DVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVIEWIPIWP 639
Query: 681 YAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
YA+L CWLV+P F+GAA+VYE+FVRP N Q
Sbjct: 638 YARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 537
Score = 99.1 bits (210), Expect(2) = 7e-027
Identities = 54/87 (62%), Positives = 56/87 (64%)
Frame = +2 / +1
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T AAPL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 556 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 735
Query: 779 STADFVSIALTEAYRGYASETKGPART 859
ST D VSIAL +AYRG T GP RT
Sbjct: 736 ST*DLVSIALIDAYRG*TRLTTGPERT 816
Score = 57.9 bits (120), Expect(2) = 1e-056
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -3 / -1
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKS 448
KKD S+PDDV++AA++YIE+NG+ AFE L+ K KS
Sbjct: 506 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGKS 399
Score = 42.3 bits (86), Expect(2) = 7e-027
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / +1
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L L+ FS A PF SMY AA TSSGLL +SFF
Sbjct: 403 LPLVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSFF 507
>gb|AI161908.1|AI161908 A009P39U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 505
Score = 190 bits (409), Expect(2) = 1e-055
Identities = 71/101 (70%), Positives = 84/101 (83%)
Frame = -3 / +3
Query: 882 KVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVL 703
KVL+ N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA V+
Sbjct: 3 KVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVI 182
Query: 702 EWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
EW+P W YA+L CWLV+P F+GA +VYE+FVRP N Q
Sbjct: 183 EWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFFANPQ 305
Score = 105 bits (224), Expect(2) = 5e-027
Identities = 58/95 (61%), Positives = 60/95 (63%)
Frame = +2 / -1
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T APL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 286 GLTKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 107
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTKTL 883
ST D VSIAL EAYRG T GP RTS L +TL
Sbjct: 106 ST*DLVSIALIEAYRG*TRLTTGPERTSKFLRRTL 2
Score = 47.3 bits (97), Expect(2) = 1e-055
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = -3 / +3
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAF 475
KKD S+PDDV++AA++YIE+NG+ AF
Sbjct: 336 KKDVFSKPDDVLTAAEKYIEENGTSAF 416
Score = 36.3 bits (73), Expect(2) = 5e-027
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2 / -1
Query: 488 PFCSMYLCAAEITSSGLLDSSFF 556
PF SMY AA TSSGLL +SFF
Sbjct: 403 PFSSMYFSAAVRTSSGLLKTSFF 335
>gb|CF231938.1|CF231938 PtaC0027F12F1212 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 571
Score = 190 bits (409), Expect(3) = 3e-055
Identities = 71/98 (72%), Positives = 84/98 (85%)
Frame = -3 / +1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SF KVL+ N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 124 SFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 303
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRP 598
V+EW+P W YA+L CWLV+P F+GA +VYE+FVRP
Sbjct: 304 KVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRP 417
Score = 108 bits (231), Expect(2) = 6e-026
Identities = 59/97 (60%), Positives = 62/97 (63%)
Frame = +2 / -3
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T APL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 416 GLTKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 237
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
ST D VSIAL EAYRG T GP RTS L +TL+K
Sbjct: 236 ST*DLVSIALIEAYRG*TRLTTGPERTSKFLRRTLKK 126
Score = 35.9 bits (72), Expect(3) = 3e-055
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = -3 / +2
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAF 475
KKD S+P+ V++AA +YIE G+ AF
Sbjct: 467 KKDVFSKPNXVLTAAXKYIEXXGTSAF 547
Score = 29.5 bits (58), Expect(2) = 6e-026
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +2 / -2
Query: 470 FSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
F A P SMY AA T GLL +SFF
Sbjct: 552 FXKAEVPXFSMYXSAAVRTXFGLLKTSFF 466
Score = 29.0 bits (57), Expect(3) = 3e-055
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -3 / +2
Query: 585 QQVVNIWYIPKKDE 544
QQ +NIWY+P+K +
Sbjct: 434 QQTLNIWYVPRKKD 475
>gb|BU820620.1|BU820620 UB12CPB07 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 504
Score = 174 bits (374), Expect(2) = 3e-054
Identities = 64/90 (71%), Positives = 75/90 (83%)
Frame = -3 / +2
Query: 849 GPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLEWLPFWSYAKL 670
GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA V+EW+P W YA+L
Sbjct: 29 GPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVIEWIPIWPYARL 208
Query: 669 FFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
CWLV+P F+GA +VYE+FVRP N Q
Sbjct: 209 ILTCWLVIPYFSGATYVYENFVRPFFANPQ 298
Score = 97.3 bits (206), Expect(2) = 2e-026
Identities = 54/93 (58%), Positives = 57/93 (61%)
Frame = +2 / -1
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T APL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 279 GLTKFS*TYVAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 100
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTK 877
ST D VSIAL EAYRG T GP + +L K
Sbjct: 99 ST*DLVSIALIEAYRG*TRLTTGPRKNIEVLKK 1
Score = 58.8 bits (122), Expect(2) = 3e-054
Identities = 23/46 (50%), Positives = 34/46 (73%)
Frame = -3 / +2
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKSSNPRRSILEE 418
KKD S+PDDV++AA++YIE+NG+ AFE L+ K KS + + +E
Sbjct: 329 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGKSKSSGYTCYDE 466
Score = 42.3 bits (86), Expect(2) = 2e-026
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L L+ FS A PF SMY AA TSSGLL +SFF
Sbjct: 432 LPLVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSFF 328
>gb|AI162294.1|AI162294 A015P38U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 566
Score = 187 bits (402), Expect(3) = 7e-053
Identities = 70/97 (72%), Positives = 83/97 (85%)
Frame = -3 / +1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SF KVL+ N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 88 SFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 267
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVR 601
V+EW+P W YA+L CWLV+P F+GA +VYE+FVR
Sbjct: 268 KVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVR 378
Score = 105 bits (225), Expect(2) = 3e-023
Identities = 58/96 (60%), Positives = 61/96 (63%)
Frame = +2 / -1
Query: 602 LTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*SS 781
LTK S T APL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC SS
Sbjct: 377 LTKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLSS 198
Query: 782 TADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
T D VSIAL EAYRG T GP RTS L +TL+K
Sbjct: 197 T*DLVSIALIEAYRG*TRLTTGPERTSKFLRRTLKK 90
Score = 30.9 bits (61), Expect(3) = 7e-053
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3 / +3
Query: 585 QQVVNIWYIPKKDESS 538
QQ +NIWY+P+K SS
Sbjct: 396 QQTLNIWYVPRKKVSS 443
Score = 29.0 bits (57), Expect(3) = 7e-053
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = -3 / +2
Query: 555 KKDESSRPDDVISAAQRYIEQ 493
K+ S+PDDV++AA++Y E+
Sbjct: 428 KEGVFSKPDDVLTAAEKYTER 490
Score = 23.1 bits (44), Expect(2) = 3e-023
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -3
Query: 497 SMYLCAAEITSSGLLDSSFF 556
S+Y AA TSSGLL + F
Sbjct: 486 SVYFSAAVRTSSGLLKTPSF 427
>gb|CV238776.1|CV238776 WS0128.B21.1_A07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0128_A07 3', mRNA sequence
Length = 661
Score = 169 bits (364), Expect(2) = 1e-052
Identities = 63/87 (72%), Positives = 73/87 (83%)
Frame = -3 / -1
Query: 840 VSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLEWLPFWSYAKLFFN 661
VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA V+EW+P W YA+L
Sbjct: 661 VSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVIEWIPIWPYARLILT 482
Query: 660 CWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
CWLV+P F+GAA+VYE+FVRP N Q
Sbjct: 481 CWLVIPYFSGAAYVYENFVRPFFANPQ 401
Score = 90.9 bits (192), Expect(2) = 2e-024
Identities = 49/76 (64%), Positives = 51/76 (67%)
Frame = +2 / +3
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T AAPL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 420 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 599
Query: 779 STADFVSIALTEAYRG 826
ST D VSIAL +AYRG
Sbjct: 600 ST*DLVSIALIDAYRG 647
Score = 57.9 bits (120), Expect(2) = 1e-052
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -3 / -1
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKS 448
KKD S+PDDV++AA++YIE+NG+ AFE L+ K KS
Sbjct: 370 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGKS 263
Score = 42.3 bits (86), Expect(2) = 2e-024
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / +3
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L L+ FS A PF SMY AA TSSGLL +SFF
Sbjct: 267 LPLVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSFF 371
>gb|DT475725.1|DT475725 WS0128.BR_A07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0128_A07 5', mRNA sequence
Length = 574
Score = 196 bits (423), Expect(2) = 3e-052
Identities = 74/104 (71%), Positives = 87/104 (83%)
Frame = -3 / +1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SF KVL+ N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 187 SFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 366
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
V+EW+P W YA+L CWLV+P F+GAA+VYE+FVRP N Q
Sbjct: 367 KVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 498
Score = 110 bits (234), Expect(2) = 1e-024
Identities = 59/97 (60%), Positives = 63/97 (64%)
Frame = +2 / -3
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T AAPL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC S
Sbjct: 479 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 300
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
ST D VSIAL +AYRG T GP RTS L +TL+K
Sbjct: 299 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKK 189
Score = 29.5 bits (58), Expect(2) = 3e-052
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3 / +1
Query: 585 QQVVNIWYIPKKDESSRPDDVISAA 511
QQ +NIWY+P+K + D + A
Sbjct: 496 QQTLNIWYVPRKKDVFSKPDDVLTA 570
Score = 24.0 bits (46), Expect(2) = 1e-024
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2 / -3
Query: 512 AAEITSSGLLDSSFF 556
AA TSSGLL +SFF
Sbjct: 572 AAVRTSSGLLKTSFF 528
>gb|DT499923.1|DT499923 WS9991.BR_L17 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01111_B06 5', mRNA sequence
Length = 483
Score = 196 bits (422), Expect = 3e-049
Identities = 74/102 (72%), Positives = 87/102 (85%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLKVL+ N DVLAGP++SL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 177 SFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 356
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
V+EW+P W +AKL CWLV+P F+GAA+VYE+FVRP N
Sbjct: 357 KVIEWIPIWPFAKLILTCWLVVPYFSGAAYVYENFVRPFYAN 482
Score = 115 bits (245), Expect = 7e-025
Identities = 61/97 (62%), Positives = 64/97 (65%)
Frame = +2 / -3
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLTK S T AAPL G TNQQ+K SFA Q G HS T AKVSS RVI E Q VSHC S
Sbjct: 469 GLTKFS*T*AAPLKYGTTNQQVKMSFANGQIGIHSMTLAKVSSKRVIME*RIQ*VSHCLS 290
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
ST DFVSIAL EAYRG GPARTS +T +K
Sbjct: 289 ST*DFVSIALIEAYRG*TRLITGPARTSKFSRRTFKK 179
>gb|BU871910.1|BU871910 Q036A01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 407
Score = 190 bits (410), Expect = 1e-047
Identities = 72/104 (69%), Positives = 87/104 (83%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLKVL+ N DVLAGP++SL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 81 SFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 260
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
++EW+P W +AKL CWLV+P F+GAA+V+E+ VRP N Q
Sbjct: 261 KLIEWIPIWPFAKLILTCWLVVPYFSGAAYVHENSVRPFYANPQ 392
Score = 112 bits (239), Expect = 5e-024
Identities = 59/97 (60%), Positives = 64/97 (65%)
Frame = +2 / -2
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*S 778
GLT+ S T AAPL G TNQQ+K SFA Q G HS + AKVSS RVI E Q VSHC S
Sbjct: 373 GLTEFS*TYAAPLKYGTTNQQVKMSFANGQIGIHSMSLAKVSSKRVIME*RIQ*VSHCLS 194
Query: 779 STADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
ST DFVSIAL EAYRG GPARTS +T +K
Sbjct: 193 ST*DFVSIALIEAYRG*TRLITGPARTSKFSRRTFKK 83
>gb|BU824497.1|BU824497 UB65DPA03 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 624
Score = 96.4 bits (204), Expect(4) = 2e-046
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = -3 / +1
Query: 738 ITLFELTFAPVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
ITLFELTFA V+EW+P W YA+L CWLV+P F+GA +VYE+FVRP N Q
Sbjct: 280 ITLFELTFAKVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFFANPQ 438
Score = 57.4 bits (119), Expect(4) = 2e-046
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = -3 / +1
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKSSNPRRSILEE 418
KKD S+PDDV++AA+RYIE+NG+ AFE L+ KS + + +E
Sbjct: 469 KKDVFSKPDDVLTAAERYIEENGTTAFEKLITNGKSKSSGYTXYDE 606
Score = 46.0 bits (94), Expect(4) = 2e-046
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = -3 / +3
Query: 801 IETKSAVDDQQWLTYWVLYS 742
++TKS VDD+QWLTYW+LYS
Sbjct: 216 LQTKSHVDDKQWLTYWILYS 275
Score = 43.7 bits (89), Expect(4) = 2e-046
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -3 / +1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPL 820
SF KVL+ N DVL+GP+VSL YPL
Sbjct: 124 SFFKVLLKNFDVLSGPVVSLVYPL 195
>gb|BI128260.1|BI128260 G073P32Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 421
Score = 184 bits (397), Expect = 7e-046
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SF KVL+ N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITL ELTFA
Sbjct: 114 SFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLLELTFA 293
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMI 592
V+EW+P W YA+L CWLV+P F+GA +VYE+FVR +
Sbjct: 294 KVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRTFL 413
Score = 105 bits (225), Expect = 4e-022
Identities = 58/96 (60%), Positives = 61/96 (63%)
Frame = +2 / -1
Query: 602 LTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*SS 781
LTK S T APL G TNQQ+K S A Q G HS T AKVSS VI E Q VSHC SS
Sbjct: 403 LTKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLSS 224
Query: 782 TADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
T D VSIAL EAYRG T GP RTS L +TL+K
Sbjct: 223 T*DLVSIALIEAYRG*TRLTTGPERTSKFLRRTLKK 116
>gb|AI164764.1|AI164764 A068P40U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 424
Score = 156 bits (335), Expect(3) = 4e-045
Identities = 58/79 (73%), Positives = 67/79 (84%)
Frame = -3 / +1
Query: 888 FLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAP 709
F KVL+ N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 1 FFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAK 180
Query: 708 VLEWLPFWSYAKLFFNCWL 652
V+EW+P W YA+L CWL
Sbjct: 181 VIEWIPIWPYARLILTCWL 237
Score = 38.6 bits (78), Expect(3) = 4e-045
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -3 / +3
Query: 666 FNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
F+ + +P F+GA +VYE+FVRP N Q
Sbjct: 222 FDLLVGIPYFSGATYVYENFVRPFFANPQ 308
Score = 25.8 bits (50), Expect(3) = 4e-045
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3 / +3
Query: 585 QQVVNIWYIPKKDESSRPDDV 523
QQ +NIW ++ +PDDV
Sbjct: 306 QQTLNIWXAQERRMLQQPDDV 368
>gb|CK088432.1|CK088432 A052P67.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A052P67 3', mRNA sequence
Length = 663
Score = 84.5 bits (178), Expect(3) = 3e-043
Identities = 29/48 (60%), Positives = 37/48 (77%)
Frame = -3 / -2
Query: 723 LTFAPVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
LTFA ++EW+P W +AKL CWLV+P F+GAA+VYE+FVRP N Q
Sbjct: 569 LTFAKLIEWIPIWPFAKLILTCWLVVPYFSGAAYVYENFVRPFYANPQ 426
Score = 68.4 bits (143), Expect(3) = 3e-043
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3 / -1
Query: 816 ASVRAIETKSAVDDQQWLTYWVLYSFITLFE 724
AS+RAIETKS VDD+QWLTYW+LYS ITLFE
Sbjct: 663 ASIRAIETKSHVDDKQWLTYWILYSMITLFE 571
Score = 61.6 bits (128), Expect(3) = 3e-043
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = -3 / -2
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKSSNPRR 433
KKD S+PDDV+SAA++YIE+NG+ AFE L+ K KS RR
Sbjct: 395 KKDIFSKPDDVLSAAEKYIEENGTYAFEKLITKDKSRRSRR 273
Score = 52.8 bits (109), Expect(3) = 9e-022
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = +2 / +1
Query: 599 GLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVS 724
GLTK S T AAPL G TNQQ+K SFA Q G HS + AKVS
Sbjct: 445 GLTKFS*TYAAPLKYGTTNQQVKMSFANGQIGIHSMSLAKVS 570
Score = 45.1 bits (92), Expect(3) = 9e-022
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1 / +1
Query: 712 SKGELE*SDK*VQHPVREPLLIIHSRFCFNCSNRG 816
+K L+ SD +++PV +PLLIIH RFC +C N G
Sbjct: 559 AKVSLKESDHGIKNPVSKPLLIIHMRFCLDCPN*G 663
Score = 43.7 bits (89), Expect(3) = 9e-022
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = +2 / +1
Query: 452 LNLLTRFSNAFDPFCSMYLCAAEITSSGLLDSSFF 556
L+L+ FS A PF SMY AA+ TSSGLL SFF
Sbjct: 292 LSLVMSFSKA*VPFSSMYFSAADKTSSGLLKISFF 396
>gb|CK099512.1|CK099512 A071P32.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A071P32 5', mRNA sequence
Length = 384
Score = 161 bits (346), Expect = 8e-039
Identities = 60/83 (72%), Positives = 71/83 (85%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLKVL+ N DVLAGP++SL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 132 SFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 311
Query: 711 PVLEWLPFWSYAKLFFNCWLVLP 643
++EW+P W +AKL CWL +P
Sbjct: 312 KLIEWIPIWPFAKLILTCWLGVP 380
>gb|CK116853.1|CK116853 B018P72 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B018P72 5', mRNA sequence
Length = 482
Score = 139 bits (299), Expect(2) = 5e-033
Identities = 53/69 (76%), Positives = 61/69 (88%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SF KVL+ N DVL+GP+VSL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 99 SFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 278
Query: 711 PVLEWLPFW 685
V+EW+P W
Sbjct: 279 KVIEWIPIW 305
Score = 22.1 bits (42), Expect(2) = 5e-033
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3 / +2
Query: 684 SYAKLFFNCWL 652
+YA+L CWL
Sbjct: 305 AYARLILTCWL 337
>gb|AI164945.1|AI164945 A071P32U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 342
Score = 136 bits (291), Expect = 3e-031
Identities = 52/67 (77%), Positives = 61/67 (91%)
Frame = -3 / +2
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLKVL+ N DVLAGP++SL YPLYAS+RAIETKS VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 89 SFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFA 268
Query: 711 PVLEWLP 691
++EW+P
Sbjct: 269 KLIEWIP 289
>gb|CF228071.1|CF228071 PtaXM0008D2D0208 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 681
Score = 133 bits (286), Expect = 1e-030
Identities = 53/100 (53%), Positives = 68/100 (68%)
Frame = -3 / +2
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
S L + ++ ++GP++ L YPLYASV AIE+ S DD+QWL YW+LYSF+TL E+
Sbjct: 113 SRLLTFLTHVHTISGPVLMLLYPLYASVVAIESPSREDDKQWLAYWILYSFLTLTEMLLQ 292
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMI 592
+LEW+P W KL WLVLPQF GAA VYE +VR I
Sbjct: 293 SLLEWIPIWYSLKLVLAAWLVLPQFKGAAFVYERYVREHI 412
>gb|DT481964.1|DT481964 WS02533.BR_H16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_H16 5', mRNA sequence
Length = 731
Score = 133 bits (285), Expect = 2e-030
Identities = 52/98 (53%), Positives = 67/98 (68%)
Frame = -3 / -1
Query: 885 LKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPV 706
L + ++ ++GP++ L YPLYASV AIE+ S DD+QWL YW+LYSF+TL E+ +
Sbjct: 632 LLTFLTHVHTISGPVLMLLYPLYASVVAIESPSREDDKQWLAYWILYSFLTLTEMLLQSL 453
Query: 705 LEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMI 592
LEW+P W KL WLVLPQF GAA VYE +VR I
Sbjct: 452 LEWIPIWYSLKLVLAAWLVLPQFKGAAFVYERYVREHI 339
>gb|DT487357.1|DT487357 WS02533.B21_H16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_H16 3', mRNA sequence
Length = 745
Score = 133 bits (285), Expect = 2e-030
Identities = 52/98 (53%), Positives = 67/98 (68%)
Frame = -3 / +3
Query: 885 LKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPV 706
L + ++ ++GP++ L YPLYASV AIE+ S DD+QWL YW+LYSF+TL E+ +
Sbjct: 114 LLTFLTHVHTISGPVLMLLYPLYASVVAIESPSREDDKQWLAYWILYSFLTLTEMLLQSL 293
Query: 705 LEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMI 592
LEW+P W KL WLVLPQF GAA VYE +VR I
Sbjct: 294 LEWIPIWYSLKLVLAAWLVLPQFKGAAFVYERYVREHI 407
>gb|CF234811.1|CF234811 PtaJXT0015D8D0808 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 752
Score = 127 bits (272), Expect = 1e-028
Identities = 52/100 (52%), Positives = 67/100 (67%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
S L + ++ ++GP++ L YPLYASV AIE+ S DD+QWL Y +LYSF+TL E+
Sbjct: 114 SRLLTFLTHVHTISGPVLMLLYPLYASVVAIESPSREDDKQWLAYRILYSFLTLTEMLLQ 293
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMI 592
+LEW+P W KL WLVLPQF GAA VYE +VR I
Sbjct: 294 SLLEWIPIWYSLKLVLAAWLVLPQFKGAAFVYERYVREHI 413
>gb|CV230612.1|CV230612 WS0192.B21_B13 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0192_B13 3', mRNA sequence
Length = 688
Score = 115 bits (246), Expect = 5e-025
Identities = 47/84 (55%), Positives = 56/84 (66%)
Frame = -3 / +3
Query: 843 LVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLEWLPFWSYAKLFF 664
L+ L YASV AIE+ S DD+QWL YW+LYSF+TL E+ +LEW+P W KL
Sbjct: 117 LIVLLVNRYASVVAIESPSREDDKQWLAYWILYSFLTLTEMLLQSLLEWIPIWYSLKLVL 296
Query: 663 NCWLVLPQFNGAAHVYEHFVRPMI 592
WLVLPQF GAA VYE +VR I
Sbjct: 297 AAWLVLPQFKGAAFVYERYVREHI 368
>gb|DN483755.1|DN483755 PSO202G05 Populus tomentiglandulosa T. Lee cDNA library Populus
tomentiglandulosa cDNA, mRNA sequence
Length = 602
Score = 74.4 bits (156), Expect(2) = 3e-024
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = -3 / +1
Query: 705 LEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQ 580
L W+P W +AKL CWLV+P F+GAA+VYE+FVRP N Q
Sbjct: 28 LRWIPIWPFAKLILTCWLVVPYFSGAAYVYENFVRPFYANPQ 153
Score = 57.9 bits (120), Expect(2) = 3e-024
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = -3 / +1
Query: 555 KKDESSRPDDVISAAQRYIEQNGSKAFENLVNKFKS 448
KKD S+PDDV+SAA++YIE+NG+ AFE L+ K KS
Sbjct: 184 KKDIFSKPDDVLSAAEKYIEENGTYAFEKLITKDKS 291
>gb|AI162392.1|AI162392 A016P78U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 395
Score = 69.3 bits (145), Expect(2) = 6e-023
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -3 / +2
Query: 768 WLTYWVLYSFITLFELTFAPVLEWLPFWSYAKLF 667
WLTYW+LYS ITLFELTFA ++EW+P W +A F
Sbjct: 275 WLTYWILYSMITLFELTFAKLIEWIPIWPFATPF 376
Score = 58.8 bits (122), Expect(2) = 6e-023
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = -3 / +2
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRA 802
SFLKVL+ N DVLAGP++SL YPLYAS+RA
Sbjct: 155 SFLKVLLENFDVLAGPVISLVYPLYASIRA 244
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 537,160,712
Number of Sequences: 369679
Number of extensions: 7746515
Number of successful extensions: 45257
Number of sequences better than 1.0e-020: 45
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 15716427726
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)