TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716368.2.1
(1356 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT518564.1|DT518564 WS02438.B21_I18 PTxD-ICC-N-A-14 Popu... 148 3e-071
gb|DT512363.1|DT512363 WS02419.B21_B06 PTxD-ICC-N-A-14 Popu... 148 3e-071
gb|DT517819.1|DT517819 WS02435.B21_G10 PTxD-ICC-N-A-14 Popu... 148 3e-071
gb|CV260564.1|CV260564 WS02014.B21_G14 PTxN-IB-N-A-11 Popul... 148 8e-071
gb|CV257933.1|CV257933 WS0248.B21_A20 PTxD-ICC-N-A-14 Popul... 148 4e-070
gb|DT507734.1|DT507734 WS02419.BR_B06 PTxD-ICC-N-A-14 Popul... 146 5e-060
gb|CV259723.1|CV259723 WS02012.B21_B17 PTxN-IB-N-A-11 Popul... 148 2e-057
gb|BU815039.1|BU815039 N036D09 Populus bark cDNA library Po... 210 1e-054
gb|CX659519.1|CX659519 PO01031F07 Poplar SC cDNA library Po... 154 6e-053
gb|CX654042.1|CX654042 PO02012B10 Poplar SC cDNA library Po... 137 3e-051
gb|CV258295.1|CV258295 WS0249.B21_B24 PTxD-ICC-N-A-14 Popul... 147 5e-051
gb|CX657368.1|CX657368 PO02043E09 Poplar SC cDNA library Po... 127 2e-048
gb|CX654872.1|CX654872 PO02060H08 Poplar SC cDNA library Po... 126 5e-048
gb|BU893439.1|BU893439 P077G06 Populus petioles cDNA librar... 192 6e-048
gb|CX654070.1|CX654070 PO02012F04 Poplar SC cDNA library Po... 113 3e-044
gb|CV270280.1|CV270280 WS0151.B21_J04 PTxN-IB-A-6 Populus t... 172 5e-042
gb|BU895814.1|BU895814 X031D08 Populus wood cDNA library Po... 154 1e-036
gb|CX655588.1|CX655588 PO02036H10 Poplar SC cDNA library Po... 114 6e-036
gb|BI138921.1|BI138921 F119P23Y Populus flower cDNA library... 145 7e-034
gb|BU889222.1|BU889222 P018B12 Populus petioles cDNA librar... 124 1e-027
gb|BU884348.1|BU884348 R009D12 Populus root cDNA library Po... 92 3e-024
gb|CV261587.1|CV261587 WS02017.B21_D05 PTxN-IB-N-A-11 Popul... 111 8e-024
gb|CV259500.1|CV259500 WS02011.B21_I10 PTxN-IB-N-A-11 Popul... 54 2e-023
gb|AJ775814.1|AJ775814 AJ775814 Populus euphratica root 3-6... 106 1e-022
gb|CA926336.1|CA926336 MTU6CR.P13.G12 Aspen root cDNA Libra... 107 1e-022
gb|CA934186.1|CA934186 MTU3TS.P4.C06 Aspen stem cDNA Librar... 107 1e-022
gb|BU890573.1|BU890573 P038G06 Populus petioles cDNA librar... 105 9e-022
>gb|DT518564.1|DT518564 WS02438.B21_I18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02438_I18 3', mRNA sequence
Length = 905
Score = 148 bits (318), Expect(4) = 3e-071
Identities = 59/106 (55%), Positives = 77/106 (72%)
Frame = -1 / -1
Query: 840 TTNAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILY 661
++NAACSG PVT+VITDQ PG E HFD+SGTA GAMA G D+LR GVL+I +
Sbjct: 671 SSNAACSGNPVTVVITDQCPGSPCAQESFHFDLSGTAFGAMAISGKEDQLRNAGVLQIQH 492
Query: 660 RRVPCKYTGVNIAFKVDQGANPYYFDVLIEFEDDDGDLSAVDLMEA 523
+RVPC + G + F VD G+NPYYF ++E+ED DG+L +V+L +A
Sbjct: 491 QRVPCNWPGKTVTFHVDSGSNPYYFATVVEYEDGDGELKSVELKQA 354
Score = 85.4 bits (180), Expect(4) = 3e-071
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = -1 / -1
Query: 978 GDGSDGGACGYQTAVGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNA 829
G GSDGGACGY AV + PF S I+AG +Y+ G+GCGACY+VKCT+++
Sbjct: 815 GAGSDGGACGYGNAVEQAPFSSFISAGGDSIYKSGQGCGACYQVKCTSSS 666
Score = 83.1 bits (175), Expect(2) = 3e-021
Identities = 45/82 (54%), Positives = 49/82 (59%)
Frame = +2 / +1
Query: 587 K*YGFAP*STLNAMLTPVYLHGTLLYRILSTPPARSLSAMPGRAMAPMAVPLMSKCSTSP 766
K* GF P ST + P LHGTL I TP RS S++P AMAP AVPL SK S
Sbjct: 418 K**GFDPESTWKVTVLPGQLHGTL*C*ICKTPALRS*SSLPDIAMAPKAVPLKSK*KDSW 597
Query: 767 GNSPPGDWSVITMVTGWPEHAA 832
PG SVIT VTG+PEHAA
Sbjct: 598 AQGLPGH*SVITTVTGFPEHAA 663
Score = 47.3 bits (97), Expect(4) = 3e-071
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1 / -1
Query: 519 SGVWTPMAHNWGATWRLNNGRKLKAPFGLRLTS 421
S W PM +WGA W+L+ G L+AP ++LTS
Sbjct: 347 SDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 249
Score = 46.0 bits (94), Expect(4) = 3e-071
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -1 / -1
Query: 420 DSRRVLVANNAIPAAWKPGKTYRSLVNY 337
+S + +VA+ IPA W PG+TYRSLVN+
Sbjct: 245 ESGKTIVASGVIPAGWAPGQTYRSLVNF 162
Score = 39.6 bits (80), Expect(2) = 3e-021
Identities = 21/36 (58%), Positives = 21/36 (58%)
Frame = +2 / +1
Query: 833 LVVHFTS*QAPQPSPPLYSGVLPAAIIESNGFFPTA 940
L VHFT *QAP P P LY PA I E NG TA
Sbjct: 670 LDVHFT**QAPHPWPDLYIESPPADINEENGACSTA 777
>gb|DT512363.1|DT512363 WS02419.B21_B06 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02419_B06 3', mRNA sequence
Length = 837
Score = 148 bits (318), Expect(4) = 3e-071
Identities = 59/106 (55%), Positives = 77/106 (72%)
Frame = -1 / -2
Query: 840 TTNAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILY 661
++NAACSG PVT+VITDQ PG E HFD+SGTA GAMA G D+LR GVL+I +
Sbjct: 671 SSNAACSGNPVTVVITDQCPGSPCAQESFHFDLSGTAFGAMAISGKEDQLRNAGVLQIQH 492
Query: 660 RRVPCKYTGVNIAFKVDQGANPYYFDVLIEFEDDDGDLSAVDLMEA 523
+RVPC + G + F VD G+NPYYF ++E+ED DG+L +V+L +A
Sbjct: 491 QRVPCNWPGKTVTFHVDSGSNPYYFATVVEYEDGDGELKSVELKQA 354
Score = 85.4 bits (180), Expect(4) = 3e-071
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = -1 / -2
Query: 978 GDGSDGGACGYQTAVGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNA 829
G GSDGGACGY AV + PF S I+AG +Y+ G+GCGACY+VKCT+++
Sbjct: 815 GAGSDGGACGYGNAVEQAPFSSFISAGGDSIYKSGQGCGACYQVKCTSSS 666
Score = 83.1 bits (175), Expect(2) = 3e-021
Identities = 45/82 (54%), Positives = 49/82 (59%)
Frame = +2 / +1
Query: 587 K*YGFAP*STLNAMLTPVYLHGTLLYRILSTPPARSLSAMPGRAMAPMAVPLMSKCSTSP 766
K* GF P ST + P LHGTL I TP RS S++P AMAP AVPL SK S
Sbjct: 418 K**GFDPESTWKVTVLPGQLHGTL*C*ICKTPALRS*SSLPDIAMAPKAVPLKSK*KDSW 597
Query: 767 GNSPPGDWSVITMVTGWPEHAA 832
PG SVIT VTG+PEHAA
Sbjct: 598 AQGLPGH*SVITTVTGFPEHAA 663
Score = 47.3 bits (97), Expect(4) = 3e-071
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1 / -2
Query: 519 SGVWTPMAHNWGATWRLNNGRKLKAPFGLRLTS 421
S W PM +WGA W+L+ G L+AP ++LTS
Sbjct: 347 SDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 249
Score = 46.0 bits (94), Expect(4) = 3e-071
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -1 / -2
Query: 420 DSRRVLVANNAIPAAWKPGKTYRSLVNY 337
+S + +VA+ IPA W PG+TYRSLVN+
Sbjct: 245 ESGKTIVASGVIPAGWAPGQTYRSLVNF 162
Score = 39.6 bits (80), Expect(2) = 3e-021
Identities = 21/36 (58%), Positives = 21/36 (58%)
Frame = +2 / +1
Query: 833 LVVHFTS*QAPQPSPPLYSGVLPAAIIESNGFFPTA 940
L VHFT *QAP P P LY PA I E NG TA
Sbjct: 670 LDVHFT**QAPHPWPDLYIESPPADINEENGACSTA 777
>gb|DT517819.1|DT517819 WS02435.B21_G10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02435_G10 3', mRNA sequence
Length = 831
Score = 148 bits (318), Expect(4) = 3e-071
Identities = 59/106 (55%), Positives = 77/106 (72%)
Frame = -1 / -1
Query: 840 TTNAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILY 661
++NAACSG PVT+VITDQ PG E HFD+SGTA GAMA G D+LR GVL+I +
Sbjct: 651 SSNAACSGNPVTVVITDQCPGSPCAQESFHFDLSGTAFGAMAISGKEDQLRNAGVLQIQH 472
Query: 660 RRVPCKYTGVNIAFKVDQGANPYYFDVLIEFEDDDGDLSAVDLMEA 523
+RVPC + G + F VD G+NPYYF ++E+ED DG+L +V+L +A
Sbjct: 471 QRVPCNWPGKTVTFHVDSGSNPYYFATVVEYEDGDGELKSVELKQA 334
Score = 85.4 bits (180), Expect(4) = 3e-071
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = -1 / -1
Query: 978 GDGSDGGACGYQTAVGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNA 829
G GSDGGACGY AV + PF S I+AG +Y+ G+GCGACY+VKCT+++
Sbjct: 795 GAGSDGGACGYGNAVEQAPFSSFISAGGDSIYKSGQGCGACYQVKCTSSS 646
Score = 83.1 bits (175), Expect(2) = 3e-021
Identities = 45/82 (54%), Positives = 49/82 (59%)
Frame = +2 / +2
Query: 587 K*YGFAP*STLNAMLTPVYLHGTLLYRILSTPPARSLSAMPGRAMAPMAVPLMSKCSTSP 766
K* GF P ST + P LHGTL I TP RS S++P AMAP AVPL SK S
Sbjct: 398 K**GFDPESTWKVTVLPGQLHGTL*C*ICKTPALRS*SSLPDIAMAPKAVPLKSK*KDSW 577
Query: 767 GNSPPGDWSVITMVTGWPEHAA 832
PG SVIT VTG+PEHAA
Sbjct: 578 AQGLPGH*SVITTVTGFPEHAA 643
Score = 47.3 bits (97), Expect(4) = 3e-071
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1 / -1
Query: 519 SGVWTPMAHNWGATWRLNNGRKLKAPFGLRLTS 421
S W PM +WGA W+L+ G L+AP ++LTS
Sbjct: 327 SDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 229
Score = 46.0 bits (94), Expect(4) = 3e-071
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -1 / -1
Query: 420 DSRRVLVANNAIPAAWKPGKTYRSLVNY 337
+S + +VA+ IPA W PG+TYRSLVN+
Sbjct: 225 ESGKTIVASGVIPAGWAPGQTYRSLVNF 142
Score = 39.6 bits (80), Expect(2) = 3e-021
Identities = 21/36 (58%), Positives = 21/36 (58%)
Frame = +2 / +2
Query: 833 LVVHFTS*QAPQPSPPLYSGVLPAAIIESNGFFPTA 940
L VHFT *QAP P P LY PA I E NG TA
Sbjct: 650 LDVHFT**QAPHPWPDLYIESPPADINEENGACSTA 757
>gb|CV260564.1|CV260564 WS02014.B21_G14 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02014_G14 3', mRNA sequence
Length = 893
Score = 148 bits (318), Expect(4) = 8e-071
Identities = 59/106 (55%), Positives = 77/106 (72%)
Frame = -1 / -3
Query: 840 TTNAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILY 661
++NAACSG PVT+VITDQ PG E HFD+SGTA GAMA G D+LR GVL+I +
Sbjct: 723 SSNAACSGNPVTVVITDQCPGSPCAQESFHFDLSGTAFGAMAISGKEDQLRNAGVLQIQH 544
Query: 660 RRVPCKYTGVNIAFKVDQGANPYYFDVLIEFEDDDGDLSAVDLMEA 523
+RVPC + G + F VD G+NPYYF ++E+ED DG+L +V+L +A
Sbjct: 543 QRVPCNWPGKTVTFHVDSGSNPYYFATVVEYEDGDGELKSVELKQA 406
Score = 84.0 bits (177), Expect(4) = 8e-071
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = -1 / -3
Query: 978 GDGSDGGACGYQTAVGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNA 829
G GSDGGACGY AV + PF S I+AG +Y+ G+GCGACY+VKCT+++
Sbjct: 867 GAGSDGGACGYGNAVEQAPFFSFISAGGDSIYKSGQGCGACYQVKCTSSS 718
Score = 83.1 bits (175), Expect(2) = 3e-021
Identities = 45/82 (54%), Positives = 49/82 (59%)
Frame = +2 / +2
Query: 587 K*YGFAP*STLNAMLTPVYLHGTLLYRILSTPPARSLSAMPGRAMAPMAVPLMSKCSTSP 766
K* GF P ST + P LHGTL I TP RS S++P AMAP AVPL SK S
Sbjct: 470 K**GFDPESTWKVTVLPGQLHGTL*C*ICKTPALRS*SSLPDIAMAPKAVPLKSK*KDSW 649
Query: 767 GNSPPGDWSVITMVTGWPEHAA 832
PG SVIT VTG+PEHAA
Sbjct: 650 AQGLPGH*SVITTVTGFPEHAA 715
Score = 47.3 bits (97), Expect(4) = 8e-071
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1 / -3
Query: 519 SGVWTPMAHNWGATWRLNNGRKLKAPFGLRLTS 421
S W PM +WGA W+L+ G L+AP ++LTS
Sbjct: 399 SDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 301
Score = 46.0 bits (94), Expect(4) = 8e-071
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -1 / -3
Query: 420 DSRRVLVANNAIPAAWKPGKTYRSLVNY 337
+S + +VA+ IPA W PG+TYRSLVN+
Sbjct: 297 ESGKTIVASGVIPAGWAPGQTYRSLVNF 214
Score = 39.6 bits (80), Expect(2) = 3e-021
Identities = 21/36 (58%), Positives = 21/36 (58%)
Frame = +2 / +2
Query: 833 LVVHFTS*QAPQPSPPLYSGVLPAAIIESNGFFPTA 940
L VHFT *QAP P P LY PA I E NG TA
Sbjct: 722 LDVHFT**QAPHPWPDLYIESPPADINEKNGACSTA 829
>gb|CV257933.1|CV257933 WS0248.B21_A20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0248_A20 3', mRNA sequence
Length = 808
Score = 148 bits (318), Expect(4) = 4e-070
Identities = 59/106 (55%), Positives = 77/106 (72%)
Frame = -1 / -3
Query: 840 TTNAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILY 661
++NAACSG PVT+VITDQ PG E HFD+SGTA GAMA G D+LR GVL+I +
Sbjct: 650 SSNAACSGNPVTVVITDQCPGSPCAQESFHFDLSGTAFGAMAISGKEDQLRNAGVLQIQH 471
Query: 660 RRVPCKYTGVNIAFKVDQGANPYYFDVLIEFEDDDGDLSAVDLMEA 523
+RVPC + G + F VD G+NPYYF ++E+ED DG+L +V+L +A
Sbjct: 470 QRVPCNWPGKTVTFHVDSGSNPYYFATVVEYEDGDGELKSVELKQA 333
Score = 81.7 bits (172), Expect(4) = 4e-070
Identities = 29/50 (58%), Positives = 38/50 (76%)
Frame = -1 / -3
Query: 978 GDGSDGGACGYQTAVGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNA 829
G GSDGGACGY AV + P S I+AG +Y+ G+GCGACY+VKCT+++
Sbjct: 794 GAGSDGGACGYGNAVEQAPSSSFISAGGDSIYKSGQGCGACYQVKCTSSS 645
Score = 47.3 bits (97), Expect(4) = 4e-070
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1 / -3
Query: 519 SGVWTPMAHNWGATWRLNNGRKLKAPFGLRLTS 421
S W PM +WGA W+L+ G L+AP ++LTS
Sbjct: 326 SDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 228
Score = 46.0 bits (94), Expect(4) = 4e-070
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -1 / -3
Query: 420 DSRRVLVANNAIPAAWKPGKTYRSLVNY 337
+S + +VA+ IPA W PG+TYRSLVN+
Sbjct: 224 ESGKTIVASGVIPAGWAPGQTYRSLVNF 141
>gb|DT507734.1|DT507734 WS02419.BR_B06 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02419_B06 5', mRNA sequence
Length = 772
Score = 146 bits (313), Expect(3) = 5e-060
Identities = 58/103 (56%), Positives = 75/103 (72%)
Frame = -1 / +2
Query: 840 TTNAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILY 661
++NAACSG PVT+VITDQ PG E HFD+SGTA GAMA G D+LR GVL+I +
Sbjct: 368 SSNAACSGNPVTVVITDQCPGSPCAQESFHFDLSGTAFGAMAISGKEDQLRNAGVLQIQH 547
Query: 660 RRVPCKYTGVNIAFKVDQGANPYYFDVLIEFEDDDGDLSAVDL 532
+RVPC + G + F VD G+NPYYF ++E+ED DG+L +V+L
Sbjct: 548 QRVPCNWPGKTVTFHVDSGSNPYYFATVVEYEDGDGELKSVEL 676
Score = 85.4 bits (180), Expect(3) = 5e-060
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = -1 / +2
Query: 978 GDGSDGGACGYQTAVGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNA 829
G GSDGGACGY AV + PF S I+AG +Y+ G+GCGACY+VKCT+++
Sbjct: 224 GAGSDGGACGYGNAVEQAPFSSFISAGGDSIYKSGQGCGACYQVKCTSSS 373
Score = 83.1 bits (175), Expect(2) = 3e-021
Identities = 45/82 (54%), Positives = 49/82 (59%)
Frame = +2 / -2
Query: 587 K*YGFAP*STLNAMLTPVYLHGTLLYRILSTPPARSLSAMPGRAMAPMAVPLMSKCSTSP 766
K* GF P ST + P LHGTL I TP RS S++P AMAP AVPL SK S
Sbjct: 621 K**GFDPESTWKVTVLPGQLHGTL*C*ICKTPALRS*SSLPDIAMAPKAVPLKSK*KDSW 442
Query: 767 GNSPPGDWSVITMVTGWPEHAA 832
PG SVIT VTG+PEHAA
Sbjct: 441 AQGLPGH*SVITTVTGFPEHAA 376
Score = 39.6 bits (80), Expect(3) = 5e-060
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1 / +1
Query: 519 SGVWTPMAHNWGATWRLNNGRKLKAP 442
S W PM +WGA W+L+ G L+AP
Sbjct: 691 SDSWVPMQKSWGAVWKLDAGSLLRAP 768
Score = 39.6 bits (80), Expect(2) = 3e-021
Identities = 21/36 (58%), Positives = 21/36 (58%)
Frame = +2 / -2
Query: 833 LVVHFTS*QAPQPSPPLYSGVLPAAIIESNGFFPTA 940
L VHFT *QAP P P LY PA I E NG TA
Sbjct: 369 LDVHFT**QAPHPWPDLYIESPPADINEENGACSTA 262
>gb|CV259723.1|CV259723 WS02012.B21_B17 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02012_B17 3', mRNA sequence
Length = 724
Score = 148 bits (318), Expect(4) = 2e-057
Identities = 59/106 (55%), Positives = 77/106 (72%)
Frame = -1 / -2
Query: 840 TTNAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILY 661
++NAACSG PVT+VITDQ PG E HFD+SGTA GAMA G D+LR GVL+I +
Sbjct: 675 SSNAACSGNPVTVVITDQCPGSPCAQESFHFDLSGTAFGAMAISGKEDQLRNAGVLQIQH 496
Query: 660 RRVPCKYTGVNIAFKVDQGANPYYFDVLIEFEDDDGDLSAVDLMEA 523
+RVPC + G + F VD G+NPYYF ++E+ED DG+L +V+L +A
Sbjct: 495 QRVPCNWPGKTVTFHVDSGSNPYYFATVVEYEDGDGELKSVELKQA 358
Score = 47.3 bits (97), Expect(4) = 2e-057
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1 / -2
Query: 519 SGVWTPMAHNWGATWRLNNGRKLKAPFGLRLTS 421
S W PM +WGA W+L+ G L+AP ++LTS
Sbjct: 351 SDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 253
Score = 46.0 bits (94), Expect(4) = 2e-057
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -1 / -2
Query: 420 DSRRVLVANNAIPAAWKPGKTYRSLVNY 337
+S + +VA+ IPA W PG+TYRSLVN+
Sbjct: 249 ESGKTIVASGVIPAGWAPGQTYRSLVNF 166
Score = 39.1 bits (79), Expect(4) = 2e-057
Identities = 11/18 (61%), Positives = 17/18 (94%)
Frame = -1 / -2
Query: 882 RGGEGCGACYEVKCTTNA 829
+ G+GCGACY+VKCT+++
Sbjct: 723 KSGQGCGACYQVKCTSSS 670
>gb|BU815039.1|BU815039 N036D09 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 767
Score = 210 bits (454), Expect(2) = 1e-054
Identities = 82/168 (48%), Positives = 109/168 (64%)
Frame = -1 / +1
Query: 963 GGACGYQTAVGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNAACSGQPVTIVITDQS 784
GGACGY + V KPF + + A S L++ GEGCGACY+V+C + CS + VTI++TD+
Sbjct: 10 GGACGYGSLVDVKPFRARVGAVSPVLFKNGEGCGACYKVRCLDKSICSRRAVTIIVTDEC 189
Query: 783 PGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILYRRVPCKYTGVNIAFKVDQG 604
PGG HFD+SG A G MA G +LR G L ++YRR PCKY G NIAF V++G
Sbjct: 190 PGGYCSNGNTHFDLSGAAFGRMAISGENGQLRNRGELPVIYRRTPCKYPGKNIAFHVNEG 369
Query: 603 ANPYYFDVLIEFEDDDGDLSAVDLMEAGSGVWTPMAHNWGATWRLNNG 460
+ Y+ +L+EFED DGD+ ++ + EAG W M H WGATW + G
Sbjct: 370 STDYWLSLLVEFEDGDGDVGSMHIREAGGTEWLEMNHVWGATWCIVRG 513
Score = 23.5 bits (45), Expect(2) = 1e-054
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -1 / +1
Query: 426 TSDSRRVLVANNAIPAAWKP 367
T +RR L A IP W P
Sbjct: 547 TLSTRRTLSAREVIPRNWAP 606
>gb|CX659519.1|CX659519 PO01031F07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01031F07 5', mRNA sequence
Length = 633
Score = 154 bits (330), Expect(3) = 6e-053
Identities = 62/106 (58%), Positives = 78/106 (73%)
Frame = -1 / +3
Query: 840 TTNAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILY 661
++NAACSG PVT+VITDQ PGG E HFD+SGTA GAMA G D+LR GVL+I +
Sbjct: 3 SSNAACSGNPVTVVITDQCPGGPCAQESFHFDLSGTAFGAMAISGKEDQLRNAGVLQIEH 182
Query: 660 RRVPCKYTGVNIAFKVDQGANPYYFDVLIEFEDDDGDLSAVDLMEA 523
+RVPC + G + F VD G+NPYYF L+E+ED DGDL +V+L +A
Sbjct: 183 QRVPCNWPGKTVTFHVDSGSNPYYFATLVEYEDGDGDLKSVELKQA 320
Score = 47.3 bits (97), Expect(3) = 6e-053
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1 / +3
Query: 519 SGVWTPMAHNWGATWRLNNGRKLKAPFGLRLTS 421
S W PM +WGA W+L+ G L+AP ++LTS
Sbjct: 327 SDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 425
Score = 46.0 bits (94), Expect(3) = 6e-053
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -1 / +3
Query: 420 DSRRVLVANNAIPAAWKPGKTYRSLVNY 337
+S + +VA+ IPA W PG+TYRSLVN+
Sbjct: 429 ESGKTIVASGVIPAGWAPGQTYRSLVNF 512
>gb|CX654042.1|CX654042 PO02012B10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02012B10 5', mRNA sequence
Length = 639
Score = 137 bits (293), Expect(2) = 3e-051
Identities = 56/97 (57%), Positives = 69/97 (71%)
Frame = -1 / +2
Query: 840 TTNAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILY 661
++NAACSG PVT+VITDQ PGG E HFD+SGTA GAMA G D+LR GVL+I +
Sbjct: 347 SSNAACSGNPVTVVITDQCPGGPCAQESFHFDLSGTAFGAMAISGKEDQLRNAGVLQIEH 526
Query: 660 RRVPCKYTGVNIAFKVDQGANPYYFDVLIEFEDDDGD 550
+RVPC + G + F VD G+NPYYF L+E + DGD
Sbjct: 527 QRVPCNWPGKKVTFHVDSGSNPYYFATLVE*QHGDGD 637
Score = 88.6 bits (187), Expect(2) = 5e-023
Identities = 46/82 (56%), Positives = 49/82 (59%)
Frame = +2 / -1
Query: 587 K*YGFAP*STLNAMLTPVYLHGTLLYRILSTPPARSLSAMPGRAMAPMAVPLMSKCSTSP 766
K* GF P ST P LHGTL I TP RS S++P AMAP AVPL SK S
Sbjct: 600 K**GFDPESTWKVTFLPGQLHGTL*CSICKTPALRS*SSLPDIAMAPKAVPLKSK*KDSW 421
Query: 767 GNSPPGDWSVITMVTGWPEHAA 832
PPG SVIT VTG+PEHAA
Sbjct: 420 AQGPPGH*SVITTVTGFPEHAA 355
Score = 86.3 bits (182), Expect(2) = 3e-051
Identities = 30/50 (60%), Positives = 40/50 (80%)
Frame = -1 / +2
Query: 978 GDGSDGGACGYQTAVGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNA 829
G GSDGGACGY AV + PF S+I+AG +Y+ G+GCGACY+VKCT+++
Sbjct: 203 GAGSDGGACGYGNAVEQAPFSSLISAGGDSIYKSGQGCGACYQVKCTSSS 352
Score = 40.0 bits (81), Expect(2) = 5e-023
Identities = 21/36 (58%), Positives = 21/36 (58%)
Frame = +2 / -1
Query: 833 LVVHFTS*QAPQPSPPLYSGVLPAAIIESNGFFPTA 940
L VHFT *QAP P P LY PA I E NG TA
Sbjct: 348 LDVHFT**QAPHPWPDLYIESPPADISEENGACSTA 241
>gb|CV258295.1|CV258295 WS0249.B21_B24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0249_B24 3', mRNA sequence
Length = 741
Score = 147 bits (316), Expect(3) = 5e-051
Identities = 59/104 (56%), Positives = 75/104 (72%)
Frame = -1 / -1
Query: 834 NAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILYRR 655
NAACSG PVT+VITDQ PG E HFD+SGTA GAMA G D+LR GVL+I ++R
Sbjct: 741 NAACSGNPVTVVITDQCPGSPCAQESFHFDLSGTAFGAMAISGKEDQLRNAGVLQIQHQR 562
Query: 654 VPCKYTGVNIAFKVDQGANPYYFDVLIEFEDDDGDLSAVDLMEA 523
VPC + G + F VD G+NPYYF ++E+ED DG+L +V+L +A
Sbjct: 561 VPCNWPGKTVTFHVDSGSNPYYFATVVEYEDGDGELKSVELKQA 430
Score = 47.3 bits (97), Expect(3) = 5e-051
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1 / -1
Query: 519 SGVWTPMAHNWGATWRLNNGRKLKAPFGLRLTS 421
S W PM +WGA W+L+ G L+AP ++LTS
Sbjct: 423 SDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 325
Score = 46.0 bits (94), Expect(3) = 5e-051
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -1 / -1
Query: 420 DSRRVLVANNAIPAAWKPGKTYRSLVNY 337
+S + +VA+ IPA W PG+TYRSLVN+
Sbjct: 321 ESGKTIVASGVIPAGWAPGQTYRSLVNF 238
>gb|CX657368.1|CX657368 PO02043E09 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02043E09 5', mRNA sequence
Length = 621
Score = 127 bits (272), Expect(2) = 2e-048
Identities = 52/91 (57%), Positives = 65/91 (71%)
Frame = -1 / +2
Query: 840 TTNAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILY 661
++NAA SG PVT+VITDQ PGG E HFD+SGTA GAMA G D+LR GVL+I +
Sbjct: 347 SSNAAWSGNPVTVVITDQCPGGPCAXESFHFDLSGTAFGAMAISGKEDQLRNAGVLQIEH 526
Query: 660 RRVPCKYTGVNIAFKVDQGANPYYFDVLIEF 568
+RVPC + G + F VD G+NPYYF L+E+
Sbjct: 527 QRVPCNWPGKTVTFHVDSGSNPYYFATLVEY 619
Score = 87.7 bits (185), Expect(2) = 1e-022
Identities = 45/82 (54%), Positives = 50/82 (60%)
Frame = +2 / -1
Query: 587 K*YGFAP*STLNAMLTPVYLHGTLLYRILSTPPARSLSAMPGRAMAPMAVPLMSKCSTSP 766
K* GF P ST + P LHGTL I TP RS S++P AMAP AVPL SK S
Sbjct: 600 K**GFDPESTWKVTVLPGQLHGTL*CSICKTPALRS*SSLPDIAMAPKAVPLKSK*KDSW 421
Query: 767 GNSPPGDWSVITMVTGWPEHAA 832
PPG SVIT VTG+P+HAA
Sbjct: 420 AQGPPGH*SVITTVTGFPDHAA 355
Score = 86.3 bits (182), Expect(2) = 2e-048
Identities = 30/50 (60%), Positives = 40/50 (80%)
Frame = -1 / +2
Query: 978 GDGSDGGACGYQTAVGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNA 829
G GSDGGACGY AV + PF S+I+AG +Y+ G+GCGACY+VKCT+++
Sbjct: 203 GAGSDGGACGYGNAVEQAPFSSLISAGGDSIYKSGQGCGACYQVKCTSSS 352
Score = 40.0 bits (81), Expect(2) = 1e-022
Identities = 21/36 (58%), Positives = 21/36 (58%)
Frame = +2 / -1
Query: 833 LVVHFTS*QAPQPSPPLYSGVLPAAIIESNGFFPTA 940
L VHFT *QAP P P LY PA I E NG TA
Sbjct: 348 LDVHFT**QAPHPWPDLYIESPPADISEENGACSTA 241
>gb|CX654872.1|CX654872 PO02060H08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02060H08 5', mRNA sequence
Length = 581
Score = 126 bits (269), Expect(2) = 5e-048
Identities = 51/85 (60%), Positives = 62/85 (72%)
Frame = -1 / +1
Query: 840 TTNAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILY 661
++NAACSG PVT+VITDQ PGG E HFD+SGTA GAMA G D+LR GVL+I +
Sbjct: 319 SSNAACSGNPVTVVITDQCPGGPCAQESFHFDLSGTAFGAMAISGKEDQLRNAGVLQIEH 498
Query: 660 RRVPCKYTGVNIAFKVDQGANPYYF 586
+RVPC + G + F VD G+NPYYF
Sbjct: 499 QRVPCNWPGKTVTFHVDSGSNPYYF 573
Score = 89.0 bits (188), Expect(2) = 4e-023
Identities = 46/82 (56%), Positives = 50/82 (60%)
Frame = +2 / -1
Query: 587 K*YGFAP*STLNAMLTPVYLHGTLLYRILSTPPARSLSAMPGRAMAPMAVPLMSKCSTSP 766
K* GF P ST + P LHGTL I TP RS S++P AMAP AVPL SK S
Sbjct: 572 K**GFDPESTWKVTVLPGQLHGTL*CSICKTPALRS*SSLPDIAMAPKAVPLKSK*KDSW 393
Query: 767 GNSPPGDWSVITMVTGWPEHAA 832
PPG SVIT VTG+PEHAA
Sbjct: 392 AQGPPGH*SVITTVTGFPEHAA 327
Score = 86.3 bits (182), Expect(2) = 5e-048
Identities = 30/50 (60%), Positives = 40/50 (80%)
Frame = -1 / +1
Query: 978 GDGSDGGACGYQTAVGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNA 829
G GSDGGACGY AV + PF S+I+AG +Y+ G+GCGACY+VKCT+++
Sbjct: 175 GAGSDGGACGYGNAVEQAPFSSLISAGGDSIYKSGQGCGACYQVKCTSSS 324
Score = 40.0 bits (81), Expect(2) = 4e-023
Identities = 21/36 (58%), Positives = 21/36 (58%)
Frame = +2 / -1
Query: 833 LVVHFTS*QAPQPSPPLYSGVLPAAIIESNGFFPTA 940
L VHFT *QAP P P LY PA I E NG TA
Sbjct: 320 LDVHFT**QAPHPWPDLYIESPPADISEENGACSTA 213
>gb|BU893439.1|BU893439 P077G06 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 463
Score = 192 bits (413), Expect = 6e-048
Identities = 75/148 (50%), Positives = 101/148 (68%)
Frame = -1 / +3
Query: 981 NGDGSDGGACGYQTAVGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNAACSGQPVTI 802
+GDGSDGGACGY + V KPF + + A S L++ GEGCGACY+V+C + CS + VTI
Sbjct: 18 DGDGSDGGACGYGSLVDVKPFRARVGAVSPVLFKNGEGCGACYKVRCLDKSICSRRAVTI 197
Query: 801 VITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILYRRVPCKYTGVNIA 622
++TD+ PGG HFD+SG A+G MA G +LR G L + YRR PCKY G NIA
Sbjct: 198 IVTDECPGGYCSNGNTHFDLSGAAIGRMAISGENGQLRNRGELPVSYRRTPCKYPGKNIA 377
Query: 621 FKVDQGANPYYFDVLIEFEDDDGDLSAV 538
F V++G+ Y+ +L+EFED DGD+ ++
Sbjct: 378 FHVNEGSTDYWLSLLVEFEDGDGDVGSM 461
>gb|CX654070.1|CX654070 PO02012F04 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02012F04 5', mRNA sequence
Length = 591
Score = 113 bits (242), Expect(2) = 3e-044
Identities = 47/81 (58%), Positives = 58/81 (71%)
Frame = -1 / +2
Query: 840 TTNAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILY 661
++NAACSG PVT+VITDQ PGG E HFD+SGTA GAMA G D+LR GVL+I +
Sbjct: 347 SSNAACSGNPVTVVITDQCPGGPCAQESFHFDLSGTAFGAMAISGKEDQLRNAGVLQIEH 526
Query: 660 RRVPCKYTGVNIAFKVDQGAN 598
+RVPC + G + F VD G+N
Sbjct: 527 QRVPCNWPGKTVTFHVDSGSN 589
Score = 88.1 bits (186), Expect(2) = 7e-023
Identities = 44/79 (55%), Positives = 48/79 (60%)
Frame = +2 / -1
Query: 596 GFAP*STLNAMLTPVYLHGTLLYRILSTPPARSLSAMPGRAMAPMAVPLMSKCSTSPGNS 775
GF P ST + P LHGTL I TP RS S++P AMAP AVPL SK S
Sbjct: 591 GFDPESTWKVTVLPGQLHGTL*CSICKTPALRS*SSLPDIAMAPKAVPLKSK*KDSWAQG 412
Query: 776 PPGDWSVITMVTGWPEHAA 832
PPG SVIT VTG+PEHAA
Sbjct: 411 PPGH*SVITTVTGFPEHAA 355
Score = 86.3 bits (182), Expect(2) = 3e-044
Identities = 30/50 (60%), Positives = 40/50 (80%)
Frame = -1 / +2
Query: 978 GDGSDGGACGYQTAVGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNA 829
G GSDGGACGY AV + PF S+I+AG +Y+ G+GCGACY+VKCT+++
Sbjct: 203 GAGSDGGACGYGNAVEQAPFSSLISAGGDSIYKSGQGCGACYQVKCTSSS 352
Score = 40.0 bits (81), Expect(2) = 7e-023
Identities = 21/36 (58%), Positives = 21/36 (58%)
Frame = +2 / -1
Query: 833 LVVHFTS*QAPQPSPPLYSGVLPAAIIESNGFFPTA 940
L VHFT *QAP P P LY PA I E NG TA
Sbjct: 348 LDVHFT**QAPHPWPDLYIESPPADISEENGACSTA 241
>gb|CV270280.1|CV270280 WS0151.B21_J04 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0151_J04 3', mRNA sequence
Length = 913
Score = 172 bits (370), Expect = 5e-042
Identities = 65/136 (47%), Positives = 88/136 (64%)
Frame = -1 / -2
Query: 867 CGACYEVKCTTNAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLR 688
CGACY+V+C + CS + VTI++TD+ PGG HFD+SG A G MA G +LR
Sbjct: 912 CGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAISGENGQLR 733
Query: 687 AGGVLRILYRRVPCKYTGVNIAFKVDQGANPYYFDVLIEFEDDDGDLSAVDLMEAGSGVW 508
G + ++YRR PCKY G NIAF V++G+ Y+ +L+EFED DGD+ ++ + EAG W
Sbjct: 732 NRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSILVEFEDGDGDVGSMHIREAGGTEW 553
Query: 507 TPMAHNWGATWRLNNG 460
M H WGATW + G
Sbjct: 552 LEMNHVWGATWCIIRG 505
>gb|BU895814.1|BU895814 X031D08 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 624
Score = 154 bits (331), Expect = 1e-036
Identities = 60/128 (46%), Positives = 84/128 (65%)
Frame = -1 / +1
Query: 909 IAAGSTPLYRGGEGCGACYEVKCTTNAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTA 730
+ AG L++ GEG GACY+V+C + CS + VTI++TD+ PGG HFD+SG A
Sbjct: 13 LTAGEPVLFKNGEGRGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAA 192
Query: 729 MGAMARPGMADKLRAGGVLRILYRRVPCKYTGVNIAFKVDQGANPYYFDVLIEFEDDDGD 550
G MA G +LR G L ++YRR PCKY G NIAF V++G+ Y+ +L+EFED DGD
Sbjct: 193 FGRMAISGENGQLRNRGELPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGD 372
Query: 549 LSAVDLME 526
+ ++ + E
Sbjct: 373 VGSMHIRE 396
>gb|CX655588.1|CX655588 PO02036H10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02036H10 5', mRNA sequence
Length = 362
Score = 114 bits (243), Expect(2) = 6e-036
Identities = 46/84 (54%), Positives = 59/84 (70%)
Frame = -1 / +3
Query: 840 TTNAACSGQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILY 661
++NAACSG PVT+VITDQ PGG + H D+SGTA GAMA G D+LR VL+I +
Sbjct: 102 SSNAACSGNPVTVVITDQCPGGPCAHQSFHLDLSGTAFGAMAISGKEDQLRNAAVLQIEH 281
Query: 660 RRVPCKYTGVNIAFKVDQGANPYY 589
+RVPC + G + F VD G++PYY
Sbjct: 282 QRVPCNWPGKTVTFHVDSGSHPYY 353
Score = 57.9 bits (120), Expect(2) = 6e-036
Identities = 18/32 (56%), Positives = 27/32 (84%)
Frame = -1 / +3
Query: 924 PFDSMIAAGSTPLYRGGEGCGACYEVKCTTNA 829
PF S+I+AG +Y+ G+GCGACY+VKCT+++
Sbjct: 12 PFSSLISAGGDSIYKSGQGCGACYQVKCTSSS 107
>gb|BI138921.1|BI138921 F119P23Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 493
Score = 145 bits (311), Expect = 7e-034
Identities = 56/120 (46%), Positives = 76/120 (63%)
Frame = -1 / +1
Query: 819 GQPVTIVITDQSPGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILYRRVPCKY 640
G+ VTI++TD+ PGG HFD+SG A G MA G +LR G + ++YRR PC Y
Sbjct: 1 GRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAISGENGQLRNRGEIPVIYRRTPCNY 180
Query: 639 TGVNIAFKVDQGANPYYFDVLIEFEDDDGDLSAVDLMEAGSGVWTPMAHNWGATWRLNNG 460
G NIAF V++G+ Y+ +L+EFED DGD+ ++ + EAG W M H WGATW + G
Sbjct: 181 PGKNIAFHVNEGSTDYWLSILVEFEDGDGDVGSMHIREAGGTEWLEMNHVWGATWCIIRG 360
>gb|BU889222.1|BU889222 P018B12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 324
Score = 124 bits (265), Expect = 1e-027
Identities = 48/92 (52%), Positives = 62/92 (67%)
Frame = -1 / +2
Query: 981 NGDGSDGGACGYQTAVGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNAACSGQPVTI 802
+GDGSDGGACGY + V KPF + + A S L++ GEGCGACY+V+C + CS + VTI
Sbjct: 38 DGDGSDGGACGYGSLVDVKPFRARVGAVSPVLFKNGEGCGACYKVRCLDKSICSRRAVTI 217
Query: 801 VITDQSPGGLFPGEVEHFDMSGTAMGAMARPG 706
++TD+ PGG HFD+SG A G MA G
Sbjct: 218 IVTDECPGGYCSNGNTHFDLSGAAFGRMAISG 313
>gb|BU884348.1|BU884348 R009D12 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 663
Score = 91.8 bits (194), Expect(2) = 3e-024
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = -1 / +1
Query: 657 RVPCKYTGVNIAFKVDQGANPYYFDVLIEFEDDDGDLSAVDLMEAGSGVWTPMAHNWGAT 478
R PCKY G NIAF V++G+ Y+ +L+EFED DGD+ ++ + EAG W M H WGAT
Sbjct: 319 RTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDVGSMHIREAGGTEWLEMNHVWGAT 498
Query: 477 WRLNNG 460
W + G
Sbjct: 499 WCIVRG 516
Score = 44.1 bits (90), Expect(2) = 3e-024
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = -1 / +2
Query: 783 PGGLFPGEVEHFDMSGTAMGAMARPGMADKLRAGGVLRILYRR 655
PGG HFD+SG A G MA G +LR G L ++YRR
Sbjct: 17 PGGYCSNGNTHFDLSGAAFGRMAISGENGQLRNRGELPVIYRR 145
>gb|CV261587.1|CV261587 WS02017.B21_D05 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02017_D05 3', mRNA sequence
Length = 803
Score = 111 bits (238), Expect = 8e-024
Identities = 43/91 (47%), Positives = 58/91 (63%)
Frame = -1 / -1
Query: 732 AMGAMARPGMADKLRAGGVLRILYRRVPCKYTGVNIAFKVDQGANPYYFDVLIEFEDDDG 553
A G MA G +LR G + ++YRR PCKY G NIAF V++G+ Y+ +L+EFED DG
Sbjct: 800 AFGRMAISGENGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSILVEFEDGDG 621
Query: 552 DLSAVDLMEAGSGVWTPMAHNWGATWRLNNG 460
D+ ++ + EAG W M H WGATW + G
Sbjct: 620 DVGSMHIREAGGTEWLEMNHVWGATWCIIRG 528
>gb|CV259500.1|CV259500 WS02011.B21_I10 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02011_I10 3', mRNA sequence
Length = 458
Score = 54.2 bits (112), Expect(3) = 2e-023
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = -1 / -1
Query: 627 IAFKVDQGANPYYFDVLIEFEDDDGDLSAVDLMEA 523
+ F VD G+NPYYF ++E+ED DG+L +V+L +A
Sbjct: 458 VTFHVDSGSNPYYFATVVEYEDGDGELKSVELKQA 354
Score = 47.3 bits (97), Expect(3) = 2e-023
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1 / -1
Query: 519 SGVWTPMAHNWGATWRLNNGRKLKAPFGLRLTS 421
S W PM +WGA W+L+ G L+AP ++LTS
Sbjct: 347 SDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 249
Score = 46.0 bits (94), Expect(3) = 2e-023
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -1 / -1
Query: 420 DSRRVLVANNAIPAAWKPGKTYRSLVNY 337
+S + +VA+ IPA W PG+TYRSLVN+
Sbjct: 245 ESGKTIVASGVIPAGWAPGQTYRSLVNF 162
>gb|AJ775814.1|AJ775814 AJ775814 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400005H08F1, mRNA sequence
Length = 555
Score = 106 bits (227), Expect(2) = 1e-022
Identities = 40/79 (50%), Positives = 53/79 (67%)
Frame = -1 / +2
Query: 978 GDGSDGGACGYQTAVGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNAACSGQPVTIV 799
GDGSDGGACGY + V KP + + A S L++ GEGCGACY+V+C + CS + VTI+
Sbjct: 317 GDGSDGGACGYGSLVDVKPLRARVGAVSPILFKNGEGCGACYKVRCLDKSICSERAVTII 496
Query: 798 ITDQSPGGLFPGEVEHFDM 742
+TD+ PGG HFD+
Sbjct: 497 VTDECPGGYCSNGNTHFDL 553
Score = 23.1 bits (44), Expect(2) = 1e-022
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -2 / +3
Query: 1247 FGHCCWLQWW 1218
FG CC WW
Sbjct: 111 FGWCCGGDWW 140
>gb|CA926336.1|CA926336 MTU6CR.P13.G12 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 298
Score = 107 bits (229), Expect = 1e-022
Identities = 44/96 (45%), Positives = 59/96 (61%)
Frame = -1 / -1
Query: 936 VGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNAACSGQPVTIVITDQSPGGLFPGEV 757
V KP + + A S L++ GEGCGACY+V+C + CS + VTI++TD+ PGG
Sbjct: 289 VDVKPLRARVGAVSPILFKNGEGCGACYKVRCLDKSICSERAVTIIVTDECPGGYCSNGN 110
Query: 756 EHFDMSGTAMGAMARPGMADKLRAGGVLRILYRRVP 649
HFD+SG A G MA G +LR G L ++YRR P
Sbjct: 109 THFDLSGAAFGRMAISGENGQLRNRGELPVIYRRTP 2
>gb|CA934186.1|CA934186 MTU3TS.P4.C06 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 298
Score = 107 bits (229), Expect = 1e-022
Identities = 44/96 (45%), Positives = 59/96 (61%)
Frame = -1 / -1
Query: 936 VGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNAACSGQPVTIVITDQSPGGLFPGEV 757
V KP + + A S L++ GEGCGACY+V+C + CS + VTI++TD+ PGG
Sbjct: 289 VDVKPLRARVGAVSPILFKNGEGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGN 110
Query: 756 EHFDMSGTAMGAMARPGMADKLRAGGVLRILYRRVP 649
HFD+SG A G MA G +LR G L ++YRR P
Sbjct: 109 THFDLSGAAFGRMAISGENGQLRNRGELPVIYRRTP 2
>gb|BU890573.1|BU890573 P038G06 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 551
Score = 105 bits (223), Expect = 9e-022
Identities = 38/69 (55%), Positives = 51/69 (73%)
Frame = -1 / +1
Query: 981 NGDGSDGGACGYQTAVGKKPFDSMIAAGSTPLYRGGEGCGACYEVKCTTNAACSGQPVTI 802
+GDGSDGGACGY + V KPF + + A S L++ GEGCGACY+V+C + CS + VTI
Sbjct: 343 DGDGSDGGACGYGSLVDVKPFRARVGAVSPVLFKNGEGCGACYKVRCLDKSICSRRAVTI 522
Query: 801 VITDQSPGG 775
++TD+ PGG
Sbjct: 523 IVTDECPGG 549
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 534,647,009
Number of Sequences: 369679
Number of extensions: 6379984
Number of successful extensions: 39621
Number of sequences better than 1.0e-020: 28
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 19187540598
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)