TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.628
(1238 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU820238.1|BU820238 UA52DPG08 Populus tremula cambium cD... 206 3e-052
gb|BU834310.1|BU834310 T059E06 Populus apical shoot cDNA li... 205 4e-052
gb|BU869501.1|BU869501 M130G11 Populus flower cDNA library ... 205 4e-052
gb|BU881062.1|BU881062 UM58TC02 Populus flower cDNA library... 205 4e-052
gb|CF236888.1|CF236888 PtaJXT8D6D0608 Poplar cDNA library f... 205 4e-052
gb|CN519629.1|CN519629 GQ0104.B3_J13 GQ010 Populus trichoca... 205 4e-052
gb|CV250619.1|CV250619 WS0114.B21_D04 PT-P-FL-A-2 Populus t... 205 4e-052
gb|CX169670.1|CX169670 C10_69-92_06.ab1 leaf inoculated wit... 205 4e-052
gb|DT470749.1|DT470749 WS01210.BR_K10 PT-GT-FL-A-3 Populus ... 205 4e-052
gb|DT472591.1|DT472591 WS01226.BR_K18 PT-GT-FL-A-3 Populus ... 205 4e-052
gb|DT475370.1|DT475370 WS0126.BR_O13 PT-GT-FL-A-3 Populus t... 205 4e-052
gb|DT498036.1|DT498036 WS0114.BR_D04 PT-P-FL-A-2 Populus tr... 205 4e-052
gb|DT501383.1|DT501383 WS01312.BR_J06 PTxD-IL-FL-A-4 Populu... 205 4e-052
gb|DT502170.1|DT502170 WS01315.BR_O05 PTxD-IL-FL-A-4 Populu... 205 4e-052
gb|DT504243.1|DT504243 WS01312.B21_J06 PTxD-IL-FL-A-4 Popul... 205 4e-052
gb|DT505062.1|DT505062 WS01315.B21_O05 PTxD-IL-FL-A-4 Popul... 205 4e-052
gb|DV463438.1|DV463438 MTUNUL1.P15.H09 NUL Populus fremonti... 205 4e-052
gb|DV463711.1|DV463711 MTUNUL1.P19.E04 NUL Populus fremonti... 205 4e-052
gb|DV465447.1|DV465447 MTUNUL1.P39.G01 NUL Populus fremonti... 205 4e-052
gb|CN519651.1|CN519651 GQ0101.B3_G06 GQ010 Populus trichoca... 205 5e-052
gb|AJ775016.1|AJ775016 AJ775016 Populus euphratica shoot 3-... 205 5e-052
gb|CX172161.1|CX172161 F01_69-87_11.ab1 leaf inoculated wit... 205 5e-052
gb|CN519767.1|CN519767 GQ0108.B3_G18 GQ010 Populus trichoca... 204 9e-052
gb|CB239849.1|CB239849 RSH17F03 two-month-old roots from cl... 204 1e-051
gb|BP925893.1|BP925893 BP925893 full-length enriched poplar... 203 2e-051
gb|CV130949.1|CV130949 L1P02b06 Populus stem seasonal libra... 203 2e-051
gb|BP928712.1|BP928712 BP928712 full-length enriched poplar... 200 1e-050
gb|CF229231.1|CF229231 PtaXM0022H10H1016 Poplar cDNA librar... 199 3e-050
gb|DN500085.1|DN500085 UB17CPC02.5pR Populus active cambium... 199 3e-050
gb|BU817280.1|BU817280 UA15CPA06 Populus tremula cambium cD... 183 2e-045
gb|CB184975.1|CB184975 PopSC00109 Poplar SC cDNA library Po... 177 1e-043
gb|CV244815.1|CV244815 WS0255.B21_L05 PT-MB-N-A-15 Populus ... 177 1e-043
gb|CV235847.1|CV235847 WS01221.B21_N07 PT-GT-FL-A-3 Populus... 172 4e-042
gb|DV463383.1|DV463383 MTUNUL1.P15.C02 NUL Populus fremonti... 172 4e-042
gb|DT501755.1|DT501755 WS01314.BR_B09 PTxD-IL-FL-A-4 Populu... 108 7e-042
gb|DT504615.1|DT504615 WS01314.B21_B09 PTxD-IL-FL-A-4 Popul... 163 2e-039
gb|BP925843.1|BP925843 BP925843 full-length enriched poplar... 157 1e-037
gb|DT471000.1|DT471000 WS01211.BR_M02 PT-GT-FL-A-3 Populus ... 123 6e-037
gb|BU818202.1|BU818202 UA27CPB05 Populus tremula cambium cD... 145 4e-034
gb|CV236042.1|CV236042 WS01222.B21_J20 PT-GT-FL-A-3 Populus... 144 8e-034
gb|CV271150.1|CV271150 WS0153.B21_O20 PTxN-IB-A-6 Populus t... 140 1e-032
gb|DT508141.1|DT508141 WS02420.BR_C20 PTxD-ICC-N-A-14 Popul... 133 2e-030
gb|CN193085.1|CN193085 PtdH477 hybrid poplar systemically w... 88 3e-029
gb|AJ775318.1|AJ775318 AJ775318 Populus euphratica shoot 3-... 122 3e-027
gb|BP925043.1|BP925043 BP925043 full-length enriched poplar... 105 8e-022
gb|CB833367.1|CB833367 R19D04 two-month-old roots from clon... 43 2e-021
gb|CN192550.1|CN192550 PtdH106 hybrid poplar systemically w... 102 4e-021
>gb|BU820238.1|BU820238 UA52DPG08 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 516
Score = 206 bits (444), Expect = 3e-052
Identities = 81/98 (82%), Positives = 87/98 (88%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDE+ AG TSGKWNGD +DKGI SEDYRFYAISAE+PEFSNKD+TLV QFSVKHEQ
Sbjct: 84 KDESTAGVWNHTSGKWNGDPDDKGIQTSEDYRFYAISAEFPEFSNKDQTLVFQFSVKHEQ 263
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 264 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 377
Score = 78.5 bits (165), Expect(2) = 1e-022
Identities = 37/64 (57%), Positives = 40/64 (62%)
Frame = +3 / -3
Query: 954 FCSCFTENCSTRVLSLLLNSGYSAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSS 1133
FCSC TEN T V SLLLNSG SAE+A*NL* PFHFPEV +PA+ SS
Sbjct: 265 FCSCLTENWKTSV*SLLLNSGNSAEIA*NL*SSLVWIPLSSGSPFHFPEVWFQTPAVLSS 86
Query: 1134 FXXS 1145
F S
Sbjct: 85 FFQS 74
Score = 48.7 bits (100), Expect(2) = 1e-022
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +3 / -3
Query: 840 MYPQISGPNIML*DVSPPNFFW 905
+YPQISGPN++L VSPPNFFW
Sbjct: 379 LYPQISGPNMILYGVSPPNFFW 314
>gb|BU834310.1|BU834310 T059E06 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 599
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +1
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 154 KDENTAGVWNFTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 333
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 334 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 447
Score = 80.3 bits (169), Expect(2) = 2e-022
Identities = 39/76 (51%), Positives = 42/76 (55%)
Frame = +3 / -1
Query: 954 FCSCFTENCSTRVLSLLLNSGYSAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSS 1133
FCSC TEN T V SLLLN G SAE+A*NL* PFHFPEV +PA+FSS
Sbjct: 335 FCSCLTENWKTSV*SLLLNLGNSAEIA*NL*SSLVWIPLSLGSPFHFPEVKFHTPAVFSS 156
Query: 1134 FXXSXXXXXXXQXSXN 1181
F S S N
Sbjct: 155 FFQSDTTHLFSHPSSN 108
Score = 46.4 bits (95), Expect(2) = 2e-022
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / -1
Query: 840 MYPQISGPNIML*DVSPPNFFW 905
+YP ISGPN++L VSPPNFFW
Sbjct: 449 LYPHISGPNMILYGVSPPNFFW 384
>gb|BU869501.1|BU869501 M130G11 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 664
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 186 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 365
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 366 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 479
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / -1
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 481 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 302
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 301 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 140
>gb|BU881062.1|BU881062 UM58TC02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 648
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 153 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 332
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 333 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 446
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / -3
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 448 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 269
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 268 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 107
>gb|CF236888.1|CF236888 PtaJXT8D6D0608 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 54 KDENTAGVWNFTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 233
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 234 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 347
Score = 80.3 bits (169), Expect(2) = 2e-022
Identities = 39/76 (51%), Positives = 42/76 (55%)
Frame = +3 / -1
Query: 954 FCSCFTENCSTRVLSLLLNSGYSAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSS 1133
FCSC TEN T V SLLLN G SAE+A*NL* PFHFPEV +PA+FSS
Sbjct: 235 FCSCLTENWKTSV*SLLLNLGNSAEIA*NL*SSLVWIPLSLGSPFHFPEVKFHTPAVFSS 56
Query: 1134 FXXSXXXXXXXQXSXN 1181
F S S N
Sbjct: 55 FFQSDTTHLFSHPSSN 8
Score = 46.4 bits (95), Expect(2) = 2e-022
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / -1
Query: 840 MYPQISGPNIML*DVSPPNFFW 905
+YP ISGPN++L VSPPNFFW
Sbjct: 349 LYPHISGPNMILYGVSPPNFFW 284
>gb|CN519629.1|CN519629 GQ0104.B3_J13 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_J13 5', mRNA sequence
Length = 773
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +1
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 127 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 306
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 307 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 420
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / -1
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 422 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 243
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 242 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 81
>gb|CV250619.1|CV250619 WS0114.B21_D04 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0114_D04
3', mRNA sequence
Length = 629
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / -3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 444 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 265
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 264 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 151
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / +2
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 149 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 328
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 329 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 490
>gb|CX169670.1|CX169670 C10_69-92_06.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 611
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 126 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 305
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 306 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 419
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / -2
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 421 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 242
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 241 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 80
>gb|DT470749.1|DT470749 WS01210.BR_K10 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01210_K10 5', mRNA sequence
Length = 629
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +2
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 146 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 325
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 326 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 439
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / -3
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 441 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 262
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 261 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 100
>gb|DT472591.1|DT472591 WS01226.BR_K18 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01226_K18 5', mRNA sequence
Length = 864
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +1
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 157 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 336
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 337 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 450
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / -2
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 452 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 273
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 272 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 111
>gb|DT475370.1|DT475370 WS0126.BR_O13 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS0126_O13
5', mRNA sequence
Length = 591
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +1
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 151 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 330
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 331 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 444
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / -2
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 446 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 267
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 266 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 105
>gb|DT498036.1|DT498036 WS0114.BR_D04 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0114_D04
5', mRNA sequence
Length = 587
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 153 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 332
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 333 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 446
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / -2
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 448 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 269
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 268 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 107
>gb|DT501383.1|DT501383 WS01312.BR_J06 PTxD-IL-FL-A-4 Populus trichocarpa x Populus deltoides
cDNA clone WS01312_J06 5', mRNA sequence
Length = 663
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 153 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 332
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 333 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 446
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / -3
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 448 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 269
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 268 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 107
>gb|DT502170.1|DT502170 WS01315.BR_O05 PTxD-IL-FL-A-4 Populus trichocarpa x Populus deltoides
cDNA clone WS01315_O05 5', mRNA sequence
Length = 876
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 153 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 332
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 333 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 446
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / -3
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 448 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 269
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 268 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 107
>gb|DT504243.1|DT504243 WS01312.B21_J06 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_J06 3', mRNA sequence
Length = 855
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / -1
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 726 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 547
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 546 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 433
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / +2
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 431 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 610
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 611 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 772
>gb|DT505062.1|DT505062 WS01315.B21_O05 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01315_O05 3', mRNA sequence
Length = 867
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / -2
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 725 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 546
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 545 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 432
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / +1
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 430 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 609
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 610 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 771
>gb|DV463438.1|DV463438 MTUNUL1.P15.H09 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 693
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +1
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 166 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 345
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 346 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 459
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / -2
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 461 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 282
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 281 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 120
>gb|DV463711.1|DV463711 MTUNUL1.P19.E04 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 643
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +1
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 160 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 339
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 340 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 453
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / -3
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 455 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 276
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 275 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 114
>gb|DV465447.1|DV465447 MTUNUL1.P39.G01 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 874
Score = 205 bits (443), Expect = 4e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +2
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 167 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 346
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 347 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 460
Score = 116 bits (247), Expect = 4e-025
Identities = 55/114 (48%), Positives = 61/114 (53%)
Frame = +3 / -2
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 462 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 283
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 282 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 121
>gb|CN519651.1|CN519651 GQ0101.B3_G06 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0101_G06 5', mRNA sequence
Length = 642
Score = 205 bits (442), Expect = 5e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDE+ AG TSGKWNGD DKGI SEDYRFYAISAE+PEFSNKD+TLV QFSVKHEQ
Sbjct: 117 KDESTAGVWNHTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDQTLVFQFSVKHEQ 296
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 297 KLDCGGGYLKLLSGEVDQKKFGGDTPYSIMFGPDICGY 410
Score = 78.0 bits (164), Expect(2) = 2e-022
Identities = 37/64 (57%), Positives = 40/64 (62%)
Frame = +3 / -3
Query: 954 FCSCFTENCSTRVLSLLLNSGYSAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSS 1133
FCSC TEN T V SLLLNSG SAE+A*NL* PFHFPEV +PA+ SS
Sbjct: 298 FCSCLTENWKTSV*SLLLNSGNSAEIA*NL*SSLVWIPLSLGSPFHFPEVWFQTPAVLSS 119
Query: 1134 FXXS 1145
F S
Sbjct: 118 FFQS 107
Score = 48.7 bits (100), Expect(2) = 2e-022
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +3 / -3
Query: 840 MYPQISGPNIML*DVSPPNFFW 905
+YPQISGPN++L VSPPNFFW
Sbjct: 412 LYPQISGPNMILYGVSPPNFFW 347
>gb|AJ775016.1|AJ775016 AJ775016 Populus euphratica shoot 3-6 months Populus euphratica cDNA
clone P0000300026H05F1, mRNA sequence
Length = 563
Score = 205 bits (442), Expect = 5e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDE+ AG TSGKWNGD DKGI SEDYRFYAISAE+PEFSNKD+TLV QFSVKHEQ
Sbjct: 123 KDESTAGVWNHTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDQTLVFQFSVKHEQ 302
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 303 KLDCGGGYLKLLSGEVDQKKFGGDTPYSIMFGPDICGY 416
Score = 78.0 bits (164), Expect(2) = 2e-022
Identities = 37/64 (57%), Positives = 40/64 (62%)
Frame = +3 / -2
Query: 954 FCSCFTENCSTRVLSLLLNSGYSAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSS 1133
FCSC TEN T V SLLLNSG SAE+A*NL* PFHFPEV +PA+ SS
Sbjct: 304 FCSCLTENWKTSV*SLLLNSGNSAEIA*NL*SSLVWIPLSLGSPFHFPEVWFHTPAVLSS 125
Query: 1134 FXXS 1145
F S
Sbjct: 124 FFQS 113
Score = 48.7 bits (100), Expect(2) = 2e-022
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +3 / -2
Query: 840 MYPQISGPNIML*DVSPPNFFW 905
+YPQISGPN++L VSPPNFFW
Sbjct: 418 LYPQISGPNMILYGVSPPNFFW 353
>gb|CX172161.1|CX172161 F01_69-87_11.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 619
Score = 205 bits (442), Expect = 5e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDE+ AG TSGKWNGD DKGI SEDYRFYAISAE+PEFSNKD+TLV QFSVKHEQ
Sbjct: 120 KDESTAGVWNHTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDQTLVFQFSVKHEQ 299
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 300 KLDCGGGYLKLLSGEVDQKKFGGDTPYSIMFGPDICGY 413
Score = 78.0 bits (164), Expect(2) = 2e-022
Identities = 37/64 (57%), Positives = 40/64 (62%)
Frame = +3 / -1
Query: 954 FCSCFTENCSTRVLSLLLNSGYSAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSS 1133
FCSC TEN T V SLLLNSG SAE+A*NL* PFHFPEV +PA+ SS
Sbjct: 301 FCSCLTENWKTSV*SLLLNSGNSAEIA*NL*SSLVWIPLSLGSPFHFPEVWFQTPAVLSS 122
Query: 1134 FXXS 1145
F S
Sbjct: 121 FFQS 110
Score = 48.7 bits (100), Expect(2) = 2e-022
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +3 / -1
Query: 840 MYPQISGPNIML*DVSPPNFFW 905
+YPQISGPN++L VSPPNFFW
Sbjct: 415 LYPQISGPNMILYGVSPPNFFW 350
>gb|CN519767.1|CN519767 GQ0108.B3_G18 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_G18 5', mRNA sequence
Length = 379
Score = 204 bits (440), Expect = 9e-052
Identities = 81/98 (82%), Positives = 86/98 (87%)
Frame = -2 / +1
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGDA DKGI SEDYRFYAISAE+PEFSNKD+TLV QFSVKHEQ
Sbjct: 73 KDENTAGVWNHTSGKWNGDANDKGIQTSEDYRFYAISAEFPEFSNKDQTLVFQFSVKHEQ 252
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGP ICG+
Sbjct: 253 KLDCGGGYLKLLSGEVDQKKFGGDTPYSIMFGPXICGH 366
Score = 81.3 bits (171), Expect(2) = 1e-021
Identities = 38/64 (59%), Positives = 41/64 (64%)
Frame = +3 / -3
Query: 954 FCSCFTENCSTRVLSLLLNSGYSAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSS 1133
FCSC TEN T V SLLLNSG SAE+A*NL* PFHFPEV +PA+FSS
Sbjct: 254 FCSCLTENWKTSV*SLLLNSGNSAEIA*NL*SSLVWIPLSLASPFHFPEVWFQTPAVFSS 75
Query: 1134 FXXS 1145
F S
Sbjct: 74 FFQS 63
Score = 42.8 bits (87), Expect(2) = 1e-021
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3 / -3
Query: 846 PQISGPNIML*DVSPPNFFW 905
PQI GPN++L VSPPNFFW
Sbjct: 362 PQIXGPNMILYGVSPPNFFW 303
>gb|CB239849.1|CB239849 RSH17F03 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x Populus
deltoides cDNA 5', mRNA sequence
Length = 558
Score = 204 bits (439), Expect = 1e-051
Identities = 80/98 (81%), Positives = 86/98 (87%)
Frame = -2 / +1
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHE+
Sbjct: 163 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHER 342
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 343 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 456
Score = 110 bits (235), Expect = 2e-023
Identities = 54/114 (47%), Positives = 60/114 (52%)
Frame = +3 / -2
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW F SC TEN T V SLLLN G
Sbjct: 458 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFRSCLTENWKTSV*SLLLNLGN 279
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXSXXXXXXXQXSXN 1181
SAE+A*NL* PFHFPEV +PA+FSSF S S N
Sbjct: 278 SAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSSFFQSDTTQLFSHPSSN 117
>gb|BP925893.1|BP925893 BP925893 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-052_G09.f 5', mRNA sequence
Length = 577
Score = 203 bits (438), Expect = 2e-051
Identities = 80/98 (81%), Positives = 86/98 (87%)
Frame = -2 / +2
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKW+GD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 152 KDENTAGVWNYTSGKWDGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 331
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 332 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 445
Score = 75.3 bits (158), Expect(2) = 5e-021
Identities = 38/76 (50%), Positives = 41/76 (53%)
Frame = +3 / -2
Query: 954 FCSCFTENCSTRVLSLLLNSGYSAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSS 1133
FCSC TEN T V SLLLN G SAE+A*NL* P HFPEV +PA+FSS
Sbjct: 333 FCSCLTENWKTSV*SLLLNLGNSAEIA*NL*SSLVWIPLSLGSPSHFPEV*FHTPAVFSS 154
Query: 1134 FXXSXXXXXXXQXSXN 1181
F S S N
Sbjct: 153 FFQSDTTQLFSHPSSN 106
Score = 46.4 bits (95), Expect(2) = 5e-021
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / -2
Query: 840 MYPQISGPNIML*DVSPPNFFW 905
+YP ISGPN++L VSPPNFFW
Sbjct: 447 LYPHISGPNMILYGVSPPNFFW 382
>gb|CV130949.1|CV130949 L1P02b06 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 615
Score = 203 bits (437), Expect = 2e-051
Identities = 80/98 (81%), Positives = 85/98 (86%)
Frame = -2 / +1
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKW GD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 31 KDENTAGVWNYTSGKWTGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 210
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 211 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 324
Score = 111 bits (236), Expect = 1e-023
Identities = 52/102 (50%), Positives = 58/102 (56%)
Frame = +3 / -2
Query: 840 MYPQISGPNIML*DVSPPNFFWXXXXXXXXXXXXXXXXFCSCFTENCSTRVLSLLLNSGY 1019
+YP ISGPN++L VSPPNFFW FCSC TEN T V SLLLN G
Sbjct: 326 LYPHISGPNMILYGVSPPNFFWSTSPLSNFMYPPPQSSFCSCLTENWKTSV*SLLLNLGN 147
Query: 1020 SAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSSFXXS 1145
SAE+A*NL* P HFPEV +PA+FSSF S
Sbjct: 146 SAEIA*NL*SSLVWIPLSLGSPVHFPEV*FHTPAVFSSFFQS 21
>gb|BP928712.1|BP928712 BP928712 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-087_I23.f 5', mRNA sequence
Length = 444
Score = 200 bits (432), Expect = 1e-050
Identities = 79/97 (81%), Positives = 85/97 (87%)
Frame = -2 / +2
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 152 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 331
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICG 845
KLDCGGGY+KLL G+VDQKKFGGD+ YSIMFGPDICG
Sbjct: 332 KLDCGGGYMKLLSGEVDQKKFGGDSPYSIMFGPDICG 442
Score = 79.0 bits (166), Expect(2) = 2e-021
Identities = 39/76 (51%), Positives = 42/76 (55%)
Frame = +3 / -1
Query: 954 FCSCFTENCSTRVLSLLLNSGYSAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSS 1133
FCSC TEN T V SLLLN G SAE+A*NL* PFHFPEV +PA+FSS
Sbjct: 333 FCSCLTENWKTSV*SLLLNLGNSAEIA*NL*SSLVWIPLSLGSPFHFPEV*FHTPAVFSS 154
Query: 1134 FXXSXXXXXXXQXSXN 1181
F S S N
Sbjct: 153 FFQSDTTQLFSHPSSN 106
Score = 44.1 bits (90), Expect(2) = 2e-021
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3 / -1
Query: 843 YPQISGPNIML*DVSPPNFFW 905
YP ISGPN++L +SPPNFFW
Sbjct: 444 YPHISGPNMILYGLSPPNFFW 382
>gb|CF229231.1|CF229231 PtaXM0022H10H1016 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 584
Score = 199 bits (429), Expect = 3e-050
Identities = 79/98 (80%), Positives = 84/98 (85%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNG DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 147 KDENTAGVWNFTSGKWNGXPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 326
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKKFGGDT YSIMFGP ICGY
Sbjct: 327 KLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPXICGY 440
Score = 79.9 bits (168), Expect(2) = 8e-022
Identities = 40/76 (52%), Positives = 43/76 (56%)
Frame = +3 / -2
Query: 954 FCSCFTENCSTRVLSLLLNSGYSAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSS 1133
FCSC TEN T V SLLLN G SAE+A*NL* PFHFPEV +PA+FSS
Sbjct: 328 FCSCLTENWKTSV*SLLLNLGNSAEIA*NL*SSLVWIPLSLGXPFHFPEVKFHTPAVFSS 149
Query: 1134 FXXSXXXXXXXQXSXN 1181
F S S N
Sbjct: 148 FFQSDTTHLFSHPSSN 101
Score = 44.6 bits (91), Expect(2) = 8e-022
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3 / -2
Query: 840 MYPQISGPNIML*DVSPPNFFW 905
+YP I GPN++L VSPPNFFW
Sbjct: 442 LYPHIXGPNMILYGVSPPNFFW 377
>gb|DN500085.1|DN500085 UB17CPC02.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB17CPC02 5', mRNA sequence
Length = 769
Score = 199 bits (429), Expect = 3e-050
Identities = 78/98 (79%), Positives = 86/98 (87%)
Frame = -2 / +1
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDE+ AG TSGKWNGD +DKGI SEDYRFYAIS+E+PEFSNKD+TLV QFSVKHEQ
Sbjct: 142 KDESTAGVWNHTSGKWNGDPDDKGIQTSEDYRFYAISSEFPEFSNKDQTLVFQFSVKHEQ 321
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KLDCGGGY+KLL G+VDQKK GGDT YSI+FGPDICGY
Sbjct: 322 KLDCGGGYMKLLSGEVDQKKCGGDTPYSIVFGPDICGY 435
Score = 75.8 bits (159), Expect(2) = 7e-021
Identities = 36/64 (56%), Positives = 39/64 (60%)
Frame = +3 / -3
Query: 954 FCSCFTENCSTRVLSLLLNSGYSAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSS 1133
FCSC TEN T V SLLLNSG S E+A*NL* PFHFPEV +PA+ SS
Sbjct: 323 FCSCLTENWKTSV*SLLLNSGNSDEIA*NL*SSLVWIPLSSGSPFHFPEVWFQTPAVLSS 144
Query: 1134 FXXS 1145
F S
Sbjct: 143 FFQS 132
Score = 45.5 bits (93), Expect(2) = 7e-021
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / -3
Query: 840 MYPQISGPNIML*DVSPPNFFW 905
+YPQISGPN +L VSPP+FFW
Sbjct: 437 LYPQISGPNTILYGVSPPHFFW 372
>gb|BU817280.1|BU817280 UA15CPA06 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 377
Score = 183 bits (394), Expect = 2e-045
Identities = 73/92 (79%), Positives = 80/92 (86%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDE+ AG T+GKWNGD +DKGI SEDYRFYAISAE+PEFSNKD+TLV QFSVKHEQ
Sbjct: 84 KDESTAGVWNHTAGKWNGDPDDKGIQTSEDYRFYAISAEFPEFSNKDQTLVFQFSVKHEQ 263
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFG 860
KLDCGGGY+KLL G+VDQKK GGDT YSIMFG
Sbjct: 264 KLDCGGGYMKLLSGEVDQKKCGGDTPYSIMFG 359
>gb|CB184975.1|CB184975 PopSC00109 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PopSC00109, mRNA sequence
Length = 480
Score = 177 bits (381), Expect = 1e-043
Identities = 69/80 (86%), Positives = 74/80 (92%)
Frame = -2 / +2
Query: 1081 DAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQ 902
D +DKGI SEDYRFYAISAE+PEFSNKD+TLV QFSVKHEQKLDCGGGY+KLL G+VDQ
Sbjct: 2 DPDDKGIQTSEDYRFYAISAEFPEFSNKDQTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQ 181
Query: 901 KKFGGDTSYSIMFGPDICGY 842
KKFGGDT YSIMFGPDICGY
Sbjct: 182 KKFGGDTPYSIMFGPDICGY 241
>gb|CV244815.1|CV244815 WS0255.B21_L05 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0255_L05
3', mRNA sequence
Length = 933
Score = 177 bits (381), Expect = 1e-043
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = -2 / -3
Query: 1087 NGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDV 908
NGD DKGI SEDY FYAISAE+P+FSNKD+TLV QFSVKHEQKLDCGGGY+KLL G+V
Sbjct: 928 NGDPNDKGIQTSEDYSFYAISAEFPKFSNKDQTLVFQFSVKHEQKLDCGGGYMKLLSGEV 749
Query: 907 DQKKFGGDTSYSIMFGPDICGY 842
DQKKFGGDT YSIMFGPDICGY
Sbjct: 748 DQKKFGGDTPYSIMFGPDICGY 683
>gb|CV235847.1|CV235847 WS01221.B21_N07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01221_N07 3', mRNA sequence
Length = 665
Score = 172 bits (370), Expect = 4e-042
Identities = 67/77 (87%), Positives = 72/77 (93%)
Frame = -2 / -3
Query: 1072 DKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKF 893
DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQKLDCGGGY+KLL G+VDQKKF
Sbjct: 663 DKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKF 484
Query: 892 GGDTSYSIMFGPDICGY 842
GGDT YSIMFGPDICGY
Sbjct: 483 GGDTPYSIMFGPDICGY 433
>gb|DV463383.1|DV463383 MTUNUL1.P15.C02 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 853
Score = 172 bits (370), Expect = 4e-042
Identities = 67/77 (87%), Positives = 72/77 (93%)
Frame = -2 / +3
Query: 1072 DKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKF 893
DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQKLDCGGGY+KLL G+VDQKKF
Sbjct: 36 DKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKF 215
Query: 892 GGDTSYSIMFGPDICGY 842
GGDT YSIMFGPDICGY
Sbjct: 216 GGDTPYSIMFGPDICGY 266
>gb|DT501755.1|DT501755 WS01314.BR_B09 PTxD-IL-FL-A-4 Populus trichocarpa x Populus deltoides
cDNA clone WS01314_B09 5', mRNA sequence
Length = 843
Score = 108 bits (231), Expect(2) = 7e-042
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = -2 / +1
Query: 1015 PEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
P ++D+TLV QFSV+HEQKLDCGGG +KLL G+VDQKKFGGDT YS MFG DICGY
Sbjct: 274 P*IQHEDQTLVFQFSVEHEQKLDCGGGNMKLLIGEVDQKKFGGDTPYSSMFGTDICGY 447
Score = 83.1 bits (175), Expect(2) = 7e-042
Identities = 33/44 (75%), Positives = 35/44 (79%)
Frame = -2 / +2
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFS 1004
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FS
Sbjct: 155 KDENSAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFS 286
>gb|DT504615.1|DT504615 WS01314.B21_B09 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01314_B09 3', mRNA sequence
Length = 758
Score = 163 bits (351), Expect = 2e-039
Identities = 68/93 (73%), Positives = 72/93 (77%)
Frame = -2 / -3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDE G TSGKWNGD DKGI SE YRFY ISAE+ +FSNKD+TLV Q SVKHEQ
Sbjct: 729 KDETSFGVWNYTSGKWNGDPNDKGIQTSEAYRFYDISAEFHKFSNKDQTLVFQLSVKHEQ 550
Query: 955 KLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGP 857
KLDCGGG LL G+VDQKKFGGDT YSIMFGP
Sbjct: 549 KLDCGGGSRMLLSGEVDQKKFGGDTPYSIMFGP 451
>gb|BP925843.1|BP925843 BP925843 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-051_I17.f 5', mRNA sequence
Length = 379
Score = 157 bits (338), Expect = 1e-037
Identities = 63/79 (79%), Positives = 68/79 (86%)
Frame = -2 / +1
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDE+ AG TSGKWNGD DKGI SEDYRFYAISAE+PEFSNKD+TLV QFSVKHEQ
Sbjct: 142 KDESTAGVWNHTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDQTLVFQFSVKHEQ 321
Query: 955 KLDCGGGYVKLLGGDVDQK 899
KLDCGGGY+KLL G+VDQK
Sbjct: 322 KLDCGGGYLKLLSGEVDQK 378
>gb|DT471000.1|DT471000 WS01211.BR_M02 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01211_M02 5', mRNA sequence
Length = 628
Score = 123 bits (263), Expect(2) = 6e-037
Identities = 50/63 (79%), Positives = 53/63 (84%)
Frame = -2 / +2
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDEN AG TSGKWNGD DKGI SEDYRFYAISAE+P+FSNKD+TLV QFSVKHEQ
Sbjct: 155 KDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQ 334
Query: 955 KLD 947
KLD
Sbjct: 335 KLD 343
Score = 51.9 bits (107), Expect(2) = 6e-037
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -2 / +3
Query: 904 QKKFGGDTSYSIMFGPDICGY 842
++KFGGDT YSIMFGPDICGY
Sbjct: 390 RRKFGGDTPYSIMFGPDICGY 452
>gb|BU818202.1|BU818202 UA27CPB05 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 310
Score = 145 bits (312), Expect = 4e-034
Identities = 58/75 (77%), Positives = 64/75 (85%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDE+ AG TSGKWNGD +DKGI SEDYRFYAISAE+PEFSNKD+TLV QFSVKHEQ
Sbjct: 84 KDESTAGVWNHTSGKWNGDPDDKGIQTSEDYRFYAISAEFPEFSNKDQTLVFQFSVKHEQ 263
Query: 955 KLDCGGGYVKLLGGD 911
KLDCGGGY+K L G+
Sbjct: 264 KLDCGGGYMK*LSGE 308
>gb|CV236042.1|CV236042 WS01222.B21_J20 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01222_J20 3', mRNA sequence
Length = 624
Score = 144 bits (310), Expect = 8e-034
Identities = 56/64 (87%), Positives = 61/64 (95%)
Frame = -2 / -1
Query: 1033 AISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPD 854
AISAE+P+FSNKD+TLV QFSVKHEQKLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPD
Sbjct: 624 AISAEFPKFSNKDQTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPD 445
Query: 853 ICGY 842
ICGY
Sbjct: 444 ICGY 433
>gb|CV271150.1|CV271150 WS0153.B21_O20 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0153_O20 3', mRNA sequence
Length = 930
Score = 140 bits (301), Expect = 1e-032
Identities = 53/80 (66%), Positives = 67/80 (83%)
Frame = -2 / -2
Query: 1084 GDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVD 905
GD +DKGI + D RF+AISA+ PEF+NK++TLV Q+S++ EQ ++CGGGY+KLL G V+
Sbjct: 926 GDPDDKGIQTTTDARFFAISAKIPEFNNKNRTLVFQYSIRLEQDIECGGGYIKLLSGFVN 747
Query: 904 QKKFGGDTSYSIMFGPDICG 845
QKKFGGDT YS MFGPDICG
Sbjct: 746 QKKFGGDTPYSFMFGPDICG 687
>gb|DT508141.1|DT508141 WS02420.BR_C20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_C20 5', mRNA sequence
Length = 641
Score = 133 bits (286), Expect = 2e-030
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = -2 / -1
Query: 1015 PEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
P+FSNKD+TLV QFSVKHEQKLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 188 PKFSNKDQTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 15
>gb|CN193085.1|CN193085 PtdH477 hybrid poplar systemically wound-induced leaf cDNA library
Populus trichocarpa x Populus deltoides cDNA 5, mRNA
sequence
Length = 319
Score = 88.1 bits (186), Expect(3) = 3e-029
Identities = 35/51 (68%), Positives = 39/51 (76%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLV 983
+DEN AG TSGKWNGD DKGI SEDYR+YA AEYP+ SNKD+TLV
Sbjct: 15 EDENTAGVWNYTSGKWNGDPNDKGIQTSEDYRYYAXXAEYPKCSNKDQTLV 167
Score = 39.6 bits (80), Expect(3) = 3e-029
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -2 / +1
Query: 889 GDTSYSIMFGPDICGY 842
GDT YSIM GPDICGY
Sbjct: 256 GDTPYSIMXGPDICGY 303
Score = 39.6 bits (80), Expect(3) = 3e-029
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2 / +1
Query: 955 KLDCGGGYVKLLGGDVDQKKFG 890
K DCGGGY+K L G+VDQ G
Sbjct: 193 KADCGGGYMKXLSGEVDQXNXG 258
>gb|AJ775318.1|AJ775318 AJ775318 Populus euphratica shoot 3-6 months Populus euphratica cDNA
clone P0000300031A06F1, mRNA sequence
Length = 321
Score = 122 bits (262), Expect = 3e-027
Identities = 50/63 (79%), Positives = 53/63 (84%)
Frame = -2 / +3
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQ 956
KDE+ AG TSGKWNGD DKGI SEDYRFYAISAE+PEFSNKD+TLV QFSVKHEQ
Sbjct: 132 KDESTAGVWNHTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDQTLVFQFSVKHEQ 311
Query: 955 KLD 947
KLD
Sbjct: 312 KLD 320
>gb|BP925043.1|BP925043 BP925043 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-039_M18.f 5', mRNA sequence
Length = 317
Score = 105 bits (223), Expect = 8e-022
Identities = 42/57 (73%), Positives = 47/57 (82%)
Frame = -2 / +1
Query: 1135 KDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVK 965
KDE+ AG TSGKWNGD D+GI SEDYRFYA+SAE+PEFSNKD+TLV QFSVK
Sbjct: 139 KDESTAGVWNHTSGKWNGDPNDRGIQTSEDYRFYAMSAEFPEFSNKDQTLVFQFSVK 309
>gb|CB833367.1|CB833367 R19D04 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 530
Score = 43.2 bits (88), Expect(5) = 2e-021
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -2 / +1
Query: 949 DCGGGYVKLLGGDVDQKKF 893
DCGGGY+KLL G+VDQKK+
Sbjct: 361 DCGGGYLKLLSGEVDQKKW 417
Score = 39.1 bits (79), Expect(5) = 2e-021
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / +2
Query: 1135 KDENMAGEXXXTSGKWNGDAEDK 1067
KDE+ AG TSGKWNGD DK
Sbjct: 170 KDESTAGVWNHTSGKWNGDPNDK 238
Score = 35.9 bits (72), Expect(5) = 2e-021
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -2 / +1
Query: 1042 RFYAISAEYPEFSNK 998
RFYAISAE+PEFSN+
Sbjct: 265 RFYAISAEFPEFSNR 309
Score = 32.2 bits (64), Expect(5) = 2e-021
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -2 / +2
Query: 1006 SNKDKTLVLQFSVKHEQ 956
+ +D+TLV QFSVKHEQ
Sbjct: 302 ATEDQTLVFQFSVKHEQ 352
Score = 23.5 bits (45), Expect(5) = 2e-021
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / +2
Query: 904 QKKFGGDTSYSIM 866
+K GGDT YSIM
Sbjct: 407 RKNGGGDTPYSIM 445
>gb|CN192550.1|CN192550 PtdH106 hybrid poplar systemically wound-induced leaf cDNA library
Populus trichocarpa x Populus deltoides cDNA 5, mRNA
sequence
Length = 383
Score = 102 bits (218), Expect = 4e-021
Identities = 38/42 (90%), Positives = 40/42 (95%)
Frame = -2 / +2
Query: 967 KHEQKLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
KHEQKLDCGGGY+KLL G+VDQKKFGGDT YSIMFGPDICGY
Sbjct: 2 KHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGY 127
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 575,818,835
Number of Sequences: 369679
Number of extensions: 8699681
Number of successful extensions: 56518
Number of sequences better than 1.0e-020: 59
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 17307354459
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)