TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.392
(725 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AI166668.1|AI166668 xylem.est.478 Poplar xylem Lambda ZA... 153 1e-036
gb|BI139398.1|BI139398 F130P86Y Populus flower cDNA library... 153 1e-036
gb|CV237189.1|CV237189 WS01226.B21_K18 PT-GT-FL-A-3 Populus... 153 1e-036
gb|CV238503.1|CV238503 WS0126.B21_O13 PT-GT-FL-A-3 Populus ... 153 1e-036
gb|CV244815.1|CV244815 WS0255.B21_L05 PT-MB-N-A-15 Populus ... 153 1e-036
gb|CV253243.1|CV253243 WS0221.B21_F05 PTxD-ICC-A-12 Populus... 153 1e-036
gb|DT510938.1|DT510938 WS02429.BR_B21 PTxD-ICC-N-A-14 Popul... 153 1e-036
gb|DT515639.1|DT515639 WS02429.B21.1_B21 PTxD-ICC-N-A-14 Po... 153 1e-036
gb|CA928297.1|CA928297 MTU6TR.P1.A01 Aspen root cDNA Librar... 153 1e-036
gb|CK095579.1|CK095579 UA15CPA06.3pR Populus dormant cambiu... 153 1e-036
gb|AJ776995.1|AJ776995 AJ776995 Populus euphratica root 3-6... 153 1e-036
gb|AJ778845.1|AJ778845 AJ778845 Populus euphratica cambium ... 152 2e-036
gb|DV462945.1|DV462945 MTUNUL1.P1.G01 NUL Populus fremontii... 152 2e-036
gb|BU882546.1|BU882546 UM79TC04 Populus flower cDNA library... 152 3e-036
gb|CB240307.1|CB240307 PopSC00285 Poplar SC cDNA library Po... 148 3e-035
gb|CV261778.1|CV261778 WS02017.B21_L16 PTxN-IB-N-A-11 Popul... 148 3e-035
gb|CV233627.1|CV233627 WS01211.B21_M02 PT-GT-FL-A-3 Populus... 140 7e-033
gb|CV271141.1|CV271141 WS0153.B21_O11 PTxN-IB-A-6 Populus t... 125 4e-028
gb|DV463383.1|DV463383 MTUNUL1.P15.C02 NUL Populus fremonti... 123 1e-027
gb|CK100090.1|CK100090 B008P57.5pR Hybrid aspen plasmid lib... 122 2e-027
gb|CN518016.1|CN518016 GQ0092.B3_C12 GQ009 Populus trichoca... 121 6e-027
gb|BI139333.1|BI139333 F129P50Y Populus flower cDNA library... 120 9e-027
gb|BP932706.1|BP932706 BP932706 full-length enriched poplar... 119 2e-026
gb|AI166964.1|AI166964 xylem.est.744 Poplar xylem Lambda ZA... 118 3e-026
gb|AJ769501.1|AJ769501 AJ769501 Populus euphratica leaf 3-6... 118 3e-026
gb|CV254665.1|CV254665 WS0241.B21_N13 PTxD-ICC-N-A-14 Popul... 118 3e-026
gb|CV269227.1|CV269227 WS0207.B21_K17 PTxN-IB-N-A-11 Populu... 118 3e-026
gb|CV271150.1|CV271150 WS0153.B21_O20 PTxN-IB-A-6 Populus t... 118 3e-026
gb|DT474424.1|DT474424 WS01231.BR_O01 PT-GT-FL-A-3 Populus ... 118 3e-026
gb|DT477072.1|DT477072 WS01231.B21_O01 PT-GT-FL-A-3 Populus... 118 3e-026
gb|BU814467.1|BU814467 N030aB03 Populus bark cDNA library P... 116 1e-025
gb|CX658102.1|CX658102 PO01009D09 Poplar SC cDNA library Po... 116 1e-025
gb|CX659734.1|CX659734 PO01013D05 Poplar SC cDNA library Po... 116 1e-025
gb|BU814549.1|BU814549 N030bB03 Populus bark cDNA library P... 116 2e-025
gb|BP933065.1|BP933065 BP933065 full-length enriched poplar... 114 7e-025
gb|CX168664.1|CX168664 G03_69-68_13.ab1 leaf inoculated wit... 108 5e-023
gb|CA822515.1|CA822515 R09C04 two-month-old roots from clon... 66 6e-022
gb|CV266912.1|CV266912 WS02030.B21_F01 PTxN-IB-N-A-11 Popul... 103 2e-021
gb|DT524098.1|DT524098 WS02041.C21.1_I17 PTxN-IB-N-A-11 Pop... 103 2e-021
gb|AJ767259.1|AJ767259 AJ767259 Populus euphratica leaf adu... 101 5e-021
gb|CK109845.1|CK109845 N030B03 Populus bark cDNA library Po... 71 1e-020
>gb|AI166668.1|AI166668 xylem.est.478 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 567
Score = 153 bits (329), Expect = 1e-036
Identities = 55/72 (76%), Positives = 64/72 (88%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNYQGKWKAP+IDNPDFKDDP +Y + L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 16 KKIKNPNYQGKWKAPIIDNPDFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVSDDPE 195
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 196 YAKQMAEETWGK 231
>gb|BI139398.1|BI139398 F130P86Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 541
Score = 153 bits (329), Expect = 1e-036
Identities = 55/72 (76%), Positives = 64/72 (88%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNYQGKWKAP+IDNPDFKDDP +Y + L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 190 KKIKNPNYQGKWKAPIIDNPDFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVSDDPE 369
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 370 YAKQMAEETWGK 405
>gb|CV237189.1|CV237189 WS01226.B21_K18 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01226_K18 3', mRNA sequence
Length = 872
Score = 153 bits (329), Expect = 1e-036
Identities = 55/72 (76%), Positives = 64/72 (88%)
Frame = +3 / -1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNYQGKWKAP+IDNPDFKDDP +Y + L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 653 KKIKNPNYQGKWKAPIIDNPDFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVSDDPE 474
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 473 YAKQMAEETWGK 438
>gb|CV238503.1|CV238503 WS0126.B21_O13 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0126_O13 3', mRNA sequence
Length = 594
Score = 153 bits (329), Expect = 1e-036
Identities = 55/72 (76%), Positives = 64/72 (88%)
Frame = +3 / -2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNYQGKWKAP+IDNPDFKDDP +Y + L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 266 KKIKNPNYQGKWKAPIIDNPDFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVSDDPE 87
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 86 YAKQMAEETWGK 51
>gb|CV244815.1|CV244815 WS0255.B21_L05 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0255_L05 3', mRNA sequence
Length = 933
Score = 153 bits (329), Expect = 1e-036
Identities = 55/72 (76%), Positives = 64/72 (88%)
Frame = +3 / -3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNYQGKWKAP+IDNPDFKDDP +Y + L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 265 KKIKNPNYQGKWKAPIIDNPDFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVSDDPE 86
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 85 YAKQMAEETWGK 50
>gb|CV253243.1|CV253243 WS0221.B21_F05 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0221_F05 3', mRNA sequence
Length = 715
Score = 153 bits (329), Expect = 1e-036
Identities = 55/72 (76%), Positives = 64/72 (88%)
Frame = +3 / -2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNYQGKWKAP+IDNPDFKDDP +Y + L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 657 KKIKNPNYQGKWKAPIIDNPDFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVSDDPE 478
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 477 YAKQMAEETWGK 442
>gb|DT510938.1|DT510938 WS02429.BR_B21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_B21 5', mRNA sequence
Length = 834
Score = 153 bits (329), Expect = 1e-036
Identities = 55/72 (76%), Positives = 64/72 (88%)
Frame = +3 / -3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNYQGKWKAP+IDNPDFKDDP +Y + L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 652 KKIKNPNYQGKWKAPIIDNPDFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVSDDPE 473
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 472 YAKQMAEETWGK 437
>gb|DT515639.1|DT515639 WS02429.B21.1_B21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_B21 3', mRNA sequence
Length = 799
Score = 153 bits (329), Expect = 1e-036
Identities = 55/72 (76%), Positives = 64/72 (88%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNYQGKWKAP+IDNPDFKDDP +Y + L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 148 KKIKNPNYQGKWKAPIIDNPDFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVSDDPE 327
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 328 YAKQMAEETWGK 363
>gb|CA928297.1|CA928297 MTU6TR.P1.A01 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 414
Score = 153 bits (328), Expect = 1e-036
Identities = 55/72 (76%), Positives = 64/72 (88%)
Frame = +3 / -1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNYQGKWKAP IDNPDFKDDP +Y + +L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 396 KKIKNPNYQGKWKAPKIDNPDFKDDPELYVYPNLRYVGIELWQVKSGTLFDNVLVSDDPE 217
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 216 YAKQLAEETWGK 181
>gb|CK095579.1|CK095579 UA15CPA06.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA15CPA06 3', mRNA sequence
Length = 820
Score = 153 bits (328), Expect = 1e-036
Identities = 55/72 (76%), Positives = 64/72 (88%)
Frame = +3 / -1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNYQGKWKAP IDNPDFKDDP +Y + +L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 556 KKIKNPNYQGKWKAPKIDNPDFKDDPELYVYPNLRYVGIELWQVKSGTLFDNVLVSDDPE 377
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 376 YAKQLAEETWGK 341
>gb|AJ776995.1|AJ776995 AJ776995 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400021D12F1, mRNA sequence
Length = 712
Score = 153 bits (328), Expect = 1e-036
Identities = 55/72 (76%), Positives = 64/72 (88%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNYQGKWKAP IDNPDFKDDP +Y + +L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 405 KKIKNPNYQGKWKAPKIDNPDFKDDPELYVYPNLRYVGIELWQVKSGTLFDNVLVSDDPE 584
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 585 YAKQLAEETWGK 620
>gb|AJ778845.1|AJ778845 AJ778845 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600007B11F1, mRNA sequence
Length = 747
Score = 152 bits (327), Expect = 2e-036
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNYQGKWKAP+IDNPDFKDDP +Y + L+Y+GIELWQVKSGTLFDN+++ DDP
Sbjct: 269 KKIKNPNYQGKWKAPIIDNPDFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVCDDPE 448
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 449 YAKQMAEETWGK 484
>gb|DV462945.1|DV462945 MTUNUL1.P1.G01 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 650
Score = 152 bits (327), Expect = 2e-036
Identities = 55/72 (76%), Positives = 64/72 (88%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNYQGKWKAP IDNPDFKDDP +Y + +L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 162 KKIKNPNYQGKWKAPKIDNPDFKDDPELYVYPNLRYVGIELWQVKSGTLFDNVLLSDDPE 341
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 342 YAKQLAEETWGK 377
>gb|BU882546.1|BU882546 UM79TC04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 478
Score = 152 bits (326), Expect = 3e-036
Identities = 54/72 (75%), Positives = 64/72 (88%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KK+KNPNYQGKWKAP+IDNPDFKDDP +Y + L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 65 KKMKNPNYQGKWKAPIIDNPDFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVSDDPE 244
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 245 YAKQMAEETWGK 280
>gb|CB240307.1|CB240307 PopSC00285 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PopSC00285, mRNA sequence
Length = 364
Score = 148 bits (318), Expect = 3e-035
Identities = 53/70 (75%), Positives = 62/70 (88%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNYQGKWKAP IDNPDFKDDP +Y + +L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 154 KKIKNPNYQGKWKAPKIDNPDFKDDPEVYVYPNLRYVGIELWQVKSGTLFDNVLVSDDPE 333
Query: 189 LAKTFAEETW 218
AK AEETW
Sbjct: 334 YAKQLAEETW 363
>gb|CV261778.1|CV261778 WS02017.B21_L16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02017_L16 3', mRNA sequence
Length = 655
Score = 148 bits (318), Expect = 3e-035
Identities = 53/71 (74%), Positives = 62/71 (87%)
Frame = +3 / +2
Query: 12 KIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPAL 191
KIKNPNYQG WKAP+IDNPDFKDDP +Y + L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 2 KIKNPNYQGTWKAPIIDNPDFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVSDDPEY 181
Query: 192 AKTFAEETWGK 224
AK AEETWGK
Sbjct: 182 AKQMAEETWGK 214
>gb|CV233627.1|CV233627 WS01211.B21_M02 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01211_M02 3', mRNA sequence
Length = 680
Score = 140 bits (301), Expect = 7e-033
Identities = 49/73 (67%), Positives = 62/73 (84%)
Frame = +3 / -3
Query: 6 QKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDP 185
Q+K++ P +GKWKAP+IDNPDFKDDP +Y + L+Y+GIELWQVKSGTLFDN++++DDP
Sbjct: 666 QRKLRTPTTRGKWKAPIIDNPDFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVSDDP 487
Query: 186 ALAKTFAEETWGK 224
AK AEETWGK
Sbjct: 486 EYAKQMAEETWGK 448
>gb|CV271141.1|CV271141 WS0153.B21_O11 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0153_O11 3', mRNA sequence
Length = 634
Score = 125 bits (267), Expect = 4e-028
Identities = 45/63 (71%), Positives = 54/63 (85%)
Frame = +3 / -2
Query: 36 GKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAKTFAEET 215
GKWKAP+IDNPDFKDDP +Y + L+Y+GIELWQVKSGTLFDN++++DDP AK AEET
Sbjct: 633 GKWKAPIIDNPDFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVSDDPEYAKQMAEET 454
Query: 216 WGK 224
GK
Sbjct: 453 MGK 445
>gb|DV463383.1|DV463383 MTUNUL1.P15.C02 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 853
Score = 123 bits (263), Expect = 1e-027
Identities = 43/56 (76%), Positives = 52/56 (92%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIIT 176
KKIKNPNYQGKWKAP+IDNPDFKDDP +Y + L+Y+GIELWQVKSGTLFDN++++
Sbjct: 684 KKIKNPNYQGKWKAPIIDNPDFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVS 851
>gb|CK100090.1|CK100090 B008P57.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B008P57 5', mRNA sequence
Length = 354
Score = 122 bits (261), Expect = 2e-027
Identities = 42/72 (58%), Positives = 58/72 (80%)
Frame = +3 / +1
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
E+KKIKNPNY+GKWK P IDNP+F+DDP +Y +KY+GIE+WQVK+G++FDNI+I DD
Sbjct: 1 ERKKIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSIFDNILICDD 180
Query: 183 PALAKTFAEETW 218
P A+ ++ +
Sbjct: 181 PQYAREIVKDVF 216
>gb|CN518016.1|CN518016 GQ0092.B3_C12 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0092_C12 5', mRNA sequence
Length = 595
Score = 121 bits (258), Expect = 6e-027
Identities = 42/70 (60%), Positives = 57/70 (81%)
Frame = +3 / +1
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
++KKIKNPNY+GKWK P IDNP+F+DDP +Y +KY+GIE+WQVK+G++FDNI+I DD
Sbjct: 292 KRKKIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPVKYVGIEVWQVKAGSIFDNILICDD 471
Query: 183 PALAKTFAEE 212
P A+ E+
Sbjct: 472 PQYAREVVED 501
>gb|BI139333.1|BI139333 F129P50Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 551
Score = 120 bits (257), Expect = 9e-027
Identities = 41/72 (56%), Positives = 58/72 (80%)
Frame = +3 / +2
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
++KKIKNPNY+GKWK P IDNP+F+DDP +Y +KY+GIE+WQVK+G++FDNI+I DD
Sbjct: 335 KRKKIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSIFDNILICDD 514
Query: 183 PALAKTFAEETW 218
P A+ ++ +
Sbjct: 515 PQYAREIVKDVF 550
>gb|BP932706.1|BP932706 BP932706 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-039_M18.r 3', mRNA sequence
Length = 657
Score = 119 bits (255), Expect = 2e-026
Identities = 43/64 (67%), Positives = 53/64 (82%)
Frame = +3 / -1
Query: 33 QGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAKTFAEE 212
QGKWKAP +DNPDFKDDP +Y + +L+Y+GIEL QVKSGTLF N++++DDP AK EE
Sbjct: 657 QGKWKAPKMDNPDFKDDPELYVYPNLRYVGIELRQVKSGTLFGNVLVSDDPEYAKQLVEE 478
Query: 213 TWGK 224
TWGK
Sbjct: 477 TWGK 466
>gb|AI166964.1|AI166964 xylem.est.744 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 638
Score = 118 bits (253), Expect = 3e-026
Identities = 40/72 (55%), Positives = 57/72 (79%)
Frame = +3 / +1
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
++KKIKNPNY+GKWK P IDNP+F+DDP +Y +KY+GIE+WQVK+G++FDNI+I DD
Sbjct: 112 KRKKIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSIFDNILICDD 291
Query: 183 PALAKTFAEETW 218
P + ++ +
Sbjct: 292 PQYGREIVKDVF 327
>gb|AJ769501.1|AJ769501 AJ769501 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001000008D03F1, mRNA sequence
Length = 404
Score = 118 bits (253), Expect = 3e-026
Identities = 41/68 (60%), Positives = 56/68 (82%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y +KYIGI++WQVK+G+++DNI++ DDP
Sbjct: 109 KRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYIGIDVWQVKAGSVYDNILVCDDPE 288
Query: 189 LAKTFAEE 212
AK A+E
Sbjct: 289 YAKQVAQE 312
>gb|CV254665.1|CV254665 WS0241.B21_N13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0241_N13 3', mRNA sequence
Length = 919
Score = 118 bits (253), Expect = 3e-026
Identities = 41/68 (60%), Positives = 56/68 (82%)
Frame = +3 / -1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y +KYIGI++WQVK+G+++DNI++ DDP
Sbjct: 670 KRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYIGIDVWQVKAGSVYDNILVCDDPE 491
Query: 189 LAKTFAEE 212
AK A+E
Sbjct: 490 YAKQVAQE 467
>gb|CV269227.1|CV269227 WS0207.B21_K17 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0207_K17 3', mRNA sequence
Length = 680
Score = 118 bits (253), Expect = 3e-026
Identities = 41/68 (60%), Positives = 56/68 (82%)
Frame = +3 / -1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y +KYIGI++WQVK+G+++DNI++ DDP
Sbjct: 266 KRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYIGIDVWQVKAGSVYDNILVCDDPE 87
Query: 189 LAKTFAEE 212
AK A+E
Sbjct: 86 YAKQVAQE 63
>gb|CV271150.1|CV271150 WS0153.B21_O20 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0153_O20 3', mRNA sequence
Length = 930
Score = 118 bits (253), Expect = 3e-026
Identities = 41/68 (60%), Positives = 56/68 (82%)
Frame = +3 / -2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y +KYIGI++WQVK+G+++DNI++ DDP
Sbjct: 266 KRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYIGIDVWQVKAGSVYDNILVCDDPE 87
Query: 189 LAKTFAEE 212
AK A+E
Sbjct: 86 YAKQVAQE 63
>gb|DT474424.1|DT474424 WS01231.BR_O01 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_O01 5', mRNA sequence
Length = 687
Score = 118 bits (253), Expect = 3e-026
Identities = 41/68 (60%), Positives = 56/68 (82%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y +KYIGI++WQVK+G+++DNI++ DDP
Sbjct: 60 KRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYIGIDVWQVKAGSVYDNILVCDDPE 239
Query: 189 LAKTFAEE 212
AK A+E
Sbjct: 240 YAKQVAQE 263
>gb|DT477072.1|DT477072 WS01231.B21_O01 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_O01 3', mRNA sequence
Length = 687
Score = 118 bits (253), Expect = 3e-026
Identities = 41/68 (60%), Positives = 56/68 (82%)
Frame = +3 / -3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y +KYIGI++WQVK+G+++DNI++ DDP
Sbjct: 628 KRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYIGIDVWQVKAGSVYDNILVCDDPE 449
Query: 189 LAKTFAEE 212
AK A+E
Sbjct: 448 YAKQVAQE 425
>gb|BU814467.1|BU814467 N030aB03 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 620
Score = 116 bits (249), Expect = 1e-025
Identities = 40/68 (58%), Positives = 55/68 (80%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y +KYIGI++WQVK+G+++DNI++ DDP
Sbjct: 388 KRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYIGIDVWQVKAGSVYDNILVCDDPE 567
Query: 189 LAKTFAEE 212
AK +E
Sbjct: 568 YAKQVVQE 591
>gb|CX658102.1|CX658102 PO01009D09 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01009D09 5', mRNA sequence
Length = 670
Score = 116 bits (249), Expect = 1e-025
Identities = 40/68 (58%), Positives = 55/68 (80%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y +KYIGI++WQVK+G+++DNI++ DDP
Sbjct: 284 KRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYIGIDVWQVKAGSVYDNILVCDDPE 463
Query: 189 LAKTFAEE 212
AK +E
Sbjct: 464 YAKQVVQE 487
>gb|CX659734.1|CX659734 PO01013D05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01013D05 5', mRNA sequence
Length = 569
Score = 116 bits (249), Expect = 1e-025
Identities = 40/68 (58%), Positives = 55/68 (80%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y +KYIGI++WQVK+G+++DNI++ DDP
Sbjct: 284 KRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYIGIDVWQVKAGSVYDNILVCDDPE 463
Query: 189 LAKTFAEE 212
AK +E
Sbjct: 464 YAKQVVQE 487
>gb|BU814549.1|BU814549 N030bB03 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 616
Score = 116 bits (247), Expect = 2e-025
Identities = 40/68 (58%), Positives = 54/68 (79%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y +KYIGI++WQVK+G+ +DNI++ DDP
Sbjct: 407 KRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYIGIDVWQVKAGSXYDNILVCDDPE 586
Query: 189 LAKTFAEE 212
AK +E
Sbjct: 587 YAKQVVQE 610
>gb|BP933065.1|BP933065 BP933065 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-046_E16.r 3', mRNA sequence
Length = 588
Score = 114 bits (243), Expect = 7e-025
Identities = 40/58 (68%), Positives = 49/58 (84%)
Frame = +3 / -2
Query: 51 PMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAKTFAEETWGK 224
P IDNPDFKDDP +Y + +L+Y+GIELWQVKSGTLFDN++++DDP AK EETWGK
Sbjct: 587 PKIDNPDFKDDPELYVYPNLRYVGIELWQVKSGTLFDNVLVSDDPEYAKQLVEETWGK 414
>gb|CX168664.1|CX168664 G03_69-68_13.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 694
Score = 108 bits (230), Expect = 5e-023
Identities = 36/58 (62%), Positives = 50/58 (86%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
K+IKNPNY+GKWK P IDNP+F+DDP +Y +KYIGI++WQVK+G+++DNI++ DD
Sbjct: 519 KRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYIGIDVWQVKAGSVYDNILVCDD 692
>gb|CA822515.1|CA822515 R09C04 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 305
Score = 65.7 bits (137), Expect(2) = 6e-022
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +3 / +1
Query: 36 GKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQ 137
GKWK P+IDNP FK DP +Y + L Y+GIELWQ
Sbjct: 1 GKWKGPIIDNPXFKXDPELYVYPDLXYVGIELWQ 102
Score = 57.9 bits (120), Expect(2) = 6e-022
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +3 / +2
Query: 117 IGIELWQVKSGTLFDNIIITDDPALAKTFAEETWGK 224
+ + ++KSGTLFDN++++DDP AK AEETWGK
Sbjct: 83 LALSCGRMKSGTLFDNVLVSDDPEYAKQMAEETWGK 190
>gb|CV266912.1|CV266912 WS02030.B21_F01 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02030_F01 3', mRNA sequence
Length = 872
Score = 103 bits (219), Expect = 2e-021
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = +3 / +3
Query: 18 KNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAK 197
+N ++Q + + FKDDP +Y + L+Y+GIELWQVKSGTLFDN++++DDP AK
Sbjct: 597 RNQDHQASHQIQPLSPQHFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVSDDPEYAK 776
Query: 198 TFAEETWGK 224
AEETWGK
Sbjct: 777 QMAEETWGK 803
>gb|DT524098.1|DT524098 WS02041.C21.1_I17 PTxN-IB-N-A-11 Populus trichocarpa x Populus
nigra cDNA clone WS02041_I17 3', mRNA sequence
Length = 920
Score = 103 bits (219), Expect = 2e-021
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = +3 / +2
Query: 18 KNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAK 197
+N ++Q + + FKDDP +Y + L+Y+GIELWQVKSGTLFDN++++DDP AK
Sbjct: 596 RNQDHQASHQIQPLSPQHFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVSDDPEYAK 775
Query: 198 TFAEETWGK 224
AEETWGK
Sbjct: 776 QMAEETWGK 802
>gb|AJ767259.1|AJ767259 AJ767259 Populus euphratica leaf adult Populus euphratica cDNA
clone P0000100003G03F1, mRNA sequence
Length = 599
Score = 101 bits (215), Expect = 5e-021
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +3 / +2
Query: 69 DFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAKTFAEETWGK 224
DFKDDP +Y + L+Y+GIELWQVKSGTLFDN+++ DDP AK AEETWGK
Sbjct: 2 DFKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVCDDPEYAKQMAEETWGK 157
>gb|CK109845.1|CK109845 N030B03 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N030B03 5', mRNA sequence
Length = 636
Score = 70.7 bits (148), Expect(2) = 1e-020
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYI 119
K+IKNPNY+GKWK P IDNP+F+DDP +Y +KYI
Sbjct: 409 KRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYI 519
Score = 49.2 bits (101), Expect(2) = 1e-020
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +3 / +2
Query: 120 GIELWQVKSGTLFDNIIITDDPALAKTFAEE 212
GI++WQVK+G+++DNI++ DDP AK +E
Sbjct: 521 GIDVWQVKAGSVYDNILVCDDPEYAKQVVQE 613
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 294,865,088
Number of Sequences: 369679
Number of extensions: 3684539
Number of successful extensions: 65446
Number of sequences better than 1.0e-020: 47
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 9181540620
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)