TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 11001390.3.1
(588 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA931640.1|CA931640 MTU4TA.P21.A10 Aspen apex cDNA Libra... 137 5e-057
gb|CX183675.1|CX183675 F04_45-18_12.ab1 leaf inoculated wit... 133 4e-050
gb|CA931811.1|CA931811 MTU4TA.P23.C02 Aspen apex cDNA Libra... 131 5e-049
gb|CX182477.1|CX182477 C09_45-56_05.ab1 leaf inoculated wit... 138 1e-046
gb|DT512757.1|DT512757 WS02420.B21_C18 PTxD-ICC-N-A-14 Popu... 128 5e-046
gb|AJ780557.1|AJ780557 AJ780557 Populus euphratica leaf 3-6... 109 1e-041
gb|CA926532.1|CA926532 MTU6CR.P16.B04 Aspen root cDNA Libra... 104 6e-039
gb|CX178017.1|CX178017 A02_45-39_02.ab1 leaf inoculated wit... 138 2e-038
gb|CK107056.1|CK107056 UB45DPA02.5pR Populus active cambium... 134 4e-031
gb|CX180811.1|CX180811 A05_45-68_01.ab1 leaf inoculated wit... 76 6e-024
gb|CX181405.1|CX181405 G04_45-84_14.ab1 leaf inoculated wit... 80 9e-015
gb|CX186779.1|CX186779 A06_45-26_02.ab1 leaf inoculated wit... 71 5e-012
gb|CN524398.1|CN524398 GQ015M14.T3_B10 GQ015 Populus tricho... 65 3e-010
gb|BU878208.1|BU878208 V044D06 Populus flower cDNA library ... 63 1e-009
gb|DN502013.1|DN502013 V044D06.5pR Populus male catkins cDN... 63 1e-009
gb|DN494593.1|DN494593 M111F05.5pR Populus female catkins c... 57 1e-007
gb|DN503025.1|DN503025 X052A07.5pR Populus wood cDNA librar... 56 3e-007
gb|DV466288.1|DV466288 MTUNUL1.P49.F09 NUL Populus fremonti... 48 4e-005
gb|BI071943.1|BI071943 C066P45U Populus strain T89 leaves P... 40 2e-004
gb|CX185985.1|CX185985 C05_45-1_05.ab1 leaf inoculated with... 46 3e-004
gb|AJ771539.1|AJ771539 AJ771539 Populus euphratica root 3-6... 44 7e-004
gb|AJ780410.1|AJ780410 AJ780410 Populus euphratica leaf 3-6... 40 0.009
gb|CV269368.1|CV269368 WS0208.B21_B06 PTxN-IB-N-A-11 Populu... 34 0.79
gb|DT508139.1|DT508139 WS02420.BR_C18 PTxD-ICC-N-A-14 Popul... 34 0.79
gb|CK097719.1|CK097719 UB59CPE09.3pR Populus active cambium... 28 0.92
gb|CV244970.1|CV244970 WS0256.B21_C05 PT-MB-N-A-15 Populus ... 28 1.6
gb|DT488357.1|DT488357 WS02536.B21_D10 PT-MB-N-A-15 Populus... 28 1.7
gb|DT516049.1|DT516049 WS02430.B21_E03 PTxD-ICC-N-A-14 Popu... 28 1.7
gb|DT485206.1|DT485206 WS02527.B21_J07 PT-MB-N-A-15 Populus... 28 1.7
gb|CV226286.1|CV226286 WS0163.B21_N06 PT-DX-A-7 Populus tri... 33 2.0
gb|CV236602.1|CV236602 WS01224.B21.1_L05 PT-GT-FL-A-3 Popul... 33 2.0
gb|CN523993.1|CN523993 GQ015M10.T3_H04 GQ015 Populus tricho... 32 3.9
gb|BU832008.1|BU832008 T028D04 Populus apical shoot cDNA li... 31 7.3
gb|DN499130.1|DN499130 T028D04.5pR Populus shoot meristem c... 31 7.3
gb|DT486324.1|DT486324 WS02530.B21_K14 PT-MB-N-A-15 Populus... 31 7.3
gb|AJ772460.1|AJ772460 AJ772460 Populus euphratica shoot in... 26 7.6
>gb|CA931640.1|CA931640 MTU4TA.P21.A10 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 711
Score = 137 bits (293), Expect(4) = 5e-057
Identities = 53/73 (72%), Positives = 58/73 (79%)
Frame = +2 / -3
Query: 56 FLSTWGSLQNYYMYFGGTNFERTAGGPLQITSYDYDAPIDEYGILRQPKWGHLKDLHAAI 235
F+ GS NYYMY GGTNF RTAGGP TSYDYDAP+DEYG+LRQPKWGHLKDLH AI
Sbjct: 577 FIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAI 398
Query: 236 KLCESALTAVDGS 274
KLCE AL + D +
Sbjct: 397 KLCEPALVSGDAT 359
Score = 90.0 bits (190), Expect(2) = 4e-023
Identities = 43/66 (65%), Positives = 46/66 (69%)
Frame = -1 / +3
Query: 267 STAVRADSQSLIAACRSFKCPHLGCLKIPYSSIGAS*S*LVI*SGPPAVRSKLVPPKYM* 88
S +A S SLIA C+SFK PHLGC PYSS GAS*S*LV GPPAVR K VPP Y+*
Sbjct: 366 SPDTKAGSHSLIALCKSFKWPHLGCRNSPYSSRGAS*S*LVAMKGPPAVRPKFVPP*YI* 545
Query: 87 *FCKLP 70
*F P
Sbjct: 546 *FMNDP 563
Score = 74.8 bits (157), Expect(4) = 5e-057
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +2 / -3
Query: 371 CSAFLANIDEHKYASVWIFGKSYSLPPWSVSILPDCETVAFNTARVGTQTSXFNV 535
C+AFLAN + +A V Y+LPPWS+SILPDC+ +NTARVG Q++ +
Sbjct: 301 CAAFLANYHQRSFAKVSFRNMHYNLPPWSISILPDCKNTVYNTARVGAQSTTIKM 137
Score = 57.9 bits (120), Expect(2) = 7e-011
Identities = 31/80 (38%), Positives = 37/80 (46%)
Frame = -2 / +1
Query: 269 HLLQ*ELIHKV**LHVGLSNAPT*VVLRYHIRQLVHHNHS*LSEVDHQLSAQNWFHQNTC 90
HL + +H * L+ LSN P * HI Q HHNHS L DHQ QN F +T
Sbjct: 364 HLQILKRVHTA*LLYANLSNGPI*AAATVHIHQEEHHNHSLLQ*KDHQQFGQNLFLHDTY 543
Query: 89 NNFVSFPTLIKTSNSKSTVL 30
NN P + T + L
Sbjct: 544 NNL*MIPPSV*TLQRREPCL 603
Score = 55.1 bits (114), Expect(2) = 3e-008
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = -3 / +2
Query: 247 FTKFNSCM*VFQMPPLRLS*DTIFVNWCIIIIASYLKWTTSCPLKIGSTKIHVIIL*ASP 68
FT+ N M +FQM P RL +IF+ IIIIA + TTS KI S+ IH+II SP
Sbjct: 386 FTQLNCSMQIFQMAPFRLPQQSIFIKRSIIIIACCNERTTSSSAKICSSMIHIIIYE*SP 565
Score = 54.2 bits (112), Expect(2) = 1e-008
Identities = 25/50 (50%), Positives = 33/50 (66%)
Frame = +1 / -2
Query: 70 GKLTKLLHVFWWNQF*ADSWWSTSDN*L*L*CTN*RIWYLKTT*VGAFER 219
G + KLL+V W N+F + WWS N L*L*C++* IW + *+G FER
Sbjct: 563 GIIHKLLYVSWRNKFWPNCWWSFHCNKL*L*CSS**IWTVAAA*MGPFER 414
Score = 42.3 bits (86), Expect(2) = 9e-005
Identities = 26/53 (49%), Positives = 32/53 (60%)
Frame = +3 / -1
Query: 60 YQRGEAYKIITCILVEPILSGQLVVHFR*LAMIMMHQLTNMVS*DNLSGGI*K 218
Y+RG+ II CI+ E IL+ LVV AMIMM L NM +L+G I*K
Sbjct: 573 YRRGDHS*IIICIMEEQILAELLVVLSLQQAMIMMLLLMNMDCCGSLNGAI*K 415
Score = 39.6 bits (80), Expect(4) = 5e-057
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3 / -3
Query: 3 GESLPHRPAQDSAFAVARFYQRGEAY 80
G +PHRPA+D A +VARF Q+G ++
Sbjct: 631 GGPVPHRPAEDMALSVARFIQKGGSF 554
Score = 39.1 bits (79), Expect(2) = 4e-023
Identities = 18/25 (72%), Positives = 18/25 (72%)
Frame = -1 / +3
Query: 510 PTLAVLKATVSQSGSMLTDHGGRL* 436
PTLAVL QSG ML DHGGRL*
Sbjct: 162 PTLAVL*TVFLQSGRMLMDHGGRL* 236
Score = 29.9 bits (59), Expect(2) = 7e-011
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3 / +2
Query: 541 RFDIEXRCLCTNPGCIKSHSFTVW*YAHRPWW*TI 437
R ++ L TNP + + +W A PWW* I
Sbjct: 131 RSHLDRCTLSTNPCSVVNGVLAIWKNADGPWW*VI 235
Score = 26.3 bits (51), Expect(4) = 5e-057
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2 / -3
Query: 263 VDGSPHYVKLGPMQEAHVYSSE 328
V G + LG QEAHV+S E
Sbjct: 376 VSGDATVIPLGNYQEAHVFSYE 311
Score = 25.8 bits (50), Expect(2) = 1e-008
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3 / -1
Query: 435 LIVYHHGL*AYYQTVKLWLLIQPGLVHK 518
+I YHHG A++Q + GLV K
Sbjct: 237 IITYHHGPSAFFQIARTPFTTLQGLVLK 154
Score = 24.4 bits (47), Expect(2) = 9e-005
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1 / -2
Query: 436 L*STTMVCEHTTRL*NCGF*YSQGW 510
L* TTMV +H++RL + +GW
Sbjct: 236 L*PTTMVHQHSSRLQEHRLQHCKGW 162
Score = 22.1 bits (42), Expect(2) = 3e-008
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2 / +2
Query: 323 WNTHVPPAWALILHNEVNHLLQ*ELI 246
W P W +I+H HL +* L+
Sbjct: 200 WKNADGPWW*VIMHIPKRHLCK*SLM 277
>gb|CX183675.1|CX183675 F04_45-18_12.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 589
Score = 133 bits (286), Expect(3) = 4e-050
Identities = 51/76 (67%), Positives = 58/76 (76%)
Frame = +2 / +2
Query: 41 FCCCSFLSTWGSLQNYYMYFGGTNFERTAGGPLQITSYDYDAPIDEYGILRQPKWGHLKD 220
F F+ GS NYYMY GGTNF RTAGGP TSYDYDAP+DE+G+ R+PKWGHL+D
Sbjct: 119 FAVARFIQNGGSYINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEFGLPREPKWGHLRD 298
Query: 221 LHAAIKLCESALTAVD 268
LH AIKLCE AL +VD
Sbjct: 299 LHKAIKLCEPALVSVD 346
Score = 80.8 bits (170), Expect(2) = 4e-019
Identities = 40/66 (60%), Positives = 44/66 (66%)
Frame = -1 / -2
Query: 267 STAVRADSQSLIAACRSFKCPHLGCLKIPYSSIGAS*S*LVI*SGPPAVRSKLVPPKYM* 88
ST +A S SL+A C+S KCPH G L P SS GAS*S*LV GPPAV KLVPP Y+*
Sbjct: 345 STETKAGSHSLMALCKSLKCPHFGSLGNPNSSRGAS*S*LVAMKGPPAVLPKLVPPWYI* 166
Query: 87 *FCKLP 70
* P
Sbjct: 165 *LMYEP 148
Score = 76.2 bits (160), Expect(3) = 4e-050
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +2 / +2
Query: 371 CSAFLANIDEHKYASVWIFGKSYSLPPWSVSILPDCETVAFNTARVGTQTSXFNVESGSP 550
C+AFLAN D V Y LPPWSVSILPDC+TV +NTAR+G+Q+S + S
Sbjct: 407 CAAFLANYDTKYSVKVTFGNGQYELPPWSVSILPDCKTVVYNTARLGSQSSQMKMVPVSS 586
Query: 551 S 553
S
Sbjct: 587 S 589
Score = 45.5 bits (93), Expect(2) = 6e-009
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3 / +2
Query: 3 GESLPHRPAQDSAFAVARFYQRGEAY 80
G ++PHRPA+D AFAVARF Q G +Y
Sbjct: 80 GGAVPHRPAEDMAFAVARFIQNGGSY 157
Score = 34.5 bits (69), Expect(2) = 4e-019
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -1 / -2
Query: 510 PTLAVLKATVSQSGSMLTDHGG 445
P+LAVL TV QSG +LTD GG
Sbjct: 546 PSLAVL*TTVLQSGRILTDQGG 481
Score = 34.1 bits (68), Expect = 0.79
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = -3 / -1
Query: 247 FTKFNSCM*VFQMPPLRLS*DTIFVNWCIIIIASYLKWTTSCPLKIGSTKIHVII 83
FT + + + QMPPL + F+ III+AS + T S ++ S+ +H+++
Sbjct: 325 FT*LDGFVQISQMPPLWFPW*SEFIKRGIIIVASGNEGTASGSSEVSSSMVHIVV 161
Score = 34.1 bits (68), Expect(2) = 6e-009
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +1 / +1
Query: 85 LLHVFWWNQF*ADSWWSTSDN*L*L*CTN*RIWYLKTT*VGAFER 219
LL+V W N + W S +*L L*C +* I K T VGAFER
Sbjct: 163 LLYVPWRN*LRKNRWRSLHCH*LRL*CPS**IRITKGTKVGAFER 297
Score = 33.1 bits (66), Expect = 1.5
Identities = 20/41 (48%), Positives = 21/41 (51%)
Frame = -2 / -3
Query: 248 IHKV**LHVGLSNAPT*VVLRYHIRQLVHHNHS*LSEVDHQ 126
+H * L LSNAPT V L I Q HHN S* D Q
Sbjct: 326 VHIA*WLCANLSNAPTLVPLVIRIHQEGHHNRS*WQ*RDRQ 204
Score = 26.3 bits (51), Expect(3) = 4e-050
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2 / +2
Query: 263 VDGSPHYVKLGPMQEAHVYSSENV 334
V P LG QEAHV+ S++V
Sbjct: 335 VSVDPTVTSLGSNQEAHVFKSKSV 406
>gb|CA931811.1|CA931811 MTU4TA.P23.C02 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 558
Score = 131 bits (281), Expect(3) = 5e-049
Identities = 50/64 (78%), Positives = 54/64 (84%)
Frame = +2 / -3
Query: 83 NYYMYFGGTNFERTAGGPLQITSYDYDAPIDEYGILRQPKWGHLKDLHAAIKLCESALTA 262
NYYMY GGTNF RTAGGP TSYDYDAP+DEYG+LRQPKWGHLKDLH AIKLCE AL +
Sbjct: 550 NYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLCEPALVS 371
Query: 263 VDGS 274
D +
Sbjct: 370 GDAT 359
Score = 89.0 bits (188), Expect(2) = 6e-023
Identities = 42/62 (67%), Positives = 45/62 (72%)
Frame = -1 / +3
Query: 267 STAVRADSQSLIAACRSFKCPHLGCLKIPYSSIGAS*S*LVI*SGPPAVRSKLVPPKYM* 88
S +A S SLIA C+SFK PHLGC PYSS GAS*S*LV GPPAVR K VPP Y+*
Sbjct: 366 SPDTKAGSHSLIALCKSFKWPHLGCRNSPYSSRGAS*S*LVAMKGPPAVRPKFVPP*YI* 545
Query: 87 *F 82
*F
Sbjct: 546 *F 551
Score = 74.8 bits (157), Expect(3) = 5e-049
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +2 / -3
Query: 371 CSAFLANIDEHKYASVWIFGKSYSLPPWSVSILPDCETVAFNTARVGTQTSXFNV 535
C+AFLAN + +A V Y+LPPWS+SILPDC+ +NTARVG Q++ +
Sbjct: 301 CAAFLANYHQRSFAKVSFRNMHYNLPPWSISILPDCKNTVYNTARVGAQSTTIKM 137
Score = 56.1 bits (116), Expect(2) = 2e-010
Identities = 28/62 (45%), Positives = 32/62 (51%)
Frame = -2 / +1
Query: 269 HLLQ*ELIHKV**LHVGLSNAPT*VVLRYHIRQLVHHNHS*LSEVDHQLSAQNWFHQNTC 90
HL + +H * L+ LSN P * HI Q HHNHS L DHQ QN F +T
Sbjct: 364 HLQILKRVHTA*LLYANLSNGPI*AAATVHIHQEEHHNHSLLQ*KDHQQFGQNLFLHDTY 543
Query: 89 NN 84
NN
Sbjct: 544 NN 549
Score = 54.2 bits (112), Expect(2) = 5e-008
Identities = 27/55 (49%), Positives = 34/55 (61%)
Frame = -3 / +2
Query: 247 FTKFNSCM*VFQMPPLRLS*DTIFVNWCIIIIASYLKWTTSCPLKIGSTKIHVII 83
FT+ N M +FQM P RL +IF+ IIIIA + TTS KI S+ IH+II
Sbjct: 386 FTQLNCSMQIFQMAPFRLPQQSIFIKRSIIIIACCNERTTSSSAKICSSMIHIII 550
Score = 52.8 bits (109), Expect(2) = 3e-008
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +1 / -2
Query: 82 KLLHVFWWNQF*ADSWWSTSDN*L*L*CTN*RIWYLKTT*VGAFER 219
KLL+V W N+F + WWS N L*L*C++* IW + *+G FER
Sbjct: 551 KLLYVSWRNKFWPNCWWSFHCNKL*L*CSS**IWTVAAA*MGPFER 414
Score = 39.1 bits (79), Expect(2) = 6e-023
Identities = 18/25 (72%), Positives = 18/25 (72%)
Frame = -1 / +3
Query: 510 PTLAVLKATVSQSGSMLTDHGGRL* 436
PTLAVL QSG ML DHGGRL*
Sbjct: 162 PTLAVL*TVFLQSGRMLMDHGGRL* 236
Score = 36.3 bits (73), Expect(2) = 0.004
Identities = 23/45 (51%), Positives = 27/45 (60%)
Frame = +3 / -1
Query: 84 IITCILVEPILSGQLVVHFR*LAMIMMHQLTNMVS*DNLSGGI*K 218
II CI+ E IL+ LVV AMIMM L NM +L+G I*K
Sbjct: 549 IIICIMEEQILAELLVVLSLQQAMIMMLLLMNMDCCGSLNGAI*K 415
Score = 29.9 bits (59), Expect(2) = 2e-010
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3 / +2
Query: 541 RFDIEXRCLCTNPGCIKSHSFTVW*YAHRPWW*TI 437
R ++ L TNP + + +W A PWW* I
Sbjct: 131 RSHLDRCTLSTNPCSVVNGVLAIWKNADGPWW*VI 235
Score = 26.3 bits (51), Expect(3) = 5e-049
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2 / -3
Query: 263 VDGSPHYVKLGPMQEAHVYSSE 328
V G + LG QEAHV+S E
Sbjct: 376 VSGDATVIPLGNYQEAHVFSYE 311
Score = 25.8 bits (50), Expect(2) = 3e-008
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3 / -1
Query: 435 LIVYHHGL*AYYQTVKLWLLIQPGLVHK 518
+I YHHG A++Q + GLV K
Sbjct: 237 IITYHHGPSAFFQIARTPFTTLQGLVLK 154
Score = 24.4 bits (47), Expect(2) = 0.004
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1 / -2
Query: 436 L*STTMVCEHTTRL*NCGF*YSQGW 510
L* TTMV +H++RL + +GW
Sbjct: 236 L*PTTMVHQHSSRLQEHRLQHCKGW 162
Score = 22.1 bits (42), Expect(2) = 5e-008
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2 / +2
Query: 323 WNTHVPPAWALILHNEVNHLLQ*ELI 246
W P W +I+H HL +* L+
Sbjct: 200 WKNADGPWW*VIMHIPKRHLCK*SLM 277
>gb|CX182477.1|CX182477 C09_45-56_05.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 669
Score = 138 bits (296), Expect(3) = 1e-046
Identities = 54/78 (69%), Positives = 59/78 (75%)
Frame = +2 / +3
Query: 41 FCCCSFLSTWGSLQNYYMYFGGTNFERTAGGPLQITSYDYDAPIDEYGILRQPKWGHLKD 220
F F+ GS NYYMY GGTNF RTAGGP TSYDYDAP+DEYG+LRQPKWGHLKD
Sbjct: 249 FSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKD 428
Query: 221 LHAAIKLCESALTAVDGS 274
LH AIKLCE AL + D +
Sbjct: 429 LHRAIKLCEPALVSGDAT 482
Score = 92.7 bits (196), Expect(2) = 3e-021
Identities = 44/66 (66%), Positives = 47/66 (71%)
Frame = -1 / -3
Query: 267 STAVRADSQSLIAACRSFKCPHLGCLKIPYSSIGAS*S*LVI*SGPPAVRSKLVPPKYM* 88
S +A S SLIA C+SFK PHLGCL PYSS GAS*S*LV GPPAVR K VPP Y+*
Sbjct: 475 SPDTKAGSHSLIARCKSFKWPHLGCLNSPYSSRGAS*S*LVAMKGPPAVRPKFVPP*YI* 296
Query: 87 *FCKLP 70
*F P
Sbjct: 295 *FMNDP 278
Score = 62.5 bits (130), Expect(3) = 1e-046
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +2 / +3
Query: 371 CSAFLANIDEHKYASVWIFGKSYSLPPWSVSILPDCETVAFNT 499
C+AFLAN + +A V Y+LPPWS+SILPDC+ +NT
Sbjct: 540 CAAFLANYHQRSFAKVSFRNMHYNLPPWSISILPDCKNTVYNT 668
Score = 52.8 bits (109), Expect(2) = 2e-013
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +1 / +2
Query: 70 GKLTKLLHVFWWNQF*ADSWWSTSDN*L*L*CTN*RIWYLKTT*VGAFER 219
G + KLL+V W ++F + WWS N L*L C++* IW +K *+G FER
Sbjct: 278 GVIHKLLYVSWRDKFWPNCWWSFHCNKL*LRCSS**IWTVKAA*MGPFER 427
Score = 50.6 bits (104), Expect = 9e-006
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = -3 / -2
Query: 247 FTKFNSCM*VFQMPPLRLS*DTIFVNWCIIIIASYLKWTTSCPLKIGSTKIHVII 83
FT+ N M +FQM P RL * +IF+ I+II + TTS KI + IH+I+
Sbjct: 455 FTQLNCPMQIFQMAPFRLP*QSIFIKRSIVIITCCNERTTSSSAKICPSMIHIIV 291
Score = 44.6 bits (91), Expect = 5e-004
Identities = 28/80 (35%), Positives = 34/80 (42%)
Frame = -2 / -1
Query: 269 HLLQ*ELIHKV**LHVGLSNAPT*VVLRYHIRQLVHHNHS*LSEVDHQLSAQNWFHQNTC 90
HL + +H * LSN P * L HI Q H NH+ L DHQ QN +T
Sbjct: 477 HLQILKRVHTA*LPDANLSNGPI*AALTVHIHQEEHRNHNLLQ*KDHQQFGQNLSLHDTY 298
Query: 89 NNFVSFPTLIKTSNSKSTVL 30
N+ P + T K L
Sbjct: 297 NSL*MTPPSV*TLQPKMPCL 238
Score = 42.3 bits (86), Expect(2) = 2e-013
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3 / +3
Query: 3 GESLPHRPAQDSAFAVARFYQRGEAY 80
G +PHRPA+D AF+VARF Q+G ++
Sbjct: 210 GGPVPHRPAEDMAFSVARFIQKGGSF 287
Score = 33.1 bits (66), Expect = 1.5
Identities = 24/59 (40%), Positives = 30/59 (50%)
Frame = +3 / +1
Query: 42 FAVARFYQRGEAYKIITCILVEPILSGQLVVHFR*LAMIMMHQLTNMVS*DNLSGGI*K 218
F + Y+RG I CI+ IL+ LVV MI M L NM * +L+G I*K
Sbjct: 250 FRLQGSYRRGGHS*TIICIMEGQILAELLVVLSLQQVMITMLLLMNMDC*GSLNGAI*K 426
Score = 29.9 bits (59), Expect(2) = 3e-021
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1 / -3
Query: 498 VLKATVSQSGSMLTDHGGRL* 436
VL QSG ML DHGGRL*
Sbjct: 667 VL*TVFLQSGRMLMDHGGRL* 605
Score = 23.5 bits (45), Expect(3) = 1e-046
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2 / +3
Query: 263 VDGSPHYVKLGPMQEAHVYS 322
V G + LG QEAHV++
Sbjct: 465 VSGDATVIPLGNYQEAHVFN 524
>gb|DT512757.1|DT512757 WS02420.B21_C18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_C18 3', mRNA sequence
Length = 869
Score = 128 bits (274), Expect(3) = 5e-046
Identities = 50/72 (69%), Positives = 54/72 (75%)
Frame = +2 / -2
Query: 41 FCCCSFLSTWGSLQNYYMYFGGTNFERTAGGPLQITSYDYDAPIDEYGILRQPKWGHLKD 220
F F GS+QNYYMY GGTNF RTAGGP TSYDY+APIDEYG+ R PKWGHLK+
Sbjct: 772 FSVARFFQKGGSVQNYYMYHGGTNFGRTAGGPFITTSYDYEAPIDEYGLPRLPKWGHLKE 593
Query: 221 LHAAIKLCESAL 256
LH AIKLCE L
Sbjct: 592 LHKAIKLCEHVL 557
Score = 93.2 bits (197), Expect(3) = 2e-027
Identities = 44/72 (61%), Positives = 49/72 (68%)
Frame = -1 / +3
Query: 255 RADSQSLIAACRSFKCPHLGCLKIPYSSIGAS*S*LVI*SGPPAVRSKLVPPKYM**FCK 76
R S + IA SF+CPH G L PYSSIGAS*S*LV+ +GPPAVR K VPP YM**FC
Sbjct: 558 RTCSHNFIAL*SSFRCPHFGSLGKPYSSIGAS*S*LVVMNGPPAVRPKFVPPWYM**FCT 737
Query: 75 LPHVDKNEQQQK 40
LP K +K
Sbjct: 738 LPPFWKKRATEK 773
Score = 70.7 bits (148), Expect(3) = 5e-046
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +2 / -2
Query: 371 CSAFLANIDEHKYASVWIFGKSYSLPPWSVSILPDCETVAFNTARVGTQTS 523
C AFLANID+ +V SY LP WSVSILPDC+ V +NTA+V +QT+
Sbjct: 481 CVAFLANIDDKNDKTVEFQNVSYKLPAWSVSILPDCKNVVYNTAKVTSQTA 329
Score = 52.8 bits (109), Expect = 2e-006
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = -3 / +2
Query: 232 SCM*VFQMPPLRLS*DTIFVNWCIIIIASYLKWTTSCPLKIGSTKIHVIIL 80
S M Q+ PL TIF+NWC+III +W+T KI S+ +HVIIL
Sbjct: 581 SFMKFLQVSPLW*PRQTIFINWCLIIITCCNEWSTCSATKICSSMVHVIIL 733
Score = 46.0 bits (94), Expect = 2e-004
Identities = 23/46 (50%), Positives = 25/46 (54%)
Frame = -2 / +1
Query: 215 SNAPT*VVLRYHIRQLVHHNHS*LSEVDHQLSAQNWFHQNTCNNFV 78
S PT V HI QLV HNH+ L + H QN F TCNNFV
Sbjct: 598 SGVPTLVA*ANHIHQLVPHNHNLL**MVHLQCDQNLFLHGTCNNFV 735
Score = 45.5 bits (93), Expect(2) = 4e-011
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = +1 / -1
Query: 79 TKLLHVFWWNQF*ADSWWSTSDN*L*L*CTN*RIWYLKTT*VGAFERPTCSY 234
TKLLHV W N+F + W+ N L*L* TN* IW+ T VG E + SY
Sbjct: 734 TKLLHVPWRNKFWSHCRWTIHYNKL*L*GTN**IWFA*ATKVGTPEGTS*SY 579
Score = 43.7 bits (89), Expect = 0.001
Identities = 24/56 (42%), Positives = 29/56 (51%)
Frame = +3 / -3
Query: 57 FYQRGEAYKIITCILVEPILSGQLVVHFR*LAMIMMHQLTNMVS*DNLSGGI*KTY 224
F ++ YKIITC + E IL V H MIM HQL NMV SG *+ +
Sbjct: 756 FSRKVAVYKIITCTMEEQILVALQVDHSLQQVMIMRHQLMNMVCLGYQSGDT*RNF 589
Score = 42.8 bits (87), Expect(3) = 2e-027
Identities = 25/46 (54%), Positives = 25/46 (54%)
Frame = -1 / +3
Query: 507 TLAVLKATVSQSGSMLTDHGGRL*DFPKIQTEAYLCSSMLARKAEQ 370
T AVL T QSG MLTD G L D T SSMLARKA Q
Sbjct: 345 TFAVLYTTFLQSGRMLTDQAGSLYDTF*NSTVLSFLSSMLARKATQ 482
Score = 41.4 bits (84), Expect(2) = 4e-011
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3 / -2
Query: 3 GESLPHRPAQDSAFAVARFYQRG 71
G PHRPA+D AF+VARF+Q+G
Sbjct: 811 GAPNPHRPAEDVAFSVARFFQKG 743
Score = 24.0 bits (46), Expect(3) = 2e-027
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3 / +3
Query: 58 KRATAKALS*AGLCGNDSP 2
KRAT KA S AGL G +P
Sbjct: 756 KRATEKATSSAGL*GLGAP 812
Score = 23.5 bits (45), Expect(3) = 5e-046
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 263 VDGSPHYVKLGPMQEAHVYS 322
++ P + LGP QEA +Y+
Sbjct: 556 LNSKPVNLSLGPSQEADIYA 497
>gb|AJ780557.1|AJ780557 AJ780557 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900009F04F1, mRNA sequence
Length = 534
Score = 109 bits (232), Expect(2) = 1e-041
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +2 / -3
Query: 101 GGTNFERTAGGPLQITSYDYDAPIDEYGILRQPKWGHLKDLHAAIKLCESALTAVD 268
GGTNF RTAGGP TSY YDAP+DE+G+ R+PKWGHL+DLH AIKLCE AL +VD
Sbjct: 529 GGTNFGRTAGGPFIATSYGYDAPLDEFGLPREPKWGHLRDLHKAIKLCEPALVSVD 362
Score = 80.3 bits (169), Expect(2) = 1e-041
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = +2 / -3
Query: 371 CSAFLANIDEHKYASVWIFGKSYSLPPWSVSILPDCETVAFNTARVGTQTSXFNVESGSP 550
C+AFLAN D V Y LPPWS+SILPDC+TV +NTAR+G+Q+S + S
Sbjct: 301 CAAFLANYDTKYSVKVTFGNGQYELPPWSISILPDCKTVVYNTARLGSQSSQMKMVPASS 122
Query: 551 SYS 559
S+S
Sbjct: 121 SFS 113
Score = 74.8 bits (157), Expect(2) = 4e-017
Identities = 35/56 (62%), Positives = 38/56 (67%)
Frame = -1 / +3
Query: 267 STAVRADSQSLIAACRSFKCPHLGCLKIPYSSIGAS*S*LVI*SGPPAVRSKLVPP 100
ST +A S SL+A C+S KCPH G L P SS GAS* *LV GPPAV KLVPP
Sbjct: 363 STETKAGSHSLMALCKSLKCPHFGSLGNPNSSRGAS*P*LVAMKGPPAVLPKLVPP 530
Score = 33.6 bits (67), Expect(2) = 4e-017
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1 / +3
Query: 510 PTLAVLKATVSQSGSMLTDHGG 445
P+LAVL TV QSG ML D GG
Sbjct: 162 PSLAVL*TTVLQSGRMLMDQGG 227
Score = 33.1 bits (66), Expect = 1.5
Identities = 20/41 (48%), Positives = 21/41 (51%)
Frame = -2 / +1
Query: 248 IHKV**LHVGLSNAPT*VVLRYHIRQLVHHNHS*LSEVDHQ 126
+H * L LSNAPT V L I Q HHN S* D Q
Sbjct: 382 VHIA*WLCANLSNAPTLVPLVIRIHQEGHHNRS*WQ*RDRQ 504
>gb|CA926532.1|CA926532 MTU6CR.P16.B04 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 549
Score = 104 bits (221), Expect(3) = 6e-039
Identities = 40/52 (76%), Positives = 43/52 (82%)
Frame = +2 / +3
Query: 101 GGTNFERTAGGPLQITSYDYDAPIDEYGILRQPKWGHLKDLHAAIKLCESAL 256
GGTNF RTAGGP TSYDY+APIDEYG+ R PKWGHLK+LH AIKLCE L
Sbjct: 3 GGTNFGRTAGGPFITTSYDYEAPIDEYGLPRLPKWGHLKELHKAIKLCEHVL 158
Score = 75.3 bits (158), Expect(2) = 3e-020
Identities = 34/52 (65%), Positives = 38/52 (73%)
Frame = -1 / -3
Query: 255 RADSQSLIAACRSFKCPHLGCLKIPYSSIGAS*S*LVI*SGPPAVRSKLVPP 100
R S + IA SF+CPH G L PYSSIGAS*S*LV+ +GPPAVR K VPP
Sbjct: 157 RTCSHNFIAL*SSFRCPHFGSLGKPYSSIGAS*S*LVVMNGPPAVRPKFVPP 2
Score = 70.7 bits (148), Expect(3) = 6e-039
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +2 / +3
Query: 371 CSAFLANIDEHKYASVWIFGKSYSLPPWSVSILPDCETVAFNTARVGTQTS 523
C AFLANID+ +V SY LP WSVSILPDC+ V +NTA+V +QT+
Sbjct: 234 CVAFLANIDDKNDKTVEFQNVSYKLPAWSVSILPDCKNVVYNTAKVTSQTA 386
Score = 42.8 bits (87), Expect = 0.002
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = -3 / -2
Query: 232 SCM*VFQMPPLRLS*DTIFVNWCIIIIASYLKWTTSCPLKIGST 101
S M + Q+ PL TIF+NWC+III +W+T KI S+
Sbjct: 134 SFMKLLQVSPLWQPRQTIFINWCLIIITCCNEWSTCSATKICSS 3
Score = 42.8 bits (87), Expect(2) = 3e-020
Identities = 25/46 (54%), Positives = 25/46 (54%)
Frame = -1 / -3
Query: 507 TLAVLKATVSQSGSMLTDHGGRL*DFPKIQTEAYLCSSMLARKAEQ 370
T AVL T QSG MLTD G L D T SSMLARKA Q
Sbjct: 370 TFAVLYTTFLQSGRMLTDQAGSLYDTF*NSTVLSFLSSMLARKATQ 233
Score = 31.3 bits (62), Expect = 5.3
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1 / +2
Query: 100 WWNQF*ADSWWSTSDN*L*L*CTN*RIWYLKTT*VGAFERPTCSY 234
W N+F + W+ N L*L* TN* IW+ VG E + SY
Sbjct: 2 WRNKFWSHCRWTIHYNKL*L*GTN**IWFA*AAKVGTPEGAS*SY 136
Score = 24.0 bits (46), Expect(3) = 6e-039
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2 / +3
Query: 263 VDGSPHYVKLGPMQEAHVYS 322
++ P + LGP QEA VY+
Sbjct: 159 LNSKPVNLSLGPSQEADVYA 218
>gb|CX178017.1|CX178017 A02_45-39_02.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 671
Score = 138 bits (296), Expect(3) = 2e-038
Identities = 54/78 (69%), Positives = 59/78 (75%)
Frame = +2 / +2
Query: 41 FCCCSFLSTWGSLQNYYMYFGGTNFERTAGGPLQITSYDYDAPIDEYGILRQPKWGHLKD 220
F F+ GS NYYMY GGTNF RTAGGP TSYDYDAP+DEYG+LRQPKWGHLKD
Sbjct: 281 FSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKD 460
Query: 221 LHAAIKLCESALTAVDGS 274
LH AIKLCE AL + D +
Sbjct: 461 LHRAIKLCEPALVSGDAT 514
Score = 92.7 bits (196), Expect = 2e-018
Identities = 44/66 (66%), Positives = 47/66 (71%)
Frame = -1 / -3
Query: 267 STAVRADSQSLIAACRSFKCPHLGCLKIPYSSIGAS*S*LVI*SGPPAVRSKLVPPKYM* 88
S +A S SLIA C+SFK PHLGCL PYSS GAS*S*LV GPPAVR K VPP Y+*
Sbjct: 507 SPDTKAGSHSLIARCKSFKWPHLGCLNSPYSSRGAS*S*LVAMKGPPAVRPKFVPP*YI* 328
Query: 87 *FCKLP 70
*F P
Sbjct: 327 *FMNDP 310
Score = 52.8 bits (109), Expect(2) = 2e-013
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +1 / +1
Query: 70 GKLTKLLHVFWWNQF*ADSWWSTSDN*L*L*CTN*RIWYLKTT*VGAFER 219
G + KLL+V W ++F + WWS N L*L C++* IW +K *+G FER
Sbjct: 310 GVIHKLLYVSWRDKFWPNCWWSFHCNKL*LRCSS**IWTVKAA*MGPFER 459
Score = 50.6 bits (104), Expect = 9e-006
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = -3 / -2
Query: 247 FTKFNSCM*VFQMPPLRLS*DTIFVNWCIIIIASYLKWTTSCPLKIGSTKIHVII 83
FT+ N M +FQM P RL * +IF+ I+II + TTS KI + IH+I+
Sbjct: 487 FTQLNCPMQIFQMAPFRLP*QSIFIKRSIVIITCCNERTTSSSAKICPSMIHIIV 323
Score = 44.6 bits (91), Expect = 5e-004
Identities = 28/80 (35%), Positives = 34/80 (42%)
Frame = -2 / -1
Query: 269 HLLQ*ELIHKV**LHVGLSNAPT*VVLRYHIRQLVHHNHS*LSEVDHQLSAQNWFHQNTC 90
HL + +H * LSN P * L HI Q H NH+ L DHQ QN +T
Sbjct: 509 HLQILKRVHTA*LPDANLSNGPI*AALTVHIHQEEHRNHNLLQ*KDHQQFGQNLSLHDTY 330
Query: 89 NNFVSFPTLIKTSNSKSTVL 30
N+ P + T K L
Sbjct: 329 NSL*MTPPSV*TLQPKMPCL 270
Score = 42.3 bits (86), Expect(2) = 2e-013
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3 / +2
Query: 3 GESLPHRPAQDSAFAVARFYQRGEAY 80
G +PHRPA+D AF+VARF Q+G ++
Sbjct: 242 GGPVPHRPAEDMAFSVARFIQKGGSF 319
Score = 35.0 bits (70), Expect(3) = 2e-038
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2 / +2
Query: 371 CSAFLANIDEHKYASVWIFGKSYSLPPWSVSIL 469
C+AFLAN + +A V Y+ WS+SIL
Sbjct: 572 CAAFLANYHQRSFAKVSFRNMHYNPASWSISIL 670
Score = 33.1 bits (66), Expect = 1.5
Identities = 24/59 (40%), Positives = 30/59 (50%)
Frame = +3 / +3
Query: 42 FAVARFYQRGEAYKIITCILVEPILSGQLVVHFR*LAMIMMHQLTNMVS*DNLSGGI*K 218
F + Y+RG I CI+ IL+ LVV MI M L NM * +L+G I*K
Sbjct: 282 FRLQGSYRRGGHS*TIICIMEGQILAELLVVLSLQQVMITMLLLMNMDC*GSLNGAI*K 458
Score = 23.5 bits (45), Expect(3) = 2e-038
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2 / +2
Query: 263 VDGSPHYVKLGPMQEAHVYS 322
V G + LG QEAHV++
Sbjct: 497 VSGDATVIPLGNYQEAHVFN 556
>gb|CK107056.1|CK107056 UB45DPA02.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB45DPA02 5', mRNA sequence
Length = 594
Score = 134 bits (288), Expect = 4e-031
Identities = 52/78 (66%), Positives = 59/78 (75%)
Frame = +2 / +1
Query: 41 FCCCSFLSTWGSLQNYYMYFGGTNFERTAGGPLQITSYDYDAPIDEYGILRQPKWGHLKD 220
F F+ GSL NYYMY GGTNF RT+GGP TSYDYDAPIDEYG++RQPK+GHLK+
Sbjct: 232 FAVARFIQKGGSLVNYYMYHGGTNFGRTSGGPFITTSYDYDAPIDEYGLIRQPKYGHLKE 411
Query: 221 LHAAIKLCESALTAVDGS 274
LH AIKLCE A A D +
Sbjct: 412 LHKAIKLCEKAFLAADST 465
Score = 90.0 bits (190), Expect = 1e-017
Identities = 44/66 (66%), Positives = 48/66 (72%)
Frame = -1 / -2
Query: 267 STAVRADSQSLIAACRSFKCPHLGCLKIPYSSIGAS*S*LVI*SGPPAVRSKLVPPKYM* 88
S A +A S +LIA C SFK P+LGCL PYSSIGAS*S*LV+ GPP V KLVPP YM*
Sbjct: 458 SAARKAFSHNLIALCSSFKWPYLGCLINPYSSIGAS*S*LVVMKGPPEVLPKLVPPWYM* 279
Query: 87 *FCKLP 70
* K P
Sbjct: 278 *LTKEP 261
Score = 42.3 bits (86), Expect = 0.003
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = -3 / -1
Query: 268 IYCSKS*FTKFNSCM*VFQMPPLRLS*DTIFVNWCIIIIASYLKWTTSCPLKIGSTKIHV 89
I +S FT FNS M*+ + LRL +IF++ II+IA + + K+GS+ +HV
Sbjct: 459 ISSEESFFT*FNSLM*LL*VAILRLPDQSIFIDRGIIVIACSDERASRSSSKVGSSMVHV 280
Query: 88 II 83
++
Sbjct: 279 VV 274
Score = 33.6 bits (67), Expect(2) = 4e-005
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3 / +1
Query: 21 RPAQDSAFAVARFYQRG 71
RPA+D AFAVARF Q+G
Sbjct: 211 RPAEDLAFAVARFIQKG 261
Score = 32.7 bits (65), Expect(2) = 4e-005
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = +1 / +3
Query: 85 LLHVFWWNQF*ADSWWSTSDN*L*L*CTN*RIWYLKTT*VGAFERPTCSY*TL*IS 252
LLHV W NQ + W L*L*C + IW + T*V + T Y* +* S
Sbjct: 276 LLHVPWRNQLWKNFWRPFHHYKL*L*CPDR*IWIDQAT*VWPLKGAT*GY*IM*KS 443
>gb|CX180811.1|CX180811 A05_45-68_01.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 606
Score = 76.2 bits (160), Expect(2) = 6e-024
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = +2 / +1
Query: 164 APIDEYGILRQPKWGHLKDLHAAIKLCESALTAVD 268
AP+DEYG++RQPKWGHLKDLH +IKLCE AL A D
Sbjct: 1 APLDEYGLIRQPKWGHLKDLHKSIKLCEEALVATD 105
Score = 55.6 bits (115), Expect(2) = 6e-024
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2 / +1
Query: 428 GKSYSLPPWSVSILPDCETVAFNTARVGTQT 520
G SY+LP WSVSILPDC+ VA NTA++ + T
Sbjct: 223 GNSYNLPGWSVSILPDCKNVALNTAKINSMT 315
Score = 48.7 bits (100), Expect(2) = 9e-010
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -1 / -2
Query: 267 STAVRADSQSLIAACRSFKCPHLGCLKIPYSSIG 166
S A A SQS + C+SF+ PHLGCL PYSS G
Sbjct: 104 SVATNASSQSFMDLCKSFR*PHLGCLISPYSSRG 3
Score = 35.0 bits (70), Expect(2) = 9e-010
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -1 / -2
Query: 501 AVLKATVSQSGSMLTDHGGRL*DFP 427
AVL+AT QSG MLTD G+L + P
Sbjct: 296 AVLRATFLQSGKMLTDQPGKLYELP 222
Score = 33.6 bits (67), Expect = 1.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1 / +3
Query: 427 WKIL*STTMVCEHTTRL*NCGF*YSQ 504
W+ +* +VCEH TRL C *YS+
Sbjct: 222 WQFV*LAWLVCEHLTRLQECSS*YSK 299
Score = 31.8 bits (63), Expect(2) = 0.003
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -3 / -1
Query: 520 CLCTNPGCIKSHSFTVW*YAHRPWW*TIRFS 428
C N CIKS+ VW* AHRP IR +
Sbjct: 315 CHRVNLCCIKSYILAVW*DAHRPTRQVIRIA 223
Score = 29.5 bits (58), Expect(2) = 0.003
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 247 FTKFNSCM*VFQMPPLRLS*DTIFV 173
FTK M + QM PLRLS ++F+
Sbjct: 84 FTKLYGLMQILQMTPLRLSYKSVFI 10
>gb|CX181405.1|CX181405 G04_45-84_14.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 596
Score = 80.3 bits (169), Expect = 9e-015
Identities = 31/49 (63%), Positives = 34/49 (69%)
Frame = +2 / +1
Query: 41 FCCCSFLSTWGSLQNYYMYFGGTNFERTAGGPLQITSYDYDAPIDEYGI 187
F F+ GS NYYMY GGTNF RTAGGP TSYDY AP+DEYG+
Sbjct: 448 FSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYHAPLDEYGL 594
Score = 52.4 bits (108), Expect = 2e-006
Identities = 27/38 (71%), Positives = 27/38 (71%)
Frame = -1 / -1
Query: 183 PYSSIGAS*S*LVI*SGPPAVRSKLVPPKYM**FCKLP 70
PYSS GA *S*LV GPPAVR K VPP YM**F P
Sbjct: 590 PYSSRGAW*S*LVAMKGPPAVRPKFVPP*YM**FMNDP 477
Score = 43.2 bits (88), Expect(2) = 1e-010
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1 / +3
Query: 70 GKLTKLLHVFWWNQF*ADSWWSTSDN*L*L*CTN*RIW 183
G + KLLHV W ++F + WWS N L*L C++* IW
Sbjct: 477 GVIHKLLHVSWRDKFWPNCWWSFHCNKL*LPCSS**IW 590
Score = 42.3 bits (86), Expect(2) = 1e-010
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3 / +1
Query: 3 GESLPHRPAQDSAFAVARFYQRGEAY 80
G +PHRPA+D AF+VARF Q+G ++
Sbjct: 409 GGPVPHRPAEDMAFSVARFIQKGGSF 486
Score = 35.9 bits (72), Expect = 0.22
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = -2 / -2
Query: 182 HIRQLVHHNHS*LSEVDHQLSAQNWFHQNTCNNFVSFPTLIKTSNSKSTVL 30
HI Q H NH+ L DHQ QN +TCN+ P + T K L
Sbjct: 589 HIHQEEHGNHNLLQ*KDHQQFGQNLSLHDTCNSL*MTPPSV*TLQPKMPCL 437
>gb|CX186779.1|CX186779 A06_45-26_02.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 528
Score = 71.2 bits (149), Expect = 5e-012
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = +2 / +1
Query: 41 FCCCSFLSTWGSLQNYYMYFGGTNFERTAGGPLQITSYDYDAPID 175
F F+ GS NYYMY GGT F RTAGGP T+YDYDAP+D
Sbjct: 394 FSVARFIQNGGSYINYYMYHGGTTFRRTAGGPFIATNYDYDAPLD 528
Score = 41.4 bits (84), Expect(2) = 3e-004
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3 / +1
Query: 3 GESLPHRPAQDSAFAVARFYQRGEAY 80
G ++PH PA+D AF+VARF Q G +Y
Sbjct: 355 GGAVPHSPAEDMAFSVARFIQNGGSY 432
Score = 39.6 bits (80), Expect = 0.017
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -1 / -2
Query: 174 SIGAS*S*LVI*SGPPAVRSKLVPPKYM** 85
S GAS*S*LV GPPAV K+VPP Y+**
Sbjct: 527 SRGAS*S*LVAMKGPPAVLRKVVPPWYI** 438
Score = 22.1 bits (42), Expect(2) = 3e-004
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +3
Query: 85 LLHVFWWNQF*ADSWWSTSDN*L*L*CTN* 174
LL+V W N + W S +*L L*C +*
Sbjct: 438 LLYVPWRNYLPKNRWRSLHCH*LRL*CPS* 527
>gb|CN524398.1|CN524398 GQ015M14.T3_B10 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M14_B10 5', mRNA sequence
Length = 768
Score = 65.2 bits (136), Expect = 3e-010
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +2 / +2
Query: 437 YSLPPWSVSILPDCETVAFNTARVGTQTSXFNVESGSPSYS 559
Y LPPWSVSILPDC+T +NTAR+G+Q+S + S S+S
Sbjct: 53 YELPPWSVSILPDCKTAVYNTARLGSQSSQMKMVPASSSFS 175
Score = 34.1 bits (68), Expect = 0.79
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1 / -1
Query: 510 PTLAVLKATVSQSGSMLTDHGG 445
P+LAVL V QSG MLTD GG
Sbjct: 126 PSLAVL*TAVLQSGRMLTDQGG 61
>gb|BU878208.1|BU878208 V044D06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 555
Score = 63.4 bits (132), Expect = 1e-009
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +2 / +2
Query: 437 YSLPPWSVSILPDCETVAFNTARVGTQTS 523
YSLPPWS+SILPDC+ V FNTA+VG QTS
Sbjct: 29 YSLPPWSISILPDCKNVVFNTAQVGVQTS 115
Score = 41.4 bits (84), Expect = 0.005
Identities = 19/28 (67%), Positives = 19/28 (67%)
Frame = -1 / -1
Query: 522 DVCVPTLAVLKATVSQSGSMLTDHGGRL 439
DV PT AVLK T QSG ML D GGRL
Sbjct: 114 DV*TPTWAVLKTTFLQSGRMLIDQGGRL 31
>gb|DN502013.1|DN502013 V044D06.5pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V044D06 5', mRNA sequence
Length = 697
Score = 63.4 bits (132), Expect = 1e-009
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +2 / +1
Query: 437 YSLPPWSVSILPDCETVAFNTARVGTQTS 523
YSLPPWS+SILPDC+ V FNTA+VG QTS
Sbjct: 25 YSLPPWSISILPDCKNVVFNTAQVGVQTS 111
Score = 41.4 bits (84), Expect = 0.005
Identities = 19/28 (67%), Positives = 19/28 (67%)
Frame = -1 / -3
Query: 522 DVCVPTLAVLKATVSQSGSMLTDHGGRL 439
DV PT AVLK T QSG ML D GGRL
Sbjct: 110 DV*TPTWAVLKTTFLQSGRMLIDQGGRL 27
>gb|DN494593.1|DN494593 M111F05.5pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M111F05 5', mRNA sequence
Length = 632
Score = 57.0 bits (118), Expect = 1e-007
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +2 / +3
Query: 41 FCCCSFLSTWGSLQNYYMYFGGTNFERTAGGPLQITSY 154
F F+ GS NYYMY GGTNF RTAGGP TSY
Sbjct: 519 FSVARFIQNGGSYINYYMYHGGTNFGRTAGGPFIATSY 632
Score = 44.1 bits (90), Expect = 7e-004
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3 / +3
Query: 3 GESLPHRPAQDSAFAVARFYQRGEAY 80
G ++PHRPA+D AF+VARF Q G +Y
Sbjct: 480 GGAVPHRPAEDMAFSVARFIQNGGSY 557
Score = 32.2 bits (64), Expect = 2.8
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = -1 / -2
Query: 153 *LVI*SGPPAVRSKLVPPKYM**FCKLP 70
*LV GPPAV KLVPP Y+** P
Sbjct: 631 *LVAMKGPPAVLPKLVPPWYI**LMYEP 548
>gb|DN503025.1|DN503025 X052A07.5pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X052A07 5', mRNA sequence
Length = 587
Score = 55.6 bits (115), Expect = 3e-007
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2 / +2
Query: 428 GKSYSLPPWSVSILPDCETVAFNTARVGTQT 520
G SY+LP WSVSILPDC+ VA NTA++ + T
Sbjct: 128 GNSYNLPGWSVSILPDCKNVALNTAKINSMT 220
Score = 35.0 bits (70), Expect = 0.42
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -1 / -3
Query: 501 AVLKATVSQSGSMLTDHGGRL*DFP 427
AVL+AT QSG MLTD G+L + P
Sbjct: 201 AVLRATFLQSGKMLTDQPGKLYELP 127
Score = 33.6 bits (67), Expect = 1.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1 / +1
Query: 427 WKIL*STTMVCEHTTRL*NCGF*YSQ 504
W+ +* +VCEH TRL C *YS+
Sbjct: 127 WQFV*LAWLVCEHLTRLQECSS*YSK 204
Score = 31.8 bits (63), Expect = 3.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -3 / -2
Query: 520 CLCTNPGCIKSHSFTVW*YAHRPWW*TIRFS 428
C N CIKS+ VW* AHRP IR +
Sbjct: 220 CHRVNLCCIKSYILAVW*DAHRPTRQVIRIA 128
>gb|DV466288.1|DV466288 MTUNUL1.P49.F09 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 865
Score = 48.3 bits (99), Expect = 4e-005
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +2 / +3
Query: 434 SYSLPPWSVSILPDCETVAFNTARVGTQ 517
+Y LP WSVSIL DC+ V FNTA+V TQ
Sbjct: 30 TYFLPAWSVSILADCKNVIFNTAKVVTQ 113
Score = 45.1 bits (92), Expect = 4e-004
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -1 / -1
Query: 519 VCVPTLAVLKATVSQSGSMLTDHGGR 442
+CV TLAVLK T QS SMLTDH GR
Sbjct: 115 LCVTTLAVLKMTFLQSASMLTDHAGR 38
Score = 34.1 bits (68), Expect = 0.79
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1 / +2
Query: 442 STTMVCEHTTRL*NCGF*YSQGWYTNIXFQCRIW 543
S+ MVCEHT RL C F + G Y +C ++
Sbjct: 38 SSCMVCEHTCRLQECHFQHG*GCYAKTYRRCFVF 139
>gb|BI071943.1|BI071943 C066P45U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 317
Score = 40.5 bits (82), Expect(2) = 2e-004
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3 / +1
Query: 3 GESLPHRPAQDSAFAVARFYQRG 71
G ++P+RP +D AFAVARFYQ G
Sbjct: 199 GGAVPYRPVEDLAFAVARFYQLG 267
Score = 23.1 bits (44), Expect(2) = 2e-004
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1 / +1
Query: 70 GKLTKLLHVFWW 105
G KLL+V WW
Sbjct: 268 GDFXKLLYVSWW 303
>gb|CX185985.1|CX185985 C05_45-1_05.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 609
Score = 45.5 bits (93), Expect = 3e-004
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3 / +1
Query: 3 GESLPHRPAQDSAFAVARFYQRGEAY 80
G ++PHRPA+D AFAVARF Q G +Y
Sbjct: 511 GGAVPHRPAEDMAFAVARFIQNGGSY 588
>gb|AJ771539.1|AJ771539 AJ771539 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600002D12F1, mRNA sequence
Length = 247
Score = 44.1 bits (90), Expect = 7e-004
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3 / +1
Query: 3 GESLPHRPAQDSAFAVARFYQRGEAY 80
G ++PHRPA+D AF+VARF Q G +Y
Sbjct: 154 GGAVPHRPAEDMAFSVARFIQNGGSY 231
>gb|AJ780410.1|AJ780410 AJ780410 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900007E10F1, mRNA sequence
Length = 220
Score = 40.5 bits (82), Expect = 0.009
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2 / +1
Query: 455 SVSILPDCETVAFNTARVGTQTS 523
S+SILPDC+ +NTARVG Q++
Sbjct: 1 SISILPDCKNTVYNTARVGAQSA 69
>gb|CV269368.1|CV269368 WS0208.B21_B06 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0208_B06 3', mRNA sequence
Length = 721
Score = 34.1 bits (68), Expect = 0.79
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +2 / -3
Query: 38 CFCCCSFLSTWGSLQNYYMYF 100
C+CCC FL+ G +++ ++Y+
Sbjct: 68 CYCCCCFLARVGMMEHTFLYY 6
>gb|DT508139.1|DT508139 WS02420.BR_C18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_C18 5', mRNA sequence
Length = 871
Score = 34.1 bits (68), Expect = 0.79
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3 / +1
Query: 3 GESLPHRPAQDSAFAVARF 59
G PHRPA+D AF+VARF
Sbjct: 814 GAPNPHRPAEDVAFSVARF 870
>gb|CK097719.1|CK097719 UB59CPE09.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB59CPE09 3', mRNA sequence
Length = 847
Score = 28.1 bits (55), Expect(2) = 0.92
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 410 ASVWIFGKSYSLPPWSVSILPDCE 481
A++W FG SYS P V++ CE
Sbjct: 475 ATMWPFGMSYSFPSRVVTLKSLCE 546
Score = 23.1 bits (44), Expect(2) = 0.92
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3 / +2
Query: 519 HRFSMSNLGPPAIQVGIN 572
H FS + PP Q+GI+
Sbjct: 650 HAFSSRSSAPPTQQIGIH 703
>gb|CV244970.1|CV244970 WS0256.B21_C05 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0256_C05 3', mRNA sequence
Length = 979
Score = 28.1 bits (55), Expect(2) = 1.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2 / +3
Query: 410 ASVWIFGKSYSLPPWSVSILPDCE 481
A++W FG SYS P V++ CE
Sbjct: 531 ATMWPFGMSYSFPSRVVTLKSLCE 602
Score = 22.1 bits (42), Expect(2) = 1.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3 / +1
Query: 525 FSMSNLGPPAIQVGIN 572
FS S+ PP Q+GI+
Sbjct: 712 FSSSSSAPPTQQIGIH 759
>gb|DT488357.1|DT488357 WS02536.B21_D10 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02536_D10 3', mRNA sequence
Length = 946
Score = 28.1 bits (55), Expect(2) = 1.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2 / +3
Query: 410 ASVWIFGKSYSLPPWSVSILPDCE 481
A++W FG SYS P V++ CE
Sbjct: 528 ATMWPFGMSYSFPSRVVTLKSLCE 599
Score = 22.1 bits (42), Expect(2) = 1.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3 / +1
Query: 525 FSMSNLGPPAIQVGIN 572
FS S+ PP Q+GI+
Sbjct: 709 FSSSSSAPPTQQIGIH 756
>gb|DT516049.1|DT516049 WS02430.B21_E03 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_E03 3', mRNA sequence
Length = 918
Score = 28.1 bits (55), Expect(2) = 1.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2 / +3
Query: 410 ASVWIFGKSYSLPPWSVSILPDCE 481
A++W FG SYS P V++ CE
Sbjct: 528 ATMWPFGMSYSFPSRVVTLKSLCE 599
Score = 22.1 bits (42), Expect(2) = 1.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3 / +1
Query: 525 FSMSNLGPPAIQVGIN 572
FS S+ PP Q+GI+
Sbjct: 709 FSSSSSAPPTQQIGIH 756
>gb|DT485206.1|DT485206 WS02527.B21_J07 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02527_J07 3', mRNA sequence
Length = 910
Score = 28.1 bits (55), Expect(2) = 1.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2 / +2
Query: 410 ASVWIFGKSYSLPPWSVSILPDCE 481
A++W FG SYS P V++ CE
Sbjct: 554 ATMWPFGMSYSFPSRVVTLKSLCE 625
Score = 22.1 bits (42), Expect(2) = 1.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3 / +3
Query: 525 FSMSNLGPPAIQVGIN 572
FS S+ PP Q+GI+
Sbjct: 735 FSSSSSAPPTQQIGIH 782
>gb|CV226286.1|CV226286 WS0163.B21_N06 PT-DX-A-7 Populus trichocarpa cDNA clone WS0163_N06
3', mRNA sequence
Length = 423
Score = 32.7 bits (65), Expect = 2.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / +3
Query: 173 QLVHHNHS*LSEVDHQLSAQNW 108
Q VHH * + VDHQ SA NW
Sbjct: 357 QNVHHTVD*AAHVDHQPSASNW 422
>gb|CV236602.1|CV236602 WS01224.B21.1_L05 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01224_L05 3', mRNA sequence
Length = 567
Score = 32.7 bits (65), Expect = 2.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2 / -2
Query: 50 CSFLSTWGSLQNYYMYFGGTNFERTAGGPLQITSYDYDAPIDEY 181
C F S GS + Y+Y G +F G L +Y +P D Y
Sbjct: 359 CKFFSFPGSTRRDYVYGEGAHFTEVKAGALGKRAYKRQSPKDVY 228
>gb|CN523993.1|CN523993 GQ015M10.T3_H04 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M10_H04 5', mRNA sequence
Length = 843
Score = 31.8 bits (63), Expect = 3.9
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / -3
Query: 35 QCFCCCSFLSTWGS 76
QC+CCCS++ T+ S
Sbjct: 523 QCYCCCSYICTYAS 482
>gb|BU832008.1|BU832008 T028D04 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 451
Score = 30.9 bits (61), Expect = 7.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2 / +2
Query: 38 CFCCCSFLSTWGSLQNY 88
CF CC LSTWG +Y
Sbjct: 257 CFLCCL*LSTWGLTSHY 307
>gb|DN499130.1|DN499130 T028D04.5pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T028D04 5', mRNA sequence
Length = 720
Score = 30.9 bits (61), Expect = 7.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2 / +3
Query: 38 CFCCCSFLSTWGSLQNY 88
CF CC LSTWG +Y
Sbjct: 294 CFLCCL*LSTWGLTSHY 344
>gb|DT486324.1|DT486324 WS02530.B21_K14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_K14 3', mRNA sequence
Length = 341
Score = 30.9 bits (61), Expect = 7.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3 / +3
Query: 324 VKMSTQMEAFQEIHSFAQLFLPTLMNINML 413
VK + + EAF E+HSF LP L + L
Sbjct: 126 VKKNKEKEAFNEVHSFN*FILPCLDKVGAL 215
>gb|AJ772460.1|AJ772460 AJ772460 Populus euphratica shoot in vitro plantlet Israel
Populus euphratica cDNA clone P0001700006G12F1, mRNA
sequence
Length = 208
Score = 26.3 bits (51), Expect(2) = 7.6
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2 / +2
Query: 23 ACSRQCFCCCSFLS 64
+C+R FCCC + +
Sbjct: 41 SCARSIFCCCCYFT 82
Score = 20.3 bits (38), Expect(2) = 7.6
Identities = 7/25 (28%), Positives = 12/25 (48%)
Frame = +2 / +2
Query: 44 CCCSFLSTWGSLQNYYMYFGGTNFE 118
CCC F + +L + + + FE
Sbjct: 65 CCCYFTYIFTALSSAWCFSLSEQFE 139
Database: Populus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:31 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 332,202,776
Number of Sequences: 369679
Number of extensions: 5090835
Number of successful extensions: 67502
Number of sequences better than 10.0: 39
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 7048693296
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)