TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCG22g05.yg.2.1
(681 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE657080.1|BE657080 NXCI_042_B12_F NXCI (Nsf Xylem Compr... 118 1e-047
gb|DR079189.1|DR079189 RTFEPL1_9_E02.g1_A029 Roots plus add... 171 4e-047
gb|DR017828.1|DR017828 STRS1_18_F03.g1_A034 Shoot tip pitch... 100 8e-046
gb|DR048385.1|DR048385 RTBOR1_8_B10.g2_A029 Roots plus adde... 154 1e-043
gb|DT637449.1|DT637449 EST1152380 Normalized pine embryo li... 87 6e-043
gb|DR692320.1|DR692320 EST1082408 Normalized pine embryo li... 87 6e-043
gb|DT635766.1|DT635766 EST1150697 Normalized pine embryo li... 156 9e-043
gb|DT635729.1|DT635729 EST1150660 Normalized pine embryo li... 156 9e-043
gb|DR689835.1|DR689835 EST1079921 Normalized pine embryo li... 156 8e-042
gb|BE582471.1|BE582471 NXCI_033_G11_F NXCI (Nsf Xylem Compr... 110 1e-041
gb|DR683361.1|DR683361 EST1073437 Normalized pine embryo li... 101 3e-040
gb|CO158440.1|CO158440 FLD1_6_H11.g1_A029 Root flooded Pinu... 91 3e-039
gb|CO201810.1|CO201810 RTCNT2_8_G01.b1_A029 Root control 2 ... 91 3e-039
gb|CF478389.1|CF478389 RTWW3_18_H02.g1_A022 Well-watered lo... 89 9e-039
gb|DT631649.1|DT631649 EST1146580 Normalized pine embryo li... 96 1e-038
gb|CF389801.1|CF389801 RTDR2_5_E12.g1_A021 Loblolly pine ro... 93 2e-038
gb|CF476188.1|CF476188 RTWW2_21_F05.g1_A021 Well-watered lo... 98 3e-037
gb|DT627163.1|DT627163 EST1160239 Sequencing ESTs from lobl... 86 3e-037
gb|DN460720.1|DN460720 EST956519 Sequencing ESTs from loblo... 86 3e-037
gb|DR387131.1|DR387131 RTHG1_19_D12.g1_A029 Roots plus adde... 137 8e-036
gb|DR690041.1|DR690041 EST1080127 Normalized pine embryo li... 150 1e-035
gb|DR023122.1|DR023122 STRS1_55_D03.g1_A034 Shoot tip pitch... 133 3e-035
gb|CF670534.1|CF670534 RTCNT1_50_H04.g1_A029 Root control P... 95 7e-035
gb|DR694986.1|DR694986 EST1085079 Normalized pine embryo li... 147 9e-035
gb|DT639178.1|DT639178 EST1154109 Normalized pine embryo li... 147 9e-035
gb|CF477737.1|CF477737 RTWW3_9_A05.g1_A022 Well-watered lob... 79 1e-034
gb|DT633576.1|DT633576 EST1148507 Normalized pine embryo li... 129 6e-034
gb|DR686689.1|DR686689 EST1076767 Normalized pine embryo li... 129 6e-034
gb|CO198783.1|CO198783 GEO1_16_B06.g1_A029 Root gravitropis... 75 9e-034
dbj|BD267395.1| Compositions isolated from plant cells and ... 128 1e-033
gb|CX647345.1|CX647345 COLD1_15_A11.g1_A029 Root cold Pinus... 85 1e-033
gb|CO176663.1|CO176663 NDL1_63_A06.g1_A029 Needles control ... 81 1e-033
gb|CO363690.1|CO363690 RTK1_11_F05.b1_A029 Roots minus pota... 79 4e-033
gb|DR167714.1|DR167714 RTPHOS1_20_C10.g1_A029 Roots minus p... 71 9e-033
gb|CX651917.1|CX651917 COLD1_55_E03.g1_A029 Root cold Pinus... 71 1e-032
gb|DR089413.1|DR089413 RTAL1_8_B10.g1_A029 Roots plus added... 96 2e-032
gb|CF670687.1|CF670687 RTCNT1_51_H04.g1_A029 Root control P... 96 2e-032
dbj|BD267201.1| Compositions isolated from plant cells and ... 75 2e-032
gb|BQ701720.1|BQ701720 NXSI_118_G12_F NXSI (Nsf Xylem Side ... 129 2e-032
gb|CO361752.1|CO361752 NDL2_6_G07.g1_A029 Needles control 2... 75 2e-032
gb|DR177846.1|DR177846 RTMNUT1_7_F04.g1_A029 Roots minus mi... 99 5e-032
dbj|BD267163.1| Compositions isolated from plant cells and ... 133 1e-031
gb|DR693676.1|DR693676 EST1083765 Normalized pine embryo li... 116 1e-031
gb|DT638410.1|DT638410 EST1153341 Normalized pine embryo li... 80 2e-031
gb|CX653278.1|CX653278 COLD1_64_C07.g1_A029 Root cold Pinus... 80 2e-031
gb|DR693856.1|DR693856 EST1083946 Normalized pine embryo li... 80 2e-031
dbj|BD267183.1| Compositions isolated from plant cells and ... 81 2e-031
gb|CF672191.1|CF672191 RTCNT1_62_A10.b1_A029 Root control P... 95 4e-031
gb|CF670461.1|CF670461 RTCNT1_50_H04.b1_A029 Root control P... 95 4e-031
gb|BE762255.1|BE762255 NXCI_067_C04_F NXCI (Nsf Xylem Compr... 82 5e-031
gb|DT635841.1|DT635841 EST1150772 Normalized pine embryo li... 131 6e-031
gb|DR055258.1|DR055258 RTCA1_22_C03.g2_A029 Roots minus cal... 134 6e-031
gb|DT633951.1|DT633951 EST1148882 Normalized pine embryo li... 134 6e-031
gb|DR682209.1|DR682209 EST1072284 Normalized pine embryo li... 74 1e-030
gb|DT630896.1|DT630896 EST1145827 Normalized pine embryo li... 74 1e-030
gb|CO364963.1|CO364963 RTK1_22_G07.g1_A029 Roots minus pota... 111 2e-030
gb|DT635388.1|DT635388 EST1150319 Normalized pine embryo li... 80 4e-030
gb|DR689529.1|DR689529 EST1079615 Normalized pine embryo li... 80 4e-030
dbj|BD267181.1| Compositions isolated from plant cells and ... 71 5e-030
gb|CF670225.1|CF670225 RTCNT1_48_G11.g1_A029 Root control P... 71 5e-030
gb|AI920205.1|AI920205 1735 Pine Lambda Zap Xylem library P... 78 6e-030
gb|BX253174.1|BX253174 BX253174 Pinus pinaster differenciat... 84 9e-030
gb|DR120743.1|DR120743 RTMG1_31_D06.g1_A029 Roots minus mag... 130 1e-029
gb|DR120894.1|DR120894 RTMG1_32_D06.g1_A029 Roots minus mag... 130 1e-029
gb|CO172176.1|CO172176 NDL1_27_H03.g1_A029 Needles control ... 75 1e-029
gb|DR093624.1|DR093624 STRR1_9_A02.g1_A033 Stem Response Re... 84 2e-029
gb|DT634654.1|DT634654 EST1149585 Normalized pine embryo li... 76 2e-029
gb|CR394436.1|CR394436 CR394436 RN Pinus pinaster cDNA clon... 107 4e-029
gb|CO163254.1|CO163254 FLD1_40_A05.g1_A029 Root flooded Pin... 72 4e-029
gb|DR052951.1|DR052951 RTCA1_7_H11.g1_A029 Roots minus calc... 71 8e-029
gb|DR688648.1|DR688648 EST1078733 Normalized pine embryo li... 76 8e-029
gb|BX252982.1|BX252982 BX252982 Pinus pinaster differenciat... 84 8e-029
gb|AW290044.1|AW290044 NXNV009D10F Nsf Xylem Normal wood Ve... 74 9e-029
gb|CD026667.1|CD026667 NXNV009D10 Nsf Xylem Normal wood Ver... 74 9e-029
gb|CO172846.1|CO172846 NDL1_32_F12.b1_A029 Needles control ... 67 1e-028
gb|DR051100.1|DR051100 RTBOR1_27_E01.g1_A029 Roots plus add... 71 2e-028
gb|CF396623.1|CF396623 RTDS2_23_G04.b1_A021 Drought-stresse... 113 2e-028
gb|CF398449.1|CF398449 RTDS3_12_E10.g1_A022 Drought-stresse... 116 2e-028
gb|DR694632.1|DR694632 EST1084724 Normalized pine embryo li... 71 3e-028
gb|DT638526.1|DT638526 EST1153457 Normalized pine embryo li... 71 3e-028
gb|DT633242.1|DT633242 EST1148173 Normalized pine embryo li... 86 3e-028
gb|DR692897.1|DR692897 EST1082985 Normalized pine embryo li... 125 4e-028
gb|CF471819.1|CF471819 RTDS1_6_A09.g1_A015 Drought-stressed... 72 6e-028
gb|DT634229.1|DT634229 EST1149160 Normalized pine embryo li... 84 7e-028
gb|DR687522.1|DR687522 EST1077604 Normalized pine embryo li... 84 7e-028
gb|CX651434.1|CX651434 COLD1_52_H06.b1_A029 Root cold Pinus... 84 7e-028
gb|DR099217.1|DR099217 STRR1_54_A11.b1_A033 Stem Response R... 97 1e-027
gb|CO164652.1|CO164652 FLD1_49_A03.g1_A029 Root flooded Pin... 117 1e-027
gb|DR683837.1|DR683837 EST1073913 Normalized pine embryo li... 117 1e-027
gb|DR052941.1|DR052941 RTCA1_7_G11.g1_A029 Roots minus calc... 81 1e-027
gb|CO366400.1|CO366400 RTK1_27_D07.g1_A029 Roots minus pota... 70 2e-027
gb|DT632517.1|DT632517 EST1147448 Normalized pine embryo li... 101 3e-027
gb|DR090458.1|DR090458 RTAL1_15_E03.b1_A029 Roots plus adde... 95 3e-027
gb|DT634540.1|DT634540 EST1149471 Normalized pine embryo li... 84 3e-027
gb|DR687984.1|DR687984 EST1078067 Normalized pine embryo li... 84 3e-027
gb|DR013519.1|DR013519 HEAT1_19_G02.g1_A029 Root at 37 C fo... 69 5e-027
gb|CV034109.1|CV034109 RTNACL1_38_E12.g1_A029 Roots plus ad... 81 5e-027
gb|DN464990.1|DN464990 EST960789 Sequencing ESTs from loblo... 103 5e-027
gb|DT627470.1|DT627470 EST1160546 Sequencing ESTs from lobl... 103 5e-027
gb|CV033417.1|CV033417 RTNACL1_34_A01.g1_A029 Roots plus ad... 85 1e-026
gb|DR078856.1|DR078856 RTFEPL1_7_F10.b1_A029 Roots plus add... 79 1e-026
gb|DR689236.1|DR689236 EST1079322 Normalized pine embryo li... 79 1e-026
gb|DR686550.1|DR686550 EST1076628 Normalized pine embryo li... 81 1e-026
gb|BG318348.1|BG318348 NXPV_012_E10_F NXPV (Nsf Xylem Plani... 103 1e-026
dbj|BD267252.1| Compositions isolated from plant cells and ... 79 1e-026
gb|CF474781.1|CF474781 RTWW2_7_H01.g1_A021 Well-watered lob... 112 2e-026
gb|CF479345.1|CF479345 RTWW3_23_H01.g1_A022 Well-watered lo... 74 3e-026
gb|BX251830.1|BX251830 BX251830 Pinus pinaster differenciat... 68 4e-026
dbj|BD267191.1| Compositions isolated from plant cells and ... 87 5e-026
gb|DR022392.1|DR022392 STRS1_50_F09.g1_A034 Shoot tip pitch... 72 5e-026
gb|DR178599.1|DR178599 RTMNUT1_12_F08.g1_A029 Roots minus m... 69 6e-026
gb|BQ290610.1|BQ290610 NXRV047_D12_F NXRV (Nsf Xylem Root w... 71 7e-026
gb|CF390303.1|CF390303 RTDR2_18_A12.g1_A021 Loblolly pine r... 80 7e-026
gb|CF396977.1|CF396977 RTDS2_25_A05.g1_A021 Drought-stresse... 84 7e-026
gb|BM367892.1|BM367892 NXLV_059_E02_F NXLV (Nsf Xylem Late ... 117 8e-026
dbj|BD267209.1| Compositions isolated from plant cells and ... 66 1e-025
gb|DR078348.1|DR078348 RTFEPL1_3_C02.g1_A029 Roots plus add... 52 1e-025
gb|CF474704.1|CF474704 RTWW2_7_A12.b1_A021 Well-watered lob... 67 2e-025
gb|CV032536.1|CV032536 RTNACL1_8_G04.g1_A029 Roots plus add... 70 2e-025
gb|DR015252.1|DR015252 STRS1_2_H08.b1_A034 Shoot tip pitch ... 65 2e-025
gb|BX253405.1|BX253405 BX253405 Pinus pinaster differenciat... 77 3e-025
gb|BQ655258.1|BQ655258 NXRV092_A07_F NXRV (Nsf Xylem Root w... 81 3e-025
gb|CV035770.1|CV035770 RTNACL1_42_G08.b1_A029 Roots plus ad... 67 3e-025
gb|CF471161.1|CF471161 RTDS1_16_H03.g1_A015 Drought-stresse... 79 3e-025
gb|CF470944.1|CF470944 RTDS1_15_H03.g1_A015 Drought-stresse... 79 3e-025
gb|DR014557.1|DR014557 HEAT1_50_E09.b1_A029 Root at 37 C fo... 72 4e-025
gb|CV035245.1|CV035245 RTNACL1_14_F04.g1_A029 Roots plus ad... 83 4e-025
gb|DR097452.1|DR097452 STRR1_34_F01.g3_A033 Stem Response R... 83 4e-025
gb|DT635175.1|DT635175 EST1150106 Normalized pine embryo li... 74 4e-025
gb|DR117868.1|DR117868 RTMG1_9_E09.g1_A029 Roots minus magn... 83 4e-025
gb|DR179373.1|DR179373 RTMNUT1_21_E10.g2_A029 Roots minus m... 83 4e-025
gb|CF388596.1|CF388596 RTDR2_4_G03.g1_A021 Loblolly pine ro... 83 4e-025
gb|CF479736.1|CF479736 RTWW3_11_B10.g1_A022 Well-watered lo... 83 4e-025
gb|CO196803.1|CO196803 GEO1_1_D11.g1_A029 Root gravitropism... 83 4e-025
gb|DR684696.1|DR684696 EST1074773 Normalized pine embryo li... 83 4e-025
gb|DT626859.1|DT626859 EST1159935 Sequencing ESTs from lobl... 84 6e-025
gb|CO172568.1|CO172568 NDL1_30_B08.g1_A029 Needles control ... 105 6e-025
gb|BQ655622.1|BQ655622 NXRV096_H10_F NXRV (Nsf Xylem Root w... 84 6e-025
gb|BX254523.1|BX254523 BX254523 Pinus pinaster differenciat... 69 6e-025
gb|DR098008.1|DR098008 STRR1_38_C04.g1_A033 Stem Response R... 68 8e-025
gb|DR022994.1|DR022994 STRS1_54_G05.g1_A034 Shoot tip pitch... 97 8e-025
gb|CF479523.1|CF479523 RTWW3_22_E06.g1_A022 Well-watered lo... 79 8e-025
dbj|BD267268.1| Compositions isolated from plant cells and ... 75 8e-025
gb|DR053691.1|DR053691 RTCA1_12_E12.g1_A029 Roots minus cal... 80 1e-024
dbj|BD267346.1| Compositions isolated from plant cells and ... 111 1e-024
gb|DR058555.1|DR058555 RTNIT1_12_B12.g1_A029 Roots minus ni... 111 1e-024
gb|CX713038.1|CX713038 RTPQ1_6_C12.g1_A032 Roots treated wi... 111 1e-024
dbj|BD266925.1| Compositions isolated from plant cells and ... 78 1e-024
gb|DT636541.1|DT636541 EST1151472 Normalized pine embryo li... 78 1e-024
gb|CO361947.1|CO361947 NDL2_8_D04.b1_A029 Needles control 2... 78 1e-024
gb|DR691139.1|DR691139 EST1081225 Normalized pine embryo li... 78 1e-024
gb|BX682640.1|BX682640 BX682640 Pinus pinaster differenciat... 91 1e-024
gb|CF667809.1|CF667809 RTCNT1_32_D10.g1_A029 Root control P... 60 1e-024
dbj|BD267213.1| Compositions isolated from plant cells and ... 67 2e-024
gb|CX652576.1|CX652576 COLD1_60_B11.b1_A029 Root cold Pinus... 106 2e-024
gb|DR011223.1|DR011223 HEAT1_4_G08.b1_A029 Root at 37 C for... 74 2e-024
gb|CX646801.1|CX646801 COLD1_11_D04.g1_A029 Root cold Pinus... 112 3e-024
gb|DR013721.1|DR013721 HEAT1_21_D01.b1_A029 Root at 37 C fo... 77 3e-024
gb|DR387373.1|DR387373 RTHG1_21_G08.b1_A029 Roots plus adde... 80 4e-024
gb|CO361317.1|CO361317 NDL2_4_D05.b1_A029 Needles control 2... 111 5e-024
dbj|BD267351.1| Compositions isolated from plant cells and ... 104 5e-024
gb|CO166154.1|CO166154 FLD1_59_E11.g1_A029 Root flooded Pin... 83 5e-024
gb|CX649748.1|CX649748 COLD1_41_F04.b1_A029 Root cold Pinus... 100 5e-024
gb|DR055524.1|DR055524 RTCA1_24_F05.b1_A029 Roots minus cal... 95 5e-024
dbj|BD267272.1| Compositions isolated from plant cells and ... 70 5e-024
gb|DR051070.1|DR051070 RTBOR1_27_B01.g1_A029 Roots plus add... 70 5e-024
gb|CF396365.1|CF396365 RTDS2_21_D02.g1_A021 Drought-stresse... 111 7e-024
gb|DR684308.1|DR684308 EST1074385 Normalized pine embryo li... 74 7e-024
gb|CF394146.1|CF394146 RTDS2_3_G11.g1_A021 Drought-stressed... 108 7e-024
gb|BX252090.1|BX252090 BX252090 Pinus pinaster differenciat... 82 7e-024
dbj|BD266928.1| Compositions isolated from plant cells and ... 71 7e-024
gb|CO166373.1|CO166373 FLD1_61_B08.g1_A029 Root flooded Pin... 111 9e-024
gb|CX652718.1|CX652718 COLD1_61_B10.b1_A029 Root cold Pinus... 72 1e-023
gb|DR167861.1|DR167861 RTPHOS1_21_D02.g1_A029 Roots minus p... 66 1e-023
gb|CX713766.1|CX713766 RTPQ1_12_G10.g1_A032 Roots treated w... 89 1e-023
gb|DR681853.1|DR681853 EST1071928 Normalized pine embryo li... 78 1e-023
gb|CV032802.1|CV032802 RTNACL1_18_A04.g1_A029 Roots plus ad... 73 1e-023
gb|BX681873.1|BX681873 BX681873 RS Pinus pinaster cDNA clon... 91 2e-023
gb|DT633601.1|DT633601 EST1148532 Normalized pine embryo li... 79 2e-023
gb|CO199471.1|CO199471 GEO2_1_A02.g1_A032 Root gravitropism... 71 2e-023
gb|DR686779.1|DR686779 EST1076857 Normalized pine embryo li... 79 2e-023
gb|CO174519.1|CO174519 NDL1_44_B09.g1_A029 Needles control ... 84 2e-023
gb|CO165294.1|CO165294 FLD1_53_D01.g1_A029 Root flooded Pin... 96 3e-023
gb|DR047992.1|DR047992 RTBOR1_6_A03.b2_A029 Roots plus adde... 82 3e-023
gb|BF517945.1|BF517945 NXSI_031_H08_F NXSI (Nsf Xylem Side ... 79 4e-023
gb|CO173114.1|CO173114 NDL1_34_D02.b1_A029 Needles control ... 69 4e-023
gb|CV031796.1|CV031796 RTNACL1_3_F04.g1_A029 Roots plus add... 68 5e-023
gb|CO165153.1|CO165153 FLD1_52_E09.g1_A029 Root flooded Pin... 70 5e-023
gb|BQ703224.1|BQ703224 NXSI_125_A02_F NXSI (Nsf Xylem Side ... 74 6e-023
gb|DR080092.1|DR080092 RTFEPL1_20_E02.b1_A029 Roots plus ad... 69 6e-023
gb|CX649831.1|CX649831 COLD1_41_F04.g1_A029 Root cold Pinus... 95 9e-023
gb|DR687328.1|DR687328 EST1077410 Normalized pine embryo li... 107 1e-022
gb|CO200129.1|CO200129 GEO2_5_C12.g1_A032 Root gravitropism... 72 1e-022
gb|CR393296.1|CR393296 CR393296 RN Pinus pinaster cDNA clon... 73 1e-022
gb|CO199979.1|CO199979 GEO2_4_E09.g1_A032 Root gravitropism... 99 2e-022
gb|DR385726.1|DR385726 RTHG1_10_A12.g1_A029 Roots plus adde... 62 2e-022
gb|BX254195.1|BX254195 BX254195 Pinus pinaster differenciat... 79 2e-022
dbj|BD267227.1| Compositions isolated from plant cells and ... 77 3e-022
gb|AW587733.1|AW587733 ST66B02 Pine TriplEx shoot tip libra... 90 3e-022
gb|CF390499.1|CF390499 RTDR2_19_E11.g1_A021 Loblolly pine r... 71 3e-022
gb|DR168607.1|DR168607 RTPHOS1_26_D05.g1_A029 Roots minus p... 71 4e-022
dbj|BD267340.1| Compositions isolated from plant cells and ... 77 4e-022
dbj|BD267387.1| Compositions isolated from plant cells and ... 77 4e-022
gb|BG040559.1|BG040559 NXSI_112_E09_F NXSI (Nsf Xylem Side ... 51 4e-022
gb|DT633466.1|DT633466 EST1148397 Normalized pine embryo li... 71 4e-022
gb|DR018923.1|DR018923 STRS1_26_E05.g1_A034 Shoot tip pitch... 71 4e-022
dbj|BD267205.1| Compositions isolated from plant cells and ... 71 4e-022
dbj|BD267385.1| Compositions isolated from plant cells and ... 78 5e-022
gb|BX250171.1|BX250171 BX250171 Pinus pinaster differenciat... 76 6e-022
gb|CO200331.1|CO200331 GEO2_6_G03.g1_A032 Root gravitropism... 86 6e-022
gb|DR686107.1|DR686107 EST1076185 Normalized pine embryo li... 74 7e-022
gb|DT633519.1|DT633519 EST1148450 Normalized pine embryo li... 74 8e-022
gb|DR182228.1|DR182228 RTMNUT1_43_E02.g1_A029 Roots minus m... 80 1e-021
gb|CF393154.1|CF393154 RTDR3_17_F10.g1_A022 Loblolly pine r... 79 1e-021
gb|DR180960.1|DR180960 RTMNUT1_35_H12.g1_A029 Roots minus m... 63 1e-021
gb|AW758745.1|AW758745 NXNV_089_A12_F Nsf Xylem Normal wood... 83 1e-021
gb|DR078364.1|DR078364 RTFEPL1_3_E03.g1_A029 Roots plus add... 51 1e-021
gb|CO363405.1|CO363405 RTK1_9_C03.g1_A029 Roots minus potas... 79 1e-021
gb|DR165259.1|DR165259 RTPHOS1_3_E12.g1_A029 Roots minus ph... 89 1e-021
gb|DR048068.1|DR048068 RTBOR1_6_H11.b2_A029 Roots plus adde... 76 1e-021
gb|DR059096.1|DR059096 RTNIT1_15_E01.g1_A029 Roots minus ni... 65 1e-021
dbj|BD266931.1| Compositions isolated from plant cells and ... 62 1e-021
gb|CO361910.1|CO361910 NDL2_7_H06.g1_A029 Needles control 2... 62 1e-021
gb|DR078923.1|DR078923 RTFEPL1_7_F10.g1_A029 Roots plus add... 79 1e-021
gb|CX651001.1|CX651001 COLD1_49_B02.g1_A029 Root cold Pinus... 84 1e-021
gb|DR385473.1|DR385473 RTHG1_8_H01.g1_A029 Roots plus added... 72 2e-021
gb|DR015775.1|DR015775 STRS1_5_C04.g1_A034 Shoot tip pitch ... 71 2e-021
gb|CO363349.1|CO363349 RTK1_9_E09.b1_A029 Roots minus potas... 84 2e-021
gb|BM157785.1|BM157785 NXLV_025_A12_F NXLV (Nsf Xylem Late ... 63 2e-021
dbj|BD267211.1| Compositions isolated from plant cells and ... 75 2e-021
gb|CO169185.1|CO169185 NDL1_5_G05.b1_A029 Needles control P... 65 3e-021
gb|DT632627.1|DT632627 EST1147558 Normalized pine embryo li... 81 3e-021
gb|DR685116.1|DR685116 EST1075193 Normalized pine embryo li... 81 3e-021
dbj|BD267226.1| Compositions isolated from plant cells and ... 72 3e-021
gb|CO165011.1|CO165011 FLD1_51_F01.g1_A029 Root flooded Pin... 71 5e-021
gb|DR686432.1|DR686432 EST1076510 Normalized pine embryo li... 71 5e-021
dbj|BD267197.1| Compositions isolated from plant cells and ... 80 5e-021
gb|BF778937.1|BF778937 NXSI_091_B02_F NXSI (Nsf Xylem Side ... 66 6e-021
gb|DR070688.1|DR070688 RTDK1_15_A10.b1_A029 Roots, dark Pin... 87 6e-021
gb|DR069889.1|DR069889 RTDK1_10_B08.b1_A029 Roots, dark Pin... 87 6e-021
gb|CO365254.1|CO365254 RTK1_24_C11.g1_A029 Roots minus pota... 95 7e-021
gb|CO160784.1|CO160784 FLD1_24_F09.b1_A029 Root flooded Pin... 95 7e-021
gb|DR091249.1|DR091249 RTAL1_20_G10.b1_A029 Roots plus adde... 84 7e-021
dbj|BD267261.1| Compositions isolated from plant cells and ... 64 7e-021
gb|CO165023.1|CO165023 FLD1_51_G08.g1_A029 Root flooded Pin... 78 9e-021
>gb|BE657080.1|BE657080 NXCI_042_B12_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_042_B12 5' similar to Arabidopsis
thaliana sequence At2g37050 putative receptor-like
protein kinase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 381
Score = 118 bits (253), Expect(3) = 1e-047
Identities = 48/67 (71%), Positives = 56/67 (83%)
Frame = -3 / +2
Query: 268 ADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLS 89
A EK W+ RL+IAED+AKGIEYLH GC+P IIHRDLKSSNILLDK MRAKV+DFGLS
Sbjct: 116 AGEEKHLDWITRLKIAEDAAKGIEYLHAGCNPNIIHRDLKSSNILLDKEMRAKVSDFGLS 295
Query: 88 KPAVDGS 68
+ A +G+
Sbjct: 296 RMAAEGT 316
Score = 72.1 bits (151), Expect(3) = 1e-047
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = -3 / +2
Query: 379 IHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHLRGADNEK 254
IHHR+LV GY Q G NILVYE+MHNGTL+EHL G E+
Sbjct: 2 IHHRNLVALFGYCQDQGTNILVYEYMHNGTLREHLHGPAGEE 127
Score = 38.2 bits (77), Expect(3) = 1e-047
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = -3 / +2
Query: 70 SHVSSIVRGTVGYLDP 23
+HVSS+VRGTVGYLDP
Sbjct: 317 THVSSLVRGTVGYLDP 364
>gb|DR079189.1|DR079189 RTFEPL1_9_E02.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_E02_A029 5', mRNA sequence
Length = 835
Score = 171 bits (367), Expect(2) = 4e-047
Identities = 74/132 (56%), Positives = 91/132 (68%)
Frame = -3 / +2
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L DG +A+K S QG REF NE+ LLSR+HHR+LV+ LGY G+ +LVYEFM N
Sbjct: 257 LNDGTIVAIKRAQEGSLQGEREFSNEIELLSRVHHRNLVSLLGYCDDQGEQMLVYEFMGN 436
Query: 295 GTLKEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMR 116
GTL++HL G K + RL IA SA+GI YLHT +P I HRD+K++NILLD N
Sbjct: 437 GTLRDHLSGRSKLKPLDFAMRLHIALGSARGIMYLHTEANPPIFHRDIKATNILLDDNFN 616
Query: 115 AKVADFGLSKPA 80
A+VADFGLSK A
Sbjct: 617 ARVADFGLSKLA 652
Score = 38.2 bits (77), Expect(2) = 4e-047
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -3 / +2
Query: 67 HVSSIVRGTVGYLDPEY 17
HVS++V+GT GYLDPEY
Sbjct: 686 HVSTVVKGTPGYLDPEY 736
>gb|DR017828.1|DR017828 STRS1_18_F03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_18_F03_A034 5', mRNA sequence
Length = 681
Score = 99.6 bits (211), Expect(3) = 8e-046
Identities = 36/58 (62%), Positives = 49/58 (84%)
Frame = -3 / +1
Query: 244 WLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSKPAVDG 71
W RL+IA D+A+G+EYLH GC+P IIHRD+K++NILLD+N K+ADFGLS+ A++G
Sbjct: 274 WKTRLKIASDAAQGLEYLHVGCTPKIIHRDIKTANILLDRNFNGKLADFGLSRMAIEG 447
Score = 87.7 bits (185), Expect(3) = 8e-046
Identities = 34/73 (46%), Positives = 54/73 (73%)
Frame = -3 / +1
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L G++IAVK+L+ QG++EFLNEV +LS++HH++LV+ LGY + + +LVYE+M
Sbjct: 40 LQQGKDIAVKVLSLFGGQGVQEFLNEVDVLSKVHHKNLVSLLGYCNETSELMLVYEYMSG 219
Query: 295 GTLKEHLRGADNE 257
G+L++HL +E
Sbjct: 220 GSLRDHLYAPTSE 258
Score = 35.9 bits (72), Expect(3) = 8e-046
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = -3 / +1
Query: 76 DGSHVSSIVRGTVGYLDPEY 17
+ S+V++ V+GT+GYLDPEY
Sbjct: 448 EASYVTTSVKGTLGYLDPEY 507
>gb|DR048385.1|DR048385 RTBOR1_8_B10.g2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_8_B10_A029 5', mRNA sequence
Length = 715
Score = 154 bits (331), Expect(2) = 1e-043
Identities = 64/127 (50%), Positives = 92/127 (72%)
Frame = -3 / +2
Query: 466 GREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTL 287
G ++AVK + QGI EF E+ +LS++ HRHLV+ +GY +++ + ILVY++M G L
Sbjct: 110 GVKVAVKRGNPLAEQGIHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAKGPL 289
Query: 286 KEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKV 107
+ HL G N SW +RLEI +A+G+ YLHTG + TIIHRD+K++NIL+D+N+ AKV
Sbjct: 290 RGHLYGNSNLTPLSWKQRLEICIGAARGLHYLHTGAAQTIIHRDVKTTNILIDENLVAKV 469
Query: 106 ADFGLSK 86
+DFGLSK
Sbjct: 470 SDFGLSK 490
Score = 42.8 bits (87), Expect(2) = 1e-043
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = -3 / +2
Query: 85 PAVDGSHVSSIVRGTVGYLDPEY 17
P +D +HVS++V+G+ GYLDPEY
Sbjct: 497 PTLDHTHVSTVVKGSFGYLDPEY 565
>gb|DT637449.1|DT637449 EST1152380 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMH379 3' end, mRNA sequence
Length = 832
Score = 86.8 bits (183), Expect(3) = 6e-043
Identities = 34/71 (47%), Positives = 50/71 (70%)
Frame = -3 / +2
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L DG ++AVK S QG+ EF E+ +LS++ HRHLV+ +GY ++ + ILVYE+M N
Sbjct: 17 LEDGTQVAVKRGNPRSEQGLTEFQTEIEMLSKLRHRHLVSLIGYCEEHSEMILVYEYMAN 196
Query: 295 GTLKEHLRGAD 263
GTL+ HL G++
Sbjct: 197 GTLRSHLYGSN 229
Score = 85.8 bits (181), Expect(3) = 6e-043
Identities = 34/54 (62%), Positives = 44/54 (81%)
Frame = -3 / +2
Query: 247 SWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK 86
SW +RLE+ +A+G+ YLHTG + IIHRD+K++NILLD+N AKVADFGLSK
Sbjct: 242 SWKQRLEVCIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFVAKVADFGLSK 403
Score = 40.9 bits (83), Expect(3) = 6e-043
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -3 / +2
Query: 85 PAVDGSHVSSIVRGTVGYLDPEY 17
P +D +HVS+ V+G+ GYLDPEY
Sbjct: 410 PTLDQTHVSTAVKGSFGYLDPEY 478
>gb|DR692320.1|DR692320 EST1082408 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADK80 3' end, mRNA sequence
Length = 718
Score = 86.8 bits (183), Expect(3) = 6e-043
Identities = 34/71 (47%), Positives = 50/71 (70%)
Frame = -3 / +3
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L DG ++AVK S QG+ EF E+ +LS++ HRHLV+ +GY ++ + ILVYE+M N
Sbjct: 9 LEDGTQVAVKRGNPRSEQGLTEFQTEIEMLSKLRHRHLVSLIGYCEEHSEMILVYEYMAN 188
Query: 295 GTLKEHLRGAD 263
GTL+ HL G++
Sbjct: 189 GTLRSHLYGSN 221
Score = 85.8 bits (181), Expect(3) = 6e-043
Identities = 34/54 (62%), Positives = 44/54 (81%)
Frame = -3 / +3
Query: 247 SWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK 86
SW +RLE+ +A+G+ YLHTG + IIHRD+K++NILLD+N AKVADFGLSK
Sbjct: 234 SWKQRLEVCIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFVAKVADFGLSK 395
Score = 40.9 bits (83), Expect(3) = 6e-043
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -3 / +3
Query: 85 PAVDGSHVSSIVRGTVGYLDPEY 17
P +D +HVS+ V+G+ GYLDPEY
Sbjct: 402 PTLDQTHVSTAVKGSFGYLDPEY 470
>gb|DT635766.1|DT635766 EST1150697 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGK38 3' end, mRNA sequence
Length = 805
Score = 156 bits (335), Expect(2) = 9e-043
Identities = 68/130 (52%), Positives = 85/130 (65%)
Frame = -3 / +1
Query: 469 DGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGT 290
DG +A+K S QG REF E+ LLSR+HHR+LV+ +GY G+ +LVYE+M NGT
Sbjct: 208 DGMVVAIKRARGGSLQGEREFSTEIELLSRLHHRNLVSLVGYCDDHGEQMLVYEYMENGT 387
Query: 289 LKEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAK 110
L +HL G K + RL IA SA+GI YLH +P I HRD+K+SNILLD A+
Sbjct: 388 LHDHLSGRLQSKPLDFALRLRIALGSARGIMYLHNEANPPIFHRDIKASNILLDDKFNAR 567
Query: 109 VADFGLSKPA 80
VAD GLSK A
Sbjct: 568 VADLGLSKLA 597
Score = 38.2 bits (77), Expect(2) = 9e-043
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -3 / +1
Query: 67 HVSSIVRGTVGYLDPEY 17
HVS++V+GT GYLDPEY
Sbjct: 631 HVSTVVKGTPGYLDPEY 681
>gb|DT635729.1|DT635729 EST1150660 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGJ94 3' end, mRNA sequence
Length = 771
Score = 156 bits (335), Expect(2) = 9e-043
Identities = 68/130 (52%), Positives = 85/130 (65%)
Frame = -3 / +1
Query: 469 DGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGT 290
DG +A+K S QG REF E+ LLSR+HHR+LV+ +GY G+ +LVYE+M NGT
Sbjct: 208 DGMVVAIKRARGGSLQGEREFSTEIELLSRLHHRNLVSLVGYCDDHGEQMLVYEYMENGT 387
Query: 289 LKEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAK 110
L +HL G K + RL IA SA+GI YLH +P I HRD+K+SNILLD A+
Sbjct: 388 LHDHLSGRLQSKPLDFALRLRIALGSARGIMYLHNEANPPIFHRDIKASNILLDDKFNAR 567
Query: 109 VADFGLSKPA 80
VAD GLSK A
Sbjct: 568 VADLGLSKLA 597
Score = 38.2 bits (77), Expect(2) = 9e-043
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -3 / +1
Query: 67 HVSSIVRGTVGYLDPEY 17
HVS++V+GT GYLDPEY
Sbjct: 631 HVSTVVKGTPGYLDPEY 681
>gb|DR689835.1|DR689835 EST1079921 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACN96 3' end, mRNA sequence
Length = 671
Score = 156 bits (335), Expect(2) = 8e-042
Identities = 68/130 (52%), Positives = 85/130 (65%)
Frame = -3 / +2
Query: 469 DGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGT 290
DG +A+K S QG REF E+ LLSR+HHR+LV+ +GY G+ +LVYE+M NGT
Sbjct: 200 DGMVVAIKRARGGSLQGEREFSTEIELLSRLHHRNLVSLVGYCDDHGEQMLVYEYMENGT 379
Query: 289 LKEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAK 110
L +HL G K + RL IA SA+GI YLH +P I HRD+K+SNILLD A+
Sbjct: 380 LHDHLSGRLQSKPLDFALRLRIALGSARGIMYLHNEANPPIFHRDIKASNILLDDKFNAR 559
Query: 109 VADFGLSKPA 80
VAD GLSK A
Sbjct: 560 VADLGLSKLA 589
Score = 35.0 bits (70), Expect(2) = 8e-042
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -3 / +2
Query: 67 HVSSIVRGTVGYLDPE 20
HVS++V+GT GYLDPE
Sbjct: 623 HVSTVVKGTPGYLDPE 670
>gb|BE582471.1|BE582471 NXCI_033_G11_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_033_G11 5' similar to Arabidopsis
thaliana sequence At2g37050 putative receptor-like
protein kinase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 380
Score = 110 bits (234), Expect(3) = 1e-041
Identities = 45/63 (71%), Positives = 51/63 (80%)
Frame = -3 / +2
Query: 268 ADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLS 89
A EK W+ RL+IAED+AKGIEYLH GC+P IIHRDLKSSNILLDK M KV+DFGLS
Sbjct: 116 AGEEKHLDWITRLKIAEDAAKGIEYLHAGCNPNIIHRDLKSSNILLDKEMXXKVSDFGLS 295
Query: 88 KPA 80
+ A
Sbjct: 296 RMA 304
Score = 72.1 bits (151), Expect(3) = 1e-041
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = -3 / +2
Query: 379 IHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHLRGADNEK 254
IHHR+LV GY Q G NILVYE+MHNGTL+EHL G E+
Sbjct: 2 IHHRNLVALFGYCQDQGTNILVYEYMHNGTLREHLHGPAGEE 127
Score = 26.7 bits (52), Expect(3) = 1e-041
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3 / +2
Query: 70 SHVSSIVRGTVGYL 29
+HVSS+VRGT YL
Sbjct: 317 THVSSLVRGTXXYL 358
>gb|DR683361.1|DR683361 EST1073437 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAG28 3' end, mRNA sequence
Length = 758
Score = 101 bits (215), Expect(3) = 3e-040
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = -3 / +1
Query: 247 SWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSKPAVDG 71
+W RL IA D+A+G+EYLH GC+P IIHRD+KS+NILLD NM KVADFGLS+ +VDG
Sbjct: 556 NWKTRLRIALDAAQGLEYLHLGCTPKIIHRDVKSANILLDANMNGKVADFGLSRISVDG 732
Score = 75.8 bits (159), Expect(3) = 3e-040
Identities = 30/71 (42%), Positives = 52/71 (73%)
Frame = -3 / +1
Query: 469 DGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGT 290
+G +IAVK+L+ S +G+ +F NEV LLS+I++++LV+ LG+ + + +L+YE+M G+
Sbjct: 331 EGIDIAVKVLSVFSTEGLHQFQNEVDLLSKINYKNLVSLLGFCNESKEVMLIYEYMSEGS 510
Query: 289 LKEHLRGADNE 257
L++HL G E
Sbjct: 511 LRDHLYGRSAE 543
Score = 27.2 bits (53), Expect(3) = 3e-040
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / +3
Query: 518 KNWXXRLWHSILWKVG 471
++W R W SILW +G
Sbjct: 285 EDWARRFWISILW*IG 332
>gb|CO158440.1|CO158440 FLD1_6_H11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_6_H11_A029 5', mRNA sequence
Length = 787
Score = 90.9 bits (192), Expect(3) = 3e-039
Identities = 38/71 (53%), Positives = 47/71 (66%)
Frame = -3 / +1
Query: 283 EHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVA 104
EH + W RL+IA +A+G+ YLH C P IIHRD+K+SNILLD N AKVA
Sbjct: 448 EHHLHGKGQPTMDWPTRLKIATGAARGLAYLHEDCYPKIIHRDIKASNILLDSNFEAKVA 627
Query: 103 DFGLSKPAVDG 71
DFGL+K A +G
Sbjct: 628 DFGLAKLASEG 660
Score = 79.0 bits (166), Expect(3) = 3e-039
Identities = 34/69 (49%), Positives = 44/69 (63%)
Frame = -3 / +1
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L + IAVK L QG REF EV ++SR+HHRHLV+ +GY + +LVYEF+ N
Sbjct: 259 LPGNKTIAVKQLKVGGSQGEREFQAEVEIISRVHHRHLVSLVGYCIAGSQRLLVYEFVPN 438
Query: 295 GTLKEHLRG 269
TL+ HL G
Sbjct: 439 DTLEHHLHG 465
Score = 31.3 bits (62), Expect(3) = 3e-039
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3 / +1
Query: 70 SHVSSIVRGTVGYLDPEY 17
+HVS+ V GT GYL PEY
Sbjct: 664 THVSTRVMGTFGYLAPEY 717
>gb|CO201810.1|CO201810 RTCNT2_8_G01.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_8_G01_A029 3', mRNA sequence
Length = 762
Score = 90.9 bits (192), Expect(3) = 3e-039
Identities = 38/71 (53%), Positives = 47/71 (66%)
Frame = -3 / -1
Query: 283 EHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVA 104
EH + W RL+IA +A+G+ YLH C P IIHRD+K+SNILLD N AKVA
Sbjct: 546 EHHLHGKGQPTMDWPTRLKIATGAARGLAYLHEDCYPKIIHRDIKASNILLDSNFEAKVA 367
Query: 103 DFGLSKPAVDG 71
DFGL+K A +G
Sbjct: 366 DFGLAKLASEG 334
Score = 79.0 bits (166), Expect(3) = 3e-039
Identities = 34/69 (49%), Positives = 44/69 (63%)
Frame = -3 / -1
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L + IAVK L QG REF EV ++SR+HHRHLV+ +GY + +LVYEF+ N
Sbjct: 735 LPGNKTIAVKQLKVGGSQGEREFQAEVEIISRVHHRHLVSLVGYCIAGSQRLLVYEFVPN 556
Query: 295 GTLKEHLRG 269
TL+ HL G
Sbjct: 555 DTLEHHLHG 529
Score = 31.3 bits (62), Expect(3) = 3e-039
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3 / -1
Query: 70 SHVSSIVRGTVGYLDPEY 17
+HVS+ V GT GYL PEY
Sbjct: 330 THVSTRVMGTFGYLAPEY 277
>gb|CF478389.1|CF478389 RTWW3_18_H02.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_18_H02_A022 5', mRNA sequence
Length = 651
Score = 89.0 bits (188), Expect(3) = 9e-039
Identities = 37/71 (52%), Positives = 47/71 (66%)
Frame = -3 / +3
Query: 283 EHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVA 104
EH + W RL+IA +A+G+ YLH C P IIHRD+++SNILLD N AKVA
Sbjct: 279 EHHLHGKGQPTMDWPTRLKIATGAARGLAYLHEDCYPKIIHRDIEASNILLDSNFEAKVA 458
Query: 103 DFGLSKPAVDG 71
DFGL+K A +G
Sbjct: 459 DFGLAKLASEG 491
Score = 79.0 bits (166), Expect(3) = 9e-039
Identities = 34/69 (49%), Positives = 44/69 (63%)
Frame = -3 / +3
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L + IAVK L QG REF EV ++SR+HHRHLV+ +GY + +LVYEF+ N
Sbjct: 90 LPGNKTIAVKQLKVGGSQGEREFQAEVEIISRVHHRHLVSLVGYCIAGSQRLLVYEFVPN 269
Query: 295 GTLKEHLRG 269
TL+ HL G
Sbjct: 270 DTLEHHLHG 296
Score = 31.3 bits (62), Expect(3) = 9e-039
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3 / +3
Query: 70 SHVSSIVRGTVGYLDPEY 17
+HVS+ V GT GYL PEY
Sbjct: 495 THVSTRVMGTFGYLAPEY 548
>gb|DT631649.1|DT631649 EST1146580 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFB14 3' end, mRNA sequence
Length = 794
Score = 95.9 bits (203), Expect(3) = 1e-038
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = -3 / +3
Query: 247 SWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSKPAV 77
+W RL IA D+A+G+EYLH GC+P IIHRD+KS+NILLD NM KVADFGLS+ +V
Sbjct: 564 NWKTRLRIALDAAQGLEYLHLGCTPKIIHRDVKSANILLDANMNGKVADFGLSRISV 734
Score = 75.8 bits (159), Expect(3) = 1e-038
Identities = 30/71 (42%), Positives = 52/71 (73%)
Frame = -3 / +3
Query: 469 DGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGT 290
+G +IAVK+L+ S +G+ +F NEV LLS+I++++LV+ LG+ + + +L+YE+M G+
Sbjct: 339 EGIDIAVKVLSVFSTEGLHQFQNEVDLLSKINYKNLVSLLGFCNESKEVMLIYEYMSEGS 518
Query: 289 LKEHLRGADNE 257
L++HL G E
Sbjct: 519 LRDHLYGRSAE 551
Score = 27.2 bits (53), Expect(3) = 1e-038
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / +2
Query: 518 KNWXXRLWHSILWKVG 471
++W R W SILW +G
Sbjct: 293 EDWARRFWISILW*IG 340
>gb|CF389801.1|CF389801 RTDR2_5_E12.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_5_E12_A021 5', mRNA
sequence
Length = 693
Score = 93.2 bits (197), Expect(4) = 2e-038
Identities = 34/58 (58%), Positives = 47/58 (81%)
Frame = -3 / +2
Query: 247 SWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSKPAVD 74
+W RL+IA D+A+G+EYLH GC+P IIHRD+K++N+LLD N+ K+ADFGLS+ D
Sbjct: 272 NWKGRLKIALDAAQGLEYLHVGCTPKIIHRDIKTANLLLDSNLNGKLADFGLSRVTTD 445
Score = 55.1 bits (114), Expect(4) = 2e-038
Identities = 21/44 (47%), Positives = 33/44 (75%)
Frame = -3 / +2
Query: 400 EVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHLRG 269
+V LLS+I+HR+LV+ LGY + + +L+YE M G+L++HL G
Sbjct: 116 QVELLSKINHRNLVSLLGYCNKTDQVMLIYEHMSGGSLRDHLYG 247
Score = 41.4 bits (84), Expect(4) = 2e-038
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = -3 / +2
Query: 76 DGSHVSSIVRGTVGYLDPEY 17
+G+HV++ V+GT+GYLDPEY
Sbjct: 449 EGTHVTTTVKGTIGYLDPEY 508
Score = 26.3 bits (51), Expect(4) = 2e-038
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3 / +3
Query: 430 SYQGIREFLNEVTL 389
S QGI+EFLNEV L
Sbjct: 9 SRQGIQEFLNEVIL 50
>gb|CF476188.1|CF476188 RTWW2_21_F05.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_21_F05_A021 5', mRNA sequence
Length = 678
Score = 98.2 bits (208), Expect(3) = 3e-037
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3 / +1
Query: 247 SWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSKPAVDG 71
+W RL+IA D+A+G+EYLH GC+P IIHRD+K++NILLD+N K+ADFGLS+ ++G
Sbjct: 169 NWKTRLQIASDAAQGLEYLHIGCTPKIIHRDIKTANILLDRNFNGKLADFGLSRMTIEG 345
Score = 64.3 bits (134), Expect(3) = 3e-037
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = -3 / +1
Query: 412 EFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHLRG 269
EFLNEV L SR+HH++LV+ LGY + + +LVYE M G+LK+ L G
Sbjct: 1 EFLNEVELFSRVHHKNLVSLLGYCIESRELMLVYEHMSGGSLKDRLYG 144
Score = 31.8 bits (63), Expect(3) = 3e-037
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -3 / +1
Query: 76 DGSHVSSIVRGTVGYLDPEY 17
+ S+V + V+GT+GYLDP Y
Sbjct: 346 EASYVITSVKGTLGYLDPAY 405
>gb|DT627163.1|DT627163 EST1160239 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAV61 5' end, mRNA sequence
Length = 965
Score = 86.3 bits (182), Expect(4) = 3e-037
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = -3 / +3
Query: 247 SWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLS 89
SW R+ IA D+A+GIEYLHT P IIHRD+KSSNILLD N A+V+DFGLS
Sbjct: 327 SWSDRIRIALDAARGIEYLHTYAVPPIIHRDIKSSNILLDGNWTARVSDFGLS 485
Score = 63.8 bits (133), Expect(4) = 3e-037
Identities = 22/45 (48%), Positives = 34/45 (75%)
Frame = -3 / +3
Query: 409 FLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHL 275
F +E+ LSR+HH+HLV+ +GY ++ + +LVYE+M NG L +HL
Sbjct: 150 FQSELAFLSRLHHKHLVSLIGYCEEGDERMLVYEYMPNGALYDHL 284
Score = 38.2 bits (77), Expect(4) = 3e-037
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3 / +3
Query: 85 PAVDGSHVSSIVRGTVGYLDPEY 17
P V H+S++ GTVGY+DPEY
Sbjct: 495 PDVQDGHLSTMAAGTVGYMDPEY 563
Score = 23.5 bits (45), Expect(4) = 3e-037
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 475 LADGREIAVK 446
LADGRE+A+K
Sbjct: 72 LADGREVAIK 101
>gb|DN460720.1|DN460720 EST956519 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPII176 5' end, mRNA sequence
Length = 960
Score = 86.3 bits (182), Expect(4) = 3e-037
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = -3 / +1
Query: 247 SWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLS 89
SW R+ IA D+A+GIEYLHT P IIHRD+KSSNILLD N A+V+DFGLS
Sbjct: 328 SWSDRIRIALDAARGIEYLHTYAVPPIIHRDIKSSNILLDGNWTARVSDFGLS 486
Score = 63.8 bits (133), Expect(4) = 3e-037
Identities = 22/45 (48%), Positives = 34/45 (75%)
Frame = -3 / +1
Query: 409 FLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHL 275
F +E+ LSR+HH+HLV+ +GY ++ + +LVYE+M NG L +HL
Sbjct: 151 FQSELAFLSRLHHKHLVSLIGYCEEGDERMLVYEYMPNGALYDHL 285
Score = 38.2 bits (77), Expect(4) = 3e-037
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3 / +1
Query: 85 PAVDGSHVSSIVRGTVGYLDPEY 17
P V H+S++ GTVGY+DPEY
Sbjct: 496 PDVQDGHLSTMAAGTVGYMDPEY 564
Score = 23.5 bits (45), Expect(4) = 3e-037
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 475 LADGREIAVK 446
LADGRE+A+K
Sbjct: 73 LADGREVAIK 102
>gb|DR387131.1|DR387131 RTHG1_19_D12.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_19_D12_A029 5', mRNA sequence
Length = 830
Score = 137 bits (294), Expect(2) = 8e-036
Identities = 60/130 (46%), Positives = 85/130 (65%)
Frame = -3 / +2
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
+ DG+EIAVK L+ S QG REF+NEV L+++I HR+LV LG + + +LVYE++ N
Sbjct: 116 IEDGKEIAVKKLSLRSLQGKREFMNEVKLVAKIQHRNLVNLLGCCAEGSERLLVYEYLPN 295
Query: 295 GTLKEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMR 116
+L + L + W KR I A+G+ YLH IIHRD+K+SNILLD+N+
Sbjct: 296 KSLDKILFDPNKRNQLHWQKRYNIITGVARGLLYLHEDSQLRIIHRDIKASNILLDENLN 475
Query: 115 AKVADFGLSK 86
K+ADFGL++
Sbjct: 476 PKIADFGLAR 505
Score = 33.6 bits (67), Expect(2) = 8e-036
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3 / +2
Query: 76 DGSHVSSIVRGTVGYLDPEY 17
D SHVS+ V GT GY+ PEY
Sbjct: 518 DESHVSTRVAGTYGYMAPEY 577
>gb|DR690041.1|DR690041 EST1080127 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACQ41 3' end, mRNA sequence
Length = 785
Score = 150 bits (322), Expect = 1e-035
Identities = 62/125 (49%), Positives = 90/125 (72%)
Frame = -3 / +1
Query: 466 GREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTL 287
G ++AVK + QGI EF E+ +LS++ HRHLV+ +GY +++ + ILVY++M G L
Sbjct: 409 GVKVAVKRGNPLAEQGIHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAKGPL 588
Query: 286 KEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKV 107
+ HL G N SW +RLEI +A+G+ YLHTG + TIIHRD+K++NIL+D+N+ AKV
Sbjct: 589 RGHLYGNSNLTPLSWKQRLEICIGAARGLHYLHTGAAQTIIHRDVKTTNILIDENLVAKV 768
Query: 106 ADFGL 92
+DFGL
Sbjct: 769 SDFGL 783
>gb|DR023122.1|DR023122 STRS1_55_D03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_55_D03_A034 5', mRNA sequence
Length = 777
Score = 133 bits (286), Expect(2) = 3e-035
Identities = 57/130 (43%), Positives = 80/130 (61%)
Frame = -3 / +3
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L+DGRE+AVK L S QG EF NE L+SR+ HR+LV +G S + + +LVYE++
Sbjct: 174 LSDGREVAVKRLKIGSRQGDVEFFNEANLISRVQHRNLVKLIGCSVESSERLLVYEYLQK 353
Query: 295 GTLKEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMR 116
+L + + W R EI +A+G+ YLH IIH+D+K+SN+LLD R
Sbjct: 354 SSLDRIIFDKTKRHLLDWRARYEIIVGTARGLAYLHEESEIRIIHKDIKASNVLLDNKNR 533
Query: 115 AKVADFGLSK 86
K+ADFGL+K
Sbjct: 534 PKIADFGLAK 563
Score = 35.4 bits (71), Expect(2) = 3e-035
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -3 / +3
Query: 82 AVDGSHVSSIVRGTVGYLDPEY 17
A D SHVS+ V GT+GY+ PEY
Sbjct: 570 AEDESHVSTRVAGTLGYMAPEY 635
>gb|CF670534.1|CF670534 RTCNT1_50_H04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_50_H04_A029 5', mRNA sequence
Length = 717
Score = 95.0 bits (201), Expect(5) = 7e-035
Identities = 36/58 (62%), Positives = 48/58 (82%)
Frame = -3 / +3
Query: 244 WLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSKPAVDG 71
W RL IA + A+G+E++H GC+P IIHRD+K++NILLD NM AK+ADFG+SK A+DG
Sbjct: 456 WKTRLNIALNVAQGLEFMHAGCTPKIIHRDVKTANILLDNNMNAKLADFGISKIAMDG 629
Score = 48.3 bits (99), Expect(5) = 7e-035
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = -3 / +3
Query: 427 YQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHLRGADN 260
+ +FLNE +LSR +++L+ GY ++ +L+YE M G+L ++L G N
Sbjct: 282 FSTFHQFLNEADVLSRAQNKNLMPLHGYCREPKCPMLIYEHMSRGSLSDNLHGHSN 449
Score = 29.9 bits (59), Expect(5) = 7e-035
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2 / +2
Query: 530 QI*EKNWXXRLWHSILWKVG*WER 459
++* +NW L ILW V WER
Sbjct: 194 RL*SRNWTRELGKGILW*VAGWER 265
Score = 24.9 bits (48), Expect(5) = 7e-035
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = -3 / +3
Query: 61 SSIVRGTVGYLDPEYL 14
+++ +GT GY+ PEY+
Sbjct: 648 TAMAKGTPGYIAPEYI 695
Score = 22.6 bits (43), Expect(5) = 7e-035
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / +3
Query: 475 LADGREIAVKLLT 437
L DGR++AVKL +
Sbjct: 249 LRDGRDVAVKLFS 287
>gb|DR694986.1|DR694986 EST1085079 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEJ18 3' end, mRNA sequence
Length = 796
Score = 147 bits (316), Expect = 9e-035
Identities = 59/116 (50%), Positives = 83/116 (71%)
Frame = -3 / +2
Query: 421 GIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHLRGADNEKITSW 242
G ++F NE+T+LSR+HHR LV G+ + G+ ILVYEFM NG L + LRG ++I +W
Sbjct: 2 GHKQFQNEITILSRLHHRSLVKLEGFCHEAGEQILVYEFMKNGNLNDLLRGEYQKEILTW 181
Query: 241 LKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSKPAVD 74
KR+EI A+G++YLH+ P +IHRD+K SNILLD + AK++DFG+SK A +
Sbjct: 182 SKRIEILLAVAQGLDYLHSFSEPPVIHRDIKPSNILLDDHFNAKLSDFGISKSAAE 349
>gb|DT639178.1|DT639178 EST1154109 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHN91 3' end, mRNA sequence
Length = 847
Score = 147 bits (316), Expect = 9e-035
Identities = 59/116 (50%), Positives = 83/116 (71%)
Frame = -3 / +1
Query: 421 GIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHLRGADNEKITSW 242
G ++F NE+T+LSR+HHR LV G+ + G+ ILVYEFM NG L + LRG ++I +W
Sbjct: 10 GHKQFQNEITILSRLHHRSLVKLEGFCHEAGEQILVYEFMKNGNLNDLLRGEYQKEILTW 189
Query: 241 LKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSKPAVD 74
KR+EI A+G++YLH+ P +IHRD+K SNILLD + AK++DFG+SK A +
Sbjct: 190 SKRIEILLAVAQGLDYLHSFSEPPVIHRDIKPSNILLDDHFNAKLSDFGISKSAAE 357
>gb|CF477737.1|CF477737 RTWW3_9_A05.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_9_A05_A022 5', mRNA sequence
Length = 666
Score = 79.4 bits (167), Expect(3) = 1e-034
Identities = 30/53 (56%), Positives = 43/53 (81%)
Frame = -3 / +3
Query: 244 WLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK 86
W +R++IA +AKG+EYLH +P +I+RDLKSSNILLD++ K++DFGL+K
Sbjct: 405 WNRRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEDFHPKLSDFGLAK 563
Score = 73.5 bits (154), Expect(3) = 1e-034
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = -3 / +3
Query: 466 GREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTL 287
G+ +AVK L + QG REFL EV +LS +HH +LV +GY + +LVYE+M G+L
Sbjct: 180 GQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSL 359
Query: 286 KEHLRGADNEK 254
++HL +K
Sbjct: 360 EDHLHDLSPDK 392
Score = 32.7 bits (65), Expect(3) = 1e-034
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 85 PAVDGSHVSSIVRGTVGYLDPEY 17
P D +HVS+ V GT GY PEY
Sbjct: 570 PVGDKTHVSTRVMGTYGYCAPEY 638
>gb|DT633576.1|DT633576 EST1148507 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFW39 3' end, mRNA sequence
Length = 875
Score = 129 bits (277), Expect(2) = 6e-034
Identities = 57/130 (43%), Positives = 83/130 (63%)
Frame = -3 / +1
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L + + IA+K L Q +REF E+ + I HR+LV+ GYS N+L Y++M N
Sbjct: 13 LKNCKTIAIKRLYTHHPQSLREFETELETVGSIKHRNLVSLHGYSLSPHGNLLFYDYMVN 192
Query: 295 GTLKEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMR 116
G+L + L G+ + W RL+IA +A+G+ YLH C+P IIHRD+K+SNILLD N
Sbjct: 193 GSLFDILHGSSKKIKIDWNTRLKIALGAAQGLAYLHHDCNPRIIHRDVKTSNILLDDNFE 372
Query: 115 AKVADFGLSK 86
A ++DFG++K
Sbjct: 373 AHLSDFGIAK 402
Score = 35.0 bits (70), Expect(2) = 6e-034
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -3 / +1
Query: 70 SHVSSIVRGTVGYLDPEY 17
+H S+ V GT+GY+DPEY
Sbjct: 421 THTSTYVMGTIGYIDPEY 474
>gb|DR686689.1|DR686689 EST1076767 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABI76 3' end, mRNA sequence
Length = 737
Score = 129 bits (277), Expect(2) = 6e-034
Identities = 57/130 (43%), Positives = 83/130 (63%)
Frame = -3 / +1
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L + + IA+K L Q +REF E+ + I HR+LV+ GYS N+L Y++M N
Sbjct: 13 LKNCKTIAIKRLYTHHPQSLREFETELETVGSIKHRNLVSLHGYSLSPHGNLLFYDYMVN 192
Query: 295 GTLKEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMR 116
G+L + L G+ + W RL+IA +A+G+ YLH C+P IIHRD+K+SNILLD N
Sbjct: 193 GSLFDILHGSSKKIKIDWNTRLKIALGAAQGLAYLHHDCNPRIIHRDVKTSNILLDDNFE 372
Query: 115 AKVADFGLSK 86
A ++DFG++K
Sbjct: 373 AHLSDFGIAK 402
Score = 35.0 bits (70), Expect(2) = 6e-034
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -3 / +1
Query: 70 SHVSSIVRGTVGYLDPEY 17
+H S+ V GT+GY+DPEY
Sbjct: 421 THTSTYVMGTIGYIDPEY 474
>gb|CO198783.1|CO198783 GEO1_16_B06.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_16_B06_A029 5', mRNA sequence
Length = 791
Score = 75.3 bits (158), Expect(3) = 9e-034
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = -3 / +1
Query: 244 WLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK 86
W R+++A +AKG+EYLH +P +I+RD KSSNILLD+ K++DFGL+K
Sbjct: 520 WNTRMKVAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAK 678
Score = 73.5 bits (154), Expect(3) = 9e-034
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = -3 / +1
Query: 466 GREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTL 287
G+ +AVK L + QG REFL EV +LS +HH +LV +GY + +LVYE+M G+L
Sbjct: 295 GQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSL 474
Query: 286 KEHLRGADNEK 254
++HL +K
Sbjct: 475 EDHLHDVPPDK 507
Score = 33.6 bits (67), Expect(3) = 9e-034
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +1
Query: 85 PAVDGSHVSSIVRGTVGYLDPEY 17
P D +HVS+ V GT GY PEY
Sbjct: 685 PVGDNTHVSTRVMGTYGYCAPEY 753
>dbj|BD267395.1| Compositions isolated from plant cells and utilization of the same in
modifying plant cell signal transduction
Length = 4356
Score = 128 bits (275), Expect(2) = 1e-033
Identities = 56/130 (43%), Positives = 82/130 (63%)
Frame = -3 / +2
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L + + +A+K L Q +REF E+ + I HR+LV+ GYS N+L Y++M N
Sbjct: 2951 LKNCKPVAIKRLYTHYPQSLREFETELETVGSIKHRNLVSLRGYSLSPHGNLLFYDYMVN 3130
Query: 295 GTLKEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMR 116
G+L + L G+ + W RL IA +A+G+ YLH C+P IIHRD+K+SNILLD N
Sbjct: 3131 GSLWDILHGSSKKIKLDWNTRLRIALGAAQGLAYLHHDCNPRIIHRDVKTSNILLDDNFE 3310
Query: 115 AKVADFGLSK 86
A ++DFG++K
Sbjct: 3311 AHLSDFGIAK 3340
Score = 35.0 bits (70), Expect(2) = 1e-033
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -3 / +2
Query: 70 SHVSSIVRGTVGYLDPEY 17
+H S+ V GT+GY+DPEY
Sbjct: 3359 THASTYVMGTIGYIDPEY 3412
>gb|CX647345.1|CX647345 COLD1_15_A11.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_15_A11_A029 5', mRNA sequence
Length = 834
Score = 84.9 bits (179), Expect(2) = 1e-033
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = -3 / +1
Query: 283 EHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVA 104
EH + W RL+IA +A+G+ YLH C P IIHRD+K+SNILLD N AKVA
Sbjct: 643 EHHLHGKGQPTMDWPTRLKIATGAARGLAYLHEDCYPKIIHRDIKASNILLDSNFEAKVA 822
Query: 103 DFGL 92
DFGL
Sbjct: 823 DFGL 834
Score = 79.0 bits (166), Expect(2) = 1e-033
Identities = 34/69 (49%), Positives = 44/69 (63%)
Frame = -3 / +1
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L + IAVK L QG REF EV ++SR+HHRHLV+ +GY + +LVYEF+ N
Sbjct: 454 LPGNKTIAVKQLKVGGSQGEREFQAEVEIISRVHHRHLVSLVGYCIAGSQRLLVYEFVPN 633
Query: 295 GTLKEHLRG 269
TL+ HL G
Sbjct: 634 DTLEHHLHG 660
>gb|CO176663.1|CO176663 NDL1_63_A06.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_63_A06_A029 5', mRNA sequence
Length = 754
Score = 80.8 bits (170), Expect(4) = 1e-033
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = -3 / +3
Query: 265 DNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK 86
D I W RL I + + +G+ YLH C P I+HRD+KSSNILLD+ A +ADFGLS+
Sbjct: 489 DGGSILDWCTRLRIIQGAGRGLAYLHRVCEPHIVHRDIKSSNILLDEKFEAHLADFGLSR 668
Score = 64.8 bits (135), Expect(4) = 1e-033
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = -3 / +3
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
LADG +IA+K LT + Q REF EV LSR H++LV+ GY + +L+Y +M N
Sbjct: 276 LADGTKIAIKRLTGECGQMEREFKAEVEALSRAQHKNLVSLQGYCKYGNDRLLIYSYMEN 455
Query: 295 GTLKEHL 275
+L L
Sbjct: 456 ASLDHWL 476
Score = 29.5 bits (58), Expect(4) = 1e-033
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -3 / +3
Query: 70 SHVSSIVRGTVGYLDPEY 17
+HVS+ + GT+GY+ PEY
Sbjct: 687 THVSTELVGTLGYIPPEY 740
Score = 24.0 bits (46), Expect(4) = 1e-033
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -2 / +2
Query: 515 NWXXRLWHSILWKVG*WERDCS 450
+W RLW I G W ++C+
Sbjct: 236 HWLWRLWIGI*SHSGRWHKNCN 301
>gb|CO363690.1|CO363690 RTK1_11_F05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_11_F05_A029 3', mRNA sequence
Length = 874
Score = 79.4 bits (167), Expect(3) = 4e-033
Identities = 30/53 (56%), Positives = 43/53 (81%)
Frame = -3 / +3
Query: 244 WLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK 86
W +R++IA +AKG+EYLH +P +I+RDLKSSNILLD++ K++DFGL+K
Sbjct: 213 WNRRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEDFHPKLSDFGLAK 371
Score = 68.0 bits (142), Expect(3) = 4e-033
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = -3 / +3
Query: 451 VKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHLR 272
VK L + QG REFL EV +LS +HH +LV +GY + +LVYE+M G+L++HL
Sbjct: 3 VKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLH 182
Query: 271 GADNEK 254
+K
Sbjct: 183 DLSPDK 200
Score = 32.7 bits (65), Expect(3) = 4e-033
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 85 PAVDGSHVSSIVRGTVGYLDPEY 17
P D +HVS+ V GT GY PEY
Sbjct: 378 PVGDKTHVSTRVMGTYGYCAPEY 446
>gb|DR167714.1|DR167714 RTPHOS1_20_C10.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_20_C10_A029 5', mRNA sequence
Length = 762
Score = 70.7 bits (148), Expect(4) = 9e-033
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = -3 / +1
Query: 235 RLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK 86
RL+IA D A G+ YLH IIHRD+KSSNILL + RAKVADFG S+
Sbjct: 361 RLDIAIDVAHGLTYLHLYADQQIIHRDVKSSNILLTETFRAKVADFGFSR 510
Score = 60.2 bits (125), Expect(4) = 9e-033
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = -3 / +1
Query: 412 EFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHLRG 269
EF NEV +L+RI H LV +G +Q+ ++ILV EF+ +GTL+EHL G
Sbjct: 187 EFRNEVGMLARIEHMSLVKLIGVCEQEKEHILVTEFVPHGTLREHLDG 330
Score = 38.2 bits (77), Expect(4) = 9e-033
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -3 / +1
Query: 70 SHVSSIVRGTVGYLDPEYL 14
+H+S+ V+GT GYLDPEYL
Sbjct: 535 THISTQVKGTAGYLDPEYL 591
Score = 27.2 bits (53), Expect(4) = 9e-033
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2 / +3
Query: 518 KNWXXRLWHSILWKVG*WERDCSQTSHE 435
K+W +W+S+ G*W C TS E
Sbjct: 75 KDWSRGIWNSL*RSAG*WPSCCY*TS*E 158
>gb|CX651917.1|CX651917 COLD1_55_E03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_55_E03_A029 5', mRNA sequence
Length = 797
Score = 70.7 bits (148), Expect(4) = 1e-032
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = -3 / +2
Query: 235 RLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK 86
RL+IA D A G+ YLH IIHRD+KSSNILL + RAKVADFG S+
Sbjct: 503 RLDIAIDVAHGLTYLHLYADQQIIHRDVKSSNILLTETFRAKVADFGFSR 652
Score = 62.5 bits (130), Expect(4) = 1e-032
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = -3 / +2
Query: 412 EFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHLRG 269
EF NEV +L+RI H LV +G +Q+ ++ILV EF+ NGTL+EHL G
Sbjct: 329 EFRNEVGMLARIEHMSLVKLIGVCEQEKEHILVTEFVPNGTLREHLDG 472
Score = 35.4 bits (71), Expect(4) = 1e-032
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -3 / +2
Query: 70 SHVSSIVRGTVGYLDPEYL 14
+H+S+ V+GT YLDPEYL
Sbjct: 677 THISTQVKGTASYLDPEYL 733
Score = 27.2 bits (53), Expect(4) = 1e-032
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2 / +1
Query: 518 KNWXXRLWHSILWKVG*WERDCSQTSHE 435
K+W +W+S+ G*W C TS E
Sbjct: 217 KDWSRGIWNSL*RSAG*WPSCCY*TS*E 300
>gb|DR089413.1|DR089413 RTAL1_8_B10.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_8_B10_A029 5', mRNA sequence
Length = 762
Score = 96.4 bits (204), Expect(4) = 2e-032
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = -3 / +1
Query: 286 KEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKV 107
K H + W RL IA + A+G+E++H GC+P IIHRD+K++NILLD NM AK+
Sbjct: 409 KLHGKDVSGHSNLDWKTRLNIALNVAQGLEFMHAGCTPKIIHRDVKTANILLDNNMNAKL 588
Query: 106 ADFGLSKPAVDG 71
ADFG+SK A+DG
Sbjct: 589 ADFGISKIAMDG 624
Score = 46.4 bits (95), Expect(4) = 2e-032
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = -3 / +1
Query: 427 YQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHLRGAD 263
+ I +FLNE +L + +++L+ GY + +L+YE M G+L + L G D
Sbjct: 262 FSTIPQFLNEADVLPKAQNKNLMPLHGYCNESKNPMLIYEHMSGGSLSDKLHGKD 426
Score = 26.7 bits (52), Expect(4) = 2e-032
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2 / +3
Query: 530 QI*EKNWXXRLWHSILWKVG*WER 459
++* +NW L I W V WER
Sbjct: 174 KL*SRNWTRELGKGIPW*VAGWER 245
Score = 25.8 bits (50), Expect(4) = 2e-032
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3 / +1
Query: 61 SSIVRGTVGYLDPEYL 14
+++ +GT GY+ PEYL
Sbjct: 643 TAMAKGTPGYIAPEYL 690
>gb|CF670687.1|CF670687 RTCNT1_51_H04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_51_H04_A029 5', mRNA sequence
Length = 705
Score = 96.4 bits (204), Expect(4) = 2e-032
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = -3 / +1
Query: 286 KEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKV 107
K H + W RL IA + A+G+E++H GC+P IIHRD+K++NILLD NM AK+
Sbjct: 283 KLHGKDVSGHSNLDWKTRLNIALNVAQGLEFMHAGCTPKIIHRDVKTANILLDNNMNAKL 462
Query: 106 ADFGLSKPAVDG 71
ADFG+SK A+DG
Sbjct: 463 ADFGISKIAMDG 498
Score = 46.4 bits (95), Expect(4) = 2e-032
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = -3 / +1
Query: 427 YQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHLRGAD 263
+ I +FLNE +L + +++L+ GY + +L+YE M G+L + L G D
Sbjct: 136 FSTIPQFLNEADVLPKAQNKNLMPLHGYCNESKNPMLIYEHMSGGSLSDKLHGKD 300
Score = 26.7 bits (52), Expect(4) = 2e-032
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2 / +3
Query: 530 QI*EKNWXXRLWHSILWKVG*WER 459
++* +NW L I W V WER
Sbjct: 48 KL*SRNWTRELGKGIPW*VAGWER 119
Score = 25.8 bits (50), Expect(4) = 2e-032
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3 / +1
Query: 61 SSIVRGTVGYLDPEYL 14
+++ +GT GY+ PEYL
Sbjct: 517 TAMAKGTPGYIAPEYL 564
>dbj|BD267201.1| Compositions isolated from plant cells and utilization of the same
in modifying plant cell signal transduction
Length = 1128
Score = 75.3 bits (158), Expect(3) = 2e-032
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = -3 / +2
Query: 244 WLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK 86
W +R EI +A+G+ YLH IIHRD+K+SNILLDKN + K+ADFGL+K
Sbjct: 596 WRERYEIIVGTARGLAYLHEESDIRIIHRDIKASNILLDKNYKPKIADFGLAK 754
Score = 73.5 bits (154), Expect(3) = 2e-032
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = -3 / +1
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L DG+E+AVK L S QG EFLNE ++SR+ HR+LV LG + + +LVYE++ N
Sbjct: 256 LRDGQEVAVKRLKKGSSQGDGEFLNEANVISRVQHRNLVKLLGCCVESSERLLVYEYLEN 435
Query: 295 GTLKEHLRG 269
+L + G
Sbjct: 436 SSLDRIIFG 462
Score = 33.1 bits (66), Expect(3) = 2e-032
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3 / +2
Query: 76 DGSHVSSIVRGTVGYLDPEY 17
D SHVS+ + GT GY+ PEY
Sbjct: 767 DKSHVSTRIAGTFGYMAPEY 826
>gb|BQ701720.1|BQ701720 NXSI_118_G12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_118_G12 5' similar to Arabidopsis thaliana
sequence At4g23180 receptor-like protein kinase 4 (RLK4)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 547
Score = 129 bits (277), Expect(2) = 2e-032
Identities = 57/129 (44%), Positives = 82/129 (63%)
Frame = -3 / +3
Query: 472 ADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNG 293
+DG EIAVK L+ S QG EF+NEV L+++I HR+LV LG + + +LVYE++ N
Sbjct: 72 SDGTEIAVKKLSLRSGQGTEEFMNEVKLVAKIQHRNLVQLLGCCVEGPERLLVYEYLPNR 251
Query: 292 TLKEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRA 113
+L L + ++ W KR I A+G+ YLH IIHRD+K++NILLD +
Sbjct: 252 SLDTFLFNPERRQVLDWQKRHNIIMGIARGLLYLHEDSQLRIIHRDVKTNNILLDDRLNP 431
Query: 112 KVADFGLSK 86
K+ADFGL++
Sbjct: 432 KIADFGLAR 458
Score = 29.9 bits (59), Expect(2) = 2e-032
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3 / +3
Query: 76 DGSHVSSIVRGTVGYLDPEY 17
D +HV + V GT GY+ PEY
Sbjct: 471 DETHVHTRVAGTYGYMAPEY 530
>gb|CO361752.1|CO361752 NDL2_6_G07.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_6_G07_A029 5', mRNA sequence
Length = 794
Score = 75.3 bits (158), Expect(3) = 2e-032
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = -3 / +2
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L+DGRE+AVK L S QG EF NE L+SR+ HR+LV +G S + + +LVYE++ N
Sbjct: 212 LSDGREVAVKRLKIGSRQGDVEFFNEANLISRVQHRNLVKMIGCSVESSERLLVYEYLQN 391
Query: 295 GTLKEHLRG 269
+L + G
Sbjct: 392 SSLDRIIFG 418
Score = 69.8 bits (146), Expect(3) = 2e-032
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -3 / +1
Query: 253 ITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK 86
+ W R EI +A+G+ YLH IIHRD+K+SN+LLD R K+ADFGL+K
Sbjct: 544 LLDWQARYEIIVGTARGLAYLHEESEIRIIHRDIKASNVLLDNKDRPKIADFGLAK 711
Score = 35.4 bits (71), Expect(3) = 2e-032
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -3 / +1
Query: 82 AVDGSHVSSIVRGTVGYLDPEY 17
A D SHVS+ V GT+GY+ PEY
Sbjct: 718 AEDESHVSTRVAGTLGYMAPEY 783
>gb|DR177846.1|DR177846 RTMNUT1_7_F04.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_7_F04_A029 5', mRNA sequence
Length = 822
Score = 99.1 bits (210), Expect(3) = 5e-032
Identities = 40/86 (46%), Positives = 56/86 (65%)
Frame = -3 / +3
Query: 328 KNILVYEFMHNGTLKEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLK 149
+ L+Y++M NG+L +HL G ++ SW +R I +AKG+ YLH P I HRD+K
Sbjct: 372 QRFLIYDYMPNGSLDDHLFGRKSKDSLSWTQRKNIVMGTAKGLAYLHGSVQPPIYHRDIK 551
Query: 148 SSNILLDKNMRAKVADFGLSKPAVDG 71
+NILLD M A V+DFGL+K V+G
Sbjct: 552 PANILLDGEMNACVSDFGLAKKLVEG 629
Score = 48.3 bits (99), Expect(3) = 5e-032
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = -3 / +3
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLG 347
L +G+ +AVK + N S +G EFLNEV +++ I HR+LV G
Sbjct: 210 LLNGQPVAVKCIRNCSAEGDAEFLNEVEIINHIRHRNLVALKG 338
Score = 29.0 bits (57), Expect(3) = 5e-032
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3 / +3
Query: 70 SHVSSIVRGTVGYLDPEY 17
SH+++ V GT GYL PEY
Sbjct: 633 SHMTTKVAGTHGYLAPEY 686
>dbj|BD267163.1| Compositions isolated from plant cells and utilization of the same
in modifying plant cell signal transduction
Length = 551
Score = 133 bits (286), Expect(2) = 1e-031
Identities = 59/130 (45%), Positives = 84/130 (64%)
Frame = -3 / +1
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
LADGREIAVK L+ S QG EF+NEV ++++I HR+LV LG + +LVYE+M N
Sbjct: 70 LADGREIAVKKLSVKSKQGKTEFMNEVKIVAKIQHRNLVKLLGCCAAGMEKLLVYEYMPN 249
Query: 295 GTLKEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMR 116
+L + L + +I W KR I A+G+ YLH P IIHRD+K+ NILL + +
Sbjct: 250 NSLDKILFDPERCRILDWQKRYNIILGVARGLLYLHEDSQPRIIHRDIKAGNILLAQTLN 429
Query: 115 AKVADFGLSK 86
K++DFG+++
Sbjct: 430 PKISDFGMAR 459
Score = 23.5 bits (45), Expect(2) = 1e-031
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3 / +1
Query: 76 DGSHVSSIVRGTVGYLDPEY 17
+ + + + + GT GY+ PEY
Sbjct: 472 NNTQLKTRIAGTYGYMAPEY 531
>gb|DR693676.1|DR693676 EST1083765 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE274 3' end, mRNA sequence
Length = 779
Score = 116 bits (249), Expect(2) = 1e-031
Identities = 49/111 (44%), Positives = 74/111 (66%)
Frame = -3 / +1
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L +G +IAVK+LT S QG+++FLNE+ +LSR+ H +LV+ L Y + + ++YE M
Sbjct: 184 LPEGLDIAVKVLTLFSTQGVKQFLNEIDVLSRVQHENLVSLLWYCNESQELTIIYEHMSG 363
Query: 295 GTLKEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSS 143
G+L++ L G D SW R++IA D+A+G+EYLHT C+P + KSS
Sbjct: 364 GSLRDRLYGPDASSEISWKTRVKIALDAAQGLEYLHTVCTPKNYSQGSKSS 516
Score = 40.0 bits (81), Expect(2) = 1e-031
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = -3 / +2
Query: 82 AVDGSHVSSIVRGTVGYLDPEY 17
A + SHV+++V+GT GYLDPEY
Sbjct: 584 AGEASHVTTMVKGTAGYLDPEY 649
>gb|DT638410.1|DT638410 EST1153341 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHE78 3' end, mRNA sequence
Length = 770
Score = 79.9 bits (168), Expect(3) = 2e-031
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = -3 / +2
Query: 247 SWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK 86
+W R++I +AKG+ YLH G P ++HRD+KSSNILLDK AKV+DFGL+K
Sbjct: 344 TWEIRMKIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKQWNAKVSDFGLAK 505
Score = 67.5 bits (141), Expect(3) = 2e-031
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = -3 / +2
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L +G +AVK L N+ Q +EF EV + R+ H++LV LGY + +LVYEF+ N
Sbjct: 113 LPNGNPVAVKNLLNNRGQAEKEFRVEVEAIGRVRHKNLVRLLGYCAEGAGRMLVYEFVDN 292
Query: 295 GTLKEHLRG 269
G L++ L G
Sbjct: 293 GNLEQWLHG 319
Score = 27.2 bits (53), Expect(3) = 2e-031
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3 / +2
Query: 70 SHVSSIVRGTVGYLDPEY 17
S+V++ V GT GY+ PEY
Sbjct: 524 SYVTTRVMGTFGYVAPEY 577
>gb|CX653278.1|CX653278 COLD1_64_C07.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_64_C07_A029 5', mRNA sequence
Length = 755
Score = 79.9 bits (168), Expect(3) = 2e-031
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = -3 / +2
Query: 247 SWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK 86
+W R++I +AKG+ YLH G P ++HRD+KSSNILLDK AKV+DFGL+K
Sbjct: 311 TWEIRMKIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKQWNAKVSDFGLAK 472
Score = 67.5 bits (141), Expect(3) = 2e-031
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = -3 / +2
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L +G +AVK L N+ Q +EF EV + R+ H++LV LGY + +LVYEF+ N
Sbjct: 80 LPNGNPVAVKNLLNNRGQAEKEFRVEVEAIGRVRHKNLVRLLGYCAEGAGRMLVYEFVDN 259
Query: 295 GTLKEHLRG 269
G L++ L G
Sbjct: 260 GNLEQWLHG 286
Score = 27.2 bits (53), Expect(3) = 2e-031
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3 / +2
Query: 70 SHVSSIVRGTVGYLDPEY 17
S+V++ V GT GY+ PEY
Sbjct: 491 SYVTTRVMGTFGYVAPEY 544
>gb|DR693856.1|DR693856 EST1083946 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE509 3' end, mRNA sequence
Length = 727
Score = 79.9 bits (168), Expect(3) = 2e-031
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = -3 / +3
Query: 247 SWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK 86
+W R++I +AKG+ YLH G P ++HRD+KSSNILLDK AKV+DFGL+K
Sbjct: 336 TWEIRMKIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKQWNAKVSDFGLAK 497
Score = 67.5 bits (141), Expect(3) = 2e-031
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = -3 / +3
Query: 475 LADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHN 296
L +G +AVK L N+ Q +EF EV + R+ H++LV LGY + +LVYEF+ N
Sbjct: 105 LPNGNPVAVKNLLNNRGQAEKEFRVEVEAIGRVRHKNLVRLLGYCAEGAGRMLVYEFVDN 284
Query: 295 GTLKEHLRG 269
G L++ L G
Sbjct: 285 GNLEQWLHG 311
Score = 27.2 bits (53), Expect(3) = 2e-031
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3 / +3
Query: 70 SHVSSIVRGTVGYLDPEY 17
S+V++ V GT GY+ PEY
Sbjct: 516 SYVTTRVMGTFGYVAPEY 569
>dbj|BD267183.1| Compositions isolated from plant cells and utilization of the same
in modifying plant cell signal transduction
Length = 483
Score = 81.3 bits (171), Expect(3) = 2e-031
Identities = 29/54 (53%), Positives = 44/54 (81%)
Frame = -3 / +1
Query: 247 SWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK 86
+W R +IA+ +A+G+ +LH C P IIHRD+KSSN+LLD+NM A+V+DFG+++
Sbjct: 229 TWEVRKQIAKGAARGLAFLHHNCIPHIIHRDMKSSNVLLDRNMEARVSDFGMAR 390
Score = 69.3 bits (145), Expect(3) = 2e-031
Identities = 30/67 (44%), Positives = 43/67 (64%)
Frame = -3 / +1
Query: 469 DGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGT 290
DG +A+K L S QG REF+ E+ L +I HR+LV LGY + + +LVYE+M G+
Sbjct: 1 DGSNVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMQFGS 180
Query: 289 LKEHLRG 269
L++ L G
Sbjct: 181 LEDMLHG 201
Score = 23.5 bits (45), Expect(3) = 2e-031
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3 / +1
Query: 82 AVDGSHVSSIVRGTVGYLDPEY 17
A+D S + GT GY+ PEY
Sbjct: 400 ALDTHLSVSTLAGTPGYVPPEY 465
>gb|CF672191.1|CF672191 RTCNT1_62_A10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_62_A10_A029 3', mRNA sequence
Length = 751
Score = 95.0 bits (201), Expect(4) = 4e-031
Identities = 36/58 (62%), Positives = 48/58 (82%)
Frame = -3 / +2
Query: 244 WLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSKPAVDG 71
W RL IA + A+G+E++H GC+P IIHRD+K++NILLD NM AK+ADFG+SK A+DG
Sbjct: 227 WKTRLNIALNVAQGLEFMHAGCTPKIIHRDVKTANILLDNNMNAKLADFGISKIAMDG 400
Score = 48.3 bits (99), Expect(4) = 4e-031
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = -3 / +2
Query: 427 YQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHLRGA 266
+ +FLNE +LSR +++L+ GY ++ +L+YE M G+L ++L GA
Sbjct: 41 FSTFHQFLNEADVLSRAQNKNLMPLHGYCREPKCPMLIYEHMSRGSLSDNLHGA 202
Score = 24.9 bits (48), Expect(4) = 4e-031
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = -3 / +2
Query: 61 SSIVRGTVGYLDPEYL 14
+++ +GT GY+ PEY+
Sbjct: 419 TAMAKGTPGYIAPEYI 466
Score = 22.6 bits (43), Expect(4) = 4e-031
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / +2
Query: 475 LADGREIAVKLLT 437
L DGR++AVKL +
Sbjct: 8 LRDGRDVAVKLFS 46
>gb|CF670461.1|CF670461 RTCNT1_50_H04.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_50_H04_A029 3', mRNA sequence
Length = 677
Score = 95.0 bits (201), Expect(4) = 4e-031
Identities = 36/58 (62%), Positives = 48/58 (82%)
Frame = -3 / +1
Query: 244 WLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSKPAVDG 71
W RL IA + A+G+E++H GC+P IIHRD+K++NILLD NM AK+ADFG+SK A+DG
Sbjct: 214 WKTRLNIALNVAQGLEFMHAGCTPKIIHRDVKTANILLDNNMNAKLADFGISKIAMDG 387
Score = 48.3 bits (99), Expect(4) = 4e-031
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = -3 / +1
Query: 427 YQGIREFLNEVTLLSRIHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHLRGADN 260
+ +FLNE +LSR +++L+ GY ++ +L+YE M G+L ++L G N
Sbjct: 40 FSTFHQFLNEADVLSRAQNKNLMPLHGYCREPKCPMLIYEHMSRGSLSDNLHGHSN 207
Score = 24.9 bits (48), Expect(4) = 4e-031
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = -3 / +1
Query: 61 SSIVRGTVGYLDPEYL 14
+++ +GT GY+ PEY+
Sbjct: 406 TAMAKGTPGYIAPEYI 453
Score = 22.6 bits (43), Expect(4) = 4e-031
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / +1
Query: 475 LADGREIAVKLLT 437
L DGR++AVKL +
Sbjct: 7 LRDGRDVAVKLFS 45
>gb|BE762255.1|BE762255 NXCI_067_C04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_067_C04 5' similar to Arabidopsis
thaliana sequence At2g37050 putative receptor-like
protein kinase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 261
Score = 82.2 bits (173), Expect(2) = 5e-031
Identities = 34/48 (70%), Positives = 37/48 (77%)
Frame = -3 / +2
Query: 268 ADNEKITSWLKRLEIAEDSAKGIEYLHTGCSPTIIHRDLKSSNILLDK 125
A EK W+ RL IAED+A GIEYLH GC+ IIHRDLKSSNILLDK
Sbjct: 116 AGEEKHLDWITRLXIAEDAAXGIEYLHAGCNXXIIHRDLKSSNILLDK 259
Score = 72.1 bits (151), Expect(2) = 5e-031
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = -3 / +2
Query: 379 IHHRHLVTFLGYSQQDGKNILVYEFMHNGTLKEHLRGADNEK 254
IHHR+LV GY Q G NILVYE+MHNGTL+EHL G E+
Sbjct: 2 IHHRNLVALFGYCQDQGTNILVYEYMHNGTLREHLHGPAGEE 127
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 286,422,535
Number of Sequences: 355925
Number of extensions: 3926679
Number of successful extensions: 34400
Number of sequences better than 1.0e-020: 279
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 9381670230
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)