TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QCA10g02.yg.2.1
         (277 letters)

Database: Pinus_nucl_with_EST.fasta 
           355,925 sequences; 217,277,237 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|AJ309090.1|PPI309090  Pinus pinaster partial mRNA for pu...   125   4e-046

>emb|AJ309090.1|PPI309090 Pinus pinaster partial mRNA for putative sucrose-phosphate synthase
          Length = 545

 Score =  125 bits (267), Expect(2) = 4e-046
 Identities = 47/61 (77%), Positives = 52/61 (85%)
 Frame = -3 / +2

                                                                       
Query: 185 DGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGR 6
           DG G GES+GAYI+RIPCGPRDKY+ KE LWPY+QEFVDGAL HILNMSK LG+Q G G 
Sbjct: 146 DGHGGGESSGAYIIRIPCGPRDKYIPKELLWPYIQEFVDGALGHILNMSKVLGDQAGKGD 325

            
Query: 5   P 3
           P
Sbjct: 326 P 328




 Score = 77.6 bits (163), Expect(2) = 4e-046
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = -3 / +2

                                               
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMG 168
           RVDL TRQ+SSPDVDWSYGEPTEMLCSGS D +G G
Sbjct: 50  RVDLLTRQISSPDVDWSYGEPTEMLCSGSYDVDGHG 157



  Database: Pinus_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:45 PM
  Number of letters in database: 217,277,237
  Number of sequences in database:  355,925
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 176,376,406
Number of Sequences: 355925
Number of extensions: 2547183
Number of successful extensions: 212494
Number of sequences better than 1.0e-020: 1
length of database: 72,425,745
effective HSP length: 48
effective length of database: 55,341,345
effective search space used: 2379677835
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)