TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.068P15F020924.3.1
(625 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX254061.1|BX254061 BX254061 Pinus pinaster differenciat... 244 3e-064
gb|CF390060.1|CF390060 RTDR2_12_A06.b1_A021 Loblolly pine r... 244 3e-064
gb|CF477126.1|CF477126 RTWW3_5_G08.g1_A022 Well-watered lob... 244 3e-064
gb|DR079462.1|DR079462 RTFEPL1_11_A03.g1_A029 Roots plus ad... 244 3e-064
gb|DR094118.1|DR094118 STRR1_12_C07.g1_A033 Stem Response R... 244 3e-064
gb|CF478049.1|CF478049 RTWW3_17_E06.g1_A022 Well-watered lo... 137 4e-060
gb|BX254250.1|BX254250 BX254250 Pinus pinaster differenciat... 223 7e-058
gb|AY608411.1| Pinus taeda nodulin-like protein 5NG4 mRNA, ... 209 1e-053
gb|DR110236.1|DR110236 RTS1_9_E09.g1_A029 Roots minus sulfu... 162 2e-039
gb|CF470628.1|CF470628 RTDS1_13_E12.g1_A015 Drought-stresse... 160 8e-039
gb|DR120323.1|DR120323 RTMG1_29_A06.b1_A029 Roots minus mag... 160 8e-039
gb|CF390662.1|CF390662 RTDR2_20_D03.g1_A021 Loblolly pine r... 160 1e-038
gb|CF476506.1|CF476506 RTWW3_1_C09.g1_A022 Well-watered lob... 160 1e-038
gb|CO367342.1|CO367342 RTK1_33_E12.g1_A029 Roots minus pota... 160 1e-038
gb|CO367804.1|CO367804 RTK1_36_F02.g1_A029 Roots minus pota... 160 1e-038
gb|DR687035.1|DR687035 EST1077113 Normalized pine embryo li... 159 2e-038
gb|CF474025.1|CF474025 RTWW2_18_D06.b1_A021 Well-watered lo... 158 3e-038
gb|DR167860.1|DR167860 RTPHOS1_21_D01.g1_A029 Roots minus p... 158 3e-038
gb|DR384632.1|DR384632 RTHG1_3_B11.g1_A029 Roots plus added... 158 3e-038
gb|CO171061.1|CO171061 NDL1_18_F06.g1_A029 Needles control ... 156 1e-037
gb|DR092668.1|DR092668 STRR1_2_H07.g1_A033 Stem Response Re... 156 1e-037
gb|CF392847.1|CF392847 RTDR3_19_G07.g1_A022 Loblolly pine r... 156 1e-037
gb|CO197528.1|CO197528 GEO1_7_D07.b1_A029 Root gravitropism... 156 1e-037
gb|CO363787.1|CO363787 RTK1_11_G02.g1_A029 Roots minus pota... 156 1e-037
gb|DR025171.1|DR025171 STRS1_70_C04.b1_A034 Shoot tip pitch... 156 1e-037
gb|DR071708.1|DR071708 RTDK1_21_D03.g1_A029 Roots, dark Pin... 156 1e-037
gb|DR682638.1|DR682638 EST1072713 Normalized pine embryo li... 156 1e-037
gb|BX250922.1|BX250922 BX250922 Pinus pinaster differenciat... 154 5e-037
gb|BX784100.1|BX784100 BX784100 Pinus pinaster differenciat... 154 5e-037
gb|CO167692.1|CO167692 FLD1_70_C03.g1_A029 Root flooded Pin... 154 7e-037
gb|CF387362.1|CF387362 RTDR1_12_G11.g1_A015 Loblolly pine r... 152 2e-036
gb|CF471103.1|CF471103 RTDS1_16_C03.g1_A015 Drought-stresse... 152 2e-036
gb|CV031904.1|CV031904 RTNACL1_4_B04.g1_A029 Roots plus add... 152 2e-036
gb|CV032789.1|CV032789 RTNACL1_18_H01.b1_A029 Roots plus ad... 152 2e-036
gb|DT625230.1|DT625230 EST1159505 Sequencing ESTs from lobl... 152 2e-036
gb|CX648371.1|CX648371 COLD1_28_F03.b1_A029 Root cold Pinus... 151 3e-036
gb|DR385454.1|DR385454 RTHG1_8_F06.g1_A029 Roots plus added... 151 3e-036
gb|CO166712.1|CO166712 FLD1_64_A09.b1_A029 Root flooded Pin... 149 1e-035
gb|BQ696558.1|BQ696558 NXPV_042_F03_F NXPV (Nsf Xylem Plani... 147 6e-035
gb|DR091559.1|DR091559 RTAL1_22_A11.g1_A029 Roots plus adde... 146 2e-034
gb|DN450504.1|DN450504 EST946303 Sequencing ESTs from loblo... 137 6e-032
gb|DR384820.1|DR384820 RTHG1_4_F11.g1_A029 Roots plus added... 137 6e-032
gb|DR078570.1|DR078570 RTFEPL1_5_C05.g1_A029 Roots plus add... 134 6e-031
gb|BG485740.1|BG485740 NXPV_038_C08_F NXPV (Nsf Xylem Plani... 133 2e-030
gb|BG485786.1|BG485786 NXPV_038_G10_F NXPV (Nsf Xylem Plani... 132 2e-030
gb|DT631215.1|DT631215 EST1146146 Normalized pine embryo li... 130 7e-030
gb|CV033929.1|CV033929 RTNACL1_37_B03.g1_A029 Roots plus ad... 84 1e-027
gb|CO369832.1|CO369832 RTK1_54_A12.g1_A029 Roots minus pota... 122 2e-027
gb|AA557006.1|AA557006 848 Loblolly pine N Pinus taeda cDNA... 96 4e-027
gb|BX680621.1|BX680621 BX680621 RS Pinus pinaster cDNA clon... 120 1e-026
gb|BG318327.1|BG318327 NXPV_012_C10_F NXPV (Nsf Xylem Plani... 119 2e-026
gb|BM158786.1|BM158786 NXLV_038_D04_F NXLV (Nsf Xylem Late ... 116 1e-025
gb|DR692596.1|DR692596 EST1082684 Normalized pine embryo li... 115 4e-025
gb|DR078785.1|DR078785 RTFEPL1_6_G09.g1_A029 Roots plus add... 87 8e-025
gb|CO363075.1|CO363075 RTK1_7_B06.g1_A029 Roots minus potas... 111 5e-024
gb|CF398243.1|CF398243 RTDS3_24_B05.b1_A022 Drought-stresse... 111 6e-024
gb|CF399047.1|CF399047 RTDS3_9_G06.b1_A022 Drought-stressed... 111 6e-024
gb|BQ695720.1|BQ695720 NXPV_031_H12_F NXPV (Nsf Xylem Plani... 110 9e-024
gb|DR112232.1|DR112232 RTS1_26_F04.g1_A029 Roots minus sulf... 68 9e-024
gb|CF399147.1|CF399147 RTDS3_9_G06.g1_A022 Drought-stressed... 106 1e-022
gb|CF398276.1|CF398276 RTDS3_24_B05.g1_A022 Drought-stresse... 101 5e-021
>gb|BX254061.1|BX254061 BX254061 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP092G08, mRNA sequence
Length = 682
Score = 244 bits (528), Expect = 3e-064
Identities = 101/132 (76%), Positives = 118/132 (89%)
Frame = +1 / +2
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
HIVSRAALNMGIS+IVF +YRN+I+L LL P AYFLEKK+RPPLT S LV+FFLLALCGI
Sbjct: 206 HIVSRAALNMGISKIVFPIYRNIIALLLLGPAAYFLEKKERPPLTLSFLVQFFLLALCGI 385
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
TANQGFYLLGLY+ +PT+ASAIQN+VPAITF+MAA+L LE+V + R GLAK+VGTV +
Sbjct: 386 TANQGFYLLGLYYTTPTFASAIQNSVPAITFIMAAILGLEEVHIRRLDGLAKIVGTVACV 565
Query: 559 GGATVITLYKGP 594
GGAT+ITLYKGP
Sbjct: 566 GGATIITLYKGP 601
Score = 175 bits (376), Expect = 3e-043
Identities = 88/152 (57%), Positives = 99/152 (65%)
Frame = -3 / -2
Query: 593 GPLYRVMTVAPPMLTTVPTTLAXXXXXXXXXXXXXXTAAMTKVIAGTVFCIAEA*VGDR* 414
GPL RV+ VAPP TVPT LA AAM KVIAGT FC+A+A VG *
Sbjct: 600 GPL*RVIIVAPPTQATVPTILANPSSLLMWTSSSPRIAAMIKVIAGTEFCMADANVGVV* 421
Query: 413 YRPRR*KPWFAVIPHSASRKNSTSKEKVSGGLSFFSRK*ANGASKAREMRFLYTMNTISL 234
Y+P R* P FAVIPH+ASRKN T E+VSGG SFFSRK*A G S + M FL TI L
Sbjct: 420 YKPSR*NP*FAVIPHNASRKN*TRNERVSGGRSFFSRK*AAGPSSSNAMMFL*IGKTILL 241
Query: 233 MPMLSAALETMWNPARRNCRASTPTSSFSFSG 138
+PMLSAAL+T+ NPA NC AS SF+ SG
Sbjct: 240 IPMLSAALDTI*NPA*PNCSASMAACSFTLSG 145
>gb|CF390060.1|CF390060 RTDR2_12_A06.b1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_12_A06_A021 3', mRNA
sequence
Length = 668
Score = 244 bits (528), Expect = 3e-064
Identities = 101/132 (76%), Positives = 118/132 (89%)
Frame = +1 / -2
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
HIVSRAALNMGIS+IVF +YRN+I+L LL P AYFLEKK+RPPLT S LV+FFLLALCGI
Sbjct: 631 HIVSRAALNMGISKIVFPIYRNIIALLLLGPAAYFLEKKERPPLTLSFLVQFFLLALCGI 452
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
TANQGFYLLGLY+ +PT+ASAIQN+VPAITF+MAA+L LE+V + R GLAK+VGTV +
Sbjct: 451 TANQGFYLLGLYYTTPTFASAIQNSVPAITFIMAAILGLEEVHIRRLDGLAKIVGTVACV 272
Query: 559 GGATVITLYKGP 594
GGAT+ITLYKGP
Sbjct: 271 GGATIITLYKGP 236
Score = 166 bits (358), Expect = 9e-041
Identities = 84/142 (59%), Positives = 94/142 (66%)
Frame = -3 / +3
Query: 593 GPLYRVMTVAPPMLTTVPTTLAXXXXXXXXXXXXXXTAAMTKVIAGTVFCIAEA*VGDR* 414
GPL RV+ VAPP TVPT LA AAM KVIAGT FC+A+A VG *
Sbjct: 237 GPL*RVIIVAPPTQATVPTILANPSSLLMWTSSSPRIAAMIKVIAGTEFCMADANVGVV* 416
Query: 413 YRPRR*KPWFAVIPHSASRKNSTSKEKVSGGLSFFSRK*ANGASKAREMRFLYTMNTISL 234
Y+P R* P FAVIPH+ASRKN T E+VSGG SFFSRK*A G S + M FL TI L
Sbjct: 417 YKPSR*NP*FAVIPHNASRKN*TRNERVSGGRSFFSRK*AAGPSSSNAMMFL*IGKTILL 596
Query: 233 MPMLSAALETMWNPARRNCRAS 168
+PMLSAAL+T+ NPA NC AS
Sbjct: 597 IPMLSAALDTI*NPA*PNCSAS 662
>gb|CF477126.1|CF477126 RTWW3_5_G08.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_5_G08_A022 5', mRNA sequence
Length = 735
Score = 244 bits (528), Expect = 3e-064
Identities = 101/132 (76%), Positives = 118/132 (89%)
Frame = +1 / +1
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
HIVSRAALNMGIS+IVF +YRN+I+L LL P AYFLEKK+RPPLT S LV+FFLLALCGI
Sbjct: 184 HIVSRAALNMGISKIVFPIYRNIIALLLLGPAAYFLEKKERPPLTLSFLVQFFLLALCGI 363
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
TANQGFYLLGLY+ +PT+ASAIQN+VPAITF+MAA+L LE+V + R GLAK+VGTV +
Sbjct: 364 TANQGFYLLGLYYTTPTFASAIQNSVPAITFIMAAILGLEEVHIRRLDGLAKIVGTVACV 543
Query: 559 GGATVITLYKGP 594
GGAT+ITLYKGP
Sbjct: 544 GGATIITLYKGP 579
Score = 177 bits (381), Expect = 6e-044
Identities = 89/152 (58%), Positives = 100/152 (65%)
Frame = -3 / -2
Query: 593 GPLYRVMTVAPPMLTTVPTTLAXXXXXXXXXXXXXXTAAMTKVIAGTVFCIAEA*VGDR* 414
GPL RV+ VAPP TVPT LA AAM KVIAGT FC+A+A VG *
Sbjct: 578 GPL*RVIIVAPPTQATVPTILANPSSLLMWTSSSPRIAAMIKVIAGTEFCMADANVGVV* 399
Query: 413 YRPRR*KPWFAVIPHSASRKNSTSKEKVSGGLSFFSRK*ANGASKAREMRFLYTMNTISL 234
Y+P R* P FAVIPH+ASRKN T E+VSGG SFFSRK*A G S + M FL TI L
Sbjct: 398 YKPSR*NP*FAVIPHNASRKN*TRNERVSGGRSFFSRK*AAGPSSSNAMMFL*IGKTILL 219
Query: 233 MPMLSAALETMWNPARRNCRASTPTSSFSFSG 138
+PMLSAAL+T+ NPA NC AS T SF+ SG
Sbjct: 218 IPMLSAALDTI*NPA*PNCSASMATCSFTLSG 123
>gb|DR079462.1|DR079462 RTFEPL1_11_A03.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_11_A03_A029 5', mRNA sequence
Length = 843
Score = 244 bits (528), Expect = 3e-064
Identities = 101/132 (76%), Positives = 118/132 (89%)
Frame = +1 / +3
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
HIVSRAALNMGIS+IVF +YRN+I+L LL P AYFLEKK+RPPLT S LV+FFLLALCGI
Sbjct: 162 HIVSRAALNMGISKIVFPIYRNIIALLLLGPAAYFLEKKERPPLTLSFLVQFFLLALCGI 341
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
TANQGFYLLGLY+ +PT+ASAIQN+VPAITF+MAA+L LE+V + R GLAK+VGTV +
Sbjct: 342 TANQGFYLLGLYYTTPTFASAIQNSVPAITFIMAAILGLEEVHIRRLDGLAKIVGTVACV 521
Query: 559 GGATVITLYKGP 594
GGAT+ITLYKGP
Sbjct: 522 GGATIITLYKGP 557
Score = 177 bits (381), Expect = 6e-044
Identities = 89/152 (58%), Positives = 100/152 (65%)
Frame = -3 / -3
Query: 593 GPLYRVMTVAPPMLTTVPTTLAXXXXXXXXXXXXXXTAAMTKVIAGTVFCIAEA*VGDR* 414
GPL RV+ VAPP TVPT LA AAM KVIAGT FC+A+A VG *
Sbjct: 556 GPL*RVIIVAPPTQATVPTILANPSSLLMWTSSSPRIAAMIKVIAGTEFCMADANVGVV* 377
Query: 413 YRPRR*KPWFAVIPHSASRKNSTSKEKVSGGLSFFSRK*ANGASKAREMRFLYTMNTISL 234
Y+P R* P FAVIPH+ASRKN T E+VSGG SFFSRK*A G S + M FL TI L
Sbjct: 376 YKPSR*NP*FAVIPHNASRKN*TRNERVSGGRSFFSRK*AAGPSSSNAMMFL*IGKTILL 197
Query: 233 MPMLSAALETMWNPARRNCRASTPTSSFSFSG 138
+PMLSAAL+T+ NPA NC AS T SF+ SG
Sbjct: 196 IPMLSAALDTI*NPA*PNCSASMATCSFTLSG 101
>gb|DR094118.1|DR094118 STRR1_12_C07.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_12_C07_A033 5', mRNA sequence
Length = 838
Score = 244 bits (528), Expect = 3e-064
Identities = 101/132 (76%), Positives = 118/132 (89%)
Frame = +1 / +3
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
HIVSRAALNMGIS+IVF +YRN+I+L LL P AYFLEKK+RPPLT S LV+FFLLALCGI
Sbjct: 183 HIVSRAALNMGISKIVFPIYRNIIALLLLGPAAYFLEKKERPPLTLSFLVQFFLLALCGI 362
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
TANQGFYLLGLY+ +PT+ASAIQN+VPAITF+MAA+L LE+V + R GLAK+VGTV +
Sbjct: 363 TANQGFYLLGLYYTTPTFASAIQNSVPAITFIMAAILGLEEVHIRRLDGLAKIVGTVACV 542
Query: 559 GGATVITLYKGP 594
GGAT+ITLYKGP
Sbjct: 543 GGATIITLYKGP 578
Score = 177 bits (381), Expect = 6e-044
Identities = 89/152 (58%), Positives = 100/152 (65%)
Frame = -3 / -1
Query: 593 GPLYRVMTVAPPMLTTVPTTLAXXXXXXXXXXXXXXTAAMTKVIAGTVFCIAEA*VGDR* 414
GPL RV+ VAPP TVPT LA AAM KVIAGT FC+A+A VG *
Sbjct: 577 GPL*RVIIVAPPTQATVPTILANPSSLLMWTSSSPRIAAMIKVIAGTEFCMADANVGVV* 398
Query: 413 YRPRR*KPWFAVIPHSASRKNSTSKEKVSGGLSFFSRK*ANGASKAREMRFLYTMNTISL 234
Y+P R* P FAVIPH+ASRKN T E+VSGG SFFSRK*A G S + M FL TI L
Sbjct: 397 YKPSR*NP*FAVIPHNASRKN*TRNERVSGGRSFFSRK*AAGPSSSNAMMFL*IGKTILL 218
Query: 233 MPMLSAALETMWNPARRNCRASTPTSSFSFSG 138
+PMLSAAL+T+ NPA NC AS T SF+ SG
Sbjct: 217 IPMLSAALDTI*NPA*PNCSASMATCSFTLSG 122
>gb|CF478049.1|CF478049 RTWW3_17_E06.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_17_E06_A022 5', mRNA sequence
Length = 828
Score = 137 bits (294), Expect(2) = 4e-060
Identities = 57/70 (81%), Positives = 63/70 (90%)
Frame = +1 / +2
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
HIVSRAALNMGIS+IVF +YRN+I+L LL P AYFLEKK+RPPLT S LV+FFLLALCGI
Sbjct: 203 HIVSRAALNMGISKIVFPIYRNIIALLLLGPAAYFLEKKERPPLTLSFLVQFFLLALCGI 382
Query: 379 TANQGFYLLG 408
TANQGFYL G
Sbjct: 383 TANQGFYLAG 412
Score = 117 bits (250), Expect(2) = 7e-040
Identities = 57/90 (63%), Positives = 64/90 (71%)
Frame = -3 / -1
Query: 407 PRR*KPWFAVIPHSASRKNSTSKEKVSGGLSFFSRK*ANGASKAREMRFLYTMNTISLMP 228
P R* P FAVIPH+ASRKN T E+VSGG SFFSRK*A G S + M FL TI L+P
Sbjct: 411 PAR*NP*FAVIPHNASRKN*TRNERVSGGRSFFSRK*AAGPSSSNAMMFL*IGKTILLIP 232
Query: 227 MLSAALETMWNPARRNCRASTPTSSFSFSG 138
MLSAAL+T+ NPA NC AS T SF+ SG
Sbjct: 231 MLSAALDTI*NPA*PNCSASMATCSFTLSG 142
Score = 114 bits (243), Expect(2) = 4e-060
Identities = 46/65 (70%), Positives = 57/65 (87%)
Frame = +1 / +3
Query: 400 LLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSIGGATVIT 579
LLGLY+ +PT+ASAIQN+VPAITF+MAA+L LE+V + R GLAK+VGTV +GGAT+IT
Sbjct: 405 LLGLYYTTPTFASAIQNSVPAITFIMAAILGLEEVHIRRLDGLAKIVGTVACVGGATIIT 584
Query: 580 LYKGP 594
LYKGP
Sbjct: 585 LYKGP 599
Score = 66.6 bits (139), Expect(2) = 7e-040
Identities = 33/65 (50%), Positives = 38/65 (58%)
Frame = -3 / -3
Query: 593 GPLYRVMTVAPPMLTTVPTTLAXXXXXXXXXXXXXXTAAMTKVIAGTVFCIAEA*VGDR* 414
GPL RV+ VAPP TVPT LA AAM KVIAGT FC+A+A VG *
Sbjct: 598 GPL*RVIIVAPPTQATVPTILANPSSLLMWTSSSPRIAAMIKVIAGTEFCMADANVGVV* 419
Query: 413 YRPRR 399
Y+P +
Sbjct: 418 YKPSK 404
>gb|BX254250.1|BX254250 BX254250 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP095F03, mRNA sequence
Length = 577
Score = 223 bits (482), Expect = 7e-058
Identities = 93/123 (75%), Positives = 109/123 (88%)
Frame = +1 / +1
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
HIVSRAALNMGIS+IVF +YRN+I+L LL P AYFLEKK+RPPLT S LV+FFLLALCGI
Sbjct: 208 HIVSRAALNMGISKIVFPIYRNIIALLLLGPAAYFLEKKERPPLTLSFLVQFFLLALCGI 387
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
TANQGFYLLGLY+ +PT+ASAIQN+VPAITF+MAA+L LE+V + R GLAK+VGTV +
Sbjct: 388 TANQGFYLLGLYYTTPTFASAIQNSVPAITFIMAAILGLEEVHIRRLDGLAKIVGTVACV 567
Query: 559 GGA 567
GGA
Sbjct: 568 GGA 576
Score = 163 bits (350), Expect = 1e-039
Identities = 82/143 (57%), Positives = 92/143 (64%)
Frame = -3 / -3
Query: 566 APPMLTTVPTTLAXXXXXXXXXXXXXXTAAMTKVIAGTVFCIAEA*VGDR*YRPRR*KPW 387
APP TVPT LA AAM KVIAGT FC+A+A VG *Y+P R* P
Sbjct: 575 APPTQATVPTILANPSSLLMWTSSSPRIAAMIKVIAGTEFCMADANVGVV*YKPSR*NP* 396
Query: 386 FAVIPHSASRKNSTSKEKVSGGLSFFSRK*ANGASKAREMRFLYTMNTISLMPMLSAALE 207
FAVIPH+ASRKN T E+VSGG SFFSRK*A G S + M FL TI L+PMLSAAL+
Sbjct: 395 FAVIPHNASRKN*TRNERVSGGRSFFSRK*AAGPSSSNAMMFL*IGKTILLIPMLSAALD 216
Query: 206 TMWNPARRNCRASTPTSSFSFSG 138
T+ NPA NC AS SF+ SG
Sbjct: 215 TI*NPA*PNCSASMAACSFTLSG 147
>gb|AY608411.1| Pinus taeda nodulin-like protein 5NG4 mRNA, complete cds
Length = 1651
Score = 209 bits (451), Expect = 1e-053
Identities = 87/132 (65%), Positives = 107/132 (81%)
Frame = +1 / +3
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
HIVSRAALNMG+S++VF VYRN+++L L+ P AYFLEKK+RP LT S L++FFLLALCGI
Sbjct: 306 HIVSRAALNMGVSKVVFPVYRNILALMLIGPCAYFLEKKERPALTLSFLIQFFLLALCGI 485
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
T L + PT+ASAIQN+VPAITF+MAA LRLE+V +SRR GLAK++GTV +
Sbjct: 486 TGQSRILSLRIVLHIPTFASAIQNSVPAITFIMAAALRLEKVHISRRDGLAKIIGTVACV 665
Query: 559 GGATVITLYKGP 594
GAT+ITLYKGP
Sbjct: 666 SGATIITLYKGP 701
Score = 90.9 bits (192), Expect(2) = 2e-028
Identities = 44/80 (55%), Positives = 49/80 (61%)
Frame = -3 / -1
Query: 380 VIPHSASRKNSTSKEKVSGGLSFFSRK*ANGASKAREMRFLYTMNTISLMPMLSAALETM 201
VIP SA RKN K+ V G SFFSRK*A G + FLYT NT L P+ AALET+
Sbjct: 487 VIPQSARRKN*IKKDNVRAGRSFFSRK*AQGPINIKARMFLYTGNTTLLTPIFRAALETI 308
Query: 200 WNPARRNCRASTPTSSFSFS 141
WNPA N RAS SF+ S
Sbjct: 307 WNPA*PN*RASMAACSFTLS 248
Score = 55.1 bits (114), Expect(2) = 2e-028
Identities = 28/57 (49%), Positives = 31/57 (54%)
Frame = -3 / -1
Query: 593 GPLYRVMTVAPPMLTTVPTTLAXXXXXXXXXXXXXXTAAMTKVIAGTVFCIAEA*VG 423
GPLY V+ VAP TVP LA AA+ KVIAGT FC+AEA VG
Sbjct: 700 GPLYSVIMVAPLTQATVPIILAKPSLLLIWTFSNLRAAAIIKVIAGTEFCMAEAKVG 530
>gb|DR110236.1|DR110236 RTS1_9_E09.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_9_E09_A029 5', mRNA sequence
Length = 918
Score = 162 bits (348), Expect = 2e-039
Identities = 66/131 (50%), Positives = 92/131 (70%)
Frame = +1 / +1
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+++++ AL G++ VF+ YR +I+ +AP AY LE+K RPP+T S+ + FLLAL GI
Sbjct: 112 NVLTKLALADGMNHFVFVTYRQIIATLAIAPLAYVLERKQRPPMTLSIFFQIFLLALGGI 291
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
NQ FY GL + + T+A+A N +P +TFVMA VLR E V++ GLAKVVGT+V +
Sbjct: 292 AINQNFYFAGLNYTNSTFAAATTNLIPVVTFVMATVLRYENVNIRSLRGLAKVVGTIVCV 471
Query: 559 GGATVITLYKG 591
GGA V+TLYKG
Sbjct: 472 GGAMVMTLYKG 504
>gb|CF470628.1|CF470628 RTDS1_13_E12.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_13_E12_A015 5', mRNA sequence
Length = 716
Score = 160 bits (344), Expect = 8e-039
Identities = 65/132 (49%), Positives = 95/132 (71%)
Frame = +1 / +1
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+S+ +LN G+S V +VYR ++ +LAPFA+FLE+K RP LTFS+ + F+L L G
Sbjct: 160 NIISKVSLNRGMSHFVLVVYRQAVATVVLAPFAFFLERKMRPKLTFSIFCQIFVLGLLGP 339
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q F LGL SPTYA A+ N +P +TFV+A +LR+E+V++ + AK+VGT+V +
Sbjct: 340 VIDQNFSYLGLKLTSPTYACALSNVLPCMTFVIALLLRMERVNIKKLRSGAKLVGTIVCV 519
Query: 559 GGATVITLYKGP 594
GGA ++TLYKGP
Sbjct: 520 GGAMLMTLYKGP 555
>gb|DR120323.1|DR120323 RTMG1_29_A06.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_29_A06_A029 3', mRNA sequence
Length = 866
Score = 160 bits (344), Expect = 8e-039
Identities = 65/132 (49%), Positives = 95/132 (71%)
Frame = +1 / -3
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+S+ +LN G+S V +VYR ++ +LAPFA+FLE+K RP LTFS+ + F+L L G
Sbjct: 846 NIISKVSLNRGMSHFVLVVYRQAVATVVLAPFAFFLERKMRPKLTFSIFCQIFVLGLLGP 667
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q F LGL SPTYA A+ N +P +TFV+A +LR+E+V++ + AK+VGT+V +
Sbjct: 666 VIDQNFSYLGLKLTSPTYACALSNVLPCMTFVIALLLRMERVNIKKLRSGAKLVGTIVCV 487
Query: 559 GGATVITLYKGP 594
GGA ++TLYKGP
Sbjct: 486 GGAMLMTLYKGP 451
>gb|CF390662.1|CF390662 RTDR2_20_D03.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_20_D03_A021 5', mRNA
sequence
Length = 759
Score = 160 bits (343), Expect = 1e-038
Identities = 63/132 (47%), Positives = 94/132 (71%)
Frame = +1 / +3
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+++ +LN G++ V +VYR+ + +LAPFA+F+E+K RP LTF + + F+L L G
Sbjct: 180 NIITKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFIERKVRPKLTFPIFWQIFVLGLLGP 359
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q FY LGL SPTYA A+ N +PA+TFVMA + R+E+V++ AK+VGT+V +
Sbjct: 360 VIDQNFYYLGLKLTSPTYACALSNVLPAMTFVMALIFRMERVNIKNLRSQAKIVGTIVCV 539
Query: 559 GGATVITLYKGP 594
GGA ++TLYKGP
Sbjct: 540 GGAMLMTLYKGP 575
>gb|CF476506.1|CF476506 RTWW3_1_C09.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_1_C09_A022 5', mRNA sequence
Length = 638
Score = 160 bits (343), Expect = 1e-038
Identities = 63/132 (47%), Positives = 94/132 (71%)
Frame = +1 / +2
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+S+ +LN G++ V +VYR+ + +LAPFA+F+E+K RP LTFS+ ++ F+L L G
Sbjct: 155 NIISKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFIERKVRPKLTFSIFLQIFVLGLLGP 334
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q FY LGL SPTYA A+ N +PA+TFVMA + R+E V++ + AK+ GT+V +
Sbjct: 335 VIDQNFYYLGLKLTSPTYACALSNVLPAMTFVMALLFRMETVNIKKLRSQAKIAGTIVCV 514
Query: 559 GGATVITLYKGP 594
GA ++TLYKGP
Sbjct: 515 AGAMLMTLYKGP 550
>gb|CO367342.1|CO367342 RTK1_33_E12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_33_E12_A029 5', mRNA sequence
Length = 765
Score = 160 bits (343), Expect = 1e-038
Identities = 63/132 (47%), Positives = 94/132 (71%)
Frame = +1 / +3
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+++ +LN G++ V +VYR+ + +LAPFA+F+E+K RP LTF + + F+L L G
Sbjct: 141 NIITKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFIERKVRPKLTFPIFWQIFVLGLLGP 320
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q FY LGL SPTYA A+ N +PA+TFVMA + R+E+V++ AK+VGT+V +
Sbjct: 321 VIDQNFYYLGLKLTSPTYACALSNVLPAMTFVMALIFRMERVNIKNLRSQAKIVGTIVCV 500
Query: 559 GGATVITLYKGP 594
GGA ++TLYKGP
Sbjct: 501 GGAMLMTLYKGP 536
>gb|CO367804.1|CO367804 RTK1_36_F02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_36_F02_A029 5', mRNA sequence
Length = 751
Score = 160 bits (343), Expect = 1e-038
Identities = 63/132 (47%), Positives = 94/132 (71%)
Frame = +1 / +1
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+++ +LN G++ V +VYR+ + +LAPFA+F+E+K RP LTF + + F+L L G
Sbjct: 169 NIITKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFIERKVRPKLTFPIFWQIFVLGLLGP 348
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q FY LGL SPTYA A+ N +PA+TFVMA + R+E+V++ AK+VGT+V +
Sbjct: 349 VIDQNFYYLGLKLTSPTYACALSNVLPAMTFVMALIFRMERVNIKNLRSQAKIVGTIVCV 528
Query: 559 GGATVITLYKGP 594
GGA ++TLYKGP
Sbjct: 529 GGAMLMTLYKGP 564
>gb|DR687035.1|DR687035 EST1077113 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABM57 3' end, mRNA sequence
Length = 669
Score = 159 bits (341), Expect = 2e-038
Identities = 63/132 (47%), Positives = 96/132 (72%)
Frame = +1 / +1
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+++ +LN G++ V +VYR+ + +LAPFA+F+E+K RP LTFS+ + F+L L G
Sbjct: 187 NILTKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFVERKVRPKLTFSIFCQSFVLGLLGP 366
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q Y LGL SPTYASA+ N +PA+TFVMA + R+E++++ +R AK+VGT+V +
Sbjct: 367 VIDQNLYYLGLKLTSPTYASALSNVLPAMTFVMALIFRMERLNIKKRRSQAKIVGTIVCV 546
Query: 559 GGATVITLYKGP 594
GA ++TLYKGP
Sbjct: 547 VGAILMTLYKGP 582
>gb|CF474025.1|CF474025 RTWW2_18_D06.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_18_D06_A021 3', mRNA sequence
Length = 698
Score = 158 bits (340), Expect = 3e-038
Identities = 62/132 (46%), Positives = 94/132 (71%)
Frame = +1 / -2
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+++ +L G+S V +VYR+ ++ A++APFA+F+E+K RP +TFS+ + F L L G
Sbjct: 517 NIITKVSLTNGMSHYVLVVYRHAVATAVMAPFAFFVERKVRPKITFSIFCQIFALGLLGP 338
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q FY GL + SPT+A A+ N +PA+TFVMAA+ R+E+VD+ K+ GTVV +
Sbjct: 337 VIDQNFYYAGLKYTSPTFACAMSNVLPAMTFVMAALFRMEKVDIKMVRSQTKIAGTVVCV 158
Query: 559 GGATVITLYKGP 594
GGA ++TLYKGP
Sbjct: 157 GGAMLMTLYKGP 122
>gb|DR167860.1|DR167860 RTPHOS1_21_D01.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_21_D01_A029 5', mRNA sequence
Length = 623
Score = 158 bits (340), Expect = 3e-038
Identities = 62/132 (46%), Positives = 94/132 (71%)
Frame = +1 / +3
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+++ +L G+S V +VYR+ ++ A++APFA+F+E+K RP +TFS+ + F L L G
Sbjct: 156 NIITKVSLTNGMSHYVLVVYRHAVATAVMAPFAFFVERKVRPKITFSIFCQIFALGLLGP 335
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q FY GL + SPT+A A+ N +PA+TFVMAA+ R+E+VD+ K+ GTVV +
Sbjct: 336 VIDQNFYYAGLKYTSPTFACAMSNVLPAMTFVMAALFRMEKVDIKMVRSQTKIAGTVVCV 515
Query: 559 GGATVITLYKGP 594
GGA ++TLYKGP
Sbjct: 516 GGAMLMTLYKGP 551
>gb|DR384632.1|DR384632 RTHG1_3_B11.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_3_B11_A029 5', mRNA sequence
Length = 743
Score = 158 bits (340), Expect = 3e-038
Identities = 62/132 (46%), Positives = 94/132 (71%)
Frame = +1 / +3
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+++ +LN G++ V +VYR+ + +LAPFA+F+E+K RP LTF + + F+L L G
Sbjct: 207 NIITKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFIERKARPKLTFPIFWQIFVLGLLGP 386
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q FY LGL SPTYA A+ N +PA+TFV+A + R+E+V++ AK+VGT+V +
Sbjct: 387 VIDQNFYYLGLKLTSPTYACALSNVLPAMTFVIALIFRMERVNIKNLRSQAKIVGTIVCV 566
Query: 559 GGATVITLYKGP 594
GGA ++TLYKGP
Sbjct: 567 GGAMLMTLYKGP 602
>gb|CO171061.1|CO171061 NDL1_18_F06.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_18_F06_A029 5', mRNA sequence
Length = 824
Score = 156 bits (336), Expect = 1e-037
Identities = 63/132 (47%), Positives = 91/132 (68%)
Frame = +1 / +2
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I++R AL G++ +F+ YR ++ +L+PFAYFLE+ +RP +T ++ E F LA GI
Sbjct: 116 NILTRLALEDGMNHFIFVCYRQAVASLVLSPFAYFLERSERPAMTCAVFWEIFTLAFVGI 295
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
T NQ Y GL + S T+ASA N +P +TFV+A R+E V++ +G AKVVGT+V +
Sbjct: 296 TMNQNLYFAGLQYTSSTFASATTNLIPVVTFVLATTFRMEHVNIRSIYGQAKVVGTLVCV 475
Query: 559 GGATVITLYKGP 594
GGA V+TLYKGP
Sbjct: 476 GGAMVMTLYKGP 511
>gb|DR092668.1|DR092668 STRR1_2_H07.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_2_H07_A033 5', mRNA sequence
Length = 868
Score = 156 bits (336), Expect = 1e-037
Identities = 63/132 (47%), Positives = 91/132 (68%)
Frame = +1 / +1
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I++R AL G++ +F+ YR ++ +L+PFAYFLE+ +RP +T ++ E F LA GI
Sbjct: 178 NILTRLALEDGMNHFIFVCYRQAVASLVLSPFAYFLERSERPAMTCAVFWEIFTLAFVGI 357
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
T NQ Y GL + S T+ASA N +P +TFV+A R+E V++ +G AKVVGT+V +
Sbjct: 358 TMNQNLYFAGLQYTSSTFASATTNLIPVVTFVLATTFRMEHVNIRSIYGQAKVVGTLVCV 537
Query: 559 GGATVITLYKGP 594
GGA V+TLYKGP
Sbjct: 538 GGAMVMTLYKGP 573
>gb|CF392847.1|CF392847 RTDR3_19_G07.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_19_G07_A022 5', mRNA
sequence
Length = 843
Score = 156 bits (335), Expect = 1e-037
Identities = 61/132 (46%), Positives = 94/132 (71%)
Frame = +1 / +2
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+++ +LN G++ V +VYR+ ++ +LAPFA+F+E+K RP LTF + + F+L L G
Sbjct: 194 NIITKVSLNRGMNHFVLVVYRHAVATVVLAPFAFFIERKVRPKLTFHIFCQIFVLGLLGP 373
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q FY LGL SPTYA A+ N +PA+TF+MA + R+E+V++ AK+VGT+V +
Sbjct: 374 VIDQNFYYLGLKLTSPTYACALSNVLPAMTFMMALLFRMEKVNIKNLRSQAKIVGTIVCV 553
Query: 559 GGATVITLYKGP 594
GA ++TLYKGP
Sbjct: 554 VGAILMTLYKGP 589
>gb|CO197528.1|CO197528 GEO1_7_D07.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_7_D07_A029 3', mRNA sequence
Length = 768
Score = 156 bits (335), Expect = 1e-037
Identities = 61/132 (46%), Positives = 96/132 (72%)
Frame = +1 / -3
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+S+ +L+ G++ V +VYR+ ++ +LAPFA+F+E+K RP +TFS+ + F L L G
Sbjct: 565 NIISKVSLSGGMNHFVLVVYRHAVATIVLAPFAFFVERKVRPKITFSIFCQIFALGLLGP 386
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q FY LGL SPTY+ A+ N +PA+TFV+A V R+E+V++ + AK++GT+V +
Sbjct: 385 VLDQNFYYLGLKLTSPTYSCALSNVLPAMTFVIALVFRMERVNIKQVRSQAKILGTIVCV 206
Query: 559 GGATVITLYKGP 594
GGA ++TLYKGP
Sbjct: 205 GGAMLMTLYKGP 170
>gb|CO363787.1|CO363787 RTK1_11_G02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_11_G02_A029 5', mRNA sequence
Length = 746
Score = 156 bits (335), Expect = 1e-037
Identities = 61/132 (46%), Positives = 96/132 (72%)
Frame = +1 / +1
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+S+ +L+ G++ V +VYR+ ++ +LAPFA+F+E+K RP +TFS+ + F L L G
Sbjct: 196 NIISKVSLSGGMNHFVLVVYRHAVATIVLAPFAFFVERKVRPKITFSIFCQIFALGLLGP 375
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q FY LGL SPTY+ A+ N +PA+TFV+A V R+E+V++ + AK++GT+V +
Sbjct: 376 VLDQNFYYLGLKLTSPTYSCALSNVLPAMTFVIALVFRMERVNIKQVRSQAKILGTIVCV 555
Query: 559 GGATVITLYKGP 594
GGA ++TLYKGP
Sbjct: 556 GGAMLMTLYKGP 591
>gb|DR025171.1|DR025171 STRS1_70_C04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_70_C04_A034 3', mRNA sequence
Length = 625
Score = 156 bits (335), Expect = 1e-037
Identities = 62/132 (46%), Positives = 92/132 (69%)
Frame = +1 / -1
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I++R AL G++ +F+ YR ++ +L+PFAYFL++ +RP +T ++ E F LA GI
Sbjct: 406 NILTRLALEDGMNHFIFVCYRQAVASLVLSPFAYFLQRSERPAMTCAVFWEIFTLAFVGI 227
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
T NQ Y GL + S T+ASA N +P +TFV+A R+E V+++ +G AKVVGT+V +
Sbjct: 226 TMNQNLYFAGLQYTSSTFASATTNLIPVVTFVLATTFRMEHVNITSIYGQAKVVGTLVCV 47
Query: 559 GGATVITLYKGP 594
GGA V+TLYKGP
Sbjct: 46 GGAMVMTLYKGP 11
>gb|DR071708.1|DR071708 RTDK1_21_D03.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_21_D03_A029 5', mRNA sequence
Length = 724
Score = 156 bits (335), Expect = 1e-037
Identities = 61/132 (46%), Positives = 96/132 (72%)
Frame = +1 / +2
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+S+ +L+ G++ V +VYR+ ++ +LAPFA+F+E+K RP +TFS+ + F L L G
Sbjct: 188 NIISKVSLSGGMNHFVLVVYRHAVATIVLAPFAFFVERKVRPKITFSIFCQIFALGLLGP 367
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q FY LGL SPTY+ A+ N +PA+TFV+A V R+E+V++ + AK++GT+V +
Sbjct: 368 VLDQNFYYLGLKLTSPTYSCALSNVLPAMTFVIALVFRMERVNIKQVRSQAKILGTIVCV 547
Query: 559 GGATVITLYKGP 594
GGA ++TLYKGP
Sbjct: 548 GGAMLMTLYKGP 583
>gb|DR682638.1|DR682638 EST1072713 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAB20 3' end, mRNA sequence
Length = 767
Score = 156 bits (335), Expect = 1e-037
Identities = 63/132 (47%), Positives = 91/132 (68%)
Frame = +1 / +2
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I++R AL G++ +F+ YR ++ +L+PFAYFLE+ +RP +T ++ E F LA GI
Sbjct: 269 NILTRLALEDGMNHFIFVCYRQAVASLVLSPFAYFLERSERPVMTCAVFWEIFTLAFVGI 448
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
T NQ Y GL + S T+ASA N +P +TFV+A R+E V++ +G AKVVGT+V +
Sbjct: 449 TMNQNLYFAGLQYTSSTFASATTNLIPVVTFVLATTFRMEHVNIRSIYGQAKVVGTLVCV 628
Query: 559 GGATVITLYKGP 594
GGA V+TLYKGP
Sbjct: 629 GGAMVMTLYKGP 664
>gb|BX250922.1|BX250922 BX250922 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP042H11, mRNA sequence
Length = 671
Score = 154 bits (331), Expect = 5e-037
Identities = 62/133 (46%), Positives = 95/133 (71%)
Frame = +1 / +2
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
H++++ AL +G++++VF VYR+L++L+LL P AYF EK+ RPP+T LL FF L L GI
Sbjct: 176 HVITKLALTVGMNQVVFCVYRDLLALSLLGPIAYFKEKRIRPPITRRLLQSFFFLGLTGI 355
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
NQ +++GL + SPTYA+AIQ +P TF++AA++ E V+L+ G KV GT++ I
Sbjct: 356 FGNQLLFIMGLDYTSPTYAAAIQPAIPVFTFMLAAIMGTESVNLNTIDGKVKVGGTLLCI 535
Query: 559 GGATVITLYKGPA 597
GA + +++GPA
Sbjct: 536 FGALFMAIFRGPA 574
>gb|BX784100.1|BX784100 BX784100 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 129B03, mRNA sequence
Length = 676
Score = 154 bits (331), Expect = 5e-037
Identities = 62/133 (46%), Positives = 95/133 (71%)
Frame = +1 / +3
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
H++++ AL +G++++VF VYR+L++L+LL P AYF EK+ RPP+T LL FF L L GI
Sbjct: 177 HVITKLALTVGMNQVVFCVYRDLLALSLLGPIAYFKEKRIRPPITRRLLQSFFFLGLTGI 356
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
NQ +++GL + SPTYA+AIQ +P TF++AA++ E V+L+ G KV GT++ I
Sbjct: 357 FGNQLLFIMGLDYTSPTYAAAIQPAIPVFTFMLAAIMGTESVNLNTIDGKVKVGGTLLCI 536
Query: 559 GGATVITLYKGPA 597
GA + +++GPA
Sbjct: 537 FGALFMAIFRGPA 575
>gb|CO167692.1|CO167692 FLD1_70_C03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_70_C03_A029 5', mRNA sequence
Length = 650
Score = 154 bits (330), Expect = 7e-037
Identities = 62/131 (47%), Positives = 90/131 (68%)
Frame = +1 / +1
Query: 202 IVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGIT 381
I+S+ ALN G++ V +VYR ++ +LAPFA+F E+K RP L FS+ + F+L L
Sbjct: 49 IISKVALNRGMNHFVLVVYRQTVATVVLAPFAFFFERKVRPKLKFSIFCQIFVLGLLEPV 228
Query: 382 ANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSIG 561
+Q FY LGL SPTYA + N +PA+TFVMA + R+E +++ + AK+VGT+V +G
Sbjct: 229 MDQNFYYLGLKLTSPTYAVTLINVLPAMTFVMALLFRMESLNIKKLRSQAKIVGTIVCVG 408
Query: 562 GATVITLYKGP 594
GA ++TLYKGP
Sbjct: 409 GAMLMTLYKGP 441
>gb|CF387362.1|CF387362 RTDR1_12_G11.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_12_G11_A015 5', mRNA
sequence
Length = 750
Score = 152 bits (327), Expect = 2e-036
Identities = 61/133 (45%), Positives = 95/133 (71%)
Frame = +1 / +1
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
H++++ AL +G++++VF V+R+L++L+LL P AYF EK+ RPP+T LL FF L L GI
Sbjct: 97 HVITKLALTVGMNQVVFCVFRDLLALSLLGPIAYFKEKRIRPPITRRLLQSFFFLGLTGI 276
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
NQ +++GL + SPTYA+AIQ +P TF++AA++ E V+L+ G KV GT++ I
Sbjct: 277 FGNQLLFIMGLDYTSPTYAAAIQPAIPVFTFMLAAIMGTESVNLNTIDGKVKVGGTLLCI 456
Query: 559 GGATVITLYKGPA 597
GA + +++GPA
Sbjct: 457 FGALFMAIFRGPA 495
>gb|CF471103.1|CF471103 RTDS1_16_C03.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_16_C03_A015 5', mRNA sequence
Length = 822
Score = 152 bits (327), Expect = 2e-036
Identities = 61/133 (45%), Positives = 95/133 (71%)
Frame = +1 / +2
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
H++++ AL +G++++VF V+R+L++L+LL P AYF EK+ RPP+T LL FF L L GI
Sbjct: 170 HVITKLALTVGMNQVVFCVFRDLLALSLLGPIAYFKEKRIRPPITRRLLQSFFFLGLTGI 349
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
NQ +++GL + SPTYA+AIQ +P TF++AA++ E V+L+ G KV GT++ I
Sbjct: 350 FGNQLLFIMGLDYTSPTYAAAIQPAIPVFTFMLAAIMGTESVNLNTIDGKVKVGGTLLCI 529
Query: 559 GGATVITLYKGPA 597
GA + +++GPA
Sbjct: 530 FGALFMAIFRGPA 568
>gb|CV031904.1|CV031904 RTNACL1_4_B04.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_4_B04_A029 5', mRNA sequence
Length = 825
Score = 152 bits (327), Expect = 2e-036
Identities = 61/133 (45%), Positives = 95/133 (71%)
Frame = +1 / +3
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
H++++ AL +G++++VF V+R+L++L+LL P AYF EK+ RPP+T LL FF L L GI
Sbjct: 174 HVITKLALTVGMNQVVFCVFRDLLALSLLGPIAYFKEKRIRPPITRRLLQSFFFLGLTGI 353
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
NQ +++GL + SPTYA+AIQ +P TF++AA++ E V+L+ G KV GT++ I
Sbjct: 354 FGNQLLFIMGLDYTSPTYAAAIQPAIPVFTFMLAAIMGTESVNLNTIDGKVKVGGTLLCI 533
Query: 559 GGATVITLYKGPA 597
GA + +++GPA
Sbjct: 534 FGALFMAIFRGPA 572
>gb|CV032789.1|CV032789 RTNACL1_18_H01.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_18_H01_A029 3', mRNA sequence
Length = 788
Score = 152 bits (327), Expect = 2e-036
Identities = 61/132 (46%), Positives = 93/132 (70%)
Frame = +1 / -3
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+++ +LN G++ V +VYR+ + LAPFA+F+E+K RP LTF + F+L L G
Sbjct: 612 NIITKVSLNRGMNHYVLVVYRHAAATIALAPFAFFVERKVRPKLTFYTFCQMFVLGLLGP 433
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q FY LGL +PT+A A+ N +PA+TFVMA + R+E+V++ AK+VGT++S+
Sbjct: 432 VLDQNFYYLGLKLTTPTFACALSNLLPAMTFVMALLFRMEKVNIKNIRSQAKIVGTILSV 253
Query: 559 GGATVITLYKGP 594
GGA ++TLYKGP
Sbjct: 252 GGAMLMTLYKGP 217
>gb|DT625230.1|DT625230 EST1159505 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAN30 5' end, mRNA sequence
Length = 795
Score = 152 bits (327), Expect = 2e-036
Identities = 61/133 (45%), Positives = 95/133 (71%)
Frame = +1 / +3
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
H++++ AL +G++++VF V+R+L++L+LL P AYF EK+ RPP+T LL FF L L GI
Sbjct: 96 HVITKLALTVGMNQVVFCVFRDLLALSLLGPIAYFKEKRIRPPITRRLLQSFFFLGLTGI 275
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
NQ +++GL + SPTYA+AIQ +P TF++AA++ E V+L+ G KV GT++ I
Sbjct: 276 FGNQLLFIMGLDYTSPTYAAAIQPAIPVFTFMLAAIMGTESVNLNTIDGKVKVGGTLLCI 455
Query: 559 GGATVITLYKGPA 597
GA + +++GPA
Sbjct: 456 FGALFMAIFRGPA 494
>gb|CX648371.1|CX648371 COLD1_28_F03.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_28_F03_A029 3', mRNA sequence
Length = 766
Score = 151 bits (325), Expect = 3e-036
Identities = 59/132 (44%), Positives = 90/132 (68%)
Frame = +1 / -1
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+ +A LN G S V +VYR++ + LAPFA+F+E+K+RP +TF + F+L G
Sbjct: 745 NIIVKACLNKGFSHFVLVVYRHVAATIALAPFAFFIERKERPKMTFFTFCQIFVLGSLGP 566
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q Y +GL SPTYA A+ N +PA+TFVMA + R+E+V++ + AK+VGT+V +
Sbjct: 565 VLDQNLYYIGLKLTSPTYACALSNLLPAMTFVMALIFRMERVNIKKLRSQAKIVGTIVCV 386
Query: 559 GGATVITLYKGP 594
GGA ++T+Y GP
Sbjct: 385 GGAMLMTMYNGP 350
>gb|DR385454.1|DR385454 RTHG1_8_F06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_8_F06_A029 5', mRNA sequence
Length = 821
Score = 151 bits (325), Expect = 3e-036
Identities = 61/131 (46%), Positives = 89/131 (67%)
Frame = +1 / +1
Query: 202 IVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGIT 381
I+S+ ALN G++ V +VYR ++ +LAPFA+F E+ RP L FS+ + F+L L
Sbjct: 109 IISKVALNRGMNHFVLVVYRQTVATVVLAPFAFFFERNVRPKLKFSIFCQIFVLGLLEPV 288
Query: 382 ANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSIG 561
+Q FY LGL SPTYA + N +PA+TFVMA + R+E +++ + AK+VGT+V +G
Sbjct: 289 MDQNFYYLGLKLTSPTYAVTLINVLPAMTFVMALLFRMESLNIKKLRSQAKIVGTIVCVG 468
Query: 562 GATVITLYKGP 594
GA ++TLYKGP
Sbjct: 469 GAMLMTLYKGP 501
>gb|CO166712.1|CO166712 FLD1_64_A09.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_64_A09_A029 3', mRNA sequence
Length = 789
Score = 149 bits (321), Expect = 1e-035
Identities = 60/131 (45%), Positives = 88/131 (67%)
Frame = +1 / -1
Query: 202 IVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGIT 381
I+S+ ALN G++ V +VYR ++ +LAPFA+F E+ RP L FS+ + F+L L
Sbjct: 702 IISKVALNRGMNHFVLVVYRQTVATVVLAPFAFFFERNVRPKLKFSIFCQIFVLGLLEPV 523
Query: 382 ANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSIG 561
+Q FY LGL SPTYA + N +PA+TFVMA + R+E +++ + AK+VG +V +G
Sbjct: 522 MDQNFYYLGLKLTSPTYAVTLMNILPAMTFVMALLFRMESLNIKKLRSQAKIVGMIVCVG 343
Query: 562 GATVITLYKGP 594
GA ++TLYKGP
Sbjct: 342 GAMLMTLYKGP 310
>gb|BQ696558.1|BQ696558 NXPV_042_F03_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_042_F03 5' similar to Arabidopsis
thaliana sequence At5g07050 MtN21 nodulin protein-like
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 645
Score = 147 bits (316), Expect = 6e-035
Identities = 58/132 (43%), Positives = 93/132 (70%)
Frame = +1 / +1
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+S+ +L+ G++ V +VYR+ ++ +LAPFA+F+E+K RP +TFS+ + F L L G
Sbjct: 193 NIISKVSLSGGMNHFVLVVYRHAVATIVLAPFAFFVERKVRPKITFSIFCQIFALGLLGP 372
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q FY LGL SPTY+ A+ N +PA+TFV+A V +E+V++ + AK++GT+V +
Sbjct: 373 VLDQNFYYLGLKLTSPTYSCALSNVLPAMTFVIALVFXMERVNIKQVRSQAKILGTIVCV 552
Query: 559 GGATVITLYKGP 594
GA ++TLYK P
Sbjct: 553 XGAXLMTLYKXP 588
>gb|DR091559.1|DR091559 RTAL1_22_A11.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_22_A11_A029 5', mRNA sequence
Length = 845
Score = 146 bits (313), Expect = 2e-034
Identities = 58/131 (44%), Positives = 88/131 (67%)
Frame = +1 / +3
Query: 202 IVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGIT 381
I+S+ AL+ G++ V +VYR ++ +L+PFA+F E+ RP L FS+ + F+L L
Sbjct: 111 IISKVALDRGMNHFVLVVYRQTVATVVLSPFAFFFERNVRPKLKFSIFCQIFVLGLLEPV 290
Query: 382 ANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSIG 561
+Q FY LGL SPTYA + N +PA+TFVMA + R+E +++ + AK+VG +V +G
Sbjct: 291 MDQNFYYLGLKLTSPTYAVTLMNILPAMTFVMALLFRMESLNIKKLRSQAKIVGMIVCVG 470
Query: 562 GATVITLYKGP 594
GA ++TLYKGP
Sbjct: 471 GAMLMTLYKGP 503
>gb|DN450504.1|DN450504 EST946303 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIEQ48 5' end, mRNA sequence
Length = 714
Score = 137 bits (294), Expect = 6e-032
Identities = 57/120 (47%), Positives = 84/120 (70%)
Frame = +1 / +2
Query: 238 EIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGITANQGFYLLGLYH 417
++VF V+R+L++L+LL P AYF EK+ RPP+T LL FF L L GI NQ +++GL +
Sbjct: 2 QVVFCVFRDLLALSLLGPIAYFKEKRIRPPITRRLLQSFFFLGLTGIFGNQLLFIMGLDY 181
Query: 418 LSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSIGGATVITLYKGPA 597
SPTYA+AIQ +P TF++AA++ E V+L+ G KV GT++ I GA + +++GPA
Sbjct: 182 TSPTYAAAIQPAIPVFTFMLAAIMGTESVNLNTIDGKVKVGGTLLCIFGALFMAIFRGPA 361
>gb|DR384820.1|DR384820 RTHG1_4_F11.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_4_F11_A029 5', mRNA sequence
Length = 690
Score = 137 bits (294), Expect = 6e-032
Identities = 55/105 (52%), Positives = 76/105 (72%)
Frame = +1 / +3
Query: 280 LLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGITANQGFYLLGLYHLSPTYASAIQNTVP 459
+LAPFA+F+E+K RP LTF + + F+L L G +Q FY LGL SPTYA A+ N +P
Sbjct: 18 VLAPFAFFIERKVRPKLTFPIFWQIFVLGLLGPVIDQNFYYLGLKLTSPTYACALSNVLP 197
Query: 460 AITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSIGGATVITLYKGP 594
A+TFVMA + R+E+V++ AK+VGT+V +GGA ++TLYKGP
Sbjct: 198 AMTFVMALIFRMERVNIKNLRSQAKIVGTIVCVGGAMLMTLYKGP 332
>gb|DR078570.1|DR078570 RTFEPL1_5_C05.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_5_C05_A029 5', mRNA sequence
Length = 788
Score = 134 bits (287), Expect = 6e-031
Identities = 53/105 (50%), Positives = 77/105 (73%)
Frame = +1 / +3
Query: 280 LLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGITANQGFYLLGLYHLSPTYASAIQNTVP 459
+LAPFA+F+E+K RP +TFS+ + F L L G +Q FY LGL SPTY+ A+ N +P
Sbjct: 3 VLAPFAFFVERKVRPKITFSIFCQIFALGLLGPVLDQNFYYLGLKLTSPTYSCALSNVLP 182
Query: 460 AITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSIGGATVITLYKGP 594
A+TFV+A V R+E+V++ + AK++GT+V +GGA ++TLYKGP
Sbjct: 183 AMTFVIALVFRMERVNIKQVRSQAKILGTIVCVGGAMLMTLYKGP 317
>gb|BG485740.1|BG485740 NXPV_038_C08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_038_C08 5' similar to Arabidopsis
thaliana sequence At5g07050 MtN21 nodulin protein-like
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 417
Score = 133 bits (284), Expect = 2e-030
Identities = 54/129 (41%), Positives = 86/129 (66%)
Frame = +1 / +2
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+S+ +L+ G++ V +VYR+ ++ +LAPFA+F+E+K RP +TFS+ + F L L
Sbjct: 29 NIISKVSLSGGMNHFVLVVYRHAVATIVLAPFAFFVERKVRPKITFSIFCQIFALGLXXP 208
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
FY LGL SPTY+ A+ N +PA+TFV+A V +E+V++ AK++GT+V
Sbjct: 209 VLXXNFYYLGLKLTSPTYSCALSNVLPAMTFVIALVFXMERVNIKXXRSQAKILGTIVCX 388
Query: 559 GGATVITLY 585
GA ++TLY
Sbjct: 389 XGAMLMTLY 415
>gb|BG485786.1|BG485786 NXPV_038_G10_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_038_G10 5' similar to Arabidopsis
thaliana sequence At5g07050 MtN21 nodulin protein-like
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 585
Score = 132 bits (283), Expect = 2e-030
Identities = 54/129 (41%), Positives = 86/129 (66%)
Frame = +1 / +2
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+S+ +L+ G++ V +VYR+ ++ +LAPFA+F+E+K RP +TFS+ + F L L
Sbjct: 188 NIISKVSLSGGMNHFVLVVYRHAVATIVLAPFAFFVERKVRPKITFSIFCQIFALGLXXP 367
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSI 558
+Q FY LGL SPTY+ A+ N A+TFV+A V R E+V++ AK++GT+V +
Sbjct: 368 VLDQNFYYLGLKLTSPTYSCALSNVXXAMTFVIALVFRXERVNIKXXRSQAKILGTIVCV 547
Query: 559 GGATVITLY 585
GA ++T Y
Sbjct: 548 XGAMLMTXY 574
>gb|DT631215.1|DT631215 EST1146146 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF628 3' end, mRNA sequence
Length = 610
Score = 130 bits (279), Expect = 7e-030
Identities = 53/118 (44%), Positives = 79/118 (66%)
Frame = +1 / +1
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I++R AL G++ +F+ YR ++ +L+PFAYFLE+ +RP +T ++ E F LA GI
Sbjct: 256 NILTRLALEDGMNHFIFVCYRQAVASLVLSPFAYFLERSERPVMTCAVFWEIFTLAFVGI 435
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVV 552
T NQ Y GL + S T+ASA N +P +TFV+A R+E V++ +G AKVVGT+V
Sbjct: 436 TMNQNLYFAGLQYTSSTFASATTNLIPVVTFVLATTFRMEHVNIRSIYGQAKVVGTLV 609
>gb|CV033929.1|CV033929 RTNACL1_37_B03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_37_B03_A029 5', mRNA sequence
Length = 661
Score = 84.5 bits (178), Expect(2) = 1e-027
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +1 / +3
Query: 373 GITANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVV 552
GI Y+ GL++ S T+ +A N VP +TFV+A + R E+V+L G AKVVGTV+
Sbjct: 225 GIAITHNCYIPGLHYTSSTFTAAAFNLVPVLTFVIATLRRQEKVNLRSLRGQAKVVGTVI 404
Query: 553 SIGGATVITLYKGP 594
S+ GA V+TLY+GP
Sbjct: 405 SVTGAMVMTLYRGP 446
Score = 58.8 bits (122), Expect(2) = 1e-027
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +1 / +3
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLL 363
+I+ R AL G++ VF+ YR + + +AP AYF +++ RPPLT +L + FLL
Sbjct: 54 YIMVRIALRDGMNHFVFVTYRQIFATITIAPLAYFSKRRQRPPLTRPVLFQIFLL 218
>gb|CO369832.1|CO369832 RTK1_54_A12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_54_A12_A029 5', mRNA sequence
Length = 520
Score = 122 bits (262), Expect = 2e-027
Identities = 48/104 (46%), Positives = 75/104 (72%)
Frame = +1 / +2
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGI 378
+I+++ +LN G++ V +VYR+ + +LAPFA+F+E+K RP LTF + + F+L L G
Sbjct: 191 NIITKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFIERKVRPKLTFPIFWQIFVLGLLGP 370
Query: 379 TANQGFYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDL 510
+Q FY +GL SPTYASA+ N +PA+TFVMA + R+E+V++
Sbjct: 371 VIDQNFYYMGLKLTSPTYASALSNLLPAMTFVMALIFRMERVNI 502
>gb|AA557006.1|AA557006 848 Loblolly pine N Pinus taeda cDNA clone 5N4G, mRNA sequence
Length = 627
Score = 96.4 bits (204), Expect(3) = 4e-027
Identities = 38/59 (64%), Positives = 48/59 (81%)
Frame = +1 / +2
Query: 199 HIVSRAALNMGISEIVFMVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCG 375
HIVS+AALNMG+S++VF VY N+++L L+ P AYFL K+RP LT S L+ FFLLALCG
Sbjct: 332 HIVSKAALNMGVSKVVFPVYXNILALMLIGPCAYFLXXKERPALTLSFLIXFFLLALCG 508
Score = 33.1 bits (66), Expect(3) = 4e-027
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1 / +2
Query: 424 PTYASAIQNTVPAITFVMA 480
P + IQN+VPAITF+MA
Sbjct: 557 PNFCFTIQNSVPAITFIMA 613
Score = 29.5 bits (58), Expect(3) = 4e-027
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1 / +3
Query: 352 FFLLALCGITANQGFYLLGLYHLSPTYAS 438
F L GITANQ YLL PT+AS
Sbjct: 486 FSFLHSVGITANQXIYLLRXVLHIPTFAS 572
>gb|BX680621.1|BX680621 BX680621 RS Pinus pinaster cDNA clone RS46A04, mRNA sequence
Length = 606
Score = 120 bits (256), Expect = 1e-026
Identities = 48/67 (71%), Positives = 59/67 (88%)
Frame = +1 / +2
Query: 394 FYLLGLYHLSPTYASAIQNTVPAITFVMAAVLRLEQVDLSRRHGLAKVVGTVVSIGGATV 573
FYLLGLY+ +PT+ASAIQN+VPAITF+MAA+L LE+V + R GLAK+VGTV +GGAT+
Sbjct: 2 FYLLGLYYTTPTFASAIQNSVPAITFIMAAILGLEEVHIRRLDGLAKIVGTVACVGGATI 181
Query: 574 ITLYKGP 594
ITLYKGP
Sbjct: 182 ITLYKGP 202
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 276,410,030
Number of Sequences: 355925
Number of extensions: 3199132
Number of successful extensions: 42442
Number of sequences better than 1.0e-020: 69
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 8466676920
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)