TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QBTB.006E19F020311.3.1
         (789 letters)

Database: Pinus_nucl_with_EST.fasta 
           355,925 sequences; 217,277,237 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|DR047829.1|DR047829  RTBOR1_3_H04.g1_A029 Roots plus adde...   116   2e-025
gb|DR047767.1|DR047767  RTBOR1_3_H04.b1_A029 Roots plus adde...   116   3e-025

>gb|DR047829.1|DR047829 RTBOR1_3_H04.g1_A029 Roots plus added boron Pinus taeda cDNA clone
           RTBOR1_3_H04_A029 5', mRNA sequence
          Length = 414

 Score =  116 bits (248), Expect = 2e-025
 Identities = 45/67 (67%), Positives = 55/67 (82%)
 Frame = +2 / +2

                                                                       
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFR 658
           V+L  L YEKQ   RIMMKMHGL+DGPYW+I+Y YFL LSI+YM+ F+ FGS +GL FFR
Sbjct: 212 VILASLGYEKQNNQRIMMKMHGLRDGPYWIITYGYFLVLSIIYMVCFVGFGSAVGLKFFR 391

                  
Query: 659 VNEYSIQ 679
           +N+YSIQ
Sbjct: 392 LNDYSIQ 412



>gb|DR047767.1|DR047767 RTBOR1_3_H04.b1_A029 Roots plus added boron Pinus taeda cDNA clone
           RTBOR1_3_H04_A029 3', mRNA sequence
          Length = 744

 Score =  116 bits (247), Expect = 3e-025
 Identities = 45/82 (54%), Positives = 57/82 (69%)
 Frame = +2 / +3

                                                                       
Query: 539 HGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFRVNEYSIQAVFFFVCINLQIX 718
           HGL DGPYW+I+Y YFL LS +YM+ F+ FGS +GL FFR+N+YSIQ VF+F+ INLQI 
Sbjct: 3   HGLGDGPYWIITYGYFLVLSXIYMVCFVGFGSAVGLKFFRLNDYSIQIVFYFIYINLQIA 182

                                 
Query: 719 XXXXXXXXXXXGKMATGMGYMY 784
                       K AT +GY+Y
Sbjct: 183 LGFLAANAFSDVKTATVVGYLY 248



  Database: Pinus_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:45 PM
  Number of letters in database: 217,277,237
  Number of sequences in database:  355,925
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 437,915,399
Number of Sequences: 355925
Number of extensions: 6162796
Number of successful extensions: 41987
Number of sequences better than 1.0e-020: 3
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 11322705450
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)