TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBS9a01.xg.2.1
(480 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR050898.1|DR050898 RTBOR1_26_H05.b1_A029 Roots plus add... 135 2e-031
gb|CO172303.1|CO172303 NDL1_28_G10.g1_A029 Needles control ... 119 1e-026
gb|DR071883.1|DR071883 RTDK1_22_E02.g1_A029 Roots, dark Pin... 119 1e-026
gb|DR694707.1|DR694707 EST1084799 Normalized pine embryo li... 119 1e-026
gb|DT638995.1|DT638995 EST1153926 Normalized pine embryo li... 119 1e-026
gb|AY356372.1| Pinus taeda R2R3-MYB transcription factor (M... 119 1e-026
gb|BQ290999.1|BQ290999 NXRV054_D07_F NXRV (Nsf Xylem Root w... 116 1e-025
gb|BQ634727.1|BQ634727 NXRV072_E09_F NXRV (Nsf Xylem Root w... 115 2e-025
gb|DR744198.1|DR744198 RTCU1_20_G08.g1_A029 Roots plus adde... 111 2e-024
gb|CF477905.1|CF477905 RTWW3_13_C03.g1_A022 Well-watered lo... 111 3e-024
gb|DR117421.1|DR117421 RTMG1_6_G12.g1_A029 Roots minus magn... 110 6e-024
gb|DR117678.1|DR117678 RTMG1_8_A10.g1_A029 Roots minus magn... 110 6e-024
gb|CF390133.1|CF390133 RTDR2_12_C07.g1_A021 Loblolly pine r... 95 2e-023
gb|DR117679.1|DR117679 RTMG1_8_A11.g1_A029 Roots minus magn... 108 2e-023
gb|DR685654.1|DR685654 EST1075731 Normalized pine embryo li... 108 3e-023
gb|CO173370.1|CO173370 NDL1_35_F03.g1_A029 Needles control ... 107 4e-023
gb|DR101544.1|DR101544 STRR1_74_C02.b1_A033 Stem Response R... 107 4e-023
gb|DR101609.1|DR101609 STRR1_74_C02.g1_A033 Stem Response R... 107 4e-023
gb|DR111301.1|DR111301 RTS1_16_F03.g1_A029 Roots minus sulf... 107 4e-023
gb|CF387233.1|CF387233 RTDR1_11_B07.g1_A015 Loblolly pine r... 106 7e-023
gb|DR117116.1|DR117116 RTMG1_4_G10.g1_A029 Roots minus magn... 106 7e-023
gb|DR161238.1|DR161238 RTFE1_10_D10.g1_A029 Roots minus iro... 106 7e-023
gb|CF385274.1|CF385274 RTDR1_2_D01.g1_A015 Loblolly pine ro... 106 1e-022
gb|CF388652.1|CF388652 RTDR2_4_A10.g1_A021 Loblolly pine ro... 106 1e-022
gb|CF389081.1|CF389081 RTDR2_13_A10.g1_A021 Loblolly pine r... 106 1e-022
gb|CF400460.1|CF400460 RTWW1_5_H12.g1_A015 Well-watered lob... 106 1e-022
gb|CF401736.1|CF401736 RTWW1_14_C05.g1_A015 Well-watered lo... 106 1e-022
gb|CF402623.1|CF402623 RTWW1_21_B11.g1_A015 Well-watered lo... 106 1e-022
gb|CF665728.1|CF665728 RTCNT1_18_C05.b1_A029 Root control P... 106 1e-022
gb|CF669490.1|CF669490 RTCNT1_44_A10.b1_A029 Root control P... 106 1e-022
gb|BX679906.1|BX679906 BX679906 RS Pinus pinaster cDNA clon... 106 1e-022
gb|BX680288.1|BX680288 BX680288 RS Pinus pinaster cDNA clon... 106 1e-022
gb|CO162411.1|CO162411 FLD1_35_D02.b1_A029 Root flooded Pin... 106 1e-022
gb|CO198121.1|CO198121 GEO1_11_A02.g1_A029 Root gravitropis... 106 1e-022
gb|CO361315.1|CO361315 NDL2_4_D03.b1_A029 Needles control 2... 106 1e-022
gb|CO361397.1|CO361397 NDL2_4_D03.g1_A029 Needles control 2... 106 1e-022
gb|CV034082.1|CV034082 RTNACL1_38_B11.g1_A029 Roots plus ad... 106 1e-022
gb|CX646616.1|CX646616 COLD1_10_A05.g1_A029 Root cold Pinus... 106 1e-022
gb|CX648418.1|CX648418 COLD1_28_B12.g1_A029 Root cold Pinus... 106 1e-022
gb|DR057958.1|DR057958 RTNIT1_8_G05.g1_A029 Roots minus nit... 106 1e-022
gb|DR079868.1|DR079868 RTFEPL1_18_F11.b1_A029 Roots plus ad... 106 1e-022
gb|DR079932.1|DR079932 RTFEPL1_18_F11.g1_A029 Roots plus ad... 106 1e-022
gb|DR111427.1|DR111427 RTS1_17_F02.g1_A029 Roots minus sulf... 106 1e-022
gb|DR168212.1|DR168212 RTPHOS1_23_H12.g1_A029 Roots minus p... 106 1e-022
gb|DR178268.1|DR178268 RTMNUT1_10_C01.g1_A029 Roots minus m... 106 1e-022
gb|DR179654.1|DR179654 RTMNUT1_23_B05.g2_A029 Roots minus m... 106 1e-022
gb|DR387764.1|DR387764 RTHG1_24_A11.b1_A029 Roots plus adde... 106 1e-022
gb|DR387774.1|DR387774 RTHG1_24_B11.b1_A029 Roots plus adde... 106 1e-022
gb|CF667523.1|CF667523 RTCNT1_30_H07.g1_A029 Root control P... 106 1e-022
gb|BX784172.1|BX784172 BX784172 Pinus pinaster differenciat... 106 1e-022
gb|CO200901.1|CO200901 RTCNT2_2_G06.b1_A029 Root control 2 ... 105 3e-022
gb|DR167833.1|DR167833 RTPHOS1_21_A06.g1_A029 Roots minus p... 105 3e-022
gb|BX250447.1|BX250447 BX250447 Pinus pinaster differenciat... 104 3e-022
gb|CF387084.1|CF387084 RTDR1_10_E10.g1_A015 Loblolly pine r... 104 3e-022
gb|CF388213.1|CF388213 RTDR2_1_B07.g1_A021 Loblolly pine ro... 104 3e-022
gb|CF401126.1|CF401126 RTWW1_10_H02.b1_A015 Well-watered lo... 104 3e-022
gb|BX681391.1|BX681391 BX681391 RS Pinus pinaster cDNA clon... 104 3e-022
gb|CX650454.1|CX650454 COLD1_45_F10.g1_A029 Root cold Pinus... 104 3e-022
gb|DR024153.1|DR024153 STRS1_62_E05.g1_A034 Shoot tip pitch... 104 3e-022
gb|DR060728.1|DR060728 RTNIT1_29_D06.g1_A029 Roots minus ni... 104 3e-022
gb|DR111240.1|DR111240 RTS1_16_G05.b1_A029 Roots minus sulf... 104 3e-022
gb|DR694473.1|DR694473 EST1084565 Normalized pine embryo li... 104 3e-022
gb|DT638742.1|DT638742 EST1153673 Normalized pine embryo li... 104 3e-022
gb|CF393225.1|CF393225 RTDR3_17_D12.g1_A022 Loblolly pine r... 103 7e-022
gb|CF472757.1|CF472757 RTDS1_11_D09.g1_A015 Drought-stresse... 103 7e-022
gb|CO162486.1|CO162486 FLD1_35_D02.g1_A029 Root flooded Pin... 103 7e-022
gb|CO365658.1|CO365658 RTK1_18_A01.g1_A029 Roots minus pota... 103 7e-022
gb|CO367106.1|CO367106 RTK1_32_E03.b1_A029 Roots minus pota... 103 7e-022
gb|CO367178.1|CO367178 RTK1_32_E03.g1_A029 Roots minus pota... 103 7e-022
gb|DR011035.1|DR011035 HEAT1_3_A03.b1_A029 Root at 37 C for... 103 7e-022
gb|DR014928.1|DR014928 HEAT1_52_A11.g1_A029 Root at 37 C fo... 103 7e-022
gb|DR023090.1|DR023090 STRS1_55_A05.g1_A034 Shoot tip pitch... 103 7e-022
gb|DR059765.1|DR059765 RTNIT1_19_D08.g1_A029 Roots minus ni... 103 7e-022
gb|DR099337.1|DR099337 STRR1_54_G08.g1_A033 Stem Response R... 103 7e-022
gb|DR161451.1|DR161451 RTFE1_11_H03.g1_A029 Roots minus iro... 103 7e-022
gb|DR164052.1|DR164052 RTFE1_46_B11.g1_A029 Roots minus iro... 103 7e-022
gb|AW011253.1|AW011253 ST18F02 Pine TriplEx shoot tip libra... 103 9e-022
gb|AY356371.1| Pinus taeda R2R3-MYB transcription factor (M... 102 1e-021
gb|CO361899.1|CO361899 NDL2_7_G04.g1_A029 Needles control 2... 102 2e-021
gb|BE241255.1|BE241255 NXNV_183_D12_F Nsf Xylem Normal wood... 101 2e-021
gb|DR015297.1|DR015297 STRS1_2_D10.g1_A034 Shoot tip pitch ... 101 3e-021
gb|DR161095.1|DR161095 RTFE1_9_G03.g1_A029 Roots minus iron... 101 3e-021
gb|BF517838.1|BF517838 NXSI_027_G09_F NXSI (Nsf Xylem Side ... 100 6e-021
gb|CX648339.1|CX648339 COLD1_28_B12.b1_A029 Root cold Pinus... 100 6e-021
gb|CF395899.1|CF395899 RTDS2_19_G06.g1_A021 Drought-stresse... 100 8e-021
gb|CO201585.1|CO201585 RTCNT2_6_F07.g1_A029 Root control 2 ... 100 8e-021
gb|DR163874.1|DR163874 RTFE1_45_A12.g1_A029 Roots minus iro... 100 8e-021
gb|DR052727.1|DR052727 RTCA1_6_B03.g1_A029 Roots minus calc... 100 1e-020
gb|CF396247.1|CF396247 RTDS2_15_B11.g1_A021 Drought-stresse... 82 1e-020
gb|CO366297.1|CO366297 RTK1_27_B09.b1_A029 Roots minus pota... 99 2e-020
gb|DR167765.1|DR167765 RTPHOS1_20_H05.g1_A029 Roots minus p... 99 2e-020
gb|CO173249.1|CO173249 NDL1_35_A08.b1_A029 Needles control ... 98 4e-020
gb|CO173319.1|CO173319 NDL1_35_A08.g1_A029 Needles control ... 98 4e-020
gb|CO164542.1|CO164542 FLD1_48_E08.g1_A029 Root flooded Pin... 98 5e-020
gb|CF667045.1|CF667045 RTCNT1_27_G11.g1_A029 Root control P... 97 7e-020
gb|DR014691.1|DR014691 HEAT1_51_B07.b1_A029 Root at 37 C fo... 97 7e-020
gb|DR014768.1|DR014768 HEAT1_51_B07.g1_A029 Root at 37 C fo... 97 7e-020
gb|DR017577.1|DR017577 STRS1_17_E03.b1_A034 Shoot tip pitch... 97 7e-020
gb|DR017658.1|DR017658 STRS1_17_E03.g1_A034 Shoot tip pitch... 97 7e-020
gb|CX647457.1|CX647457 COLD1_16_B04.g1_A029 Root cold Pinus... 95 3e-019
gb|CF391376.1|CF391376 RTDR3_1_G04.g1_A022 Loblolly pine ro... 94 6e-019
gb|BQ701670.1|BQ701670 NXSI_118_C02_F NXSI (Nsf Xylem Side ... 93 8e-019
gb|CO361758.1|CO361758 NDL2_6_H01.g1_A029 Needles control 2... 76 9e-019
gb|CO162972.1|CO162972 FLD1_38_D09.g1_A029 Root flooded Pin... 92 2e-018
gb|CO163969.1|CO163969 FLD1_45_A11.b1_A029 Root flooded Pin... 92 2e-018
gb|DR167893.1|DR167893 RTPHOS1_21_G02.g1_A029 Roots minus p... 92 2e-018
gb|DR746217.1|DR746217 RTCU1_35_B06.g1_A029 Roots plus adde... 92 3e-018
gb|DR055413.1|DR055413 RTCA1_23_C03.g2_A029 Roots minus cal... 91 5e-018
gb|CF403056.1|CF403056 RTWW1_24_G08.g1_A015 Well-watered lo... 90 1e-017
gb|CV034623.1|CV034623 RTNACL1_10_A11.g1_A029 Roots plus ad... 89 1e-017
gb|DR177927.1|DR177927 RTMNUT1_8_E11.b1_A029 Roots minus mi... 89 2e-017
gb|CF395399.1|CF395399 RTDS2_11_H08.g1_A021 Drought-stresse... 88 3e-017
gb|CF397637.1|CF397637 RTDS3_4_A07.g1_A022 Drought-stressed... 88 5e-017
gb|DR167401.1|DR167401 RTPHOS1_18_C09.g1_A029 Roots minus p... 86 1e-016
gb|CF667292.1|CF667292 RTCNT1_29_G02.b1_A029 Root control P... 85 2e-016
gb|DR015810.1|DR015810 STRS1_5_F07.g1_A034 Shoot tip pitch ... 85 2e-016
gb|CF671993.1|CF671993 RTCNT1_60_D02.g1_A029 Root control P... 85 3e-016
gb|CO158547.1|CO158547 FLD1_7_D03.g1_A029 Root flooded Pinu... 84 6e-016
gb|CO164694.1|CO164694 FLD1_49_E04.g1_A029 Root flooded Pin... 84 6e-016
gb|DR051127.1|DR051127 RTBOR1_27_G08.g1_A029 Roots plus add... 84 6e-016
gb|DR683147.1|DR683147 EST1073223 Normalized pine embryo li... 84 6e-016
gb|DT631233.1|DT631233 EST1146164 Normalized pine embryo li... 84 6e-016
gb|CN852309.1|CN852309 Pi148-1 Salicylate-treated slash pin... 84 8e-016
gb|CX646566.1|CX646566 COLD1_10_D06.b1_A029 Root cold Pinus... 84 8e-016
gb|DR015700.1|DR015700 STRS1_5_D02.b1_A034 Shoot tip pitch ... 83 1e-015
gb|CO176256.1|CO176256 NDL1_60_G12.g1_A029 Needles control ... 83 1e-015
gb|DR120088.1|DR120088 RTMG1_27_A10.g2_A029 Roots minus mag... 83 1e-015
gb|BX000680.1|BX000680 BX000680 Pinus pinaster xylem Pinus ... 82 2e-015
gb|CF398623.1|CF398623 RTDS3_13_E02.b1_A022 Drought-stresse... 82 2e-015
gb|CF474496.1|CF474496 RTWW2_9_D02.b1_A021 Well-watered lob... 82 2e-015
gb|CO362169.1|CO362169 RTK1_1_F07.g1_A029 Roots minus potas... 82 2e-015
gb|CO368386.1|CO368386 RTK1_40_G08.b1_A029 Roots minus pota... 82 2e-015
gb|CF391868.1|CF391868 RTDR3_10_B04.g1_A022 Loblolly pine r... 82 3e-015
gb|CF395727.1|CF395727 RTDS2_16_B07.g1_A021 Drought-stresse... 82 3e-015
gb|CF397272.1|CF397272 RTDS3_2_C01.g1_A022 Drought-stressed... 82 3e-015
gb|CF668816.1|CF668816 RTCNT1_38_G11.g1_A029 Root control P... 82 3e-015
gb|CO361388.1|CO361388 NDL2_4_C06.g1_A029 Needles control 2... 82 3e-015
gb|DR069928.1|DR069928 RTDK1_10_F06.b1_A029 Roots, dark Pin... 82 3e-015
gb|DR072123.1|DR072123 RTDK1_24_F01.b1_A029 Roots, dark Pin... 82 3e-015
gb|DR094442.1|DR094442 STRR1_14_D03.g1_A033 Stem Response R... 82 3e-015
gb|DR386158.1|DR386158 RTHG1_13_G03.b1_A029 Roots plus adde... 82 3e-015
gb|DR694940.1|DR694940 EST1085033 Normalized pine embryo li... 82 3e-015
gb|DT639133.1|DT639133 EST1154064 Normalized pine embryo li... 82 3e-015
gb|CV034016.1|CV034016 RTNACL1_38_B11.b1_A029 Roots plus ad... 81 5e-015
gb|DR686505.1|DR686505 EST1076583 Normalized pine embryo li... 80 7e-015
gb|DT633408.1|DT633408 EST1148339 Normalized pine embryo li... 80 7e-015
gb|DR016585.1|DR016585 STRS1_11_A12.b1_A034 Shoot tip pitch... 68 8e-015
gb|BE520012.1|BE520012 NXCI_028_B03_F NXCI (Nsf Xylem Compr... 80 9e-015
gb|DR686108.1|DR686108 EST1076186 Normalized pine embryo li... 80 9e-015
gb|DR744906.1|DR744906 RTCU1_25_E06.g1_A029 Roots plus adde... 80 9e-015
gb|DT633531.1|DT633531 EST1148462 Normalized pine embryo li... 80 9e-015
gb|DR386238.1|DR386238 RTHG1_13_G03.g1_A029 Roots plus adde... 80 1e-014
gb|AW064634.1|AW064634 ST33H05 Pine TriplEx shoot tip libra... 79 2e-014
gb|CF396536.1|CF396536 RTDS2_22_H07.g1_A021 Drought-stresse... 79 2e-014
gb|CF399612.1|CF399612 RTDS3_26_H01.g1_A022 Drought-stresse... 79 2e-014
gb|CF470618.1|CF470618 RTDS1_13_H10.g1_A015 Drought-stresse... 79 2e-014
gb|CO170303.1|CO170303 NDL1_13_D05.b1_A029 Needles control ... 79 2e-014
gb|DR058733.1|DR058733 RTNIT1_13_C07.g1_A029 Roots minus ni... 79 2e-014
gb|DR098778.1|DR098778 STRR1_47_G01.g1_A033 Stem Response R... 79 2e-014
gb|AW065119.1|AW065119 ST39H05 Pine TriplEx shoot tip libra... 79 2e-014
gb|DR059561.1|DR059561 RTNIT1_18_A02.g1_A029 Roots minus ni... 79 2e-014
gb|DR081462.1|DR081462 RTFEPL1_29_G04.g1_A029 Roots plus ad... 79 2e-014
gb|DR109956.1|DR109956 RTS1_1_B02.b1_A029 Roots minus sulfu... 79 2e-014
gb|DR683171.1|DR683171 EST1073247 Normalized pine embryo li... 79 2e-014
gb|DR683172.1|DR683172 EST1073248 Normalized pine embryo li... 79 2e-014
gb|DT631296.1|DT631296 EST1146227 Normalized pine embryo li... 79 2e-014
gb|CF391408.1|CF391408 RTDR3_1_E10.g1_A022 Loblolly pine ro... 78 3e-014
gb|CF394327.1|CF394327 RTDS2_4_B08.g1_A021 Drought-stressed... 78 3e-014
gb|CO367346.1|CO367346 RTK1_33_F05.g1_A029 Roots minus pota... 78 3e-014
gb|DR057870.1|DR057870 RTNIT1_8_G05.b1_A029 Roots minus nit... 78 3e-014
gb|DR384384.1|DR384384 RTHG1_1_H06.g1_A029 Roots plus added... 78 3e-014
gb|DR384689.1|DR384689 RTHG1_3_H06.g1_A029 Roots plus added... 78 3e-014
gb|CF396041.1|CF396041 RTDS2_20_C12.g1_A021 Drought-stresse... 78 4e-014
gb|DR020641.1|DR020641 STRS1_38_G12.b1_A034 Shoot tip pitch... 78 4e-014
gb|DR020720.1|DR020720 STRS1_38_G12.g1_A034 Shoot tip pitch... 78 4e-014
gb|DR110104.1|DR110104 RTS1_8_C03.g1_A029 Roots minus sulfu... 77 6e-014
gb|DR016667.1|DR016667 STRS1_11_A12.g1_A034 Shoot tip pitch... 68 1e-013
gb|CO361678.1|CO361678 NDL2_6_H01.b1_A029 Needles control 2... 76 2e-013
gb|CO368639.1|CO368639 RTK1_41_H02.g1_A029 Roots minus pota... 75 3e-013
gb|DR015783.1|DR015783 STRS1_5_D02.g1_A034 Shoot tip pitch ... 75 4e-013
gb|AI725044.1|AI725044 943 PtIFG2 Pinus taeda cDNA clone 88... 74 5e-013
gb|CF478238.1|CF478238 RTWW3_19_H07.g1_A022 Well-watered lo... 74 7e-013
gb|CO175228.1|CO175228 NDL1_53_H05.b1_A029 Needles control ... 74 7e-013
gb|CV033497.1|CV033497 RTNACL1_34_H05.g1_A029 Roots plus ad... 72 2e-012
gb|CV035967.1|CV035967 RTNACL1_43_E10.g1_A029 Roots plus ad... 72 2e-012
gb|DR089238.1|DR089238 RTAL1_7_A05.g1_A029 Roots plus added... 72 2e-012
gb|DR384837.1|DR384837 RTHG1_4_H08.g1_A029 Roots plus added... 72 2e-012
gb|DR096412.1|DR096412 STRR1_27_G02.g1_A033 Stem Response R... 72 2e-012
gb|DR023047.1|DR023047 STRS1_55_D09.b1_A034 Shoot tip pitch... 72 3e-012
gb|AW065064.1|AW065064 ST39B10 Pine TriplEx shoot tip libra... 71 6e-012
gb|DR111182.1|DR111182 RTS1_16_A02.b1_A029 Roots minus sulf... 71 6e-012
gb|CF393923.1|CF393923 RTDS2_2_G07.b1_A021 Drought-stressed... 69 2e-011
gb|CO200971.1|CO200971 RTCNT2_2_F10.g1_A029 Root control 2 ... 69 2e-011
gb|CF663690.1|CF663690 RTCNT1_4_C02.g1_A029 Root control Pi... 68 4e-011
gb|CF475091.1|CF475091 RTWW2_5_F10.g1_A021 Well-watered lob... 55 5e-011
gb|CX646534.1|CX646534 COLD1_10_A05.b1_A029 Root cold Pinus... 67 8e-011
gb|DR690028.1|DR690028 EST1080114 Normalized pine embryo li... 54 1e-010
gb|DT635793.1|DT635793 EST1150724 Normalized pine embryo li... 54 1e-010
gb|DR098178.1|DR098178 STRR1_39_D04.g1_A033 Stem Response R... 66 1e-010
gb|DR016135.1|DR016135 STRS1_7_H08.g1_A034 Shoot tip pitch ... 52 3e-010
gb|CF386912.1|CF386912 RTDR1_9_D07.g1_A015 Loblolly pine ro... 64 7e-010
gb|CF396127.1|CF396127 RTDS2_13_D06.g1_A021 Drought-stresse... 64 7e-010
gb|CF663743.1|CF663743 RTCNT1_4_H05.g1_A029 Root control Pi... 64 7e-010
gb|CF669684.1|CF669684 RTCNT1_45_A07.g1_A029 Root control P... 64 7e-010
gb|CF672556.1|CF672556 RTCNT1_64_A03.g1_A029 Root control P... 64 7e-010
gb|CO364221.1|CO364221 RTK1_14_A05.g1_A029 Roots minus pota... 64 7e-010
gb|CO366361.1|CO366361 RTK1_27_A03.g1_A029 Roots minus pota... 64 7e-010
gb|CV139163.1|CV139163 EST850372 Sequencing ESTs from loblo... 64 7e-010
gb|DR013838.1|DR013838 HEAT1_21_G09.g1_A029 Root at 37 C fo... 64 7e-010
gb|DR024798.1|DR024798 STRS1_67_B12.g1_A034 Shoot tip pitch... 64 7e-010
gb|DR024941.1|DR024941 STRS1_68_B11.g1_A034 Shoot tip pitch... 64 7e-010
gb|DR050127.1|DR050127 RTBOR1_21_A09.g1_A029 Roots plus add... 64 7e-010
gb|DR089099.1|DR089099 RTAL1_6_B11.g1_A029 Roots plus added... 64 7e-010
gb|DT626587.1|DT626587 EST1158511 Sequencing ESTs from lobl... 64 7e-010
gb|DR096185.1|DR096185 STRR1_26_G11.b1_A033 Stem Response R... 63 9e-010
gb|CF470509.1|CF470509 RTDS1_13_H10.b1_A015 Drought-stresse... 63 1e-009
gb|CF476017.1|CF476017 RTWW2_16_B11.g1_A021 Well-watered lo... 62 2e-009
gb|CN783895.1|CN783895 EST782586 Sequencing ESTs from loblo... 62 2e-009
gb|CO411548.1|CO411548 EST841933 Sequencing ESTs from loblo... 62 2e-009
gb|CO412408.1|CO412408 EST842793 Sequencing ESTs from loblo... 62 2e-009
gb|CO414624.1|CO414624 EST845009 Sequencing ESTs from loblo... 62 2e-009
gb|CV135175.1|CV135175 EST846384 Sequencing ESTs from loblo... 62 2e-009
gb|CV136199.1|CV136199 EST847408 Sequencing ESTs from loblo... 62 2e-009
gb|DN447482.1|DN447482 EST943281 Sequencing ESTs from loblo... 62 2e-009
gb|DN452317.1|DN452317 EST948116 Sequencing ESTs from loblo... 62 2e-009
gb|DN455288.1|DN455288 EST951087 Sequencing ESTs from loblo... 62 2e-009
gb|DN456471.1|DN456471 EST952270 Sequencing ESTs from loblo... 62 2e-009
gb|DN458982.1|DN458982 EST954781 Sequencing ESTs from loblo... 62 2e-009
gb|DN463709.1|DN463709 EST959508 Sequencing ESTs from loblo... 62 2e-009
gb|DN464734.1|DN464734 EST960533 Sequencing ESTs from loblo... 62 2e-009
gb|DR099264.1|DR099264 STRR1_54_G08.b1_A033 Stem Response R... 62 2e-009
gb|DT626735.1|DT626735 EST1159811 Sequencing ESTs from lobl... 62 2e-009
gb|DT627526.1|DT627526 EST1160602 Sequencing ESTs from lobl... 62 2e-009
gb|BX680071.1|BX680071 BX680071 RS Pinus pinaster cDNA clon... 62 3e-009
gb|DR011876.1|DR011876 HEAT1_8_B02.g1_A029 Root at 37 C for... 62 3e-009
gb|DR015213.1|DR015213 STRS1_2_D10.b1_A034 Shoot tip pitch ... 62 3e-009
gb|DR101912.1|DR101912 STRR1_76_E01.g1_A033 Stem Response R... 61 4e-009
gb|BX678005.1|BX678005 BX678005 RN Pinus pinaster cDNA clon... 60 8e-009
gb|CN783759.1|CN783759 EST782450 Sequencing ESTs from loblo... 60 8e-009
gb|CV138259.1|CV138259 EST849468 Sequencing ESTs from loblo... 60 8e-009
gb|DN448288.1|DN448288 EST944087 Sequencing ESTs from loblo... 60 8e-009
gb|DN463162.1|DN463162 EST958961 Sequencing ESTs from loblo... 60 8e-009
gb|DR014845.1|DR014845 HEAT1_52_A11.b1_A029 Root at 37 C fo... 60 8e-009
gb|DT625580.1|DT625580 EST1157504 Sequencing ESTs from lobl... 60 8e-009
gb|DT624539.1|DT624539 EST1158826 Sequencing ESTs from lobl... 60 8e-009
gb|BQ697390.1|BQ697390 NXPV_053_G01_F NXPV (Nsf Xylem Plani... 60 1e-008
gb|BQ701199.1|BQ701199 NXSI_023_G01_F NXSI (Nsf Xylem Side ... 59 2e-008
gb|CO165016.1|CO165016 FLD1_51_F09.g1_A029 Root flooded Pin... 59 2e-008
gb|CF392063.1|CF392063 RTDR3_12_C02.g1_A022 Loblolly pine r... 53 2e-008
gb|DR161362.1|DR161362 RTFE1_11_H03.b1_A029 Roots minus iro... 59 3e-008
gb|DR094280.1|DR094280 STRR1_13_C10.g1_A033 Stem Response R... 58 4e-008
gb|DR120873.1|DR120873 RTMG1_32_B08.g1_A029 Roots minus mag... 58 4e-008
gb|DR167601.1|DR167601 RTPHOS1_19_G10.g1_A029 Roots minus p... 58 4e-008
gb|CF386859.1|CF386859 RTDR1_9_D11.b1_A015 Loblolly pine ro... 58 5e-008
gb|DR120011.1|DR120011 RTMG1_27_A10.b1_A029 Roots minus mag... 57 7e-008
gb|DR092612.1|DR092612 STRR1_2_B11.g1_A033 Stem Response Re... 55 2e-007
gb|DR117333.1|DR117333 RTMG1_6_G12.b1_A029 Roots minus magn... 55 2e-007
gb|BF609979.1|BF609979 NXSI_053_C11_F NXSI (Nsf Xylem Side ... 54 4e-007
gb|CX647021.1|CX647021 COLD1_13_A07.b1_A029 Root cold Pinus... 53 1e-006
gb|DR052055.1|DR052055 RTCA1_2_D08.b1_A029 Roots minus calc... 53 1e-006
gb|DR052135.1|DR052135 RTCA1_2_D08.g1_A029 Roots minus calc... 53 1e-006
gb|DR052207.1|DR052207 RTCA1_3_C09.b1_A029 Roots minus calc... 53 1e-006
gb|DR052278.1|DR052278 RTCA1_3_C09.g1_A029 Roots minus calc... 53 1e-006
gb|DR692411.1|DR692411 EST1082499 Normalized pine embryo li... 53 2e-006
gb|DT637439.1|DT637439 EST1152370 Normalized pine embryo li... 53 2e-006
gb|AL750032.1|AL750032 AL750032 AS Pinus pinaster cDNA clon... 52 2e-006
gb|AL750151.1|AL750151 AL750151 AS Pinus pinaster cDNA clon... 52 2e-006
gb|BF610487.1|BF610487 NXSI_059_A09_F NXSI (Nsf Xylem Side ... 52 3e-006
gb|BX667586.1|BX667586 BX667586 RN Pinus pinaster cDNA clon... 50 1e-005
gb|BG319341.1|BG319341 NXPV_026_G12_F NXPV (Nsf Xylem Plani... 49 3e-005
gb|CF393224.1|CF393224 RTDR3_17_B01.g1_A022 Loblolly pine r... 49 3e-005
gb|BE451890.1|BE451890 NXCI_004_G10_F NXCI (Nsf Xylem Compr... 48 3e-005
gb|BF186052.1|BF186052 NXCI_132_E09_F NXCI (Nsf Xylem Compr... 48 3e-005
gb|CD016573.1|CD016573 NXCI_051_A04_F NXCI (Nsf Xylem Compr... 48 3e-005
gb|CF398912.1|CF398912 RTDS3_11_F06.b1_A022 Drought-stresse... 47 6e-005
gb|CF477238.1|CF477238 RTWW3_6_E02.g1_A022 Well-watered lob... 46 1e-004
gb|BV079719.1| Pp_Pp2 Pinus pinaster megagametophytes Pinus... 46 1e-004
gb|BQ703169.1|BQ703169 NXSI_137_D03_F NXSI (Nsf Xylem Side ... 46 2e-004
gb|DT632905.1|DT632905 EST1147836 Normalized pine embryo li... 46 2e-004
gb|AW226481.1|AW226481 ST82H01 Pine TriplEx shoot tip libra... 45 3e-004
gb|AW064812.1|AW064812 ST36A12 Pine TriplEx shoot tip libra... 43 0.001
gb|DN630652.1|DN630652 EST981468 Subtracted pine embryo lib... 43 0.001
gb|DT630347.1|DT630347 EST1154759 Subtracted pine embryo li... 43 0.001
gb|CX651169.1|CX651169 COLD1_50_D03.g1_A029 Root cold Pinus... 42 0.002
gb|DR162691.1|DR162691 RTFE1_19_C08.g1_A029 Roots minus iro... 42 0.002
gb|CO362724.1|CO362724 RTK1_5_A02.g1_A029 Roots minus potas... 40 0.009
gb|DR686482.1|DR686482 EST1076560 Normalized pine embryo li... 40 0.009
gb|CV034962.1|CV034962 RTNACL1_12_F05.g1_A029 Roots plus ad... 40 0.013
gb|CX714163.1|CX714163 RTPQ1_18_D03.g1_A032 Roots treated w... 40 0.013
gb|CV034559.1|CV034559 RTNACL1_10_A11.b1_A029 Roots plus ad... 39 0.017
gb|DR179574.1|DR179574 RTMNUT1_23_B05.b2_A029 Roots minus m... 39 0.024
gb|CO164762.1|CO164762 FLD1_50_D06.b1_A029 Root flooded Pin... 38 0.027
gb|CO164837.1|CO164837 FLD1_50_D06.g1_A029 Root flooded Pin... 38 0.027
gb|DN449894.1|DN449894 EST945693 Sequencing ESTs from loblo... 38 0.027
gb|DN457591.1|DN457591 EST953390 Sequencing ESTs from loblo... 38 0.027
gb|DN463736.1|DN463736 EST959535 Sequencing ESTs from loblo... 38 0.027
gb|DR054763.1|DR054763 RTCA1_19_A07.g1_A029 Roots minus cal... 38 0.027
gb|DR099228.1|DR099228 STRR1_54_C02.b1_A033 Stem Response R... 38 0.027
gb|DR099296.1|DR099296 STRR1_54_C02.g1_A033 Stem Response R... 38 0.027
gb|DT626558.1|DT626558 EST1158482 Sequencing ESTs from lobl... 38 0.027
gb|DT626751.1|DT626751 EST1159827 Sequencing ESTs from lobl... 38 0.027
gb|BF169447.1|BF169447 NXCI_121_F06_F NXCI (Nsf Xylem Compr... 38 0.027
gb|BF221125.1|BF221125 NXCI_163_F11_F NXCI (Nsf Xylem Compr... 38 0.027
gb|BF778142.1|BF778142 NXSI_077_F06_F NXSI (Nsf Xylem Side ... 38 0.027
gb|CF472904.1|CF472904 RTDS1_12_G03.g1_A015 Drought-stresse... 37 0.036
gb|DR054697.1|DR054697 RTCA1_19_A07.b1_A029 Roots minus cal... 37 0.036
gb|BX679518.1|BX679518 BX679518 RS Pinus pinaster cDNA clon... 37 0.060
gb|BF777458.1|BF777458 NXSI_071_G12_F NXSI (Nsf Xylem Side ... 36 0.13
gb|CD023829.1|CD023829 NXRV_010_G10_F NXRV (Nsf Xylem Root ... 36 0.13
gb|CF392981.1|CF392981 RTDR3_18_A12.b1_A022 Loblolly pine r... 36 0.13
gb|CF471801.1|CF471801 RTDS1_6_C04.g1_A015 Drought-stressed... 36 0.13
gb|DN608801.1|DN608801 EST961851 Subtracted pine embryo lib... 34 0.46
gb|DN609910.1|DN609910 EST962960 Subtracted pine embryo lib... 34 0.46
gb|BX250138.1|BX250138 BX250138 Pinus pinaster differenciat... 33 0.63
gb|CF470396.1|CF470396 RTDS1_17_E08.b1_A015 Drought-stresse... 33 0.63
gb|CF470479.1|CF470479 RTDS1_17_E08.g1_A015 Drought-stresse... 33 0.63
gb|BX667557.1|BX667557 BX667557 RN Pinus pinaster cDNA clon... 33 0.63
gb|CN784965.1|CN784965 EST783656 Sequencing ESTs from loblo... 33 0.63
gb|CN785589.1|CN785589 EST784280 Sequencing ESTs from loblo... 33 0.63
gb|CO414400.1|CO414400 EST844785 Sequencing ESTs from loblo... 33 0.63
gb|CV134123.1|CV134123 EST845332 Sequencing ESTs from loblo... 33 0.63
gb|CV147023.1|CV147023 EST858232 Sequencing ESTs from loblo... 33 0.63
gb|CV147082.1|CV147082 EST858291 Sequencing ESTs from loblo... 33 0.63
gb|DN449116.1|DN449116 EST944915 Sequencing ESTs from loblo... 33 0.63
gb|DN453680.1|DN453680 EST949479 Sequencing ESTs from loblo... 33 0.63
gb|DN456735.1|DN456735 EST952534 Sequencing ESTs from loblo... 33 0.63
gb|DN458859.1|DN458859 EST954658 Sequencing ESTs from loblo... 33 0.63
gb|DN462138.1|DN462138 EST957937 Sequencing ESTs from loblo... 33 0.63
gb|DN463667.1|DN463667 EST959466 Sequencing ESTs from loblo... 33 0.63
gb|DN609187.1|DN609187 EST962237 Subtracted pine embryo lib... 33 0.63
gb|DN609683.1|DN609683 EST962733 Subtracted pine embryo lib... 33 0.63
gb|DN611833.1|DN611833 EST964883 Subtracted pine embryo lib... 33 0.63
gb|DN614968.1|DN614968 EST968018 Subtracted pine embryo lib... 33 0.63
gb|DR071897.1|DR071897 RTDK1_22_F07.g1_A029 Roots, dark Pin... 33 0.63
gb|DR080000.1|DR080000 RTFEPL1_19_A02.g1_A029 Roots plus ad... 34 0.72
gb|CF397183.1|CF397183 RTDS3_2_H10.b2_A022 Drought-stressed... 33 0.87
gb|BX678338.1|BX678338 BX678338 RN Pinus pinaster cDNA clon... 33 0.87
gb|CV135573.1|CV135573 EST846782 Sequencing ESTs from loblo... 33 0.87
gb|DN454568.1|DN454568 EST950367 Sequencing ESTs from loblo... 33 0.87
gb|DN457420.1|DN457420 EST953219 Sequencing ESTs from loblo... 33 0.87
gb|DN458548.1|DN458548 EST954347 Sequencing ESTs from loblo... 33 0.87
gb|DN461340.1|DN461340 EST957139 Sequencing ESTs from loblo... 33 0.87
gb|DN628751.1|DN628751 EST979567 Subtracted pine embryo lib... 33 1.3
gb|DN632216.1|DN632216 EST983032 Subtracted pine embryo lib... 33 1.3
gb|DT629899.1|DT629899 EST1154311 Subtracted pine embryo li... 33 1.3
gb|DT629914.1|DT629914 EST1154326 Subtracted pine embryo li... 33 1.3
gb|DT630385.1|DT630385 EST1154797 Subtracted pine embryo li... 33 1.3
gb|DR180184.1|DR180184 RTMNUT1_27_B03.b1_A029 Roots minus m... 27 1.4
gb|CF393008.1|CF393008 RTDR3_18_A12.g1_A022 Loblolly pine r... 32 1.6
gb|DN448698.1|DN448698 EST944497 Sequencing ESTs from loblo... 32 1.6
gb|DR070780.1|DR070780 RTDK1_15_C03.g1_A029 Roots, dark Pin... 32 1.6
gb|CR393057.1|CR393057 CR393057 RN Pinus pinaster cDNA clon... 31 3.1
gb|DR072202.1|DR072202 RTDK1_24_F01.g1_A029 Roots, dark Pin... 32 3.4
gb|AL750422.1|AL750422 AL750422 RN Pinus pinaster cDNA clon... 31 4.3
gb|BX255480.1|BX255480 BX255480 Pinus pinaster differenciat... 31 4.3
gb|DR052339.1|DR052339 RTCA1_4_B02.b1_A029 Roots minus calc... 31 4.7
gb|DR120145.1|DR120145 RTMG1_27_F12.g2_A029 Roots minus mag... 30 5.9
gb|BX254096.1|BX254096 BX254096 Pinus pinaster differenciat... 30 8.1
gb|BX676982.1|BX676982 BX676982 RN Pinus pinaster cDNA clon... 30 8.1
gb|BX677516.1|BX677516 BX677516 RN Pinus pinaster cDNA clon... 30 8.1
gb|DR118555.1|DR118555 RTMG1_17_F06.g1_A029 Roots minus mag... 30 8.1
gb|CF395696.1|CF395696 RTDS2_16_F12.g1_A021 Drought-stresse... 30 8.7
gb|CX714744.1|CX714744 RTPQ1_26_F02.b1_A032 Roots treated w... 30 8.7
>gb|DR050898.1|DR050898 RTBOR1_26_H05.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_26_H05_A029 3', mRNA sequence
Length = 793
Score = 135 bits (295), Expect = 2e-031
Identities = 52/66 (78%), Positives = 60/66 (90%)
Frame = +1 / -2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+ EE+LI+ELH+VLGNRWSQIA LPGRTDNEIKNLWNSCIKKKLRQ+GIDPNTH+
Sbjct: 498 GTFSPQEENLIVELHSVLGNRWSQIATHLPGRTDNEIKNLWNSCIKKKLRQRGIDPNTHR 319
Query: 184 PLTEAD 201
PL+E +
Sbjct: 318 PLSEVN 301
Score = 101 bits (219), Expect = 9e-022
Identities = 44/64 (68%), Positives = 45/64 (70%)
Frame = -2 / +2
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSW 15
S+ GL VLGSMP CLSFFLMHEF RFLISLSVLPG C AI*DHLFPRT C
Sbjct: 308 SLRGLCVLGSMPRCLSFFLMHEFQRFLISLSVLPGRCVAI*DHLFPRTECSSTMRFSSCG 487
Query: 14 ANAP 3
N P
Sbjct: 488 ENVP 499
Score = 76.0 bits (163), Expect = 5e-014
Identities = 35/65 (53%), Positives = 47/65 (72%)
Frame = -1 / +1
Query: 201 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 22
I L++ V V I A LP+LL +ARVP +LDL+IS Q+ C LRPPVPED +Q ++E+FF
Sbjct: 301 IHLAERPVRVRIYASLPKLLFNARVPEVLDLVISSSGQMCCYLRPPVPED*MQFNNEIFF 480
Query: 21 VLGEC 7
+ EC
Sbjct: 481 LRREC 495
Score = 51.4 bits (108), Expect = 2e-006
Identities = 27/46 (58%), Positives = 34/46 (73%)
Frame = +3 / -1
Query: 60 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY*G 197
EQVVSN + +AR++** DQE +ELVH +EA A RH S H QA+ G
Sbjct: 442 EQVVSNSNTSARKN**RDQEPLELVH*KEA*ATRHRS*HAQASQRG 305
Score = 32.5 bits (66), Expect = 1.2
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = +2 / -3
Query: 80 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPT 181
Q C LI RSR GTRA +RS G +A I T T
Sbjct: 422 QHICPEELITRSRTSGTRALKRSLGNEA*ILTRT 321
>gb|CO172303.1|CO172303 NDL1_28_G10.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_28_G10_A029 5', mRNA sequence
Length = 751
Score = 119 bits (260), Expect = 1e-026
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G ++ EE LII+LHA +GNRWS+IAAQLPGRTDNEIKN WN+ IKKKLRQ GIDP THK
Sbjct: 98 GLLSESEEKLIIDLHAAIGNRWSRIAAQLPGRTDNEIKNYWNTRIKKKLRQMGIDPVTHK 277
Query: 184 PLTE 195
PLT+
Sbjct: 278 PLTQ 289
Score = 78.2 bits (168), Expect = 1e-014
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = -2 / -2
Query: 191 VSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWA 12
V GLWV GS+P SFFL+ F FLISLSVLPG+CAAI DHLFP AC
Sbjct: 285 VRGLWVTGSIPIWRSFFLILVFQ*FLISLSVLPGNCAAIRDHLFPMAACRSMMSFSSDSD 106
Query: 11 NAP 3
N P
Sbjct: 105 NNP 97
Score = 66.1 bits (141), Expect = 5e-011
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -1 / -1
Query: 201 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 28
+ L + LVG I++ L Q LLD RVP ILDL+IS PWQLR + PP+P S+ ++DE+
Sbjct: 295 LHLGERLVGHRIDSHLAQFLLDPRVPVILDLVISSPWQLRSDS*PPIPYGSM*INDEL 122
Score = 41.5 bits (86), Expect = 0.002
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +2 / +3
Query: 83 RSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 184
R+CQG LI RSRI GTR SRR+ R I PTS
Sbjct: 177 RNCQGELITRSRITGTRGSRRNCARWESIL*PTS 278
Score = 35.2 bits (72), Expect = 0.18
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +3 / +1
Query: 60 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY 191
E VV+N A ARE+** DQE +E QEE + + S PQA++
Sbjct: 154 E*VVTNRCAIAREN**RDQELLEHEDQEETAPDGNRSCDPQASH 285
>gb|DR071883.1|DR071883 RTDK1_22_E02.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_22_E02_A029 5', mRNA sequence
Length = 708
Score = 119 bits (260), Expect = 1e-026
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G ++ EE LII+LHA +GNRWS+IAAQLPGRTDNEIKN WN+ IKKKLRQ GIDP THK
Sbjct: 373 GLLSESEEKLIIDLHAAIGNRWSRIAAQLPGRTDNEIKNYWNTRIKKKLRQMGIDPVTHK 552
Query: 184 PLTE 195
PLT+
Sbjct: 553 PLTQ 564
Score = 78.2 bits (168), Expect = 1e-014
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = -2 / -2
Query: 191 VSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWA 12
V GLWV GS+P SFFL+ F FLISLSVLPG+CAAI DHLFP AC
Sbjct: 560 VRGLWVTGSIPIWRSFFLILVFQ*FLISLSVLPGNCAAIRDHLFPMAACRSMMSFSSDSD 381
Query: 11 NAP 3
N P
Sbjct: 380 NNP 372
Score = 66.1 bits (141), Expect = 5e-011
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -1 / -1
Query: 201 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 28
+ L + LVG I++ L Q LLD RVP ILDL+IS PWQLR + PP+P S+ ++DE+
Sbjct: 570 LHLGERLVGHRIDSHLAQFLLDPRVPVILDLVISSPWQLRSDS*PPIPYGSM*INDEL 397
Score = 41.5 bits (86), Expect = 0.002
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +2 / +2
Query: 83 RSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 184
R+CQG LI RSRI GTR SRR+ R I PTS
Sbjct: 452 RNCQGELITRSRITGTRGSRRNCARWESIL*PTS 553
Score = 35.2 bits (72), Expect = 0.18
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +3 / +3
Query: 60 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY 191
E VV+N A ARE+** DQE +E QEE + + S PQA++
Sbjct: 429 E*VVTNRCAIAREN**RDQELLEHEDQEETAPDGNRSCDPQASH 560
>gb|DR694707.1|DR694707 EST1084799 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEF89 3' end, mRNA sequence
Length = 790
Score = 119 bits (260), Expect = 1e-026
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G ++ EE LII+LHA +GNRWS+IAAQLPGRTDNEIKN WN+ IKKKLRQ GIDP THK
Sbjct: 140 GLLSESEEKLIIDLHAAIGNRWSRIAAQLPGRTDNEIKNYWNTRIKKKLRQMGIDPVTHK 319
Query: 184 PLTE 195
PLT+
Sbjct: 320 PLTQ 331
Score = 78.2 bits (168), Expect = 1e-014
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = -2 / -2
Query: 191 VSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWA 12
V GLWV GS+P SFFL+ F FLISLSVLPG+CAAI DHLFP AC
Sbjct: 327 VRGLWVTGSIPIWRSFFLILVFQ*FLISLSVLPGNCAAIRDHLFPMAACRSMMSFSSDSD 148
Query: 11 NAP 3
N P
Sbjct: 147 NNP 139
Score = 66.1 bits (141), Expect = 5e-011
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -1 / -1
Query: 201 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 28
+ L + LVG I++ L Q LLD RVP ILDL+IS PWQLR + PP+P S+ ++DE+
Sbjct: 337 LHLGERLVGHRIDSHLAQFLLDPRVPVILDLVISSPWQLRSDS*PPIPYGSM*INDEL 164
Score = 41.5 bits (86), Expect = 0.002
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +2 / +3
Query: 83 RSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 184
R+CQG LI RSRI GTR SRR+ R I PTS
Sbjct: 219 RNCQGELITRSRITGTRGSRRNCARWESIL*PTS 320
Score = 35.2 bits (72), Expect = 0.18
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +3 / +1
Query: 60 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY 191
E VV+N A ARE+** DQE +E QEE + + S PQA++
Sbjct: 196 E*VVTNRCAIAREN**RDQELLEHEDQEETAPDGNRSCDPQASH 327
>gb|DT638995.1|DT638995 EST1153926 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHL85 3' end, mRNA sequence
Length = 812
Score = 119 bits (260), Expect = 1e-026
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G ++ EE LII+LHA +GNRWS+IAAQLPGRTDNEIKN WN+ IKKKLRQ GIDP THK
Sbjct: 148 GLLSESEEKLIIDLHAAIGNRWSRIAAQLPGRTDNEIKNYWNTRIKKKLRQMGIDPVTHK 327
Query: 184 PLTE 195
PLT+
Sbjct: 328 PLTQ 339
Score = 78.2 bits (168), Expect = 1e-014
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = -2 / -1
Query: 191 VSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWA 12
V GLWV GS+P SFFL+ F FLISLSVLPG+CAAI DHLFP AC
Sbjct: 335 VRGLWVTGSIPIWRSFFLILVFQ*FLISLSVLPGNCAAIRDHLFPMAACRSMMSFSSDSD 156
Query: 11 NAP 3
N P
Sbjct: 155 NNP 147
Score = 66.1 bits (141), Expect = 5e-011
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -1 / -3
Query: 201 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 28
+ L + LVG I++ L Q LLD RVP ILDL+IS PWQLR + PP+P S+ ++DE+
Sbjct: 345 LHLGERLVGHRIDSHLAQFLLDPRVPVILDLVISSPWQLRSDS*PPIPYGSM*INDEL 172
Score = 41.5 bits (86), Expect = 0.002
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +2 / +2
Query: 83 RSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 184
R+CQG LI RSRI GTR SRR+ R I PTS
Sbjct: 227 RNCQGELITRSRITGTRGSRRNCARWESIL*PTS 328
Score = 35.2 bits (72), Expect = 0.18
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +3 / +3
Query: 60 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY 191
E VV+N A ARE+** DQE +E QEE + + S PQA++
Sbjct: 204 E*VVTNRCAIAREN**RDQELLEHEDQEETAPDGNRSCDPQASH 335
>gb|AY356372.1| Pinus taeda R2R3-MYB transcription factor (MYB1) mRNA, complete cds
Length = 1023
Score = 119 bits (260), Expect = 1e-026
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G ++ EE LII+LHA +GNRWS+IAAQLPGRTDNEIKN WN+ IKKKLRQ GIDP THK
Sbjct: 202 GLLSESEEKLIIDLHAAIGNRWSRIAAQLPGRTDNEIKNYWNTRIKKKLRQMGIDPVTHK 381
Query: 184 PLTE 195
PLT+
Sbjct: 382 PLTQ 393
Score = 78.2 bits (168), Expect = 1e-014
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = -2 / -2
Query: 191 VSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWA 12
V GLWV GS+P SFFL+ F FLISLSVLPG+CAAI DHLFP AC
Sbjct: 389 VRGLWVTGSIPIWRSFFLILVFQ*FLISLSVLPGNCAAIRDHLFPMAACRSMMSFSSDSD 210
Query: 11 NAP 3
N P
Sbjct: 209 NNP 201
Score = 66.1 bits (141), Expect = 5e-011
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -1 / -1
Query: 201 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 28
+ L + LVG I++ L Q LLD RVP ILDL+IS PWQLR + PP+P S+ ++DE+
Sbjct: 399 LHLGERLVGHRIDSHLAQFLLDPRVPVILDLVISSPWQLRSDS*PPIPYGSM*INDEL 226
Score = 41.5 bits (86), Expect = 0.002
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +2 / +2
Query: 83 RSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 184
R+CQG LI RSRI GTR SRR+ R I PTS
Sbjct: 281 RNCQGELITRSRITGTRGSRRNCARWESIL*PTS 382
Score = 35.2 bits (72), Expect = 0.18
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +3 / +3
Query: 60 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY 191
E VV+N A ARE+** DQE +E QEE + + S PQA++
Sbjct: 258 E*VVTNRCAIAREN**RDQELLEHEDQEETAPDGNRSCDPQASH 389
>gb|BQ290999.1|BQ290999 NXRV054_D07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV054_D07 5' similar to Arabidopsis thaliana
sequence At1g09540 putative transcription factor (MYB61)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 764
Score = 116 bits (253), Expect = 1e-025
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+ EE+LI+ELH+VLGNRWSQIA LPGRTDNEIKNLWNSCIK R +GID NTH
Sbjct: 521 GTFSPQEENLIVELHSVLGNRWSQIATHLPGRTDNEIKNLWNSCIKXXXRXRGIDXNTHX 700
Query: 184 PL 189
PL
Sbjct: 701 PL 706
Score = 84.1 bits (181), Expect = 2e-016
Identities = 38/61 (62%), Positives = 38/61 (62%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 6
G VL SMP L FLMHEF RFLISLSVLPG C AI*DHLFPRT C N
Sbjct: 702 GXCVLXSMPRXLXXFLMHEFQRFLISLSVLPGRCVAI*DHLFPRTECSSTMRFSSCGENV 523
Query: 5 P 3
P
Sbjct: 522 P 520
Score = 67.0 bits (143), Expect = 3e-011
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = -1 / -2
Query: 180 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGEC 7
V V I A P +ARVP +LDL+IS Q+ C LRPPVPED +Q ++E+FF+ EC
Sbjct: 697 VRVXIYASXPXXXFNARVPEVLDLVISSSGQVCCYLRPPVPED*MQFNNEIFFLRREC 524
Score = 39.3 bits (81), Expect = 0.010
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3 / +1
Query: 60 EQVVSNCSAAARED***DQESMELVHQEEAEAERH 164
EQVVSN + AR++** DQE +ELVH + RH
Sbjct: 577 EQVVSNSNTPARKN**RDQEPLELVH*KXXXXTRH 681
>gb|BQ634727.1|BQ634727 NXRV072_E09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV072_E09 5' similar to Arabidopsis thaliana
sequence At1g09540 putative transcription factor (MYB61)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 742
Score = 115 bits (251), Expect = 2e-025
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+ E+LI+ELH+VLGNRWSQIA LPG TDNEIKNLWNSCIKKKLRQ+G NTH
Sbjct: 527 GTFSPXXENLIVELHSVLGNRWSQIATHLPGXTDNEIKNLWNSCIKKKLRQRGXXXNTHX 706
Query: 184 PL 189
PL
Sbjct: 707 PL 712
Score = 89.4 bits (193), Expect = 4e-018
Identities = 40/61 (65%), Positives = 40/61 (65%)
Frame = -2 / -2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 6
G VL P CLSFFLMHEF RFLISLSVLPG C AI*DHLFPRT C N
Sbjct: 708 GXCVLXXXPRCLSFFLMHEFQRFLISLSVLPGRCVAI*DHLFPRTECSSTMRFSXXGENV 529
Query: 5 P 3
P
Sbjct: 528 P 526
Score = 66.1 bits (141), Expect = 5e-011
Identities = 31/65 (47%), Positives = 40/65 (61%)
Frame = -1 / -1
Query: 201 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 22
I + V V LP LL +ARVP +LDL+IS Q+ C LRPPVPED +Q ++E+F
Sbjct: 724 IXXXERXVRVXXXXXLPXLLFNARVPEVLDLVISXSGQVCCYLRPPVPED*MQFNNEIFX 545
Query: 21 VLGEC 7
EC
Sbjct: 544 XRREC 530
Score = 39.3 bits (81), Expect = 0.010
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +3 / +1
Query: 60 EQVVSNCSAAARED***DQESMELVHQEEAEA 155
EQVVSN + AR+ ** DQE +ELVH +EA A
Sbjct: 583 EQVVSNSNTPARKX**RDQEPLELVH*KEAXA 678
Score = 30.7 bits (62), Expect = 4.3
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2 / +3
Query: 80 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPT 181
Q +C LI RSR GTRA +RS G T T
Sbjct: 603 QHTCPEXLITRSRTSGTRALKRSXGNXXXXLTRT 704
>gb|DR744198.1|DR744198 RTCU1_20_G08.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_20_G08_A029 5', mRNA sequence
Length = 644
Score = 111 bits (243), Expect = 2e-024
Identities = 43/72 (59%), Positives = 56/72 (77%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL GIDP TH+
Sbjct: 280 GFFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGIDPLTHR 459
Query: 184 PLTEADHGGAAP 219
P + H +P
Sbjct: 460 PFQKTSHHHPSP 495
Score = 61.7 bits (131), Expect = 1e-009
Identities = 28/47 (59%), Positives = 30/47 (63%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
G WV GS+P +SF EF F ISLSV PG AI DHLFPR AC
Sbjct: 461 GRWVRGSIPMLISFRFRCEFQ*FFISLSVRPGKRPAIKDHLFPRRAC 321
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = -1 / -3
Query: 204 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 25
V SL K +G G+ + + L RVP +L L+I WQ RP + ++ VQ ++++
Sbjct: 480 VRSLLKRTMG*GVYSHADKFSLQMRVPVVLYLVICSSWQTASYQRPLISKEGVQFENKII 301
Query: 24 FVLGECP 4
FV GE P
Sbjct: 300 FVFGEKP 280
>gb|CF477905.1|CF477905 RTWW3_13_C03.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_13_C03_A022 5', mRNA sequence
Length = 707
Score = 111 bits (242), Expect = 3e-024
Identities = 45/62 (72%), Positives = 52/62 (83%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G +QDEEDLII LH +LGNRWS IA +LPGRTDNEIKN WNS + K+LR++GIDP THK
Sbjct: 288 GNISQDEEDLIIRLHRLLGNRWSLIAGRLPGRTDNEIKNHWNSHLSKQLRKRGIDPLTHK 467
Query: 184 PL 189
PL
Sbjct: 468 PL 473
Score = 59.9 bits (127), Expect = 5e-009
Identities = 30/61 (49%), Positives = 33/61 (54%)
Frame = -2 / -2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 6
GLWV GS+P LS L F F ISLSV PG+ AI DHL PR+ C SW
Sbjct: 469 GLWVRGSIPRFLSCLLR*LFQ*FFISLSVRPGNLPAINDHLLPRSRCRRIMRSSSSWEMF 290
Query: 5 P 3
P
Sbjct: 289 P 287
Score = 57.2 bits (121), Expect = 3e-008
Identities = 25/56 (44%), Positives = 34/56 (60%)
Frame = -1 / -1
Query: 180 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 13
VG GI+ L LL +P IL ++ PWQ C RPPV ++ +Q + E+FFVLG
Sbjct: 464 VGEGIDPSLS*LLAQMTIPVILYFVVCSPWQSACYQRPPVAKEPMQANYEIFFVLG 297
>gb|DR117421.1|DR117421 RTMG1_6_G12.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_6_G12_A029 5', mRNA sequence
Length = 872
Score = 110 bits (240), Expect = 6e-024
Identities = 42/68 (61%), Positives = 57/68 (83%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL KG+DP TH+
Sbjct: 106 GNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSKGLDPQTHR 285
Query: 184 PLTEADHG 207
PL E +G
Sbjct: 286 PLGEPYNG 309
Score = 49.1 bits (103), Expect = 9e-006
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = -1 / -3
Query: 207 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 28
A++ L+ V +GI + Q L VP +L L++ P Q CN RP V E V+ DDE+
Sbjct: 309 AIVGLA*RTVRLGIESLA*QFSLYMSVPVVLYLVVRAPGQSPCNKRPLVAEKGVEFDDEL 130
Query: 27 FFVLGE 10
F E
Sbjct: 129 VFFFRE 112
Score = 46.4 bits (97), Expect = 6e-005
Identities = 24/47 (51%), Positives = 27/47 (57%)
Frame = -2 / -1
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
S SG V GS P +F + F F ISLSV PG+ AI DHL PR
Sbjct: 296 SPSGRCVWGSSPLLSNFLFI*VFQ*FFISLSVRPGNLPAIRDHLLPR 156
>gb|DR117678.1|DR117678 RTMG1_8_A10.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_8_A10_A029 5', mRNA sequence
Length = 852
Score = 110 bits (240), Expect = 6e-024
Identities = 42/68 (61%), Positives = 57/68 (83%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL KG+DP TH+
Sbjct: 14 GNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSKGLDPQTHR 193
Query: 184 PLTEADHG 207
PL E +G
Sbjct: 194 PLGEPYNG 217
Score = 49.1 bits (103), Expect = 9e-006
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = -1 / -3
Query: 207 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 28
A++ L+ V +GI + Q L VP +L L++ P Q CN RP V E V+ DDE+
Sbjct: 217 AIVGLA*RTVRLGIESLA*QFSLYMSVPVVLYLVVRAPGQSPCNKRPLVAEKGVEFDDEL 38
Query: 27 FFVLGE 10
F E
Sbjct: 37 VFFFRE 20
Score = 46.4 bits (97), Expect = 6e-005
Identities = 24/47 (51%), Positives = 27/47 (57%)
Frame = -2 / -1
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
S SG V GS P +F + F F ISLSV PG+ AI DHL PR
Sbjct: 204 SPSGRCVWGSSPLLSNFLFI*VFQ*FFISLSVRPGNLPAIRDHLLPR 64
>gb|CF390133.1|CF390133 RTDR2_12_C07.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_12_C07_A021 5', mRNA
sequence
Length = 712
Score = 94.8 bits (205), Expect(2) = 2e-023
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +1 / +1
Query: 49 AVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTE 195
AV RWS+IAAQLPGRTDNEIKN WN+ IKKKLRQ GIDP THKPLT+
Sbjct: 523 AVFHTRWSRIAAQLPGRTDNEIKNYWNTRIKKKLRQMGIDPVTHKPLTQ 669
Score = 69.3 bits (148), Expect = 6e-012
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = -2 / -3
Query: 191 VSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTA 48
V GLWV GS+P SFFL+ F FLISLSVLPG+CAAI DHL +TA
Sbjct: 665 VRGLWVTGSIPIWRSFFLILVFQ*FLISLSVLPGNCAAIRDHLVWKTA 522
Score = 58.1 bits (123), Expect = 2e-008
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = -1 / -2
Query: 201 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDS 49
+ L + LVG I++ L Q LLD RVP ILDL+IS PWQLR + PP E+S
Sbjct: 675 LHLGERLVGHRIDSHLAQFLLDPRVPVILDLVISSPWQLRSDS*PPGVENS 523
Score = 41.5 bits (86), Expect = 0.002
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +2 / +2
Query: 83 RSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 184
R+CQG LI RSRI GTR SRR+ R I PTS
Sbjct: 557 RNCQGELITRSRITGTRGSRRNCARWESIL*PTS 658
Score = 37.0 bits (76), Expect = 0.050
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +3 / +3
Query: 63 QVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY 191
QVV+N A ARE+** DQE +E QEE + + S PQA++
Sbjct: 537 QVVTNRCAIAREN**RDQELLEHEDQEETAPDGNRSCDPQASH 665
Score = 33.4 bits (68), Expect(2) = 2e-023
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRW 69
G ++ EE LII+LHA +GNR+
Sbjct: 372 GLLSESEEKLIIDLHAAIGNRY 437
>gb|DR117679.1|DR117679 RTMG1_8_A11.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_8_A11_A029 5', mRNA sequence
Length = 801
Score = 108 bits (236), Expect = 2e-023
Identities = 41/68 (60%), Positives = 56/68 (82%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+LH++LGN+WS I +LPGRTDNEIKN WN+ IK+KL KG+DP TH+
Sbjct: 8 GNFSEEEDELIIKLHSLLGNKWSLIVGRLPGRTDNEIKNYWNTHIKRKLLSKGLDPQTHR 187
Query: 184 PLTEADHG 207
PL E +G
Sbjct: 188 PLGEPYNG 211
Score = 44.6 bits (93), Expect = 2e-004
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = -2 / -1
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
S SG V GS P +F + F F ISLSV PG+ I DHL PR
Sbjct: 198 SPSGRCVWGSSPLLSNFLFI*VFQ*FFISLSVRPGNLPTIRDHLLPR 58
>gb|DR685654.1|DR685654 EST1075731 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAB633 3' end, mRNA sequence
Length = 786
Score = 108 bits (235), Expect = 3e-023
Identities = 46/82 (56%), Positives = 57/82 (69%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G ++ EE LII+LH+ LGNRWS+IAA LPGRTDNEIKN WN+ IKKKL++ GIDP TH
Sbjct: 229 GLLSESEEQLIIDLHSQLGNRWSKIAAHLPGRTDNEIKNYWNTHIKKKLKRMGIDPVTHG 408
Query: 184 PLTEADHGGAAPTISTERTSGS 249
P+ + G + E T S
Sbjct: 409 PIIDQAEGKPSKPALDEVTEES 474
Score = 59.0 bits (125), Expect = 9e-009
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = -2 / -2
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
S+ G V GS+P SFFL+ F FLISLSV PG CAAI DHL P
Sbjct: 419 SIMGPCVTGSIPMRFSFFLI*VFQ*FLISLSVRPGKCAAILDHLLP 282
Score = 52.7 bits (111), Expect = 7e-007
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -1 / -1
Query: 171 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 22
GI++ QLLLD VP ILD II P Q+ NLRPPV E +++++E+ F
Sbjct: 396 GIDSHALQLLLDMSVPVILDFIICPSRQVCGNLRPPVTELGMEINNELLF 247
Score = 31.6 bits (64), Expect = 2.3
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 86 SCQGGLIMRSRIYGTRASRRS*GRKALIP 172
+C G IM+SRI GT SRRS* IP
Sbjct: 311 TCLDGQIMKSRITGTLISRRS*SAWESIP 397
Score = 30.7 bits (62), Expect = 4.3
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3 / +3
Query: 63 QVVSNCSAAARED***DQESMELVHQEEAEA 155
QVV +C A D **+QE +E +QEEAEA
Sbjct: 288 QVV*DCRTLAWTDR**NQELLEHSYQEEAEA 380
>gb|CO173370.1|CO173370 NDL1_35_F03.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_35_F03_A029 5', mRNA sequence
Length = 745
Score = 107 bits (234), Expect = 4e-023
Identities = 43/62 (69%), Positives = 51/62 (82%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F ++E++LII+LHAVLGN+WS IA +L GRTDNEIKN WNS IKKKL KG+DP TH
Sbjct: 77 GGFTEEEDELIIKLHAVLGNKWSLIAGRLAGRTDNEIKNYWNSHIKKKLLSKGLDPKTHC 256
Query: 184 PL 189
PL
Sbjct: 257 PL 262
Score = 66.1 bits (141), Expect = 5e-011
Identities = 30/47 (63%), Positives = 32/47 (68%)
Frame = -2 / -2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
G WVLGS P +FFLM F F ISLSV P + AI DHLFPRTAC
Sbjct: 258 GQWVLGSSPLLSNFFLM*LFQ*FFISLSVRPANLPAIRDHLFPRTAC 118
Score = 53.6 bits (113), Expect = 4e-007
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = -1 / -1
Query: 204 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 25
V+ L++ VG+G+ + Q LLD VP +L L++S P Q CN RP V ++ + DD
Sbjct: 277 VVGLAEGTVGLGVESLA*QFLLDVTVPVVLYLVVSSPCQSPCNKRPLVSKNCM*FDD*FV 98
Query: 24 FVLGE 10
GE
Sbjct: 97 LFFGE 83
>gb|DR101544.1|DR101544 STRR1_74_C02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_C02_A033 3', mRNA sequence
Length = 817
Score = 107 bits (234), Expect = 4e-023
Identities = 43/62 (69%), Positives = 51/62 (82%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F ++E++LII+LHAVLGN+WS IA +L GRTDNEIKN WNS IKKKL KG+DP TH
Sbjct: 54 GGFTEEEDELIIKLHAVLGNKWSLIAGRLAGRTDNEIKNYWNSHIKKKLLSKGLDPKTHC 233
Query: 184 PL 189
PL
Sbjct: 234 PL 239
Score = 66.1 bits (141), Expect = 5e-011
Identities = 30/47 (63%), Positives = 32/47 (68%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
G WVLGS P +FFLM F F ISLSV P + AI DHLFPRTAC
Sbjct: 235 GQWVLGSSPLLSNFFLM*LFQ*FFISLSVRPANLPAIRDHLFPRTAC 95
Score = 53.6 bits (113), Expect = 4e-007
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = -1 / -3
Query: 204 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 25
V+ L++ VG+G+ + Q LLD VP +L L++S P Q CN RP V ++ + DD
Sbjct: 254 VVGLAEGTVGLGVESLA*QFLLDVTVPVVLYLVVSSPCQSPCNKRPLVSKNCM*FDD*FV 75
Query: 24 FVLGE 10
GE
Sbjct: 74 LFFGE 60
>gb|DR101609.1|DR101609 STRR1_74_C02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_C02_A033 5', mRNA sequence
Length = 741
Score = 107 bits (234), Expect = 4e-023
Identities = 43/62 (69%), Positives = 51/62 (82%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F ++E++LII+LHAVLGN+WS IA +L GRTDNEIKN WNS IKKKL KG+DP TH
Sbjct: 111 GGFTEEEDELIIKLHAVLGNKWSLIAGRLAGRTDNEIKNYWNSHIKKKLLSKGLDPKTHC 290
Query: 184 PL 189
PL
Sbjct: 291 PL 296
Score = 66.1 bits (141), Expect = 5e-011
Identities = 30/47 (63%), Positives = 32/47 (68%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
G WVLGS P +FFLM F F ISLSV P + AI DHLFPRTAC
Sbjct: 292 GQWVLGSSPLLSNFFLM*LFQ*FFISLSVRPANLPAIRDHLFPRTAC 152
Score = 53.6 bits (113), Expect = 4e-007
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = -1 / -2
Query: 204 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 25
V+ L++ VG+G+ + Q LLD VP +L L++S P Q CN RP V ++ + DD
Sbjct: 311 VVGLAEGTVGLGVESLA*QFLLDVTVPVVLYLVVSSPCQSPCNKRPLVSKNCM*FDD*FV 132
Query: 24 FVLGE 10
GE
Sbjct: 131 LFFGE 117
>gb|DR111301.1|DR111301 RTS1_16_F03.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_16_F03_A029 5', mRNA sequence
Length = 729
Score = 107 bits (234), Expect = 4e-023
Identities = 43/62 (69%), Positives = 51/62 (82%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F ++E++LII+LHAVLGN+WS IA +L GRTDNEIKN WNS IKKKL KG+DP TH
Sbjct: 215 GGFTEEEDELIIKLHAVLGNKWSLIAGRLAGRTDNEIKNYWNSHIKKKLLSKGLDPKTHC 394
Query: 184 PL 189
PL
Sbjct: 395 PL 400
Score = 66.1 bits (141), Expect = 5e-011
Identities = 30/47 (63%), Positives = 32/47 (68%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
G WVLGS P +FFLM F F ISLSV P + AI DHLFPRTAC
Sbjct: 396 GQWVLGSSPLLSNFFLM*LFQ*FFISLSVRPANLPAIRDHLFPRTAC 256
Score = 53.6 bits (113), Expect = 4e-007
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = -1 / -3
Query: 204 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 25
V+ L++ VG+G+ + Q LLD VP +L L++S P Q CN RP V ++ + DD
Sbjct: 415 VVGLAEGTVGLGVESLA*QFLLDVTVPVVLYLVVSSPCQSPCNKRPLVSKNCM*FDD*FV 236
Query: 24 FVLGE 10
GE
Sbjct: 235 LFFGE 221
>gb|CF387233.1|CF387233 RTDR1_11_B07.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_11_B07_A015 5', mRNA
sequence
Length = 652
Score = 106 bits (232), Expect = 7e-023
Identities = 39/67 (58%), Positives = 56/67 (83%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+ +GN+WS IA +LPGRTDNEIKN WN+ IK+KL KG+DP TH+
Sbjct: 16 GSFTEEEDELIIKLHSFVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSKGLDPQTHR 195
Query: 184 PLTEADH 204
PL + ++
Sbjct: 196 PLGQPNN 216
Score = 57.2 bits (121), Expect = 3e-008
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = -1 / -2
Query: 204 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 25
++ L++W +G+G+ + Q D VP +L L++ P Q CN RP + + V+ DDE+
Sbjct: 216 IVWLAEWTMGLGVESLAQQFSFDVCVPVVLYLVVRPSGQSPCN*RPLIANEGVEFDDELV 37
Query: 24 FVLGE 10
F E
Sbjct: 36 FFFRE 22
Score = 53.1 bits (112), Expect = 5e-007
Identities = 25/44 (56%), Positives = 27/44 (61%)
Frame = -2 / -3
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
SG WV GS P +F LM F F ISLSV PG+ AI DHL P
Sbjct: 200 SGRWVWGSSPLLSNFLLMCVFQ*FFISLSVRPGNLPAIKDHLLP 69
>gb|DR117116.1|DR117116 RTMG1_4_G10.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_4_G10_A029 5', mRNA sequence
Length = 805
Score = 106 bits (232), Expect = 7e-023
Identities = 39/67 (58%), Positives = 56/67 (83%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+ +GN+WS IA +LPGRTDNEIKN WN+ IK+KL KG+DP TH+
Sbjct: 223 GSFTEEEDELIIKLHSFVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSKGLDPQTHR 402
Query: 184 PLTEADH 204
PL + ++
Sbjct: 403 PLGQPNN 423
Score = 57.6 bits (122), Expect = 2e-008
Identities = 23/65 (35%), Positives = 37/65 (56%)
Frame = -1 / -2
Query: 204 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 25
++ L++W +G+G+ + Q D VP +L L++ P Q CN RP V + V+ DDE+
Sbjct: 423 IVWLAEWTMGLGVESLAQQFSFDVCVPVVLYLVVRPSGQSPCN*RPLVANEGVEFDDELV 244
Query: 24 FVLGE 10
F E
Sbjct: 243 FFFRE 229
Score = 53.1 bits (112), Expect = 5e-007
Identities = 25/44 (56%), Positives = 27/44 (61%)
Frame = -2 / -3
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
SG WV GS P +F LM F F ISLSV PG+ AI DHL P
Sbjct: 407 SGRWVWGSSPLLSNFLLMCVFQ*FFISLSVRPGNLPAIKDHLLP 276
>gb|DR161238.1|DR161238 RTFE1_10_D10.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_10_D10_A029 5', mRNA sequence
Length = 766
Score = 106 bits (232), Expect = 7e-023
Identities = 39/67 (58%), Positives = 56/67 (83%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+ +GN+WS IA +LPGRTDNEIKN WN+ IK+KL KG+DP TH+
Sbjct: 222 GSFTEEEDELIIKLHSFVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSKGLDPQTHR 401
Query: 184 PLTEADH 204
PL + ++
Sbjct: 402 PLGQPNN 422
Score = 57.2 bits (121), Expect = 3e-008
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = -1 / -3
Query: 204 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 25
++ L++W +G+G+ + Q D VP +L L++ P Q CN RP + + V+ DDE+
Sbjct: 422 IVWLAEWTMGLGVESLAQQFSFDVCVPVVLYLVVRPSGQSPCN*RPLIANEGVEFDDELV 243
Query: 24 FVLGE 10
F E
Sbjct: 242 FFFRE 228
Score = 53.1 bits (112), Expect = 5e-007
Identities = 25/44 (56%), Positives = 27/44 (61%)
Frame = -2 / -1
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
SG WV GS P +F LM F F ISLSV PG+ AI DHL P
Sbjct: 406 SGRWVWGSSPLLSNFLLMCVFQ*FFISLSVRPGNLPAIKDHLLP 275
>gb|CF385274.1|CF385274 RTDR1_2_D01.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_2_D01_A015 5', mRNA
sequence
Length = 703
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 98 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 277
Query: 184 PL 189
PL
Sbjct: 278 PL 283
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -1
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 313 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 134
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 133 DDEFVFFFCE 104
Score = 50.0 bits (105), Expect = 5e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 279 GRWDWGSIPLINNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 145
>gb|CF388652.1|CF388652 RTDR2_4_A10.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_4_A10_A021 5', mRNA
sequence
Length = 760
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 226 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 405
Query: 184 PL 189
PL
Sbjct: 406 PL 411
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -2
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 441 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 262
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 261 DDEFVFFFCE 232
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 407 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 273
>gb|CF389081.1|CF389081 RTDR2_13_A10.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_13_A10_A021 5', mRNA
sequence
Length = 743
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 152 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 331
Query: 184 PL 189
PL
Sbjct: 332 PL 337
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -2
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 367 GDIVAAVGLTERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 188
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 187 DDEFVFFFCE 158
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 333 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 199
>gb|CF400460.1|CF400460 RTWW1_5_H12.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_5_H12_A015 5', mRNA sequence
Length = 747
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 160 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 339
Query: 184 PL 189
PL
Sbjct: 340 PL 345
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -1
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 375 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 196
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 195 DDEFVFFFCE 166
Score = 50.0 bits (105), Expect = 5e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 341 GRWDWGSIPLINNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 207
>gb|CF401736.1|CF401736 RTWW1_14_C05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_14_C05_A015 5', mRNA sequence
Length = 792
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 195 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 374
Query: 184 PL 189
PL
Sbjct: 375 PL 380
Score = 60.8 bits (129), Expect = 2e-009
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = -1 / -2
Query: 207 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 28
A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+ DDE
Sbjct: 398 AAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEFDDEF 219
Query: 27 FFVLGE 10
F E
Sbjct: 218 VFFFCE 201
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 376 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 242
>gb|CF402623.1|CF402623 RTWW1_21_B11.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_21_B11_A015 5', mRNA sequence
Length = 755
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 172 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 351
Query: 184 PL 189
PL
Sbjct: 352 PL 357
Score = 60.8 bits (129), Expect = 2e-009
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = -1 / -3
Query: 207 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 28
A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+ DDE
Sbjct: 375 AAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEFDDEF 196
Query: 27 FFVLGE 10
F E
Sbjct: 195 VFFFCE 178
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 353 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 219
>gb|CF665728.1|CF665728 RTCNT1_18_C05.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_18_C05_A029 3', mRNA sequence
Length = 704
Score = 106 bits (231), Expect = 1e-022
Identities = 40/61 (65%), Positives = 52/61 (85%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP TH+
Sbjct: 8 GNFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTHR 187
Query: 184 P 186
P
Sbjct: 188 P 190
Score = 55.8 bits (118), Expect = 8e-008
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = -2 / -3
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+G V GS P +SF EF FLISLSV PG AI DHL PR AC
Sbjct: 192 NGRCVRGSTPMLISFLFRCEFQ*FLISLSVRPGKRPAIRDHLLPRRAC 49
Score = 45.5 bits (95), Expect = 1e-004
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -1 / -2
Query: 198 SLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
+L K V GINA +L L RVP ILDL++ Q P + +SVQ ++++ FV
Sbjct: 202 NLLKRTVRQGINAHADKLSLQMRVPVILDLVVCSTGQTTSYQGPLIAXESVQFENKIVFV 23
Query: 18 LGECP 4
+ P
Sbjct: 22 FRKIP 8
>gb|CF669490.1|CF669490 RTCNT1_44_A10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_44_A10_A029 3', mRNA sequence
Length = 655
Score = 106 bits (231), Expect = 1e-022
Identities = 40/61 (65%), Positives = 52/61 (85%)
Frame = +1 / -2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP TH+
Sbjct: 450 GNFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTHR 271
Query: 184 P 186
P
Sbjct: 270 P 268
Score = 55.8 bits (118), Expect = 8e-008
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = -2 / +2
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+G V GS P +SF EF FLISLSV PG AI DHL PR AC
Sbjct: 266 NGRCVRGSTPMLISFLFRCEFQ*FLISLSVRPGKRPAIRDHLLPRRAC 409
Score = 46.4 bits (97), Expect = 6e-005
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = -1 / +1
Query: 198 SLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
+L K V GINA +L L RVP ILDL++ Q P + ++SVQ ++++ FV
Sbjct: 256 NLLKRTVRQGINAHADKLSLQMRVPVILDLVVCSTGQTTSYQGPLIAKESVQFENKIVFV 435
Query: 18 LGECP 4
+ P
Sbjct: 436 FRKIP 450
>gb|BX679906.1|BX679906 BX679906 RS Pinus pinaster cDNA clone RS36A06, mRNA sequence
Length = 448
Score = 106 bits (231), Expect = 1e-022
Identities = 38/62 (61%), Positives = 55/62 (88%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F+++E+DLII+LH++LGN+WS IA +LPGRTDNEIKN WN+ +K+KL +G+DP +H+
Sbjct: 238 GSFSEEEDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHMKRKLLSRGLDPQSHR 417
Query: 184 PL 189
PL
Sbjct: 418 PL 423
Score = 61.2 bits (130), Expect = 2e-009
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = -1 / -2
Query: 210 TAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDE 31
T++ +K +G+G+ + Q L RVP IL L++ PWQ CN RP V E+ V+ DDE
Sbjct: 444 TSLARQAKGTMGLGVESPAQQFPLHVRVPVILYLVVRSPWQSPCNKRPLVAEEGVEFDDE 265
Query: 30 VFF 22
+ F
Sbjct: 264 IVF 256
Score = 48.7 bits (102), Expect = 1e-005
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
G W GS P +F M F F ISLSV PG+ AI DHL PR
Sbjct: 419 GRWDWGSSPLLSNFLFMCVFQ*FFISLSVRPGNLPAISDHLLPR 288
>gb|BX680288.1|BX680288 BX680288 RS Pinus pinaster cDNA clone RS41E09, mRNA sequence
Length = 469
Score = 106 bits (231), Expect = 1e-022
Identities = 38/62 (61%), Positives = 55/62 (88%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F+++E+DLII+LH++LGN+WS IA +LPGRTDNEIKN WN+ +K+KL +G+DP +H+
Sbjct: 224 GSFSEEEDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHMKRKLLSRGLDPQSHR 403
Query: 184 PL 189
PL
Sbjct: 404 PL 409
Score = 61.2 bits (130), Expect = 2e-009
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = -1 / -1
Query: 210 TAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDE 31
T++ +K +G+G+ + Q L RVP IL L++ PWQ CN RP V E+ V+ DDE
Sbjct: 430 TSLARQAKGTMGLGVESPAQQFPLHVRVPVILYLVVRSPWQSPCNKRPLVAEEGVEFDDE 251
Query: 30 VFF 22
+ F
Sbjct: 250 IVF 242
Score = 48.7 bits (102), Expect = 1e-005
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -2 / -2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
G W GS P +F M F F ISLSV PG+ AI DHL PR
Sbjct: 405 GRWDWGSSPLLSNFLFMCVFQ*FFISLSVRPGNLPAISDHLLPR 274
>gb|CO162411.1|CO162411 FLD1_35_D02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_35_D02_A029 3', mRNA sequence
Length = 717
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / -3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 604 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 425
Query: 184 PL 189
PL
Sbjct: 424 PL 419
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / +2
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 389 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 568
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 569 DDEFVFFFCE 598
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / +3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 423 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 557
>gb|CO198121.1|CO198121 GEO1_11_A02.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_11_A02_A029 5', mRNA sequence
Length = 667
Score = 106 bits (231), Expect = 1e-022
Identities = 38/62 (61%), Positives = 55/62 (88%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F+++E+DLII+LH++LGN+WS IA +LPGRTDNEIKN WN+ +K+KL +G+DP +H+
Sbjct: 174 GSFSEEEDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHMKRKLLSRGLDPQSHR 353
Query: 184 PL 189
PL
Sbjct: 354 PL 359
Score = 57.6 bits (122), Expect = 2e-008
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = -1 / -3
Query: 210 TAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDE 31
T++ +K +G+G+ + Q RVP IL ++ PWQ CN RP V E+ V+ DDE
Sbjct: 380 TSLAGQAKRTMGLGVESPTQQFPFHVRVPVILYFVVRSPWQSPCNKRPLVAEEGVEFDDE 201
Query: 30 VFF 22
+ F
Sbjct: 200 IVF 192
Score = 48.7 bits (102), Expect = 1e-005
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
G W GS P +F M F F ISLSV PG+ AI DHL PR
Sbjct: 355 GRWDWGSSPLLSNFLFMCVFQ*FFISLSVRPGNLPAISDHLLPR 224
>gb|CO361315.1|CO361315 NDL2_4_D03.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_4_D03_A029 3', mRNA sequence
Length = 894
Score = 106 bits (231), Expect = 1e-022
Identities = 38/62 (61%), Positives = 55/62 (88%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F+++E+DLII+LH++LGN+WS IA +LPGRTDNEIKN WN+ +K+KL +G+DP +H+
Sbjct: 161 GSFSEEEDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHMKRKLLSRGLDPQSHR 340
Query: 184 PL 189
PL
Sbjct: 341 PL 346
Score = 57.6 bits (122), Expect = 2e-008
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = -1 / -3
Query: 210 TAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDE 31
T++ +K +G+G+ + Q RVP IL ++ PWQ CN RP V E+ V+ DDE
Sbjct: 367 TSLAGQAKRTMGLGVESPAQQFPFHVRVPVILYFVVRSPWQSPCNKRPLVAEEGVEFDDE 188
Query: 30 VFF 22
+ F
Sbjct: 187 IVF 179
Score = 48.7 bits (102), Expect = 1e-005
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
G W GS P +F M F F ISLSV PG+ AI DHL PR
Sbjct: 342 GRWDWGSSPLLSNFLFMCVFQ*FFISLSVRPGNLPAISDHLLPR 211
>gb|CO361397.1|CO361397 NDL2_4_D03.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_4_D03_A029 5', mRNA sequence
Length = 804
Score = 106 bits (231), Expect = 1e-022
Identities = 38/62 (61%), Positives = 55/62 (88%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F+++E+DLII+LH++LGN+WS IA +LPGRTDNEIKN WN+ +K+KL +G+DP +H+
Sbjct: 167 GSFSEEEDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHMKRKLLSRGLDPQSHR 346
Query: 184 PL 189
PL
Sbjct: 347 PL 352
Score = 57.6 bits (122), Expect = 2e-008
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = -1 / -3
Query: 210 TAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDE 31
T++ +K +G+G+ + Q RVP IL ++ PWQ CN RP V E+ V+ DDE
Sbjct: 373 TSLAGQAKRTMGLGVESPAQQFPFHVRVPVILYFVVRSPWQSPCNKRPLVAEEGVEFDDE 194
Query: 30 VFF 22
+ F
Sbjct: 193 IVF 185
Score = 48.7 bits (102), Expect = 1e-005
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
G W GS P +F M F F ISLSV PG+ AI DHL PR
Sbjct: 348 GRWDWGSSPLLSNFLFMCVFQ*FFISLSVRPGNLPAISDHLLPR 217
>gb|CV034082.1|CV034082 RTNACL1_38_B11.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_38_B11_A029 5', mRNA sequence
Length = 734
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 203 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 382
Query: 184 PL 189
PL
Sbjct: 383 PL 388
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -2
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 418 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 239
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 238 DDEFVFFFCE 209
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 384 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 250
>gb|CX646616.1|CX646616 COLD1_10_A05.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_10_A05_A029 5', mRNA sequence
Length = 887
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 195 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 374
Query: 184 PL 189
PL
Sbjct: 375 PL 380
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -1
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 410 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 231
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 230 DDEFVFFFCE 201
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 376 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 242
>gb|CX648418.1|CX648418 COLD1_28_B12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_28_B12_A029 5', mRNA sequence
Length = 868
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 207 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 386
Query: 184 PL 189
PL
Sbjct: 387 PL 392
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -3
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 422 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 243
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 242 DDEFVFFFCE 213
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 388 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 254
>gb|DR057958.1|DR057958 RTNIT1_8_G05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_8_G05_A029 5', mRNA sequence
Length = 849
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 163 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 342
Query: 184 PL 189
PL
Sbjct: 343 PL 348
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -1
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 378 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 199
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 198 DDEFVFFFCE 169
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 344 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 210
>gb|DR079868.1|DR079868 RTFEPL1_18_F11.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_18_F11_A029 3', mRNA sequence
Length = 745
Score = 106 bits (231), Expect = 1e-022
Identities = 40/61 (65%), Positives = 52/61 (85%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP TH+
Sbjct: 41 GNFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTHR 220
Query: 184 P 186
P
Sbjct: 221 P 223
Score = 55.4 bits (117), Expect = 1e-007
Identities = 27/47 (57%), Positives = 28/47 (59%)
Frame = -2 / -2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
G V GS P +SF EF FLISLSV PG AI DHL PR AC
Sbjct: 222 GRCVRGSTPMLISFLFRCEFQ*FLISLSVRPGKRPAIRDHLLPRRAC 82
Score = 45.1 bits (94), Expect = 2e-004
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -1 / -1
Query: 198 SLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
+L K V GINA +L L RVP ILDL++ Q P + + SVQ ++++ FV
Sbjct: 235 NLLKRTVRQGINAHADKLSLQMRVPVILDLVVCSTGQTTSYQGPLIAKKSVQFENKIVFV 56
Query: 18 LGECP 4
+ P
Sbjct: 55 FRKIP 41
>gb|DR079932.1|DR079932 RTFEPL1_18_F11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_18_F11_A029 5', mRNA sequence
Length = 689
Score = 106 bits (231), Expect = 1e-022
Identities = 40/61 (65%), Positives = 52/61 (85%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP TH+
Sbjct: 162 GNFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTHR 341
Query: 184 P 186
P
Sbjct: 342 P 344
Score = 55.4 bits (117), Expect = 1e-007
Identities = 27/47 (57%), Positives = 28/47 (59%)
Frame = -2 / -2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
G V GS P +SF EF FLISLSV PG AI DHL PR AC
Sbjct: 343 GRCVRGSTPMLISFLFRCEFQ*FLISLSVRPGKRPAIRDHLLPRRAC 203
Score = 45.1 bits (94), Expect = 2e-004
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -1 / -1
Query: 198 SLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
+L K V GINA +L L RVP ILDL++ Q P + + SVQ ++++ FV
Sbjct: 356 NLLKRTVRQGINAHADKLSLQMRVPVILDLVVCSTGQTTSYQGPLIAKKSVQFENKIVFV 177
Query: 18 LGECP 4
+ P
Sbjct: 176 FRKIP 162
>gb|DR111427.1|DR111427 RTS1_17_F02.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_17_F02_A029 5', mRNA sequence
Length = 630
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 212 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 391
Query: 184 PL 189
PL
Sbjct: 392 PL 397
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -3
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 427 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 248
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 247 DDEFVFFFCE 218
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 393 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 259
>gb|DR168212.1|DR168212 RTPHOS1_23_H12.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_23_H12_A029 5', mRNA sequence
Length = 600
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 204 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 383
Query: 184 PL 189
PL
Sbjct: 384 PL 389
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -2
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 419 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 240
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 239 DDEFVFFFCE 210
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 385 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 251
>gb|DR178268.1|DR178268 RTMNUT1_10_C01.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_10_C01_A029 5', mRNA sequence
Length = 719
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 190 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 369
Query: 184 PL 189
PL
Sbjct: 370 PL 375
Score = 62.6 bits (133), Expect = 7e-010
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = -1 / -3
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 405 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 226
Query: 39 DDEVFF 22
DDE F
Sbjct: 225 DDEFVF 208
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 371 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 237
>gb|DR179654.1|DR179654 RTMNUT1_23_B05.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_23_B05_A029 5', mRNA sequence
Length = 685
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 114 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 293
Query: 184 PL 189
PL
Sbjct: 294 PL 299
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -3
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 329 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 150
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 149 DDEFVFFFCE 120
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 295 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 161
>gb|DR387764.1|DR387764 RTHG1_24_A11.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_24_A11_A029 3', mRNA sequence
Length = 796
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / -3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 590 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 411
Query: 184 PL 189
PL
Sbjct: 410 PL 405
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / +3
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 375 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 554
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 555 DDEFVFFFCE 584
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / +1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 409 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 543
>gb|DR387774.1|DR387774 RTHG1_24_B11.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_24_B11_A029 3', mRNA sequence
Length = 781
Score = 106 bits (231), Expect = 1e-022
Identities = 40/62 (64%), Positives = 54/62 (87%)
Frame = +1 / -3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 566 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHR 387
Query: 184 PL 189
PL
Sbjct: 386 PL 381
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / +3
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 351 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 530
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 531 DDEFVFFFCE 560
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / +1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 385 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 519
>gb|CF667523.1|CF667523 RTCNT1_30_H07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_30_H07_A029 5', mRNA sequence
Length = 667
Score = 106 bits (230), Expect = 1e-022
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G +EEDLI+ LH +LGNRWS IA ++PGRTDNE+KN WN+ + KKL +GIDP THK
Sbjct: 268 GHILPEEEDLILRLHRLLGNRWSLIAGRMPGRTDNEVKNYWNTHLSKKLISQGIDPRTHK 447
Query: 184 PLTEADHGGAAP 219
PL E++ ++P
Sbjct: 448 PLAESEDICSSP 483
Score = 61.2 bits (130), Expect = 2e-009
Identities = 33/64 (51%), Positives = 38/64 (59%)
Frame = -2 / -3
Query: 236 LSVLMVGAAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
L+ L +G S S +GL V GS+P +SF L F FL SLSVLPG AI DHLFP
Sbjct: 500 LTSLFLGLEHMSSDSANGLCVRGSIP*LISFLLRWVFQ*FLTSLSVLPGIRPAIKDHLFP 321
Query: 56 RTAC 45
R C
Sbjct: 320 RRRC 309
Score = 32.1 bits (65), Expect = 1.6
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1 / -2
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G+ T V + V ++ +L + +P +LDLII + RPPV + ++Q
Sbjct: 483 GTRTYVFGFCQRFVRPRVDTLTDKLFAEVGIPIVLDLIIRSAGHTSSDQRPPVSKKTMQP 304
Query: 39 DDEVFFV 19
+ +F +
Sbjct: 303 EY*IFLL 283
>gb|BX784172.1|BX784172 BX784172 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 130B11, mRNA sequence
Length = 685
Score = 106 bits (230), Expect = 1e-022
Identities = 42/63 (66%), Positives = 49/63 (77%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
GAF+ EE LII LH++LGNRWSQIAA+LPGRTDNEIKN WNSCIKKKL+ N K
Sbjct: 263 GAFSPQEEQLIIHLHSILGNRWSQIAARLPGRTDNEIKNFWNSCIKKKLKHLSASTNNSK 442
Query: 184 PLT 192
++
Sbjct: 443 SIS 451
Score = 62.1 bits (132), Expect = 9e-010
Identities = 28/51 (54%), Positives = 30/51 (58%)
Frame = -2 / -2
Query: 155 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 3
C +FF M EF +FLISLSV PG AAI*DHL PR C NAP
Sbjct: 414 CFNFFFMQEFQKFLISLSVRPGKRAAI*DHLLPRMECRCMINCSSWGENAP 262
Score = 56.3 bits (119), Expect = 6e-008
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = -1 / -1
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGEC 7
QLLL A VP ILDL++ Q CNLRPPV E+ +Q+ D++FF+ +C
Sbjct: 409 QLLLYAGVPEILDLVVRTSGQTGCNLRPPVAENGMQVYDQLFFLG*KC 266
>gb|CO200901.1|CO200901 RTCNT2_2_G06.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_2_G06_A029 3', mRNA sequence
Length = 863
Score = 105 bits (228), Expect = 3e-022
Identities = 39/62 (62%), Positives = 53/62 (85%)
Frame = +1 / -3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+ +E++LII+LH+++GN+WS IAA+LPGRTDNEIKN WNS IK+KL +G DP +H+
Sbjct: 624 GNFSSEEDELIIQLHSLIGNKWSLIAAKLPGRTDNEIKNYWNSHIKRKLVSRGFDPGSHR 445
Query: 184 PL 189
PL
Sbjct: 444 PL 439
Score = 57.6 bits (122), Expect = 2e-008
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = -2 / +2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
G W GS P +F LM EF FLISLSV PG+ AAI DHLFP
Sbjct: 443 GRWDPGSNPLLTNFLLMWEFQ*FLISLSVRPGNFAAIRDHLFP 571
Score = 51.8 bits (109), Expect = 1e-006
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = -1 / +1
Query: 180 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 22
+G G+ + Q LD +P +LDL++ P Q CN RP V + ++LDDE+ F
Sbjct: 448 MGPGVESPAHQFSLDVGIPVVLDLVVRPSGQFCCNQRPLVSDKGMKLDDELIF 606
Score = 34.3 bits (70), Expect = 0.34
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3 / -2
Query: 60 EQVVSNCSAAARED***DQESMELVHQEE 146
+QVVS+CS AR D DQE +E HQE+
Sbjct: 568 KQVVSDCSKIARTDGQRDQELLEFPHQEK 482
>gb|DR167833.1|DR167833 RTPHOS1_21_A06.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_21_A06_A029 5', mRNA sequence
Length = 575
Score = 105 bits (228), Expect = 3e-022
Identities = 39/62 (62%), Positives = 53/62 (85%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+ +E++LII+LH+++GN+WS IAA+LPGRTDNEIKN WNS IK+KL +G DP +H+
Sbjct: 39 GNFSSEEDELIIQLHSLIGNKWSLIAAKLPGRTDNEIKNYWNSHIKRKLVSRGFDPGSHR 218
Query: 184 PL 189
PL
Sbjct: 219 PL 224
Score = 57.6 bits (122), Expect = 2e-008
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = -2 / -2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
G W GS P +F LM EF FLISLSV PG+ AAI DHLFP
Sbjct: 220 GRWDPGSNPLLTNFLLMWEFQ*FLISLSVRPGNFAAIRDHLFP 92
Score = 51.8 bits (109), Expect = 1e-006
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = -1 / -1
Query: 180 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 22
+G G+ + Q LD +P +LDL++ P Q CN RP V + ++LDDE+ F
Sbjct: 215 MGPGVESPAHQFSLDVGIPVVLDLVVRPSGQFCCNQRPLVSDKGMKLDDELIF 57
Score = 34.3 bits (70), Expect = 0.34
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3 / +2
Query: 60 EQVVSNCSAAARED***DQESMELVHQEE 146
+QVVS+CS AR D DQE +E HQE+
Sbjct: 95 KQVVSDCSKIARTDGQRDQELLEFPHQEK 181
>gb|BX250447.1|BX250447 BX250447 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP037A09, mRNA sequence
Length = 399
Score = 104 bits (227), Expect = 3e-022
Identities = 38/62 (61%), Positives = 54/62 (87%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL +G+DP +H+
Sbjct: 30 GNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGLDPQSHR 209
Query: 184 PL 189
PL
Sbjct: 210 PL 215
Score = 57.2 bits (121), Expect = 3e-008
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = -1 / -2
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G G AV+ L++ + +G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 257 GHRGADSVAVVRLAEGAMRLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAE* 78
Query: 51 SVQLDDEVFF 22
V+ DDE F
Sbjct: 77 GVEFDDEFVF 48
Score = 42.8 bits (89), Expect = 8e-004
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -3
Query: 170 GSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
GS P +F LM F F ISLSV PG+ AI DHL P
Sbjct: 196 GSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLP 83
>gb|CF387084.1|CF387084 RTDR1_10_E10.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_10_E10_A015 5', mRNA
sequence
Length = 733
Score = 104 bits (227), Expect = 3e-022
Identities = 38/62 (61%), Positives = 54/62 (87%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL +G+DP +H+
Sbjct: 213 GNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGLDPQSHR 392
Query: 184 PL 189
PL
Sbjct: 393 PL 398
Score = 62.1 bits (132), Expect = 9e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -3
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G G AV+ L++ +G+G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 440 GQRGAGRVAVVRLAEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAEQ 261
Query: 51 SVQLDDEVFF 22
V+ DDE F
Sbjct: 260 GVEFDDEFVF 231
Score = 47.3 bits (99), Expect = 3e-005
Identities = 23/43 (53%), Positives = 25/43 (58%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
G W GS P +F LM F F ISLSV PG+ AI DHL P
Sbjct: 394 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLP 266
>gb|CF388213.1|CF388213 RTDR2_1_B07.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_1_B07_A021 5', mRNA
sequence
Length = 712
Score = 104 bits (227), Expect = 3e-022
Identities = 38/62 (61%), Positives = 54/62 (87%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL +G+DP +H+
Sbjct: 255 GNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGLDPQSHR 434
Query: 184 PL 189
PL
Sbjct: 435 PL 440
Score = 62.1 bits (132), Expect = 9e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -3
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G G AV+ L++ +G+G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 482 GQRGAGRVAVVRLAEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAEQ 303
Query: 51 SVQLDDEVFF 22
V+ DDE F
Sbjct: 302 GVEFDDEFVF 273
Score = 47.3 bits (99), Expect = 3e-005
Identities = 23/43 (53%), Positives = 25/43 (58%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
G W GS P +F LM F F ISLSV PG+ AI DHL P
Sbjct: 436 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLP 308
>gb|CF401126.1|CF401126 RTWW1_10_H02.b1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_10_H02_A015 3', mRNA sequence
Length = 620
Score = 104 bits (227), Expect = 3e-022
Identities = 38/62 (61%), Positives = 54/62 (87%)
Frame = +1 / -2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL +G+DP +H+
Sbjct: 406 GNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGLDPQSHR 227
Query: 184 PL 189
PL
Sbjct: 226 PL 221
Score = 62.1 bits (132), Expect = 9e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / +2
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G G AV+ L++ +G+G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 179 GQRGAGRVAVVRLAEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAEQ 358
Query: 51 SVQLDDEVFF 22
V+ DDE F
Sbjct: 359 GVEFDDEFVF 388
Score = 47.3 bits (99), Expect = 3e-005
Identities = 23/43 (53%), Positives = 25/43 (58%)
Frame = -2 / +3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
G W GS P +F LM F F ISLSV PG+ AI DHL P
Sbjct: 225 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLP 353
>gb|BX681391.1|BX681391 BX681391 RS Pinus pinaster cDNA clone RS58C06, mRNA sequence
Length = 605
Score = 104 bits (227), Expect = 3e-022
Identities = 38/62 (61%), Positives = 54/62 (87%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL +G+DP +H+
Sbjct: 201 GNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGLDPQSHR 380
Query: 184 PL 189
PL
Sbjct: 381 PL 386
Score = 57.2 bits (121), Expect = 3e-008
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = -1 / -1
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G G AV+ L++ + +G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 428 GHRGADSVAVVRLAEGAMRLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAE* 249
Query: 51 SVQLDDEVFF 22
V+ DDE F
Sbjct: 248 GVEFDDEFVF 219
Score = 42.8 bits (89), Expect = 8e-004
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -2
Query: 170 GSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
GS P +F LM F F ISLSV PG+ AI DHL P
Sbjct: 367 GSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLP 254
>gb|CX650454.1|CX650454 COLD1_45_F10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_45_F10_A029 5', mRNA sequence
Length = 826
Score = 104 bits (227), Expect = 3e-022
Identities = 38/62 (61%), Positives = 54/62 (87%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL +G+DP +H+
Sbjct: 244 GNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGLDPQSHR 423
Query: 184 PL 189
PL
Sbjct: 424 PL 429
Score = 62.1 bits (132), Expect = 9e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -2
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G G AV+ L++ +G+G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 471 GQRGAGRVAVVRLAEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAEQ 292
Query: 51 SVQLDDEVFF 22
V+ DDE F
Sbjct: 291 GVEFDDEFVF 262
Score = 47.3 bits (99), Expect = 3e-005
Identities = 23/43 (53%), Positives = 25/43 (58%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
G W GS P +F LM F F ISLSV PG+ AI DHL P
Sbjct: 425 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLP 297
>gb|DR024153.1|DR024153 STRS1_62_E05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_62_E05_A034 5', mRNA sequence
Length = 791
Score = 104 bits (227), Expect = 3e-022
Identities = 38/62 (61%), Positives = 54/62 (87%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL +G+DP +H+
Sbjct: 239 GNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGLDPQSHR 418
Query: 184 PL 189
PL
Sbjct: 419 PL 424
Score = 62.1 bits (132), Expect = 9e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -2
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G G AV+ L++ +G+G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 466 GQRGAGRVAVVRLAEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAEQ 287
Query: 51 SVQLDDEVFF 22
V+ DDE F
Sbjct: 286 GVEFDDEFVF 257
Score = 47.3 bits (99), Expect = 3e-005
Identities = 23/43 (53%), Positives = 25/43 (58%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
G W GS P +F LM F F ISLSV PG+ AI DHL P
Sbjct: 420 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLP 292
>gb|DR060728.1|DR060728 RTNIT1_29_D06.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_29_D06_A029 5', mRNA sequence
Length = 726
Score = 104 bits (227), Expect = 3e-022
Identities = 38/62 (61%), Positives = 54/62 (87%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL +G+DP +H+
Sbjct: 227 GNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGLDPQSHR 406
Query: 184 PL 189
PL
Sbjct: 407 PL 412
Score = 62.1 bits (132), Expect = 9e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -3
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G G AV+ L++ +G+G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 454 GQRGAGRVAVVRLAEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAEQ 275
Query: 51 SVQLDDEVFF 22
V+ DDE F
Sbjct: 274 GVEFDDEFVF 245
Score = 47.3 bits (99), Expect = 3e-005
Identities = 23/43 (53%), Positives = 25/43 (58%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
G W GS P +F LM F F ISLSV PG+ AI DHL P
Sbjct: 408 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLP 280
>gb|DR111240.1|DR111240 RTS1_16_G05.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_16_G05_A029 3', mRNA sequence
Length = 625
Score = 104 bits (227), Expect = 3e-022
Identities = 38/62 (61%), Positives = 54/62 (87%)
Frame = +1 / -3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL +G+DP +H+
Sbjct: 437 GNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGLDPQSHR 258
Query: 184 PL 189
PL
Sbjct: 257 PL 252
Score = 62.1 bits (132), Expect = 9e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / +3
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G G AV+ L++ +G+G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 210 GQRGAGRVAVVRLAEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAEQ 389
Query: 51 SVQLDDEVFF 22
V+ DDE F
Sbjct: 390 GVEFDDEFVF 419
Score = 47.3 bits (99), Expect = 3e-005
Identities = 23/43 (53%), Positives = 25/43 (58%)
Frame = -2 / +1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
G W GS P +F LM F F ISLSV PG+ AI DHL P
Sbjct: 256 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLP 384
>gb|DR694473.1|DR694473 EST1084565 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEC94 3' end, mRNA sequence
Length = 822
Score = 104 bits (227), Expect = 3e-022
Identities = 45/82 (54%), Positives = 56/82 (68%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G ++ EE LII+LH+ LGNRWS+IAA LPGRTDNEIKN WN+ IKKKL++ GIDP T
Sbjct: 282 GLLSESEEQLIIDLHSQLGNRWSKIAAHLPGRTDNEIKNYWNTHIKKKLKRMGIDPVTRG 461
Query: 184 PLTEADHGGAAPTISTERTSGS 249
P+ + G + E T S
Sbjct: 462 PIIDQAEGKPSKPALDEVTEES 527
Score = 58.5 bits (124), Expect = 1e-008
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = -2 / -3
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
S+ G V GS+P SFFL+ F FLISLSV PG CAAI DHL P
Sbjct: 472 SIMGPRVTGSIPMRFSFFLI*VFQ*FLISLSVRPGKCAAILDHLLP 335
Score = 52.7 bits (111), Expect = 7e-007
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -1 / -2
Query: 171 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 22
GI++ QLLLD VP ILD II P Q+ NLRPPV E +++++E+ F
Sbjct: 449 GIDSHALQLLLDMSVPVILDFIICPSRQVCGNLRPPVTELGMEINNELLF 300
Score = 31.6 bits (64), Expect = 2.3
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +2 / +1
Query: 86 SCQGGLIMRSRIYGTRASRRS*GRKALIP 172
+C G IM+SRI GT SRRS* IP
Sbjct: 364 TCLDGQIMKSRITGTLISRRS*SAWESIP 450
Score = 30.7 bits (62), Expect = 4.3
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3 / +2
Query: 63 QVVSNCSAAARED***DQESMELVHQEEAEA 155
QVV +C A D **+QE +E +QEEAEA
Sbjct: 341 QVV*DCRTLAWTDR**NQELLEHSYQEEAEA 433
>gb|DT638742.1|DT638742 EST1153673 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHI92 3' end, mRNA sequence
Length = 822
Score = 104 bits (227), Expect = 3e-022
Identities = 45/82 (54%), Positives = 56/82 (68%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G ++ EE LII+LH+ LGNRWS+IAA LPGRTDNEIKN WN+ IKKKL++ GIDP T
Sbjct: 290 GLLSESEEQLIIDLHSQLGNRWSKIAAHLPGRTDNEIKNYWNTHIKKKLKRMGIDPVTRG 469
Query: 184 PLTEADHGGAAPTISTERTSGS 249
P+ + G + E T S
Sbjct: 470 PIIDQAEGKPSKPALDEVTEES 535
Score = 58.5 bits (124), Expect = 1e-008
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = -2 / -1
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
S+ G V GS+P SFFL+ F FLISLSV PG CAAI DHL P
Sbjct: 480 SIMGPRVTGSIPMRFSFFLI*VFQ*FLISLSVRPGKCAAILDHLLP 343
Score = 52.7 bits (111), Expect = 7e-007
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -1 / -3
Query: 171 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 22
GI++ QLLLD VP ILD II P Q+ NLRPPV E +++++E+ F
Sbjct: 457 GIDSHALQLLLDMSVPVILDFIICPSRQVCGNLRPPVTELGMEINNELLF 308
Score = 31.6 bits (64), Expect = 2.3
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +2 / +3
Query: 86 SCQGGLIMRSRIYGTRASRRS*GRKALIP 172
+C G IM+SRI GT SRRS* IP
Sbjct: 372 TCLDGQIMKSRITGTLISRRS*SAWESIP 458
Score = 30.7 bits (62), Expect = 4.3
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3 / +1
Query: 63 QVVSNCSAAARED***DQESMELVHQEEAEA 155
QVV +C A D **+QE +E +QEEAEA
Sbjct: 349 QVV*DCRTLAWTDR**NQELLEHSYQEEAEA 441
>gb|CF393225.1|CF393225 RTDR3_17_D12.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_17_D12_A022 5', mRNA
sequence
Length = 659
Score = 103 bits (225), Expect = 7e-022
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T +
Sbjct: 244 GGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRR 423
Query: 184 P 186
P
Sbjct: 424 P 426
Score = 57.6 bits (122), Expect = 2e-008
Identities = 28/48 (58%), Positives = 30/48 (62%)
Frame = -2 / -1
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC
Sbjct: 428 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRAC 285
Score = 46.4 bits (97), Expect = 6e-005
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1 / -3
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+
Sbjct: 429 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFI 259
>gb|CF472757.1|CF472757 RTDS1_11_D09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_11_D09_A015 5', mRNA sequence
Length = 667
Score = 103 bits (225), Expect = 7e-022
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T +
Sbjct: 215 GGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRR 394
Query: 184 P 186
P
Sbjct: 395 P 397
Score = 57.6 bits (122), Expect = 2e-008
Identities = 28/48 (58%), Positives = 30/48 (62%)
Frame = -2 / -2
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC
Sbjct: 399 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRAC 256
Score = 46.4 bits (97), Expect = 6e-005
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1 / -1
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+
Sbjct: 400 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFI 230
>gb|CO162486.1|CO162486 FLD1_35_D02.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_35_D02_A029 5', mRNA sequence
Length = 779
Score = 103 bits (225), Expect = 7e-022
Identities = 39/61 (63%), Positives = 53/61 (86%)
Frame = +1 / -3
Query: 7 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 186
+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+P
Sbjct: 777 SFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRP 598
Query: 187 L 189
L
Sbjct: 597 L 595
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / +1
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 565 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 744
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 745 DDEFVFFFCE 774
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / +2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 599 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 733
>gb|CO365658.1|CO365658 RTK1_18_A01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_18_A01_A029 5', mRNA sequence
Length = 812
Score = 103 bits (225), Expect = 7e-022
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T +
Sbjct: 163 GGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRR 342
Query: 184 P 186
P
Sbjct: 343 P 345
Score = 57.6 bits (122), Expect = 2e-008
Identities = 28/48 (58%), Positives = 30/48 (62%)
Frame = -2 / -1
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC
Sbjct: 347 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRAC 204
Score = 46.4 bits (97), Expect = 6e-005
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1 / -3
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+
Sbjct: 348 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFI 178
>gb|CO367106.1|CO367106 RTK1_32_E03.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_E03_A029 3', mRNA sequence
Length = 867
Score = 103 bits (225), Expect = 7e-022
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T +
Sbjct: 6 GGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRR 185
Query: 184 P 186
P
Sbjct: 186 P 188
Score = 57.6 bits (122), Expect = 2e-008
Identities = 28/48 (58%), Positives = 30/48 (62%)
Frame = -2 / -3
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC
Sbjct: 190 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRAC 47
Score = 46.4 bits (97), Expect = 6e-005
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1 / -2
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+
Sbjct: 191 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFI 21
>gb|CO367178.1|CO367178 RTK1_32_E03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_E03_A029 5', mRNA sequence
Length = 873
Score = 103 bits (225), Expect = 7e-022
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T +
Sbjct: 217 GGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRR 396
Query: 184 P 186
P
Sbjct: 397 P 399
Score = 57.6 bits (122), Expect = 2e-008
Identities = 28/48 (58%), Positives = 30/48 (62%)
Frame = -2 / -2
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC
Sbjct: 401 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRAC 258
Score = 46.4 bits (97), Expect = 6e-005
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1 / -1
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+
Sbjct: 402 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFI 232
>gb|DR011035.1|DR011035 HEAT1_3_A03.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_3_A03_A029 3', mRNA sequence
Length = 790
Score = 103 bits (225), Expect = 7e-022
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = +1 / -1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T +
Sbjct: 580 GGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRR 401
Query: 184 P 186
P
Sbjct: 400 P 398
Score = 57.6 bits (122), Expect = 2e-008
Identities = 28/48 (58%), Positives = 30/48 (62%)
Frame = -2 / +3
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC
Sbjct: 396 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRAC 539
Score = 46.4 bits (97), Expect = 6e-005
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1 / +2
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+
Sbjct: 395 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFI 565
>gb|DR014928.1|DR014928 HEAT1_52_A11.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_52_A11_A029 5', mRNA sequence
Length = 854
Score = 103 bits (225), Expect = 7e-022
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T +
Sbjct: 166 GGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRR 345
Query: 184 P 186
P
Sbjct: 346 P 348
Score = 57.6 bits (122), Expect = 2e-008
Identities = 28/48 (58%), Positives = 30/48 (62%)
Frame = -2 / -1
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC
Sbjct: 350 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRAC 207
Score = 46.4 bits (97), Expect = 6e-005
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1 / -3
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+
Sbjct: 351 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFI 181
>gb|DR023090.1|DR023090 STRS1_55_A05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_55_A05_A034 5', mRNA sequence
Length = 752
Score = 103 bits (225), Expect = 7e-022
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T +
Sbjct: 222 GGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRR 401
Query: 184 P 186
P
Sbjct: 402 P 404
Score = 57.6 bits (122), Expect = 2e-008
Identities = 28/48 (58%), Positives = 30/48 (62%)
Frame = -2 / -2
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC
Sbjct: 406 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRAC 263
Score = 46.4 bits (97), Expect = 6e-005
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1 / -1
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+
Sbjct: 407 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFI 237
>gb|DR059765.1|DR059765 RTNIT1_19_D08.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_19_D08_A029 5', mRNA sequence
Length = 832
Score = 103 bits (225), Expect = 7e-022
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = +1 / -2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T +
Sbjct: 825 GGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRR 646
Query: 184 P 186
P
Sbjct: 645 P 643
Score = 57.6 bits (122), Expect = 2e-008
Identities = 28/48 (58%), Positives = 30/48 (62%)
Frame = -2 / +2
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC
Sbjct: 641 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRAC 784
Score = 46.4 bits (97), Expect = 6e-005
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1 / +1
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+
Sbjct: 640 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFI 810
>gb|DR099337.1|DR099337 STRR1_54_G08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_54_G08_A033 5', mRNA sequence
Length = 499
Score = 103 bits (225), Expect = 7e-022
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T +
Sbjct: 192 GGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRR 371
Query: 184 P 186
P
Sbjct: 372 P 374
Score = 57.6 bits (122), Expect = 2e-008
Identities = 28/48 (58%), Positives = 30/48 (62%)
Frame = -2 / -1
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC
Sbjct: 376 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRAC 233
Score = 46.4 bits (97), Expect = 6e-005
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1 / -3
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+
Sbjct: 377 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFI 207
>gb|DR161451.1|DR161451 RTFE1_11_H03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_11_H03_A029 5', mRNA sequence
Length = 669
Score = 103 bits (225), Expect = 7e-022
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T +
Sbjct: 222 GGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRR 401
Query: 184 P 186
P
Sbjct: 402 P 404
Score = 57.6 bits (122), Expect = 2e-008
Identities = 28/48 (58%), Positives = 30/48 (62%)
Frame = -2 / -3
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC
Sbjct: 406 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRAC 263
Score = 46.4 bits (97), Expect = 6e-005
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1 / -2
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+
Sbjct: 407 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFI 237
>gb|DR164052.1|DR164052 RTFE1_46_B11.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_46_B11_A029 5', mRNA sequence
Length = 834
Score = 103 bits (225), Expect = 7e-022
Identities = 39/62 (62%), Positives = 53/62 (85%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G+F ++E++LII+LH+V+GN+WS IA +LPGR DNEIKN WN+ IK+KL KGIDP +H+
Sbjct: 243 GSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRMDNEIKNYWNTHIKRKLLIKGIDPQSHR 422
Query: 184 PL 189
PL
Sbjct: 423 PL 428
Score = 63.0 bits (134), Expect = 5e-010
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -1 / -2
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 458 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVHPPRQSSCNKRPLVADDGVEF 279
Query: 39 DDEVFFVLGE 10
DDE F E
Sbjct: 278 DDEFVFFFCE 249
Score = 50.0 bits (105), Expect = 5e-006
Identities = 23/45 (51%), Positives = 27/45 (60%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLS+ PG+ AI DHL P T
Sbjct: 424 GRWDWGSIPLISNFLLM*VFQ*FFISLSIRPGNLPAIRDHLLPTT 290
>gb|AW011253.1|AW011253 ST18F02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST18F02, mRNA sequence
Length = 578
Score = 103 bits (224), Expect = 9e-022
Identities = 37/62 (59%), Positives = 55/62 (88%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+ +E+++II+LH++LGN+WS IA++LPGRTDNEIKN WN+ IK+K+ ++G+DP+TH
Sbjct: 218 GNFSPEEDEIIIKLHSMLGNKWSLIASKLPGRTDNEIKNYWNTHIKRKMLERGLDPSTHL 397
Query: 184 PL 189
PL
Sbjct: 398 PL 403
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/47 (51%), Positives = 27/47 (57%)
Frame = -2 / -3
Query: 197 ASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
+ + G WV GS P F LM F F ISLSV PG+ AI DHL P
Sbjct: 411 SDIKGRWVEGSRPLSNIFLLM*VFQ*FFISLSVRPGNLLAIKDHLLP 271
Score = 44.6 bits (93), Expect = 2e-004
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -1 / -2
Query: 141 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPP 1
L+ VP IL LII PWQ C+ RP V + ++ D+++ F E P
Sbjct: 355 LNVSVPVILYLIICSPWQFACDQRPLVTQHRMKFDNDLIFFWAEIAP 215
>gb|AY356371.1| Pinus taeda R2R3-MYB transcription factor (MYB4) mRNA, complete cds
Length = 945
Score = 102 bits (223), Expect = 1e-021
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
GAF+ EE II LH++LGNRWSQIAA+LPGRTDNEIKN WNSCIKKKL+ N K
Sbjct: 217 GAFSPQEEHWIIHLHSILGNRWSQIAARLPGRTDNEIKNFWNSCIKKKLKHLSASTNNSK 396
Query: 184 PLT 192
++
Sbjct: 397 SIS 405
Score = 62.6 bits (133), Expect = 7e-010
Identities = 28/51 (54%), Positives = 31/51 (60%)
Frame = -2 / -2
Query: 155 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 3
C +FF M EF +FLISLSV PG+ AAI*DHL PR C NAP
Sbjct: 368 CFNFFFMQEFQKFLISLSVRPGNRAAI*DHLLPRMECKCMIQCSSWGENAP 216
Score = 54.0 bits (114), Expect = 3e-007
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = -1 / -1
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGEC 7
QLLL A VP ILDL++ Q CNLRPPV E+ +Q+ D +FF+ +C
Sbjct: 363 QLLLYAGVPEILDLVVRTSGQPGCNLRPPVAENGMQVYDPMFFLG*KC 220
>gb|CO361899.1|CO361899 NDL2_7_G04.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_7_G04_A029 5', mRNA sequence
Length = 871
Score = 102 bits (222), Expect = 2e-021
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G DEE+LII +HA+LGNRWS IA ++PGRTDNEIKN WN+ + KKL +GIDP THK
Sbjct: 204 GNITTDEEELIIRMHALLGNRWSIIAGRVPGRTDNEIKNYWNTNLSKKLAVRGIDPKTHK 383
Query: 184 PLT 192
+T
Sbjct: 384 KIT 392
Score = 53.6 bits (113), Expect = 4e-007
Identities = 25/44 (56%), Positives = 28/44 (63%)
Frame = -2 / -1
Query: 176 VLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
VLGS+P SF L F F ISLSV PG+ AI DHL P+ AC
Sbjct: 376 VLGSIPLTASFLLKLVFQ*FFISLSVRPGTLPAIIDHLLPKRAC 245
>gb|BE241255.1|BE241255 NXNV_183_D12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_183_D12 5' similar to Arabidopsis thaliana
sequence At5g12870 putative transcription factor (MYB46)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 419
Score = 101 bits (221), Expect = 2e-021
Identities = 40/62 (64%), Positives = 48/62 (77%)
Frame = +1 / +2
Query: 7 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 186
AF+ EE LII LH++LGNRWSQI+A+LPGRTDNEIKN WNSCIKKKL+ N K
Sbjct: 2 AFSPQEEQLIIHLHSILGNRWSQISARLPGRTDNEIKNFWNSCIKKKLKHLSASTNNSKS 181
Query: 187 LT 192
++
Sbjct: 182 IS 187
Score = 58.1 bits (123), Expect = 2e-008
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = -2 / -3
Query: 155 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
C +FF M EF +FLISLSV PG A I*DHL PR C
Sbjct: 150 CFNFFFMQEFQKFLISLSVRPGKRAEI*DHLLPRMEC 40
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = -1 / -2
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGEC 7
QLLL A VP ILDL++ Q NLRPPV E+ +Q+ D++FF+ +C
Sbjct: 145 QLLLYAGVPEILDLVVRTSGQTG*NLRPPVAENGMQVYDQLFFLG*KC 2
>gb|DR015297.1|DR015297 STRS1_2_D10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_D10_A034 5', mRNA sequence
Length = 871
Score = 101 bits (220), Expect = 3e-021
Identities = 39/59 (66%), Positives = 50/59 (84%)
Frame = +1 / +1
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 186
F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +KKKL G+DP T +P
Sbjct: 4 FSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKKKLISIGVDPLTRRP 180
Score = 60.3 bits (128), Expect = 3e-009
Identities = 29/48 (60%), Positives = 31/48 (64%)
Frame = -2 / -3
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+G V GS P +SFF EF FLISLSV PG AI DHLFPR AC
Sbjct: 182 NGRRVRGSTPMLMSFFFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRAC 39
Score = 46.4 bits (97), Expect = 6e-005
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1 / -2
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+
Sbjct: 183 KWTTGQGIDPNADEFFLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFI 13
>gb|DR161095.1|DR161095 RTFE1_9_G03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_9_G03_A029 5', mRNA sequence
Length = 760
Score = 101 bits (220), Expect = 3e-021
Identities = 38/62 (61%), Positives = 52/62 (83%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+ +E++LII+LH+++GN+WS IAA+LPGRTDNEIKN WNS IK+KL +G DP +H+
Sbjct: 251 GNFSSEEDELIIQLHSLIGNKWSLIAAKLPGRTDNEIKNYWNSHIKRKLVSRGFDPRSHR 430
Query: 184 PL 189
L
Sbjct: 431 TL 436
Score = 56.3 bits (119), Expect = 6e-008
Identities = 26/41 (63%), Positives = 28/41 (68%)
Frame = -2 / -2
Query: 179 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
W LGS P +F LM EF FLISLSV PG+ AAI DHL P
Sbjct: 426 WDLGSNPLLTNFLLMWEFQ*FLISLSVRPGNFAAIRDHLLP 304
Score = 48.7 bits (102), Expect = 1e-005
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1 / -1
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 22
Q LD VP +LDL++ P Q CN RP V + ++LDDE+ F
Sbjct: 397 QFSLDVGVPVVLDLVVRPSGQFCCNQRPLVADKGMKLDDELIF 269
Score = 36.6 bits (75), Expect = 0.069
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3 / +1
Query: 60 EQVVSNCSAAARED***DQESMELVHQEE 146
+QVVS+CS AR D DQE +EL HQE+
Sbjct: 307 QQVVSDCSKIARTDGQRDQELLELPHQEK 393
>gb|BF517838.1|BF517838 NXSI_027_G09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_027_G09 5' similar to Arabidopsis thaliana
sequence At4g38620 putative transcription factor (MYB4)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 494
Score = 100 bits (218), Expect = 6e-021
Identities = 37/62 (59%), Positives = 52/62 (83%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G +++E++LII+LH++LGN+WS IA LPGRTDNEIKN WN+ IK+KL +G+DP +H+
Sbjct: 294 GNXSEEEDELIIKLHSLLGNKWSLIAXXLPGRTDNEIKNYWNTHIKRKLLNRGLDPQSHR 473
Query: 184 PL 189
PL
Sbjct: 474 PL 479
Score = 54.9 bits (116), Expect = 2e-007
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = -1 / -1
Query: 204 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 25
V+ + +G+G+ + + Q LD +P +L L++ PP Q CN RP V E V+ DDE
Sbjct: 494 VVRXXEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSXCNKRPLVAEQGVEFDDEFV 315
Query: 24 F 22
F
Sbjct: 314 F 312
Score = 47.3 bits (99), Expect = 3e-005
Identities = 23/43 (53%), Positives = 25/43 (58%)
Frame = -2 / -2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
G W GS P +F LM F F ISLSV PG+ AI DHL P
Sbjct: 475 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNXXAIRDHLLP 347
>gb|CX648339.1|CX648339 COLD1_28_B12.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_28_B12_A029 3', mRNA sequence
Length = 868
Score = 100 bits (218), Expect = 6e-021
Identities = 38/58 (65%), Positives = 51/58 (87%)
Frame = +1 / +1
Query: 16 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 189
++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 4 EEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 177
Score = 62.6 bits (133), Expect = 7e-010
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = -1 / -2
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 40
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 207 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 28
Query: 39 DDEVFF 22
DDE F
Sbjct: 27 DDEFVF 10
Score = 50.5 bits (106), Expect = 4e-006
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 173 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 39
>gb|CF395899.1|CF395899 RTDS2_19_G06.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_19_G06_A021 5', mRNA sequence
Length = 586
Score = 100 bits (217), Expect = 8e-021
Identities = 37/62 (59%), Positives = 53/62 (85%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+LH++LGN+WS IAA++ GRTDNEIKN WN+ IK+KL +G+DP TH+
Sbjct: 174 GNFSEEEDELIIKLHSLLGNKWSLIAARMAGRTDNEIKNYWNTHIKRKLLSRGLDPQTHR 353
Query: 184 PL 189
L
Sbjct: 354 SL 359
Score = 55.8 bits (118), Expect = 8e-008
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = -1 / -3
Query: 207 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 28
AV+ ++ +G+GI + Q D VP IL LI+ PP RCN RP V + ++ DD++
Sbjct: 377 AVVGRTQGAMGLGIESSAQQFPFDVGVPVILYLIVRPPGHSRCNKRPFVAQKRMEFDDKL 198
Query: 27 FFVLGE 10
F L E
Sbjct: 197 VFFLRE 180
Score = 50.9 bits (107), Expect = 3e-006
Identities = 24/43 (55%), Positives = 26/43 (60%)
Frame = -2 / -1
Query: 179 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
WV GS P +F LM F F ISLSV P AAI DHL PR+
Sbjct: 349 WVWGSSPLLSNFLLMWVFQ*FFISLSVRPAILAAIRDHLLPRS 221
>gb|CO201585.1|CO201585 RTCNT2_6_F07.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_6_F07_A029 5', mRNA sequence
Length = 859
Score = 100 bits (217), Expect = 8e-021
Identities = 37/62 (59%), Positives = 53/62 (85%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+LH++LGN+WS IAA++ GRTDNEIKN WN+ IK+KL +G+DP TH+
Sbjct: 132 GNFSEEEDELIIKLHSLLGNKWSLIAARMAGRTDNEIKNYWNTHIKRKLLSRGLDPQTHR 311
Query: 184 PL 189
L
Sbjct: 312 SL 317
Score = 55.8 bits (118), Expect = 8e-008
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = -1 / -3
Query: 207 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 28
AV+ ++ +G+GI + Q D VP IL LI+ PP RCN RP V + ++ DD++
Sbjct: 335 AVVGRTQGAMGLGIESSAQQFPFDVGVPVILYLIVRPPGHSRCNKRPFVAQKRMEFDDKL 156
Query: 27 FFVLGE 10
F L E
Sbjct: 155 VFFLRE 138
Score = 50.9 bits (107), Expect = 3e-006
Identities = 24/43 (55%), Positives = 26/43 (60%)
Frame = -2 / -1
Query: 179 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
WV GS P +F LM F F ISLSV P AAI DHL PR+
Sbjct: 307 WVWGSSPLLSNFLLMWVFQ*FFISLSVRPAILAAIRDHLLPRS 179
>gb|DR163874.1|DR163874 RTFE1_45_A12.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_45_A12_A029 5', mRNA sequence
Length = 896
Score = 100 bits (217), Expect = 8e-021
Identities = 37/62 (59%), Positives = 53/62 (85%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+LH++LGN+WS IAA++ GRTDNEIKN WN+ IK+KL +G+DP TH+
Sbjct: 161 GNFSEEEDELIIKLHSLLGNKWSLIAARMAGRTDNEIKNYWNTHIKRKLLSRGLDPQTHR 340
Query: 184 PL 189
L
Sbjct: 341 SL 346
Score = 55.8 bits (118), Expect = 8e-008
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = -1 / -2
Query: 207 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 28
AV+ ++ +G+GI + Q D VP IL LI+ PP RCN RP V + ++ DD++
Sbjct: 364 AVVGRTQGAMGLGIESSAQQFPFDVGVPIILYLIVRPPGHSRCNKRPFVAQKRMEFDDKL 185
Query: 27 FFVLGE 10
F L E
Sbjct: 184 VFFLRE 167
Score = 50.9 bits (107), Expect = 3e-006
Identities = 24/43 (55%), Positives = 26/43 (60%)
Frame = -2 / -3
Query: 179 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
WV GS P +F LM F F ISLSV P AAI DHL PR+
Sbjct: 336 WVWGSSPLLSNFLLMWVFQ*FFISLSVRPAILAAIRDHLLPRS 208
>gb|DR052727.1|DR052727 RTCA1_6_B03.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_6_B03_A029 5', mRNA sequence
Length = 801
Score = 99.8 bits (216), Expect = 1e-020
Identities = 39/68 (57%), Positives = 54/68 (79%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII+L ++LGN+WS IA +L RTDNEIKN WN+ IK+KL KG+DP TH+
Sbjct: 134 GNFSEEEDELIIKLRSLLGNKWSLIAGRLSWRTDNEIKNYWNTHIKRKLLSKGLDPQTHR 313
Query: 184 PLTEADHG 207
PL E +G
Sbjct: 314 PLGEPYNG 337
Score = 47.3 bits (99), Expect = 3e-005
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = -1 / -3
Query: 207 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 28
A++ L+ V +GI + Q L VP +L L++ P Q CN RP V E + DDE+
Sbjct: 337 AIVGLA*RTVRLGIESLA*QFSLYMSVPVVLYLVVRAPGQSPCNKRPLVAEKGAEFDDEL 158
Query: 27 FFVLGE 10
F E
Sbjct: 157 VFFFRE 140
Score = 39.7 bits (82), Expect = 0.007
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = -2 / -1
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
S SG V GS P +F + F F ISLSV + AI DHL PR
Sbjct: 324 SPSGRCVWGSSPLLSNFLFI*VFQ*FFISLSVRQDNLPAIRDHLLPR 184
>gb|CF396247.1|CF396247 RTDS2_15_B11.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_15_B11_A021 5', mRNA sequence
Length = 821
Score = 81.8 bits (176), Expect(2) = 1e-020
Identities = 32/53 (60%), Positives = 38/53 (71%)
Frame = +1 / +1
Query: 61 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAP 219
NRWS IA +LPGRTDNEIKN WNS +K+KL GIDP TH+P + H +P
Sbjct: 172 NRWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGIDPLTHRPFQKTSHHHPSP 330
Score = 48.2 bits (101), Expect = 2e-005
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 63
G WV GS+P +SF EF F ISLSV PG AI DHL
Sbjct: 296 GRWVRGSIPMLISFRFRCEFQ*FFISLSVRPGKRPAIKDHL 174
Score = 37.0 bits (76), Expect(2) = 1e-020
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGN 63
G F++DE+DLI++LHA+LGN
Sbjct: 112 GFFSEDEDDLILKLHALLGN 171
Score = 36.1 bits (74), Expect = 0.094
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -1 / -3
Query: 204 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPV 61
V SL K +G G+ + + L RVP +L L+I WQ RPPV
Sbjct: 315 VRSLLKRTMG*GVYSHADKFSLQMRVPVVLYLVICSSWQTASYQRPPV 172
>gb|CO366297.1|CO366297 RTK1_27_B09.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_27_B09_A029 3', mRNA sequence
Length = 904
Score = 98.9 bits (214), Expect = 2e-020
Identities = 39/61 (63%), Positives = 47/61 (77%)
Frame = +1 / -1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+ EE II LH +LGNRWS IA+ LPGRTDNEIKN+WN+ +KK+L Q G+DP TH
Sbjct: 718 GNFSLKEEQTIIHLHQILGNRWSAIASHLPGRTDNEIKNVWNTHLKKRLLQIGVDPVTHA 539
Query: 184 P 186
P
Sbjct: 538 P 536
Score = 64.8 bits (138), Expect = 1e-010
Identities = 28/47 (59%), Positives = 28/47 (59%)
Frame = -2 / +3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
G WV GS P C F FH F ISLSVLPG C AI DH FPR C
Sbjct: 537 GAWVTGSTPICRRRFFK*VFHTFFISLSVLPGRCEAIADHRFPRI*C 677
Score = 31.2 bits (63), Expect = 3.1
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -1 / +2
Query: 180 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 4
VG + L + VP I LII ++ N P VP+D +Q+++ + F+ E P
Sbjct: 542 VGYWVYPNLQEAFFQMSVPYIFYLIICSSGEV*GNS*PSVPKDLMQMNNSLLFLETEVP 718
>gb|DR167765.1|DR167765 RTPHOS1_20_H05.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_20_H05_A029 5', mRNA sequence
Length = 806
Score = 98.9 bits (214), Expect = 2e-020
Identities = 39/61 (63%), Positives = 47/61 (77%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+ EE II LH +LGNRWS IA+ LPGRTDNEIKN+WN+ +KK+L Q G+DP TH
Sbjct: 164 GNFSLKEEQTIIHLHQILGNRWSAIASHLPGRTDNEIKNVWNTHLKKRLLQIGVDPVTHA 343
Query: 184 P 186
P
Sbjct: 344 P 346
Score = 64.8 bits (138), Expect = 1e-010
Identities = 28/47 (59%), Positives = 28/47 (59%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
G WV GS P C F FH F ISLSVLPG C AI DH FPR C
Sbjct: 345 GAWVTGSTPICRRRFFK*VFHTFFISLSVLPGRCEAIADHRFPRI*C 205
Score = 31.2 bits (63), Expect = 3.1
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -1 / -2
Query: 180 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 4
VG + L + VP I LII ++ N P VP+D +Q+++ + F+ E P
Sbjct: 340 VGYWVYPNLQEAFFQMSVPYIFYLIICSSGEV*GNS*PSVPKDLMQMNNSLLFLETEVP 164
>gb|CO173249.1|CO173249 NDL1_35_A08.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_35_A08_A029 3', mRNA sequence
Length = 616
Score = 98.0 bits (212), Expect = 4e-020
Identities = 36/56 (64%), Positives = 48/56 (85%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDP 171
G F++DE+DLI+++HA+LGN+WS IA +LPGRTDNEIKN WNS +K+K+ GIDP
Sbjct: 62 GGFSEDEDDLIVKMHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKIINMGIDP 229
Score = 53.6 bits (113), Expect = 4e-007
Identities = 24/42 (57%), Positives = 27/42 (64%)
Frame = -2 / -2
Query: 170 GSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
GS+P + F EF F ISLSV PG AI DHLFPR+AC
Sbjct: 228 GSIPMLIIFLFRCEFQ*FFISLSVRPGKRPAIKDHLFPRSAC 103
Score = 36.1 bits (74), Expect = 0.094
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -1 / -1
Query: 195 LSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
L K G I+ + L RVP + L+I WQ RP + ++ V D+++ FV
Sbjct: 253 LLKRTAGQWIDPHVDNFSLQMRVPVVFYLVICSSWQTPSYQRPLISKECVHFDNKIVFV 77
>gb|CO173319.1|CO173319 NDL1_35_A08.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_35_A08_A029 5', mRNA sequence
Length = 617
Score = 98.0 bits (212), Expect = 4e-020
Identities = 36/56 (64%), Positives = 48/56 (85%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDP 171
G F++DE+DLI+++HA+LGN+WS IA +LPGRTDNEIKN WNS +K+K+ GIDP
Sbjct: 51 GGFSEDEDDLIVKMHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKIINMGIDP 218
Score = 53.6 bits (113), Expect = 4e-007
Identities = 24/42 (57%), Positives = 27/42 (64%)
Frame = -2 / -2
Query: 170 GSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
GS+P + F EF F ISLSV PG AI DHLFPR+AC
Sbjct: 217 GSIPMLIIFLFRCEFQ*FFISLSVRPGKRPAIKDHLFPRSAC 92
Score = 36.1 bits (74), Expect = 0.094
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -1 / -1
Query: 195 LSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
L K G I+ + L RVP + L+I WQ RP + ++ V D+++ FV
Sbjct: 242 LLKRTAGQWIDPHVDNFSLQMRVPVVFYLVICSSWQTPSYQRPLISKECVHFDNKIVFV 66
>gb|CO164542.1|CO164542 FLD1_48_E08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_48_E08_A029 5', mRNA sequence
Length = 862
Score = 97.5 bits (211), Expect = 5e-020
Identities = 38/61 (62%), Positives = 47/61 (77%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+ EE II LH +LGNRWS I++ LPGRTDNEIKN+WN+ +KK+L Q G+DP TH
Sbjct: 82 GNFSLKEEQTIIHLHQILGNRWSAISSHLPGRTDNEIKNVWNTHLKKRLLQIGVDPVTHA 261
Query: 184 P 186
P
Sbjct: 262 P 264
Score = 62.6 bits (133), Expect = 7e-010
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
G WV GS P C F FH F ISLSVLPG C I DH FPR C
Sbjct: 263 GAWVTGSTPICRRRFFK*VFHTFFISLSVLPGRCEEIADHRFPRI*C 123
Score = 31.2 bits (63), Expect = 3.1
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -1 / -2
Query: 180 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 4
VG + L + VP I LII ++ N P VP+D +Q+++ + F+ E P
Sbjct: 258 VGYWVYPNLQEAFFQMSVPYIFYLIICSSGEV*GNS*PSVPKDLMQMNNSLLFLETEVP 82
>gb|CF667045.1|CF667045 RTCNT1_27_G11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_27_G11_A029 5', mRNA sequence
Length = 744
Score = 97.1 bits (210), Expect = 7e-020
Identities = 40/74 (54%), Positives = 52/74 (70%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++ E++LII+ H+ LGN+WS IA LPGRTDNEIKN WN+ IKKKL + G+DP +H
Sbjct: 204 GNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGLDPKSHL 383
Query: 184 PLTEADHGGAAPTI 225
PL E T+
Sbjct: 384 PLGEPRDSNTTYTV 425
Score = 72.4 bits (155), Expect = 6e-013
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = -1 / -2
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G +G AV +KW + +GI + Q LD RVP +L L++ PP Q CN RP VPE
Sbjct: 431 GQNGVGSVAVTGFAKWEMRLGIESHSHQFFLDVRVPVVLYLVVRPPGQNPCNKRPFVPEA 252
Query: 51 SVQLDDEVFFVLGE 10
V+ DDE+ F+ E
Sbjct: 251 GVEFDDELVFLFRE 210
Score = 54.9 bits (116), Expect = 2e-007
Identities = 28/47 (59%), Positives = 29/47 (61%)
Frame = -2 / -3
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
S SG LGS P +FFLM F F ISLSV PG AI DHLFPR
Sbjct: 394 SPSGR*DLGSSPILTNFFLMCVFQWFFISLSVRPGKIRAIRDHLFPR 254
Score = 33.0 bits (67), Expect = 0.87
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2 / +1
Query: 89 CQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAP 232
C GG R R GTR SR++ IP+ SHL +TA P P
Sbjct: 289 CPGGRTTR*RTTGTRTSRKNW*EWDSIPSLISHLANPVTATLPTPFWP 432
>gb|DR014691.1|DR014691 HEAT1_51_B07.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_B07_A029 3', mRNA sequence
Length = 906
Score = 97.1 bits (210), Expect = 7e-020
Identities = 40/74 (54%), Positives = 52/74 (70%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++ E++LII+ H+ LGN+WS IA LPGRTDNEIKN WN+ IKKKL + G+DP +H
Sbjct: 187 GNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGLDPKSHL 366
Query: 184 PLTEADHGGAAPTI 225
PL E T+
Sbjct: 367 PLGEPRDSNTTYTV 408
Score = 72.9 bits (156), Expect = 5e-013
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = -1 / -1
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G +G AV +KW + +GI + Q LD RVP +L L++ PP Q CN RP VPE
Sbjct: 414 GQNGVGSVAVTGFAKWEMRLGIESHSHQFFLDVRVPVVLYLVVRPPGQNPCNKRPFVPEA 235
Query: 51 SVQLDDEVFFVLGE 10
V+ DDE+ F+ E
Sbjct: 234 GVEFDDELIFLFRE 193
Score = 54.9 bits (116), Expect = 2e-007
Identities = 28/47 (59%), Positives = 29/47 (61%)
Frame = -2 / -2
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
S SG LGS P +FFLM F F ISLSV PG AI DHLFPR
Sbjct: 377 SPSGR*DLGSSPILTNFFLMCVFQWFFISLSVRPGKIRAIRDHLFPR 237
Score = 33.0 bits (67), Expect = 0.87
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2 / +2
Query: 89 CQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAP 232
C GG R R GTR SR++ IP+ SHL +TA P P
Sbjct: 272 CPGGRTTR*RTTGTRTSRKNW*EWDSIPSLISHLANPVTATLPTPFWP 415
>gb|DR014768.1|DR014768 HEAT1_51_B07.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_B07_A029 5', mRNA sequence
Length = 928
Score = 97.1 bits (210), Expect = 7e-020
Identities = 40/74 (54%), Positives = 52/74 (70%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++ E++LII+ H+ LGN+WS IA LPGRTDNEIKN WN+ IKKKL + G+DP +H
Sbjct: 238 GNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGLDPKSHL 417
Query: 184 PLTEADHGGAAPTI 225
PL E T+
Sbjct: 418 PLGEPRDSNTTYTV 459
Score = 72.9 bits (156), Expect = 5e-013
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = -1 / -2
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G +G AV +KW + +GI + Q LD RVP +L L++ PP Q CN RP VPE
Sbjct: 465 GQNGVGSVAVTGFAKWEMRLGIESHSHQFFLDVRVPVVLYLVVRPPGQNPCNKRPFVPEA 286
Query: 51 SVQLDDEVFFVLGE 10
V+ DDE+ F+ E
Sbjct: 285 GVEFDDELIFLFRE 244
Score = 54.9 bits (116), Expect = 2e-007
Identities = 28/47 (59%), Positives = 29/47 (61%)
Frame = -2 / -3
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
S SG LGS P +FFLM F F ISLSV PG AI DHLFPR
Sbjct: 428 SPSGR*DLGSSPILTNFFLMCVFQWFFISLSVRPGKIRAIRDHLFPR 288
Score = 33.0 bits (67), Expect = 0.87
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2 / +2
Query: 89 CQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAP 232
C GG R R GTR SR++ IP+ SHL +TA P P
Sbjct: 323 CPGGRTTR*RTTGTRTSRKNW*EWDSIPSLISHLANPVTATLPTPFWP 466
>gb|DR017577.1|DR017577 STRS1_17_E03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_17_E03_A034 3', mRNA sequence
Length = 738
Score = 97.1 bits (210), Expect = 7e-020
Identities = 40/74 (54%), Positives = 52/74 (70%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++ E++LII+ H+ LGN+WS IA LPGRTDNEIKN WN+ IKKKL + G+DP +H
Sbjct: 18 GNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGLDPKSHL 197
Query: 184 PLTEADHGGAAPTI 225
PL E T+
Sbjct: 198 PLGEPRDSNTTYTV 239
Score = 69.7 bits (149), Expect = 4e-012
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = -1 / -2
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G +G AV +KW + +GI + Q LD VP +L L++ PP Q CN RP VPE
Sbjct: 245 GQNGVGSVAVTGFAKWEMRLGIESHSHQFFLDVSVPVVLYLVVRPPGQNPCNKRPFVPEA 66
Query: 51 SVQLDDEVFFVLGE 10
V+ DDE+ F+ E
Sbjct: 65 GVEFDDELVFLFRE 24
Score = 54.5 bits (115), Expect = 2e-007
Identities = 28/47 (59%), Positives = 29/47 (61%)
Frame = -2 / -3
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
S SG LGS P +FFLM F F ISLSV PG AI DHLFPR
Sbjct: 208 SPSGR*DLGSSPILTNFFLM*VFQWFFISLSVRPGKIRAIRDHLFPR 68
Score = 29.8 bits (60), Expect = 8.1
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2 / +1
Query: 89 CQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAP 232
C GG R R GT SR++ IP+ SHL +TA P P
Sbjct: 103 CPGGRTTR*RTTGTLTSRKNW*EWDSIPSLISHLANPVTATLPTPFWP 246
>gb|DR017658.1|DR017658 STRS1_17_E03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_17_E03_A034 5', mRNA sequence
Length = 724
Score = 97.1 bits (210), Expect = 7e-020
Identities = 40/74 (54%), Positives = 52/74 (70%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++ E++LII+ H+ LGN+WS IA LPGRTDNEIKN WN+ IKKKL + G+DP +H
Sbjct: 187 GNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGLDPKSHL 366
Query: 184 PLTEADHGGAAPTI 225
PL E T+
Sbjct: 367 PLGEPRDSNTTYTV 408
Score = 69.7 bits (149), Expect = 4e-012
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = -1 / -2
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G +G AV +KW + +GI + Q LD VP +L L++ PP Q CN RP VPE
Sbjct: 414 GQNGVGSVAVTGFAKWEMRLGIESHSHQFFLDVSVPVVLYLVVRPPGQNPCNKRPFVPEA 235
Query: 51 SVQLDDEVFFVLGE 10
V+ DDE+ F+ E
Sbjct: 234 GVEFDDELVFLFRE 193
Score = 54.5 bits (115), Expect = 2e-007
Identities = 28/47 (59%), Positives = 29/47 (61%)
Frame = -2 / -3
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
S SG LGS P +FFLM F F ISLSV PG AI DHLFPR
Sbjct: 377 SPSGR*DLGSSPILTNFFLM*VFQWFFISLSVRPGKIRAIRDHLFPR 237
Score = 29.8 bits (60), Expect = 8.1
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2 / +2
Query: 89 CQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAP 232
C GG R R GT SR++ IP+ SHL +TA P P
Sbjct: 272 CPGGRTTR*RTTGTLTSRKNW*EWDSIPSLISHLANPVTATLPTPFWP 415
>gb|CX647457.1|CX647457 COLD1_16_B04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_16_B04_A029 5', mRNA sequence
Length = 748
Score = 94.8 bits (205), Expect = 3e-019
Identities = 38/60 (63%), Positives = 46/60 (76%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+ EE II+LHA+LGNRWS IA LP RTDNEIKN WN+ ++K+L + GIDP THK
Sbjct: 160 GKFSLQEEQTIIQLHALLGNRWSTIATHLPKRTDNEIKNYWNTHLRKRLLKMGIDPVTHK 339
Score = 51.4 bits (108), Expect = 2e-006
Identities = 25/46 (54%), Positives = 28/46 (60%)
Frame = -2 / -3
Query: 182 LWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
LWV GS+P FL F F ISLSVL G A+ DHLFP+ AC
Sbjct: 338 LWVTGSIPIFSKRFLRCVFQ*FFISLSVLFGR*VAMVDHLFPKRAC 201
Score = 49.1 bits (103), Expect = 9e-006
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = -1 / -2
Query: 183 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 10
LVG GI++ Q L RVP IL L++ W++ + PPV ++SVQLD+ + F+ E
Sbjct: 339 LVGHGIDSHFQQALP*MRVPVILYLVVCSLWEMSSDGGPPVSQESVQLDNGLLFLQTE 166
>gb|CF391376.1|CF391376 RTDR3_1_G04.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_1_G04_A022 5', mRNA
sequence
Length = 480
Score = 93.9 bits (203), Expect = 6e-019
Identities = 39/60 (65%), Positives = 44/60 (73%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F EE II+LHA+LGNRWS I QLP RTDNEIKN WN+ +KK+L Q GIDP T K
Sbjct: 300 GKFNPQEEQTIIQLHALLGNRWSTITTQLPKRTDNEIKNYWNTHLKKRLVQMGIDPMTQK 479
Score = 47.3 bits (99), Expect = 3e-005
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = -2 / -3
Query: 176 VLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTA 48
V+GS+P C F F FLISLSV GS + DHLFPR A
Sbjct: 472 VMGSIPICTKRFFRWVFQ*FLISLSVRLGS*VVMVDHLFPRRA 344
Score = 38.4 bits (79), Expect = 0.019
Identities = 17/57 (29%), Positives = 34/57 (59%)
Frame = -1 / -2
Query: 171 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPP 1
G+++ L Q L +P +LDL++S +L + PP+ + ++L++ +FF+ E P
Sbjct: 467 GVDSHLHQALFQMGIPVVLDLVVSSLRKLSGDGGPPISQKGMKLNNCLFFLWVELSP 297
>gb|BQ701670.1|BQ701670 NXSI_118_C02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_118_C02 5' similar to Arabidopsis thaliana
sequence At4g38620 putative transcription factor (MYB4)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 549
Score = 93.5 bits (202), Expect = 8e-019
Identities = 39/74 (52%), Positives = 51/74 (68%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++ E++LII+ H+ LGN+WS IA LPGRTDNEIKN WN+ IKKKL + G+D +H
Sbjct: 227 GNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGLDSKSHL 406
Query: 184 PLTEADHGGAAPTI 225
PL E T+
Sbjct: 407 PLGEPRDSNTTYTV 448
Score = 72.9 bits (156), Expect = 5e-013
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = -1 / -3
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G +G AV +KW + +GI + Q LD RVP +L L++ PP Q CN RP VPE
Sbjct: 454 GQNGVGSVAVTGFTKWEMRLGIESHSHQFFLDVRVPVVLYLVVRPPGQNPCNKRPFVPET 275
Query: 51 SVQLDDEVFFVLGE 10
V+ DDE+ F+ E
Sbjct: 274 GVEFDDELVFLFRE 233
Score = 51.4 bits (108), Expect = 2e-006
Identities = 27/47 (57%), Positives = 28/47 (59%)
Frame = -2 / -1
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
S SG L S P +FFLM F F ISLSV PG AI DHLFPR
Sbjct: 417 SPSGR*DLESSPILTNFFLMCVFQWFFISLSVRPGKIRAIRDHLFPR 277
Score = 33.9 bits (69), Expect = 0.46
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +2 / +3
Query: 89 CQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAP 232
C GG R R GTR SR++ IP+ SHL+ +TA P P
Sbjct: 312 CPGGRTTR*RTTGTRTSRKNW*EWDSIPSLISHLVNPVTATLPTPFWP 455
>gb|CO361758.1|CO361758 NDL2_6_H01.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_6_H01_A029 5', mRNA sequence
Length = 782
Score = 76.0 bits (163), Expect(2) = 9e-019
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +1 / +1
Query: 64 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 189
RWS IA +L GRTDNEIKN WNS IKKKL KG+DP TH PL
Sbjct: 358 RWSLIAGRLAGRTDNEIKNYWNSHIKKKLLSKGLDPKTHCPL 483
Score = 50.5 bits (106), Expect(2) = 6e-007
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = -1 / -3
Query: 204 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 64
V+ L++ VG+G+ + Q LLD VP +L L++S P Q CN RPP
Sbjct: 498 VVGLAEGTVGLGVESLA*QFLLDVTVPVVLYLVVSSPCQSPCNKRPP 358
Score = 50.0 bits (105), Expect = 5e-006
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 63
G WVLGS P +FFLM F F ISLSV P + AI DHL
Sbjct: 479 GQWVLGSSPLLSNFFLM*LFQ*FFISLSVRPANLPAIRDHL 357
Score = 37.9 bits (78), Expect(2) = 9e-019
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRW 69
G F ++E++LII+LHAVLGN++
Sbjct: 16 GGFTEEEDELIIKLHAVLGNKY 81
Score = 21.8 bits (42), Expect(2) = 6e-007
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -1
Query: 68 HLFPRTAC 45
+LFPRTAC
Sbjct: 80 YLFPRTAC 57
>gb|CO162972.1|CO162972 FLD1_38_D09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_38_D09_A029 5', mRNA sequence
Length = 842
Score = 92.1 bits (199), Expect = 2e-018
Identities = 43/86 (50%), Positives = 54/86 (62%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+ E+ +II LHA+LGNRWS IA+ LPGRTDNEIKN WN+ +K++L GIDP TH
Sbjct: 217 GNFSIHEDIVIIHLHAILGNRWSAIASHLPGRTDNEIKNHWNTRLKRQLPVMGIDPVTHS 396
Query: 184 PLTEADHGGAAPTISTERTSGSSDIN 261
L A + ST S + N
Sbjct: 397 LLPVAPTDSFMASSSTVIISRDAGCN 474
Score = 50.9 bits (107), Expect = 3e-006
Identities = 27/50 (54%), Positives = 30/50 (60%)
Frame = -2 / -1
Query: 197 ASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTA 48
A+ S L V GS+P + F F ISLSVLPG C AI DHLFPR A
Sbjct: 410 ATGSKL*VTGSIPITGNCLFSLVFQ*FFISLSVLPGRCDAIADHLFPRIA 261
>gb|CO163969.1|CO163969 FLD1_45_A11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_45_A11_A029 3', mRNA sequence
Length = 888
Score = 92.1 bits (199), Expect = 2e-018
Identities = 35/68 (51%), Positives = 53/68 (77%)
Frame = +1 / -3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E+DLII+LH +LG++WS IA +LPGRT+NEIKN W++ IKK+ + +DP +H+
Sbjct: 652 GNFSEEEDDLIIKLHNLLGDKWSLIAGRLPGRTENEIKNYWDTHIKKRKLSRELDPQSHR 473
Query: 184 PLTEADHG 207
L D+G
Sbjct: 472 SLWLPDNG 449
Score = 36.6 bits (75), Expect = 0.069
Identities = 22/51 (43%), Positives = 24/51 (47%)
Frame = -2 / +3
Query: 206 P*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
P S S W GS FLM F IS SV PG+ AI DHL P+
Sbjct: 450 PLSGSHRERWDWGSSSLLNFLFLMWVSQ*FFISFSVRPGNRPAIRDHLSPK 602
Score = 33.9 bits (69), Expect = 0.46
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = -1 / +2
Query: 180 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 10
+G+G+ L+ +P +L L+ PP Q + RP + ++ V+ D E+ F E
Sbjct: 476 MGLGVEFPAQFSFLNVGIPIVLYLVFRPPRQSTRDKRPLIAQEVVEFDYEIVFFFRE 646
>gb|DR167893.1|DR167893 RTPHOS1_21_G02.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_21_G02_A029 5', mRNA sequence
Length = 635
Score = 92.1 bits (199), Expect = 2e-018
Identities = 43/86 (50%), Positives = 54/86 (62%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+ E+ +II LHA+LGNRWS IA+ LPGRTDNEIKN WN+ +K++L GIDP TH
Sbjct: 62 GNFSIHEDIVIIHLHAILGNRWSAIASHLPGRTDNEIKNHWNTRLKRQLPVMGIDPVTHS 241
Query: 184 PLTEADHGGAAPTISTERTSGSSDIN 261
L A + ST S + N
Sbjct: 242 LLPVAPTDSFMASSSTVIISRDAGCN 319
Score = 50.9 bits (107), Expect = 3e-006
Identities = 27/50 (54%), Positives = 30/50 (60%)
Frame = -2 / -3
Query: 197 ASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTA 48
A+ S L V GS+P + F F ISLSVLPG C AI DHLFPR A
Sbjct: 255 ATGSKL*VTGSIPITGNCLFSLVFQ*FFISLSVLPGRCDAIADHLFPRIA 106
>gb|DR746217.1|DR746217 RTCU1_35_B06.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_35_B06_A029 5', mRNA sequence
Length = 458
Score = 91.7 bits (198), Expect = 3e-018
Identities = 34/68 (50%), Positives = 53/68 (77%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E+DLII+LH +LG++WS IA +LPGRT+NEIKN W++ +KK+ + +DP +H+
Sbjct: 68 GNFSEEEDDLIIKLHNLLGDKWSLIAGRLPGRTENEIKNYWDTHVKKRKLSRELDPQSHR 247
Query: 184 PLTEADHG 207
L D+G
Sbjct: 248 SLWLPDNG 271
Score = 33.0 bits (67), Expect = 0.87
Identities = 21/50 (42%), Positives = 22/50 (44%)
Frame = -2 / -3
Query: 206 P*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
P S S W GS FL F IS SV PG+ AI DHL P
Sbjct: 270 PLSGSHRERWDWGSSSLLNFLFLTWVSQ*FFISFSVRPGNRPAIRDHLSP 121
>gb|DR055413.1|DR055413 RTCA1_23_C03.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_23_C03_A029 5', mRNA sequence
Length = 535
Score = 90.8 bits (196), Expect = 5e-018
Identities = 35/62 (56%), Positives = 46/62 (74%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G + +EE+L+I LH +LGNRWS IA +LPGRTDNEIKN WN+ ++KK+ + P T K
Sbjct: 274 GNISPEEEELLIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTHLRKKIETGELKPKTQK 453
Query: 184 PL 189
PL
Sbjct: 454 PL 459
Score = 39.3 bits (81), Expect = 0.010
Identities = 20/34 (58%), Positives = 20/34 (58%)
Frame = -2 / -3
Query: 146 FFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
FFL F F ISLSVLPGS AI D PR C
Sbjct: 416 FFLK*VFQ*FFISLSVLPGSRPAINDQRLPRRRC 315
>gb|CF403056.1|CF403056 RTWW1_24_G08.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_24_G08_A015 5', mRNA sequence
Length = 726
Score = 89.9 bits (194), Expect = 1e-017
Identities = 34/68 (50%), Positives = 52/68 (76%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+ +E+DLII+LH +LG++WS IA +LPGRT+NEIKN W++ +KK+ + +DP +H+
Sbjct: 11 GNFSVEEDDLIIKLHNLLGDKWSLIAGRLPGRTENEIKNYWDTHVKKRKLSRELDPQSHR 190
Query: 184 PLTEADHG 207
L D+G
Sbjct: 191 SLWLPDNG 214
Score = 33.9 bits (69), Expect = 0.46
Identities = 21/51 (41%), Positives = 23/51 (45%)
Frame = -2 / -1
Query: 206 P*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
P S S W GS FL F IS SV PG+ AI DHL P+
Sbjct: 213 PLSGSHRERWDWGSSSLLNFLFLTWVSQ*FFISFSVRPGNRPAIRDHLSPK 61
>gb|CV034623.1|CV034623 RTNACL1_10_A11.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_10_A11_A029 5', mRNA sequence
Length = 746
Score = 89.4 bits (193), Expect = 1e-017
Identities = 33/62 (53%), Positives = 50/62 (80%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII LH++LGN+WS IA +LPGR+ NEIKN W+ +K+KL ++G+ P TH+
Sbjct: 373 GNFSEEEDELIIRLHSLLGNKWSLIAGRLPGRSGNEIKNHWSIHMKRKLSRRGLHPQTHR 552
Query: 184 PL 189
L
Sbjct: 553 SL 558
Score = 87.2 bits (188), Expect = 6e-017
Identities = 33/55 (60%), Positives = 46/55 (83%)
Frame = +1 / +1
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPN 174
F+++E++LII LH++LGN+WS IA +L GRTDNEIKN W++ IK+KL KG DP+
Sbjct: 199 FSEEEDELIIRLHSLLGNKWSLIAGRLTGRTDNEIKNHWSTHIKRKLSSKGFDPH 363
Score = 44.2 bits (92), Expect = 3e-004
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = -2 / -1
Query: 170 GSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
GS P +F LM F ISLSVLP + AI DHLFPR+
Sbjct: 359 GSNPLLDNFLLMCVLQWFFISLSVLPVNLPAIRDHLFPRS 240
Score = 36.1 bits (74), Expect = 0.094
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 176 VLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
V G P +F M F ISL PG+ AI DHLFPR+
Sbjct: 545 VCGWSPLRDNFLFMCMLQWFFISLPDRPGNLPAIRDHLFPRS 420
>gb|DR177927.1|DR177927 RTMNUT1_8_E11.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_8_E11_A029 3', mRNA sequence
Length = 794
Score = 89.0 bits (192), Expect = 2e-017
Identities = 37/68 (54%), Positives = 47/68 (69%)
Frame = +1 / +2
Query: 22 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEAD 201
E++LII+ H+ GN+WS IA LPGRTDNEIKN WN+ IKKKL + G+DP +H PL E
Sbjct: 5 EDELIIKFHSRXGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGLDPKSHLPLGEPR 184
Query: 202 HGGAAPTI 225
T+
Sbjct: 185 DSNTTYTV 208
Score = 68.4 bits (146), Expect = 1e-011
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = -1 / -2
Query: 231 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
G +G AV +KW + +GI + Q LD RVP +L L++ PP Q CN RP VP
Sbjct: 214 GQNGVGSVAVTGFAKWEMRLGIESHSHQFFLDVRVPVVLYLVVRPPGQNPCNKRPFVPXA 35
Query: 51 SVQLDDEVFFV 19
V+ DDE+ F+
Sbjct: 34 GVEFDDELVFL 2
Score = 52.7 bits (111), Expect = 7e-007
Identities = 27/46 (58%), Positives = 28/46 (60%)
Frame = -2 / -3
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
S SG LGS P +FFLM F F ISLSV PG AI DHLFP
Sbjct: 177 SPSGR*DLGSSPILTNFFLMCVFQWFFISLSVRPGKIRAIRDHLFP 40
Score = 33.0 bits (67), Expect = 0.87
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2 / +3
Query: 89 CQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAP 232
C GG R R GTR SR++ IP+ SHL +TA P P
Sbjct: 72 CPGGRTTR*RTTGTRTSRKNW*EWDSIPSLISHLANPVTATLPTPFWP 215
>gb|CF395399.1|CF395399 RTDS2_11_H08.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_11_H08_A021 5', mRNA sequence
Length = 741
Score = 88.1 bits (190), Expect = 3e-017
Identities = 33/62 (53%), Positives = 48/62 (77%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E++LII LH++LGN+WS IA +LPGRT NEIKN W+ +K+K +G+ P TH+
Sbjct: 119 GNFSEEEDELIIRLHSLLGNKWSLIAGRLPGRTGNEIKNHWSIHMKRKWSSRGLHPQTHR 298
Query: 184 PL 189
L
Sbjct: 299 SL 304
Score = 56.7 bits (120), Expect = 1e-007
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1 / +2
Query: 67 WSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGID 168
WS IA +LPGRTDNEIKN W++ IK+KL KG D
Sbjct: 2 WSLIAGRLPGRTDNEIKNHWSTHIKRKLLIKGFD 103
Score = 39.3 bits (81), Expect = 0.010
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 176 VLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
V G P F M F ISL V PG+ AI DHLFPR+
Sbjct: 291 VCGWSPLLDHFLFMCMLQWFFISLPVRPGNLPAIRDHLFPRS 166
Score = 35.7 bits (73), Expect = 0.13
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -2 / -1
Query: 167 SMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DH 66
S P +F LM F ISLSVLPG+ AI DH
Sbjct: 102 SNPLINNFLLMCVLQWFFISLSVLPGNLPAIRDH 1
>gb|CF397637.1|CF397637 RTDS3_4_A07.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_4_A07_A022 5', mRNA sequence
Length = 714
Score = 87.7 bits (189), Expect = 5e-017
Identities = 36/66 (54%), Positives = 46/66 (69%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+ E+ II LH +LGN+WS IA+ LPGRTD+EIKN WN+ + K+L GIDP TH+
Sbjct: 217 GTFSVHEDLNIIRLHGILGNKWSAIASHLPGRTDSEIKNHWNTKLSKRLLLMGIDPVTHR 396
Query: 184 PLTEAD 201
L D
Sbjct: 397 SLPTPD 414
Score = 59.0 bits (125), Expect = 9e-009
Identities = 28/45 (62%), Positives = 29/45 (64%)
Frame = -2 / -2
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
S LWV GS+P S L F F ISLSVLPG C AI DHLFPR
Sbjct: 401 SDLWVTGSIPIKRSRLLSLVFQ*FFISLSVLPGRCEAIADHLFPR 267
>gb|DR167401.1|DR167401 RTPHOS1_18_C09.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_18_C09_A029 5', mRNA sequence
Length = 850
Score = 86.3 bits (186), Expect = 1e-016
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
G + DEEDLII +H +LGNRWS IA +LPGRTDNEIKN WN+ + KKLR
Sbjct: 237 GRISADEEDLIIRMHRLLGNRWSLIAGRLPGRTDNEIKNYWNTQLSKKLR 386
Score = 43.7 bits (91), Expect = 4e-004
Identities = 22/35 (62%), Positives = 22/35 (62%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
SF L F FLISLSVLPGS AI DH PR C
Sbjct: 382 SFLLS*VFQ*FLISLSVLPGSRPAIRDHRLPRRRC 278
>gb|CF667292.1|CF667292 RTCNT1_29_G02.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_29_G02_A029 3', mRNA sequence
Length = 681
Score = 85.4 bits (184), Expect = 2e-016
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +1 / -2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
G + DEE+LII +H +LGNRWS IA +LPGRTDNEIKN WN+ ++KKLR
Sbjct: 446 GNISHDEEELIIRMHRLLGNRWSLIAGRLPGRTDNEIKNYWNTHLRKKLR 297
Score = 43.3 bits (90), Expect = 6e-004
Identities = 23/49 (46%), Positives = 23/49 (46%)
Frame = -2 / +1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 3
SF F FLISLSV PGS AI DH PR C SW P
Sbjct: 301 SFLRRWVFQ*FLISLSVRPGSRPAISDHRLPRRRCIRIISSSSSWEMFP 447
Score = 41.0 bits (85), Expect = 0.003
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1 / +3
Query: 153 PQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 13
PQLL VP +LD I+ Q C RPP+ E +V +++ F++G
Sbjct: 297 PQLLA*MGVPVVLDFIVCSTRQSACYQRPPIAEKTVHPNNKFLFIVG 437
>gb|DR015810.1|DR015810 STRS1_5_F07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_F07_A034 5', mRNA sequence
Length = 829
Score = 85.4 bits (184), Expect = 2e-016
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F++DE+++I L+A +G+RWS IAAQLPGRTDN+IKN WN+ +KKKL K D T +
Sbjct: 207 GGFSEDEDNIICSLYASIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKRKDQQTRR 386
Score = 42.4 bits (88), Expect = 0.001
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = -2 / -1
Query: 167 SMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTA 48
S+ F +FF F F +SLSVLPG+ AAI DHL P A
Sbjct: 370 SLRFPSNFFFSLVFQ*FFMSLSVLPGNWAAIIDHLLPMLA 251
Score = 33.9 bits (69), Expect = 0.46
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -1 / -3
Query: 168 INAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 10
I F QL L VP I +I+ L CN RPP ++ ++V F+ E
Sbjct: 371 IFTFPKQLFLQPCVPVIFYVIVCSSR*LGCNYRPPASNACIEATNDVIFIF*E 213
>gb|CF671993.1|CF671993 RTCNT1_60_D02.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_60_D02_A029 5', mRNA sequence
Length = 557
Score = 85.0 bits (183), Expect = 3e-016
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGID 168
G F+ +EED II+LH ++GNRWS IA+ LPGRTDNEIKN+WN+ +KK+L + D
Sbjct: 221 GNFSPEEEDQIIKLHELIGNRWSTIASYLPGRTDNEIKNVWNTHLKKRLARMKAD 385
Score = 49.1 bits (103), Expect = 9e-006
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = -2 / -3
Query: 143 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
F FH FLISLSVLPG AI DHLFP ++C
Sbjct: 360 FFKWVFHTFLISLSVLPGKYEAIVDHLFPMSSC 262
Score = 39.7 bits (82), Expect = 0.007
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1 / -2
Query: 129 VP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 4
VP +LDLI+ WQ+R N P +P + +Q ++ +F + P
Sbjct: 346 VPHVLDLIVGSSWQVRSNSGPSIPYELMQFNNLIFLFWTKIP 221
>gb|CO158547.1|CO158547 FLD1_7_D03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_7_D03_A029 5', mRNA sequence
Length = 693
Score = 84.1 bits (181), Expect = 6e-016
Identities = 32/49 (65%), Positives = 42/49 (85%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G F+ +EED II+LH ++GNRWS IA+ LPGRTDNEIKN+WN+ +KK+L
Sbjct: 243 GNFSPEEEDQIIKLHELIGNRWSTIASYLPGRTDNEIKNVWNTHLKKRL 389
Score = 49.1 bits (103), Expect = 9e-006
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = -2 / -3
Query: 143 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
F FH FLISLSVLPG AI DHLFP ++C
Sbjct: 382 FFKWVFHTFLISLSVLPGKYEAIVDHLFPMSSC 284
Score = 39.7 bits (82), Expect = 0.007
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1 / -2
Query: 129 VP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 4
VP +LDLI+ WQ+R N P +P + +Q ++ +F + P
Sbjct: 368 VPHVLDLIVGSSWQVRSNSGPSIPYELMQFNNLIFLFWTKIP 243
>gb|CO164694.1|CO164694 FLD1_49_E04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_49_E04_A029 5', mRNA sequence
Length = 916
Score = 84.1 bits (181), Expect = 6e-016
Identities = 31/50 (62%), Positives = 41/50 (82%)
Frame = +1 / +1
Query: 55 LGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADH 204
+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KG+DP TH+PL + ++
Sbjct: 7 VGNKWSLIAVRLPGRTDNEIKNYWNTHIKRKLLSKGLDPQTHRPLGQPNN 156
Score = 53.6 bits (113), Expect = 4e-007
Identities = 25/44 (56%), Positives = 27/44 (61%)
Frame = -2 / -3
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
SG WV GS P +F LM F F ISLSV PG+ AI DHL P
Sbjct: 140 SGRWVWGSSPLLSNFLLMCVFQ*FFISLSVRPGNLTAIKDHLLP 9
Score = 44.2 bits (92), Expect = 3e-004
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = -1 / -2
Query: 204 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 52
++ L++W +G+G+ + Q D VP +L L++ P Q CN RP + +
Sbjct: 156 IVWLAEWTMGLGVESLAQQFSFDVCVPVVLYLVVRPSGQSHCN*RPLIANE 4
>gb|DR051127.1|DR051127 RTBOR1_27_G08.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_27_G08_A029 5', mRNA sequence
Length = 772
Score = 84.1 bits (181), Expect = 6e-016
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + DEEDLII +H +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 239 GRISADEEDLIIRMHRLLGNRWSLIAGRLPGRTDNEIKNYWNTQLSKKL 385
Score = 43.7 bits (91), Expect = 4e-004
Identities = 22/35 (62%), Positives = 22/35 (62%)
Frame = -2 / -2
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
SF L F FLISLSVLPGS AI DH PR C
Sbjct: 384 SFLLS*VFQ*FLISLSVLPGSRPAIRDHRLPRRRC 280
>gb|DR683147.1|DR683147 EST1073223 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAE70 3' end, mRNA sequence
Length = 768
Score = 84.1 bits (181), Expect = 6e-016
Identities = 32/50 (64%), Positives = 42/50 (84%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
GAF +EE +I+ELHA LGN+W+++AA LPGRTDNEIKN WN+ IK++ R
Sbjct: 411 GAFTAEEERIILELHAKLGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQR 560
Score = 33.9 bits (69), Expect = 0.46
Identities = 21/50 (42%), Positives = 22/50 (44%)
Frame = -2 / -3
Query: 152 LSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 3
L L+ F F ISLSV PG AAI HL P A S AP
Sbjct: 559 LCLLLIRVFQ*FFISLSVRPGR*AAIRAHLLPSLAWSSRIMRSSSAVKAP 410
>gb|DT631233.1|DT631233 EST1146164 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF647 3' end, mRNA sequence
Length = 762
Score = 84.1 bits (181), Expect = 6e-016
Identities = 32/50 (64%), Positives = 42/50 (84%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
GAF +EE +I+ELHA LGN+W+++AA LPGRTDNEIKN WN+ IK++ R
Sbjct: 349 GAFTAEEERIILELHAKLGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQR 498
Score = 33.9 bits (69), Expect = 0.46
Identities = 21/50 (42%), Positives = 22/50 (44%)
Frame = -2 / -2
Query: 152 LSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 3
L L+ F F ISLSV PG AAI HL P A S AP
Sbjct: 497 LCLLLIRVFQ*FFISLSVRPGR*AAIRAHLLPSLAWSSRIMRSSSAVKAP 348
>gb|CN852309.1|CN852309 Pi148-1 Salicylate-treated slash pine seedlings Pinus elliottii
cDNA, mRNA sequence
Length = 270
Score = 83.6 bits (180), Expect = 8e-016
Identities = 31/48 (64%), Positives = 42/48 (87%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
G+F ++E++LII+LH+ +GN+WS IA +LPGRTDNEIKN WN+ IKKK
Sbjct: 127 GSFTEEEDELIIKLHSFVGNKWSLIAGRLPGRTDNEIKNYWNTHIKKK 270
Score = 40.6 bits (84), Expect = 0.004
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1 / -1
Query: 138 DARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 10
D VP +L L++ P Q CN RP V + V+ DDE+ F E
Sbjct: 261 DVCVPVVLYLVVRPSGQSPCN*RPLVANEGVEFDDELVFFFRE 133
Score = 40.1 bits (83), Expect = 0.005
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -2 / -2
Query: 146 FFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
FFLM F F ISLSV PG+ AI DHL P
Sbjct: 269 FFLMCVFQ*FFISLSVRPGNLPAIKDHLLP 180
>gb|CX646566.1|CX646566 COLD1_10_D06.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_10_D06_A029 3', mRNA sequence
Length = 802
Score = 83.6 bits (180), Expect = 8e-016
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +1 / +1
Query: 55 LGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADH 204
LGN+WS IA +LPGRTDNEIKN WNS +K+KL GIDP TH+P + H
Sbjct: 1 LGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGIDPLTHRPFQKTSH 150
Score = 54.0 bits (114), Expect = 3e-007
Identities = 25/43 (58%), Positives = 27/43 (62%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
G WV GS+P +SF EF F ISLSV PG AI DHLFP
Sbjct: 131 GRWVRGSIPMLISFRFRCEFQ*FFISLSVRPGKRPAIKDHLFP 3
Score = 33.9 bits (69), Expect = 0.46
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -1 / -2
Query: 237 SLGADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRP 67
SL GG V SL K +G G+ + + L RVP +L L+I WQ RP
Sbjct: 183 SLTFCGGEG*XVRSLLKRTMG*GVYSHADKFSLQMRVPVVLYLVICSSWQTASYQRP 13
>gb|DR015700.1|DR015700 STRS1_5_D02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_D02_A034 3', mRNA sequence
Length = 909
Score = 83.2 bits (179), Expect = 1e-015
Identities = 29/64 (45%), Positives = 46/64 (71%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G + +E++L++ LH +LGNRW+ IA +LPGRTDNE+KN WN+ + K++++ +P K
Sbjct: 235 GNISPEEDELLVRLHRLLGNRWTLIAGRLPGRTDNEVKNYWNTQLSKRVQRGEFEPKFQK 414
Query: 184 PLTE 195
P E
Sbjct: 415 PFKE 426
Score = 36.1 bits (74), Expect = 0.094
Identities = 22/50 (44%), Positives = 24/50 (48%)
Frame = -2 / -2
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
S+ G LGS + L F F SLSV PGS AI HL PR C
Sbjct: 425 SLKGF*NLGSNSPLWTLLLSWVFQ*FFTSLSVRPGSRPAINVHLLPRRRC 276
>gb|CO176256.1|CO176256 NDL1_60_G12.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_60_G12_A029 5', mRNA sequence
Length = 769
Score = 82.7 bits (178), Expect = 1e-015
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + DEE+LII LH +LGNRWS IA +LPGRTDNEIKN WNS + KKL
Sbjct: 246 GDISPDEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKL 392
Score = 41.5 bits (86), Expect = 0.002
Identities = 21/35 (60%), Positives = 21/35 (60%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
SF EF FLISLSV PGS AI DH PR C
Sbjct: 391 SFLQR*EFQ*FLISLSVRPGSRPAISDHRLPRRRC 287
Score = 37.0 bits (76), Expect = 0.050
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -1 / -3
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 13
QLL RVP +LD ++ + N RPP+ + ++Q ++E+ + G
Sbjct: 392 QLLAKVRVPVVLDFVVRSSRESSSNQRPPIAKKAMQPNNELLLIGG 255
>gb|DR120088.1|DR120088 RTMG1_27_A10.g2_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_27_A10_A029 5', mRNA sequence
Length = 713
Score = 82.7 bits (178), Expect = 1e-015
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = +1 / +2
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
F+ DEE+LI+ LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 206 FSSDEEELILRLHRLLGNRWSLIAGRLPGRTDNEIKNHWNTYLSKKL 346
Score = 41.9 bits (87), Expect = 0.002
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = -2 / -3
Query: 158 FCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
F +F L F FLISLSV PGS AI DH PR C
Sbjct: 354 FVTNFLLR*VFQWFLISLSVRPGSRPAISDHRLPRRRC 241
Score = 39.7 bits (82), Expect = 0.007
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = -1 / -2
Query: 174 VGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 10
+G+ QLL VP +LD +I Q C RPP+ + ++Q +E+ F+ G+
Sbjct: 370 LGLTFVCYQLLAQISVPVVLDFVICSARQSPCYQRPPIAKKTMQPKNELLFIGGK 206
>gb|BX000680.1|BX000680 BX000680 Pinus pinaster xylem Pinus pinaster cDNA clone PPSW14,
mRNA sequence
Length = 235
Score = 82.3 bits (177), Expect = 2e-015
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = +1 / -2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTH 180
G + DEE+LII LH +LGNRWS IA ++PGRTDNE+KN WN+ + KKL G + H
Sbjct: 231 GHISADEEELIIRLHNLLGNRWSLIAGRVPGRTDNEVKNYWNTRLSKKLGSTGDNLQGH 55
Score = 39.3 bits (81), Expect = 0.010
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / +2
Query: 161 PFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
P SF L F F SLSVLPG+ AI DHL P
Sbjct: 74 PVLPSFLLKRVFQ*FFTSLSVLPGTLPAINDHLLP 178
>gb|CF398623.1|CF398623 RTDS3_13_E02.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_13_E02_A022 3', mRNA sequence
Length = 754
Score = 82.3 bits (177), Expect = 2e-015
Identities = 31/62 (50%), Positives = 48/62 (77%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G +++E++LII LH++LGN+WS IA +LPGR+ NEIKN W+ +K+KL ++G+ TH+
Sbjct: 47 G*LSEEEDELIIRLHSLLGNKWSLIAGRLPGRSGNEIKNHWSIHMKRKLSRRGLHAQTHR 226
Query: 184 PL 189
L
Sbjct: 227 SL 232
Score = 33.9 bits (69), Expect = 0.46
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2 / -2
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 51
+F M F ISL PG+ AI DHLFPR+
Sbjct: 192 NFLFMCMLQWFFISLPDRPGNLPAIRDHLFPRS 94
>gb|CF474496.1|CF474496 RTWW2_9_D02.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_9_D02_A021 3', mRNA sequence
Length = 472
Score = 82.3 bits (177), Expect = 2e-015
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +1 / -3
Query: 19 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
DEEDLI+ LH +LGNRWS IA +LPGRTDNEIKN WNS + KKL
Sbjct: 446 DEEDLIVRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKL 315
Score = 37.9 bits (78), Expect = 0.027
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = -2 / +1
Query: 128 FHRFLISLSVLPGSCAAI*DHLFPRTAC 45
F FLISLSV PGS AI DH PR C
Sbjct: 337 FQ*FLISLSVRPGSRPAINDHRLPRRRC 420
Score = 37.9 bits (78), Expect = 0.027
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -1 / +3
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
QLL + VP +LD ++ Q C RPP+ + ++Q ++E+ V
Sbjct: 315 QLLTEMTVPVVLDFVVCSSRQSSCYQRPPIAKKAMQPNNEILLV 446
>gb|CO362169.1|CO362169 RTK1_1_F07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_1_F07_A029 5', mRNA sequence
Length = 809
Score = 82.3 bits (177), Expect = 2e-015
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + DEEDLII LH +LGNRWS IA +LPGRTDNEIKN W++ + KKL
Sbjct: 254 GNISPDEEDLIIRLHGLLGNRWSLIAGRLPGRTDNEIKNYWHTQMSKKL 400
Score = 37.0 bits (76), Expect = 0.050
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 119 FLISLSVLPGSCAAI*DHLFPRTAC 45
FLISLSV PGS AI DH PR C
Sbjct: 369 FLISLSVRPGSRPAIKDHRLPRRPC 295
>gb|CO368386.1|CO368386 RTK1_40_G08.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_40_G08_A029 3', mRNA sequence
Length = 894
Score = 82.3 bits (177), Expect = 2e-015
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1 / -2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + DEEDLII LH +LGNRWS IA +LPGRTDNEIKN W++ + KKL
Sbjct: 623 GNISPDEEDLIIRLHGLLGNRWSLIAGRLPGRTDNEIKNYWHTHMSKKL 477
Score = 37.0 bits (76), Expect = 0.050
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2 / +1
Query: 119 FLISLSVLPGSCAAI*DHLFPRTAC 45
FLISLSV PGS AI DH PR C
Sbjct: 508 FLISLSVRPGSRPAIKDHRLPRRPC 582
>gb|CF391868.1|CF391868 RTDR3_10_B04.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_B04_A022 5', mRNA
sequence
Length = 748
Score = 81.8 bits (176), Expect = 3e-015
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 162
G + DEE+LII LH +LGNRWS IA ++PGRTDNE+KN WN+ + KKL G
Sbjct: 266 GHISADEEELIIRLHNLLGNRWSLIAGRVPGRTDNEVKNYWNTRLSKKLGSTG 424
Score = 39.3 bits (81), Expect = 0.010
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / -2
Query: 161 PFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
P SF L F F SLSVLPG+ AI DHL P
Sbjct: 423 PVLPSFLLKRVFQ*FFTSLSVLPGTLPAINDHLLP 319
>gb|CF395727.1|CF395727 RTDS2_16_B07.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_16_B07_A021 5', mRNA sequence
Length = 782
Score = 81.8 bits (176), Expect = 3e-015
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + DEEDLI+ LH +LGNRWS IA +LPGRTDNEIKN WN + KKL
Sbjct: 268 GNISPDEEDLIVRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNCHLCKKL 414
Score = 40.1 bits (83), Expect = 0.005
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
SF +F FLISLSV PGS AI DH PR C
Sbjct: 413 SFLQR*QFQ*FLISLSVRPGSRPAISDHRLPRRRC 309
Score = 35.7 bits (73), Expect = 0.13
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1 / -3
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
QLL VP +LD ++ P Q CN P + + ++Q ++E+ +
Sbjct: 414 QLLAKVTVPVVLDFVVGSPRQSSCN**PSIAKKAMQPNNEILLI 283
>gb|CF397272.1|CF397272 RTDS3_2_C01.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_2_C01_A022 5', mRNA sequence
Length = 598
Score = 81.8 bits (176), Expect = 3e-015
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + DEEDLI+ LH +LGNRWS IA +LPGRTDNEIKN WN + KKL
Sbjct: 234 GNISPDEEDLIVRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNCHLCKKL 380
Score = 40.1 bits (83), Expect = 0.005
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
SF +F FLISLSV PGS AI DH PR C
Sbjct: 379 SFLQR*QFQ*FLISLSVRPGSRPAISDHRLPRRRC 275
Score = 35.7 bits (73), Expect = 0.13
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1 / -3
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
QLL VP +LD ++ P Q CN P + + ++Q ++E+ +
Sbjct: 380 QLLAKVTVPVVLDFVVGSPRQSSCN**PSIAKKAMQPNNEILLI 249
>gb|CF668816.1|CF668816 RTCNT1_38_G11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_38_G11_A029 5', mRNA sequence
Length = 814
Score = 81.8 bits (176), Expect = 3e-015
Identities = 35/63 (55%), Positives = 42/63 (66%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G EE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL + T K
Sbjct: 206 GNICPAEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKLSSQESQDKTSK 385
Query: 184 PLT 192
L+
Sbjct: 386 NLS 394
Score = 41.0 bits (85), Expect = 0.003
Identities = 21/35 (60%), Positives = 21/35 (60%)
Frame = -2 / -2
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
SF L F FLISLSV PGS AI DH PR C
Sbjct: 351 SFLLR*VFQ*FLISLSVRPGSRPAISDHRLPRRRC 247
>gb|CO361388.1|CO361388 NDL2_4_C06.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_4_C06_A029 5', mRNA sequence
Length = 840
Score = 81.8 bits (176), Expect = 3e-015
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + DEE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 173 GNISPDEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTHLGKKL 319
Score = 39.3 bits (81), Expect = 0.010
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -1 / -3
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQ 43
QLL + VP +LD ++ P Q C+ RPP+ ++++Q
Sbjct: 319 QLLAEMSVPVVLDFVVCPTRQSSCDKRPPIAKEAMQ 212
Score = 37.9 bits (78), Expect = 0.027
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = -2 / -1
Query: 128 FHRFLISLSVLPGSCAAI*DHLFPRTAC 45
F FLISLSV PGS AI DH PR C
Sbjct: 297 FQ*FLISLSVRPGSRPAISDHRLPRRRC 214
>gb|DR069928.1|DR069928 RTDK1_10_F06.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_10_F06_A029 3', mRNA sequence
Length = 794
Score = 81.8 bits (176), Expect = 3e-015
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +1 / -3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 162
G + DEE+LII LH +LGNRWS IA ++PGRTDNE+KN WN+ + KKL G
Sbjct: 510 GHISADEEELIIRLHNLLGNRWSLIAGRVPGRTDNEVKNYWNTRLSKKLGSTG 352
Score = 39.3 bits (81), Expect = 0.010
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / +2
Query: 161 PFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
P SF L F F SLSVLPG+ AI DHL P
Sbjct: 353 PVLPSFLLKRVFQ*FFTSLSVLPGTLPAINDHLLP 457
>gb|DR072123.1|DR072123 RTDK1_24_F01.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_24_F01_A029 3', mRNA sequence
Length = 741
Score = 81.8 bits (176), Expect = 3e-015
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +1 / -1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 162
G + DEE+LII LH +LGNRWS IA ++PGRTDNE+KN WN+ + KKL G
Sbjct: 456 GHISADEEELIIRLHNLLGNRWSLIAGRVPGRTDNEVKNYWNTRLSKKLGSTG 298
Score = 39.3 bits (81), Expect = 0.010
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / +2
Query: 161 PFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
P SF L F F SLSVLPG+ AI DHL P
Sbjct: 299 PVLPSFLLKRVFQ*FFTSLSVLPGTLPAINDHLLP 403
>gb|DR094442.1|DR094442 STRR1_14_D03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_14_D03_A033 5', mRNA sequence
Length = 887
Score = 81.8 bits (176), Expect = 3e-015
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 162
G + DEE+LII LH +LGNRWS IA ++PGRTDNE+KN WN+ + KKL G
Sbjct: 286 GHISADEEELIIRLHNLLGNRWSLIAGRVPGRTDNEVKNYWNTRLSKKLGSTG 444
Score = 39.3 bits (81), Expect = 0.010
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / -1
Query: 161 PFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
P SF L F F SLSVLPG+ AI DHL P
Sbjct: 443 PVLPSFLLKRVFQ*FFTSLSVLPGTLPAINDHLLP 339
>gb|DR386158.1|DR386158 RTHG1_13_G03.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_13_G03_A029 3', mRNA sequence
Length = 786
Score = 81.8 bits (176), Expect = 3e-015
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 162
G + DEE+LII LH +LGNRWS IA ++PGRTDNE+KN WN+ + KKL G
Sbjct: 11 GHISADEEELIIRLHNLLGNRWSLIAGRVPGRTDNEVKNYWNTRLSKKLGSTG 169
Score = 39.3 bits (81), Expect = 0.010
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / -1
Query: 161 PFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
P SF L F F SLSVLPG+ AI DHL P
Sbjct: 168 PVLPSFLLKRVFQ*FFTSLSVLPGTLPAINDHLLP 64
>gb|DR694940.1|DR694940 EST1085033 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEI64 3' end, mRNA sequence
Length = 848
Score = 81.8 bits (176), Expect = 3e-015
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + DEE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 295 GNISPDEEELIIRLHHLLGNRWSLIAGRLPGRTDNEIKNYWNTHMSKKL 441
Score = 38.4 bits (79), Expect = 0.019
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
SF L+ F FLISLSV PG+ AI DH PR
Sbjct: 440 SFLLI*VFQ*FLISLSVRPGNLPAISDHRLPR 345
Score = 30.3 bits (61), Expect = 5.9
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1 / -3
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 13
QLL VP +LD ++ W C RP + + ++ + E + G
Sbjct: 441 QLLAHMSVPVVLDFVVCSTW*SSCYKRPSIAKKVMEPNYEFLLIRG 304
>gb|DT639133.1|DT639133 EST1154064 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHN42 3' end, mRNA sequence
Length = 857
Score = 81.8 bits (176), Expect = 3e-015
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + DEE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 303 GNISPDEEELIIRLHHLLGNRWSLIAGRLPGRTDNEIKNYWNTHMSKKL 449
Score = 38.4 bits (79), Expect = 0.019
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = -2 / -2
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
SF L+ F FLISLSV PG+ AI DH PR
Sbjct: 448 SFLLI*VFQ*FLISLSVRPGNLPAISDHRLPR 353
Score = 30.3 bits (61), Expect = 5.9
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1 / -1
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 13
QLL VP +LD ++ W C RP + + ++ + E + G
Sbjct: 449 QLLAHMSVPVVLDFVVCSTW*SSCYKRPSIAKKVMEPNYEFLLIRG 312
>gb|CV034016.1|CV034016 RTNACL1_38_B11.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_38_B11_A029 3', mRNA sequence
Length = 821
Score = 80.9 bits (174), Expect = 5e-015
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +1 / +1
Query: 58 GNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 189
GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 1 GNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 132
Score = 47.3 bits (99), Expect = 3e-005
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = -1 / -3
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPV 61
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V
Sbjct: 162 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLV 4
Score = 45.5 bits (95), Expect = 1e-004
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 63
G W GS+P +F LM F F ISLSV PG+ AI DHL
Sbjct: 128 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHL 6
>gb|DR686505.1|DR686505 EST1076583 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABG77 3' end, mRNA sequence
Length = 681
Score = 80.5 bits (173), Expect = 7e-015
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E+++I L +G+RWS IAAQLPGRTDN+IKN WNS +KKKL K D T
Sbjct: 272 GGFSEEEDNMIYSLFLGIGSRWSMIAAQLPGRTDNDIKNHWNSRLKKKLLGKRKDNQTQS 451
Query: 184 PLTE 195
+ +
Sbjct: 452 QVKQ 463
Score = 51.8 bits (109), Expect = 1e-006
Identities = 26/42 (61%), Positives = 27/42 (64%)
Frame = -2 / -1
Query: 182 LWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
LWV S F SFF EF F ISLSVLPG+ AAI DHL P
Sbjct: 450 LWV*LSFRFPRSFFFSLEFQWFFISLSVLPGNWAAIIDHLLP 325
Score = 41.5 bits (86), Expect = 0.002
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -1 / -3
Query: 180 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 22
+G+ I +F + LL VP + +II PWQL CN RPP + + + + F
Sbjct: 448 LGLIIFSFP*KFLLQP*VPVVFYIIICSPWQLGCNHRPPATDTEKEAINHIIF 290
Score = 29.8 bits (60), Expect = 8.1
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3 / +1
Query: 63 QVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQAT 188
QVV +CS ARE+ ** ++ +EL +EE E +P+++
Sbjct: 331 QVVYDCSPVARENR**YKKPLELKAEEETSRETKR*SNPESS 456
>gb|DT633408.1|DT633408 EST1148339 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFU59 3' end, mRNA sequence
Length = 690
Score = 80.5 bits (173), Expect = 7e-015
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E+++I L +G+RWS IAAQLPGRTDN+IKN WNS +KKKL K D T
Sbjct: 280 GGFSEEEDNMIYSLFLGIGSRWSMIAAQLPGRTDNDIKNHWNSRLKKKLLGKRKDNQTQS 459
Query: 184 PLTE 195
+ +
Sbjct: 460 QVKQ 471
Score = 51.8 bits (109), Expect = 1e-006
Identities = 26/42 (61%), Positives = 27/42 (64%)
Frame = -2 / -2
Query: 182 LWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
LWV S F SFF EF F ISLSVLPG+ AAI DHL P
Sbjct: 458 LWV*LSFRFPRSFFFSLEFQWFFISLSVLPGNWAAIIDHLLP 333
Score = 41.5 bits (86), Expect = 0.002
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -1 / -1
Query: 180 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 22
+G+ I +F + LL VP + +II PWQL CN RPP + + + + F
Sbjct: 456 LGLIIFSFP*KFLLQP*VPVVFYIIICSPWQLGCNHRPPATDTEKEAINHIIF 298
Score = 29.8 bits (60), Expect = 8.1
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3 / +3
Query: 63 QVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQAT 188
QVV +CS ARE+ ** ++ +EL +EE E +P+++
Sbjct: 339 QVVYDCSPVARENR**YKKPLELKAEEETSRETKR*SNPESS 464
>gb|DR016585.1|DR016585 STRS1_11_A12.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_11_A12_A034 3', mRNA sequence
Length = 581
Score = 68.4 bits (146), Expect(2) = 8e-015
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +1 / +3
Query: 64 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 186
RWS IA+ LPGRTDNEIKN+WN+ +KK+L Q G+D H P
Sbjct: 126 RWSTIASHLPGRTDNEIKNVWNTRLKKRLLQTGVDIANHVP 248
Score = 54.0 bits (114), Expect = 3e-007
Identities = 23/42 (54%), Positives = 24/42 (57%)
Frame = -2 / -2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLF 60
G W S P C F FH F ISLSVLPG C AI DHL+
Sbjct: 247 GTWFAMSTPVCRRRFFKRVFHTFFISLSVLPGRCEAIVDHLY 122
Score = 30.7 bits (62), Expect(2) = 8e-015
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQI 78
F+ EE II+LH +LGNR+ I
Sbjct: 6 FSLKEEQTIIQLHQILGNRYVNI 74
>gb|BE520012.1|BE520012 NXCI_028_B03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_028_B03 5' similar to Arabidopsis
thaliana sequence At5g52600 MYB82 (gb|AAF14064.1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 328
Score = 80.0 bits (172), Expect = 9e-015
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
G + DEEDLII LH +LGNRWS IA ++PGRTDNEIKN WN+ KK
Sbjct: 141 GNISPDEEDLIIRLHKLLGNRWSLIAGRIPGRTDNEIKNYWNTRSNKK 284
Score = 40.6 bits (84), Expect = 0.004
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -1 / -3
Query: 144 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
L+ VP +LD IIS W N RPPV + ++ D+VFF+
Sbjct: 281 LVGTSVPVVLDFIISSTWYAPRN*RPPVSQQFMKSYDKVFFI 156
Score = 38.8 bits (80), Expect = 0.014
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
+F L F FLISLSVLPG AI DH FP
Sbjct: 286 AFLLERVFQ*FLISLSVLPGMRPAINDHRFP 194
>gb|DR686108.1|DR686108 EST1076186 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABC41 3' end, mRNA sequence
Length = 752
Score = 80.0 bits (172), Expect = 9e-015
Identities = 32/62 (51%), Positives = 46/62 (74%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E+D+I L+ +G+RWS IAAQLPGRTDN+IKN WN+ +KKKL K N ++
Sbjct: 358 GDFSEEEDDIICTLYTSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKCSKDNDNQ 537
Query: 184 PL 189
+
Sbjct: 538 QI 543
Score = 47.8 bits (100), Expect = 2e-005
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = -1 / -3
Query: 192 SKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 22
S L+ V + AF Q L RVP +L +++ PWQL CN RP +Q ++V F
Sbjct: 546 SDLLIIVVLAAFAKQFFLQPRVPVVLYVVVCSPWQLGCNDRPSASNAGIQGANDVVF 376
Score = 36.6 bits (75), Expect = 0.069
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
+FF F F +SLSV PG+ AA+ DHL P
Sbjct: 503 NFFFSRVFQ*FFMSLSVRPGNWAAMIDHLLP 411
>gb|DR744906.1|DR744906 RTCU1_25_E06.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_25_E06_A029 5', mRNA sequence
Length = 691
Score = 80.0 bits (172), Expect = 9e-015
Identities = 32/62 (51%), Positives = 46/62 (74%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E+D+I L+ +G+RWS IAAQLPGRTDN+IKN WN+ +KKKL K N ++
Sbjct: 327 GDFSEEEDDIICTLYTSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKCSKDNDNQ 506
Query: 184 PL 189
+
Sbjct: 507 QI 512
Score = 47.8 bits (100), Expect = 2e-005
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = -1 / -3
Query: 192 SKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 22
S L+ V + AF Q L RVP +L +++ PWQL CN RP +Q ++V F
Sbjct: 515 SDLLIIVVLAAFAKQFFLQPRVPVVLYVVVCSPWQLGCNDRPSASNAGIQGANDVVF 345
Score = 36.6 bits (75), Expect = 0.069
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
+FF F F +SLSV PG+ AA+ DHL P
Sbjct: 472 NFFFSRVFQ*FFMSLSVRPGNWAAMIDHLLP 380
>gb|DT633531.1|DT633531 EST1148462 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFV86 3' end, mRNA sequence
Length = 817
Score = 80.0 bits (172), Expect = 9e-015
Identities = 32/62 (51%), Positives = 46/62 (74%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E+D+I L+ +G+RWS IAAQLPGRTDN+IKN WN+ +KKKL K N ++
Sbjct: 366 GDFSEEEDDIICTLYTSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKCSKDNDNQ 545
Query: 184 PL 189
+
Sbjct: 546 QI 551
Score = 47.8 bits (100), Expect = 2e-005
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = -1 / -3
Query: 192 SKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 22
S L+ V + AF Q L RVP +L +++ PWQL CN RP +Q ++V F
Sbjct: 554 SDLLIIVVLAAFAKQFFLQPRVPVVLYVVVCSPWQLGCNDRPSASNAGIQGANDVVF 384
Score = 36.6 bits (75), Expect = 0.069
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
+FF F F +SLSV PG+ AA+ DHL P
Sbjct: 511 NFFFSRVFQ*FFMSLSVRPGNWAAMIDHLLP 419
>gb|DR386238.1|DR386238 RTHG1_13_G03.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_13_G03_A029 5', mRNA sequence
Length = 600
Score = 79.6 bits (171), Expect = 1e-014
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 162
G + DEE+LII LH +LGNRWS IA ++PGRTD+E+KN WN+ + KKL G
Sbjct: 284 GHISADEEELIIRLHNLLGNRWSLIAGRVPGRTDDEVKNYWNTRLSKKLGSTG 442
Score = 36.6 bits (75), Expect = 0.069
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -2 / -1
Query: 161 PFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
P SF L F F S SVLPG+ AI DHL P
Sbjct: 441 PVLPSFLLKRVFQ*FFTSSSVLPGTLPAINDHLLP 337
>gb|AW064634.1|AW064634 ST33H05 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST33H05, mRNA sequence
Length = 584
Score = 79.1 bits (170), Expect = 2e-014
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G F++DE+DLI++LHA+LGN+WS IA +L RTDNEIKN W S +K+KL
Sbjct: 305 GFFSEDEDDLILKLHALLGNKWSLIAGRLXRRTDNEIKNYWXSHLKRKL 451
Score = 35.2 bits (72), Expect = 0.18
Identities = 19/36 (52%), Positives = 20/36 (55%)
Frame = -2 / -3
Query: 152 LSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+SF E F ISLSV AI DHLFPR AC
Sbjct: 453 VSFRFRCEXQ*FFISLSVRLXKRPAIKDHLFPRRAC 346
>gb|CF396536.1|CF396536 RTDS2_22_H07.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_22_H07_A021 5', mRNA sequence
Length = 777
Score = 79.1 bits (170), Expect = 2e-014
Identities = 36/94 (38%), Positives = 56/94 (59%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 183
G F+++E+++I L+ +G+RWS IAAQLPGRTDN+IKN WN+ +KKKL K + + +
Sbjct: 157 GGFSEEEDNIICTLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKTKERQSRR 336
Query: 184 PLTEADHGGAAPTISTERTSGSSDINPSSTGPLG 285
+ + +T TS + +I P G
Sbjct: 337 LAGAKEESKDMQSYATPGTSTNPNIYAPQQQPGG 438
Score = 46.0 bits (96), Expect = 9e-005
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = -2 / -2
Query: 167 SMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
S+ F SFF F FLISLSVLPGS AA+ DHL P
Sbjct: 320 SLVFPSSFFFSLVFQ*FLISLSVLPGSWAAMIDHLLP 210
>gb|CF399612.1|CF399612 RTDS3_26_H01.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_26_H01_A022 5', mRNA sequence
Length = 387
Score = 79.1 bits (170), Expect = 2e-014
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
G + DEEDLI+ LH +LGNRWS IA +LPGRTDNE+KN WN + KK
Sbjct: 242 GNISPDEEDLIVRLHRLLGNRWSLIAGRLPGRTDNELKNYWNCHLCKK 385
Score = 37.5 bits (77), Expect = 0.036
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
SF +F FL SLSV PGS AI DH PR C
Sbjct: 387 SFLQR*QFQ*FLSSLSVRPGSRPAISDHRLPRRRC 283
>gb|CF470618.1|CF470618 RTDS1_13_H10.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_13_H10_A015 5', mRNA sequence
Length = 723
Score = 79.1 bits (170), Expect = 2e-014
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
G F+ +EE++II L A L NRW+QIA LPGRTD EIKN W+SC+KKK
Sbjct: 346 GNFSTEEENVIISLQARLNNRWAQIAKHLPGRTDTEIKNYWHSCLKKK 489
Score = 54.0 bits (114), Expect = 3e-007
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = -1 / -1
Query: 147 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 4
L L A VP ILD I P WQ+ CNL PPV ++ DD++ F G+ P
Sbjct: 489 LFLQAAVPVILDFSIRPSWQVFCNLCPPVI*SGLKTDDDILFFSGKIP 346
Score = 33.4 bits (68), Expect = 0.63
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2 / -2
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 63
+FF FLIS+SVLPG C AI HL
Sbjct: 491 AFFFRQLCQ*FLISVSVLPGKCFAICAHL 405
>gb|CO170303.1|CO170303 NDL1_13_D05.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_13_D05_A029 3', mRNA sequence
Length = 798
Score = 79.1 bits (170), Expect = 2e-014
Identities = 32/49 (65%), Positives = 38/49 (77%)
Frame = +1 / -1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + EE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 558 GDISPAEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTRLSKKL 412
Score = 42.8 bits (89), Expect = 8e-004
Identities = 21/35 (60%), Positives = 21/35 (60%)
Frame = -2 / +2
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
SF L F FLISLSV PGS AI DH PR C
Sbjct: 413 SFLLRRVFQ*FLISLSVRPGSRPAISDHRLPRRRC 517
Score = 31.6 bits (64), Expect = 2.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1 / +1
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 13
QL VP +LD ++ P Q C PP+ + +VQ ++++ G
Sbjct: 412 QLFA*TSVPVVLDFVVCSPGQPSCYQ*PPITKKAVQPNNQLLLSRG 549
>gb|DR058733.1|DR058733 RTNIT1_13_C07.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_13_C07_A029 5', mRNA sequence
Length = 592
Score = 79.1 bits (170), Expect = 2e-014
Identities = 32/49 (65%), Positives = 38/49 (77%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + EE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 233 GDISPAEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTRLSKKL 379
Score = 42.8 bits (89), Expect = 8e-004
Identities = 21/35 (60%), Positives = 21/35 (60%)
Frame = -2 / -2
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
SF L F FLISLSV PGS AI DH PR C
Sbjct: 378 SFLLRRVFQ*FLISLSVRPGSRPAISDHRLPRRRC 274
Score = 31.6 bits (64), Expect = 2.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1 / -1
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 13
QL VP +LD ++ P Q C PP+ + +VQ ++++ G
Sbjct: 379 QLFA*TSVPVVLDFVVCSPGQPSCYQ*PPITKKAVQPNNQLLLSRG 242
>gb|DR098778.1|DR098778 STRR1_47_G01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_47_G01_A033 5', mRNA sequence
Length = 676
Score = 79.1 bits (170), Expect = 2e-014
Identities = 32/49 (65%), Positives = 38/49 (77%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + EE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 203 GDISPAEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTRLSKKL 349
Score = 42.8 bits (89), Expect = 8e-004
Identities = 21/35 (60%), Positives = 21/35 (60%)
Frame = -2 / -2
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
SF L F FLISLSV PGS AI DH PR C
Sbjct: 348 SFLLRRVFQ*FLISLSVRPGSRPAISDHRLPRRRC 244
Score = 31.6 bits (64), Expect = 2.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1 / -1
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 13
QL VP +LD ++ P Q C PP+ + +VQ ++++ G
Sbjct: 349 QLFA*TSVPVVLDFVVCSPGQPSCYQ*PPITKKAVQPNNQLLLSRG 212
>gb|AW065119.1|AW065119 ST39H05 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST39H05, mRNA sequence
Length = 586
Score = 78.7 bits (169), Expect = 2e-014
Identities = 32/49 (65%), Positives = 38/49 (77%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + EE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 276 GDVSPAEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTRLSKKL 422
Score = 43.7 bits (91), Expect = 4e-004
Identities = 22/49 (44%), Positives = 24/49 (48%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 3
SF L F FLISLSV PGS AI DH PR C + +P
Sbjct: 421 SFLLRRVFQ*FLISLSVRPGSRPAISDHRLPRRRCSRIISSSSAGETSP 275
Score = 31.6 bits (64), Expect = 2.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1 / -3
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 13
QL VP +LD ++ P Q C PP+ + +VQ ++++ G
Sbjct: 422 QLFA*TSVPVVLDFVVCSPGQPSCYQ*PPITKKAVQPNNQLLLSRG 285
>gb|DR059561.1|DR059561 RTNIT1_18_A02.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_18_A02_A029 5', mRNA sequence
Length = 737
Score = 78.7 bits (169), Expect = 2e-014
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
G + +EE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KK
Sbjct: 227 GNISPEEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTHMSKK 370
Score = 42.8 bits (89), Expect = 8e-004
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = -2 / -3
Query: 146 FFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
F L+ F FLISLSV PGS AI DH FPR C
Sbjct: 369 FLLI*VFQ*FLISLSVRPGSRPAIRDHRFPRRRC 268
Score = 37.9 bits (78), Expect = 0.027
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = -1 / -2
Query: 147 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
LL VP ILD ++ Q C RPP+ + ++Q ++E+FF+
Sbjct: 370 LLAHMSVPVILDFVVCSTRQSSCYQRPPISKKAMQPNNELFFL 242
>gb|DR081462.1|DR081462 RTFEPL1_29_G04.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_29_G04_A029 5', mRNA sequence
Length = 518
Score = 78.7 bits (169), Expect = 2e-014
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
G + +EE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KK
Sbjct: 243 GNISPEEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTHMSKK 386
Score = 42.8 bits (89), Expect = 8e-004
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = -2 / -2
Query: 146 FFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
F L+ F FLISLSV PGS AI DH FPR C
Sbjct: 385 FLLI*VFQ*FLISLSVRPGSRPAIRDHRFPRRRC 284
Score = 37.9 bits (78), Expect = 0.027
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = -1 / -1
Query: 147 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
LL VP ILD ++ Q C RPP+ + ++Q ++E+FF+
Sbjct: 386 LLAHMSVPVILDFVVCSTRQSSCYQRPPISKKAMQPNNELFFL 258
>gb|DR109956.1|DR109956 RTS1_1_B02.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_1_B02_A029 3', mRNA sequence
Length = 729
Score = 78.7 bits (169), Expect = 2e-014
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = +1 / -2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPN 174
G +E+ LI+ELH + GNRWS+IA QLPGRTDNEIKN W + IKK +++ D N
Sbjct: 686 GNITPEEQLLILELHRLWGNRWSKIARQLPGRTDNEIKNYWRTRIKKHIQKAHCDAN 516
Score = 46.9 bits (98), Expect = 5e-005
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = -2 / +1
Query: 143 FLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
FLM FLISLSVLPGSC AI DHL P+
Sbjct: 547 FLMRVLQ*FLISLSVLPGSCRAILDHLLPQ 636
Score = 46.0 bits (96), Expect = 9e-005
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1 / +3
Query: 174 VGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDD 34
V I + +AR P +LD ++SP W+L CNL P V ++V+ D
Sbjct: 516 VSIAVSFLNVFFNARSPVVLDFVVSPAWELPCNLGPSVTPETVEFKD 656
>gb|DR683171.1|DR683171 EST1073247 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAE88, mRNA sequence
Length = 846
Score = 78.7 bits (169), Expect = 2e-014
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +1 / -3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
G F+ +EE++II L A L NRW+QIA LPGRTD EIKN W SC+KKK
Sbjct: 649 GNFSTEEENVIISLQARLNNRWAQIAKHLPGRTDTEIKNYWRSCLKKK 506
Score = 52.2 bits (110), Expect = 1e-006
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = -1 / +2
Query: 147 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 4
L L A P ILD I P WQ+ CNL PPV ++ DD++ F G+ P
Sbjct: 506 LFLQAAAPVILDFSIRPSWQVFCNLCPPVI*SGLKTDDDILFFSGKIP 649
Score = 33.0 bits (67), Expect = 0.87
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2 / +3
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 63
+FF FLIS+SVLPG C AI HL
Sbjct: 504 AFFFRQLRQ*FLISVSVLPGKCFAICAHL 590
>gb|DR683172.1|DR683172 EST1073248 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAE88 3' end, mRNA sequence
Length = 779
Score = 78.7 bits (169), Expect = 2e-014
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
G F+ +EE++II L A L NRW+QIA LPGRTD EIKN W SC+KKK
Sbjct: 382 GNFSTEEENVIISLQARLNNRWAQIAKHLPGRTDTEIKNYWRSCLKKK 525
Score = 52.2 bits (110), Expect = 1e-006
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = -1 / -3
Query: 147 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 4
L L A P ILD I P WQ+ CNL PPV ++ DD++ F G+ P
Sbjct: 525 LFLQAAAPVILDFSIRPSWQVFCNLCPPVI*SGLKTDDDILFFSGKIP 382
Score = 33.0 bits (67), Expect = 0.87
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 63
+FF FLIS+SVLPG C AI HL
Sbjct: 527 AFFFRQLRQ*FLISVSVLPGKCFAICAHL 441
>gb|DT631296.1|DT631296 EST1146227 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF723 3' end, mRNA sequence
Length = 795
Score = 78.7 bits (169), Expect = 2e-014
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
G F+ +EE++II L A L NRW+QIA LPGRTD EIKN W SC+KKK
Sbjct: 390 GNFSTEEENVIISLQARLNNRWAQIAKHLPGRTDTEIKNYWRSCLKKK 533
Score = 52.2 bits (110), Expect = 1e-006
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = -1 / -2
Query: 147 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 4
L L A P ILD I P WQ+ CNL PPV ++ DD++ F G+ P
Sbjct: 533 LFLQAAAPVILDFSIRPSWQVFCNLCPPVI*SGLKTDDDILFFSGKIP 390
Score = 33.0 bits (67), Expect = 0.87
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2 / -3
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 63
+FF FLIS+SVLPG C AI HL
Sbjct: 535 AFFFRQLRQ*FLISVSVLPGKCFAICAHL 449
>gb|CF391408.1|CF391408 RTDR3_1_E10.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_1_E10_A022 5', mRNA
sequence
Length = 818
Score = 78.2 bits (168), Expect = 3e-014
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + DEEDLI+ LH +LGNRWS IA +L GRTDNEIKN WN + KKL
Sbjct: 235 GNISPDEEDLIVRLHRLLGNRWSLIAGRLAGRTDNEIKNYWNCHLCKKL 381
Score = 37.5 bits (77), Expect = 0.036
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
SF +F FLISLSV P S AI DH PR C
Sbjct: 380 SFLQR*QFQ*FLISLSVRPASRPAISDHRLPRRRC 276
Score = 35.7 bits (73), Expect = 0.13
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1 / -3
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
QLL VP +LD ++ P Q CN P + + ++Q ++E+ +
Sbjct: 381 QLLAKVTVPVVLDFVVGSPSQSSCN**PSIAKKAMQPNNEILLI 250
>gb|CF394327.1|CF394327 RTDS2_4_B08.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_4_B08_A021 5', mRNA sequence
Length = 493
Score = 78.2 bits (168), Expect = 3e-014
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + DEEDLI+ LH +LGNRWS IA +L GRTDNEIKN WN + KKL
Sbjct: 249 GNISPDEEDLIVRLHRLLGNRWSLIAGRLAGRTDNEIKNYWNCHLCKKL 395
Score = 37.5 bits (77), Expect = 0.036
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
SF +F FLISLSV P S AI DH PR C
Sbjct: 394 SFLQR*QFQ*FLISLSVRPASRPAISDHRLPRRRC 290
Score = 35.7 bits (73), Expect = 0.13
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1 / -3
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
QLL VP +LD ++ P Q CN P + + ++Q ++E+ +
Sbjct: 395 QLLAKVTVPVVLDFVVGSPSQSSCN**PSIAKKAMQPNNEILLI 264
>gb|CO367346.1|CO367346 RTK1_33_F05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_33_F05_A029 5', mRNA sequence
Length = 770
Score = 78.2 bits (168), Expect = 3e-014
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +1 / -3
Query: 61 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 189
N+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 768 NKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 640
Score = 47.3 bits (99), Expect = 3e-005
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = -1 / +1
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPV 61
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V
Sbjct: 610 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLV 768
Score = 45.5 bits (95), Expect = 1e-004
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = -2 / +2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 63
G W GS+P +F LM F F ISLSV PG+ AI DHL
Sbjct: 644 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHL 766
>gb|DR057870.1|DR057870 RTNIT1_8_G05.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_8_G05_A029 3', mRNA sequence
Length = 802
Score = 78.2 bits (168), Expect = 3e-014
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +1 / +3
Query: 61 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 189
N+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 3 NKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 131
Score = 47.3 bits (99), Expect = 3e-005
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = -1 / -3
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPV 61
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V
Sbjct: 161 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLV 3
Score = 45.5 bits (95), Expect = 1e-004
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = -2 / -1
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 63
G W GS+P +F LM F F ISLSV PG+ AI DHL
Sbjct: 127 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHL 5
>gb|DR384384.1|DR384384 RTHG1_1_H06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_1_H06_A029 5', mRNA sequence
Length = 739
Score = 78.2 bits (168), Expect = 3e-014
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + DEED+II +H +LGNRWS IA +LPGRTDNEIKN WN ++KK+
Sbjct: 247 GNISIDEEDVIIRMHRLLGNRWSLIAGRLPGRTDNEIKNHWNFHLQKKV 393
Score = 41.5 bits (86), Expect = 0.002
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -2 / -3
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+FF +F FLISLSV PG+ AI DH PR C
Sbjct: 392 TFFCRWKFQWFLISLSVRPGNRPAISDHRLPRRRC 288
Score = 36.1 bits (74), Expect = 0.094
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1 / -2
Query: 147 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 13
LLL +P +LD ++ PP C RPP+ + ++ ++ V + G
Sbjct: 390 LLLQMEIPVVLDFVVCPPR*PSCYQRPPIAKKAMHPNNNVLLIDG 256
>gb|DR384689.1|DR384689 RTHG1_3_H06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_3_H06_A029 5', mRNA sequence
Length = 820
Score = 78.2 bits (168), Expect = 3e-014
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G + DEED+II +H +LGNRWS IA +LPGRTDNEIKN WN ++KK+
Sbjct: 247 GNISIDEEDVIIRMHRLLGNRWSLIAGRLPGRTDNEIKNHWNFHLQKKV 393
Score = 41.5 bits (86), Expect = 0.002
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -2 / -3
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
+FF +F FLISLSV PG+ AI DH PR C
Sbjct: 392 TFFCRWKFQWFLISLSVRPGNRPAISDHRLPRRRC 288
Score = 36.1 bits (74), Expect = 0.094
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1 / -2
Query: 147 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 13
LLL +P +LD ++ PP C RPP+ + ++ ++ V + G
Sbjct: 390 LLLQMEIPVVLDFVVCPPR*PSCYQRPPIAKKAMHPNNNVLLIDG 256
>gb|CF396041.1|CF396041 RTDS2_20_C12.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_20_C12_A021 5', mRNA sequence
Length = 607
Score = 77.8 bits (167), Expect = 4e-014
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
G F+ +EE++II L A L NRW+QIA LPGRTD EIKN W++C+KKK
Sbjct: 348 GNFSTEEENVIISLQARLNNRWAQIAKHLPGRTDTEIKNYWHNCLKKK 491
Score = 50.5 bits (106), Expect = 4e-006
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = -1 / -3
Query: 147 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 10
L L A VP ILD I P WQ+ CNL PPV ++ DD++ F G+
Sbjct: 491 LFLQAVVPVILDFSIRPSWQVFCNLCPPVI*SGLKTDDDILFFSGK 354
Score = 33.4 bits (68), Expect = 0.63
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 63
+FF FLIS+SVLPG C AI HL
Sbjct: 493 AFFFRQLCQ*FLISVSVLPGKCFAICAHL 407
>gb|DR020641.1|DR020641 STRS1_38_G12.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_38_G12_A034 3', mRNA sequence
Length = 799
Score = 77.8 bits (167), Expect = 4e-014
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
G + DEEDLI+ + +LGNRWS IA +LPGRTDNEIKN WN+ + KK
Sbjct: 65 GNISPDEEDLIVRMRRLLGNRWSLIAGRLPGRTDNEIKNYWNTRLSKK 208
Score = 48.2 bits (101), Expect = 2e-005
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -1 / -1
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPP 1
+LL RVP +LDL+I PP Q C RPP+ + + ++EV + G P
Sbjct: 211 RLLAQTRVPVVLDLVICPPRQSSCYQRPPIAKKATHPNNEVLLIGGNVSP 62
Score = 37.9 bits (78), Expect = 0.027
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = -2 / -2
Query: 146 FFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
F L F FLISLSV PGS AI DH PR
Sbjct: 207 FLLRRVFQ*FLISLSVRPGSRPAISDHRLPR 115
>gb|DR020720.1|DR020720 STRS1_38_G12.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_38_G12_A034 5', mRNA sequence
Length = 688
Score = 77.8 bits (167), Expect = 4e-014
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
G + DEEDLI+ + +LGNRWS IA +LPGRTDNEIKN WN+ + KK
Sbjct: 219 GNISPDEEDLIVRMRRLLGNRWSLIAGRLPGRTDNEIKNYWNTRLSKK 362
Score = 48.2 bits (101), Expect = 2e-005
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -1 / -3
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPP 1
+LL RVP +LDL+I PP Q C RPP+ + + ++EV + G P
Sbjct: 365 RLLAQTRVPVVLDLVICPPRQSSCYQRPPIAKKATHPNNEVLLIGGNVSP 216
Score = 37.9 bits (78), Expect = 0.027
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = -2 / -1
Query: 146 FFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
F L F FLISLSV PGS AI DH PR
Sbjct: 361 FLLRRVFQ*FLISLSVRPGSRPAISDHRLPR 269
>gb|DR110104.1|DR110104 RTS1_8_C03.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_8_C03_A029 5', mRNA sequence
Length = 538
Score = 77.3 bits (166), Expect = 6e-014
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKK 144
G DEE+LII +HA+LGNRWS IA ++PGRTDNE+KN WN+ + K
Sbjct: 398 GNITTDEEELIIRMHALLGNRWSIIAGRVPGRTDNEVKNYWNTNLSK 538
Score = 37.0 bits (76), Expect = 0.050
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -2 / -2
Query: 128 FHRFLISLSVLPGSCAAI*DHLFPRTAC 45
F F SLSV PG+ AI DHL P+ AC
Sbjct: 522 FQ*FFTSLSVRPGTLPAIIDHLLPKRAC 439
>gb|DR016667.1|DR016667 STRS1_11_A12.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_11_A12_A034 5', mRNA sequence
Length = 556
Score = 68.4 bits (146), Expect(2) = 1e-013
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +1 / +2
Query: 64 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 186
RWS IA+ LPGRTDNEIKN+WN+ +KK+L Q G+D H P
Sbjct: 107 RWSTIASHLPGRTDNEIKNVWNTRLKKRLLQTGVDIANHVP 229
Score = 54.0 bits (114), Expect = 3e-007
Identities = 23/42 (54%), Positives = 24/42 (57%)
Frame = -2 / -2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLF 60
G W S P C F FH F ISLSVLPG C AI DHL+
Sbjct: 228 GTWFAMSTPVCRRRFFKRVFHTFFISLSVLPGRCEAIVDHLY 103
Score = 26.7 bits (53), Expect(2) = 1e-013
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 25 EDLIIELHAVLGNRWSQI 78
E II+LH +LGNR+ I
Sbjct: 2 EQTIIQLHQILGNRYVNI 55
>gb|CO361678.1|CO361678 NDL2_6_H01.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_6_H01_A029 3', mRNA sequence
Length = 830
Score = 76.0 bits (163), Expect = 2e-013
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +1 / +3
Query: 64 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 189
RWS IA +L GRTDNEIKN WNS IKKKL KG+DP TH PL
Sbjct: 252 RWSLIAGRLAGRTDNEIKNYWNSHIKKKLLSKGLDPKTHCPL 377
Score = 50.5 bits (106), Expect = 4e-006
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = -1 / -1
Query: 204 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 64
V+ L++ VG+G+ + Q LLD VP +L L++S P Q CN RPP
Sbjct: 392 VVGLAEGTVGLGVESLA*QFLLDVTVPVVLYLVVSSPCQSPCNKRPP 252
Score = 50.0 bits (105), Expect = 5e-006
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -2 / -2
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 63
G WVLGS P +FFLM F F ISLSV P + AI DHL
Sbjct: 373 GQWVLGSSPLLSNFFLM*LFQ*FFISLSVRPANLPAIRDHL 251
>gb|CO368639.1|CO368639 RTK1_41_H02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_41_H02_A029 5', mRNA sequence
Length = 782
Score = 75.1 bits (161), Expect = 3e-013
Identities = 28/47 (59%), Positives = 39/47 (82%)
Frame = +1 / +1
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKK 144
G F+++E+D+I L+ +G+RWS IAAQLPGRTDN+IKN WN+ +KK
Sbjct: 613 GDFSEEEDDIICTLYTSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKK 753
Score = 40.6 bits (84), Expect = 0.004
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -3
Query: 147 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 22
+ L RVP +L +++ PWQL CN RP +Q ++V F
Sbjct: 756 IFLQPRVPVVLYVVVCSPWQLGCNDRPSASNAGIQGANDVVF 631
Score = 37.9 bits (78), Expect = 0.027
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -2 / -1
Query: 158 FCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 57
F FF F F +SLSV PG+ AA+ DHL P
Sbjct: 767 FAKQFFFSRVFQ*FFMSLSVRPGNWAAMIDHLLP 666
>gb|DR015783.1|DR015783 STRS1_5_D02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_D02_A034 5', mRNA sequence
Length = 547
Score = 74.7 bits (160), Expect = 4e-013
Identities = 25/51 (49%), Positives = 41/51 (80%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 156
G + +E++L++ LH +LGNRW+ IA +LPGRTDNE+KN WN+ + K++++
Sbjct: 383 GNISPEEDELLVRLHRLLGNRWTLIAGRLPGRTDNEVKNYWNTQLSKRVQR 535
Score = 32.5 bits (66), Expect = 1.2
Identities = 16/28 (57%), Positives = 16/28 (57%)
Frame = -2 / -2
Query: 128 FHRFLISLSVLPGSCAAI*DHLFPRTAC 45
F F SLSV PGS AI HL PR C
Sbjct: 507 FQ*FFTSLSVRPGSRPAINVHLLPRRRC 424
>gb|AI725044.1|AI725044 943 PtIFG2 Pinus taeda cDNA clone 8825r, mRNA sequence
Length = 728
Score = 74.2 bits (159), Expect = 5e-013
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / +2
Query: 64 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 186
RWS IA+ LPGRTDNEIKN+WN+ +KK+L Q G+DP TH P
Sbjct: 17 RWSAIASHLPGRTDNEIKNVWNTHLKKRLLQIGVDPVTHAP 139
Score = 57.6 bits (122), Expect = 2e-008
Identities = 25/41 (60%), Positives = 25/41 (60%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 63
G WV GS P C F FH F ISLSVLPG C AI DHL
Sbjct: 138 GAWVTGSTPICRRRFFK*VFHTFFISLSVLPGRCEAIADHL 16
>gb|CF478238.1|CF478238 RTWW3_19_H07.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_19_H07_A022 5', mRNA sequence
Length = 744
Score = 73.8 bits (158), Expect = 7e-013
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +1 / -2
Query: 76 IAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHG 207
IA +LPGRTDNEIKN WN+ IK+KL KG+DP TH+PL E +G
Sbjct: 743 IAGRLPGRTDNEIKNYWNTHIKRKLLSKGLDPQTHRPLGEPYNG 612
Score = 34.8 bits (71), Expect = 0.24
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = -2 / +1
Query: 194 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI 75
S SG V GS P +F + F F ISLSV PG+ AI
Sbjct: 625 SPSGRCVWGSSPLLSNFLFI*VFQ*FFISLSVRPGNLPAI 744
>gb|CO175228.1|CO175228 NDL1_53_H05.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_53_H05_A029 3', mRNA sequence
Length = 692
Score = 73.8 bits (158), Expect = 7e-013
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +1 / -3
Query: 64 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLT 192
RWS IA ++PGRTDNEIKN WN+ + KKL +GIDP THK +T
Sbjct: 243 RWSIIAGRVPGRTDNEIKNYWNTNLSKKLAVRGIDPKTHKKIT 115
Score = 44.2 bits (92), Expect = 3e-004
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = -2 / +2
Query: 176 VLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 63
VLGS+P SF L F F ISLSV PG+ AI DHL
Sbjct: 131 VLGSIPLTASFLLKLVFQ*FFISLSVRPGTLPAIIDHL 244
>gb|CV033497.1|CV033497 RTNACL1_34_H05.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_34_H05_A029 5', mRNA sequence
Length = 724
Score = 72.4 bits (155), Expect = 2e-012
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +1 / +3
Query: 19 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 159
+EE LIIELH GNRWS+IA LPGRTDNEIKN W + +K KL +
Sbjct: 264 EEERLIIELHRRWGNRWSRIAQSLPGRTDNEIKNFWRTRMKGKLNSE 404
Score = 44.6 bits (93), Expect = 2e-004
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
SF M +FLISLSVLPG AI DHLFP+
Sbjct: 394 SFPFMRVLQKFLISLSVLPGKLCAIRDHLFPQ 299
Score = 35.2 bits (72), Expect = 0.18
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1 / -3
Query: 141 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPP 1
L A P ILD I+ P CN RP + +++ +++ FF + P
Sbjct: 386 LHASSPEILDFIVRPSR*TLCNTRPSISPTAMEFNNQTFFFRSDLAP 246
>gb|CV035967.1|CV035967 RTNACL1_43_E10.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_43_E10_A029 5', mRNA sequence
Length = 862
Score = 72.4 bits (155), Expect = 2e-012
Identities = 31/49 (63%), Positives = 35/49 (71%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
G +EE LII LH GNRWS+IA +LPGRTDNEIKN W + IK KL
Sbjct: 231 GKITPEEERLIIGLHGRWGNRWSRIARRLPGRTDNEIKNYWRTRIKGKL 377
Score = 36.6 bits (75), Expect = 0.069
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -2 / -1
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
+F L+ FLISLSVLPG+ A+ DHL P+
Sbjct: 376 NFPLIRVLQ*FLISLSVLPGNLRAMRDHLLPQ 281
Score = 36.1 bits (74), Expect = 0.094
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1 / -3
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
Q LD+ P ILD I+ CN RPPV +++ +++ FF+
Sbjct: 377 QFSLDSSSPVILDFIVRSSG*SPCNARPPVAPTAMKSNNQTFFL 246
>gb|DR089238.1|DR089238 RTAL1_7_A05.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_7_A05_A029 5', mRNA sequence
Length = 664
Score = 72.4 bits (155), Expect = 2e-012
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +1 / +2
Query: 19 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 159
+EE LIIELH GNRWS+IA LPGRTDNEIKN W + +K KL +
Sbjct: 230 EEERLIIELHRRWGNRWSRIAQSLPGRTDNEIKNFWRTRMKGKLNSE 370
Score = 44.6 bits (93), Expect = 2e-004
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -2 / -2
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
SF M +FLISLSVLPG AI DHLFP+
Sbjct: 360 SFPFMRVLQKFLISLSVLPGKLCAIRDHLFPQ 265
Score = 35.2 bits (72), Expect = 0.18
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1 / -1
Query: 141 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPP 1
L A P ILD I+ P CN RP + +++ +++ FF + P
Sbjct: 352 LHASSPEILDFIVRPSR*TLCNTRPSISPTAMEFNNQTFFFRSDLAP 212
>gb|DR384837.1|DR384837 RTHG1_4_H08.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_4_H08_A029 5', mRNA sequence
Length = 784
Score = 72.4 bits (155), Expect = 2e-012
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +1 / +2
Query: 19 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 159
+EE LIIELH GNRWS+IA LPGRTDNEIKN W + +K KL +
Sbjct: 269 EEERLIIELHRRWGNRWSRIAQSLPGRTDNEIKNFWRTRMKGKLNSE 409
Score = 44.6 bits (93), Expect = 2e-004
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -2 / -2
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
SF M +FLISLSVLPG AI DHLFP+
Sbjct: 399 SFPFMRVLQKFLISLSVLPGKLCAIRDHLFPQ 304
Score = 38.8 bits (80), Expect = 0.014
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1 / -1
Query: 141 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPP 1
L A P ILD I+ P CN RPP+ +++ +++ FF + P
Sbjct: 391 LHASSPEILDFIVRPSR*TLCNTRPPISPTAMEFNNQTFFFRSDLAP 251
>gb|DR096412.1|DR096412 STRR1_27_G02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_27_G02_A033 5', mRNA sequence
Length = 778
Score = 72.0 bits (154), Expect = 2e-012
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +1 / -2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
G + +EE+LII +H +LGNRWS IA +LPGRT EIKN WN+ I KK
Sbjct: 609 GNISPEEEELIIRMHRLLGNRWSLIAGRLPGRTGREIKNYWNTQICKK 466
Score = 35.7 bits (73), Expect = 0.13
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1 / +1
Query: 129 VP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
VP ILDL S PW C PP+ + ++ DD++ F+
Sbjct: 484 VPIILDLTTSTPW*SSCY**PPIAKKTMHSDDKLLFL 594
Score = 31.6 bits (64), Expect = 2.3
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -2 / +2
Query: 128 FHRFLISLSVLPGSCAAI*DHLFPRTAC 45
F FLIS V PG+ AI DH PR C
Sbjct: 485 FQ*FLISRPVRPGNRPAISDHRLPRRRC 568
>gb|DR023047.1|DR023047 STRS1_55_D09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_55_D09_A034 3', mRNA sequence
Length = 645
Score = 71.5 bits (153), Expect = 3e-012
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1 / +3
Query: 67 WSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 186
WS IA +LPGRTDNEIKN WNS +K+KL G+DP TH+P
Sbjct: 3 WSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTHRP 122
Score = 43.3 bits (90), Expect = 6e-004
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = -2 / -3
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DH 66
+G V GS P +SF EF FLISLSV PG AI DH
Sbjct: 124 NGRCVRGSTPMLISFLFRCEFQ*FLISLSVRPGKRPAIRDH 2
Score = 31.2 bits (63), Expect = 3.1
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1 / -2
Query: 198 SLSKWLVGVGINAFLPQLLLDARVP*ILDLII 103
+L K V GINA +L L RVP ILDL++
Sbjct: 134 NLLKRTVRQGINAHADKLSLQMRVPVILDLVV 39
>gb|AW065064.1|AW065064 ST39B10 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST39B10, mRNA sequence
Length = 587
Score = 70.6 bits (151), Expect = 6e-012
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCI 138
G + EE+LII LH +LGNRWS IA +LPGRTDNEIKN W +
Sbjct: 275 GDISPAEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWEHSV 409
Score = 37.0 bits (76), Expect = 0.050
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 119 FLISLSVLPGSCAAI*DHLFPRTAC 45
FLISLSV PGS AI DH PR C
Sbjct: 390 FLISLSVRPGSRPAISDHRLPRRRC 316
Score = 31.2 bits (63), Expect = 3.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1 / -2
Query: 141 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 13
LD P +LD ++ P Q C PP+ + +VQ ++++ G
Sbjct: 412 LDGVFPVVLDFVVCSPGQPSCYQ*PPITKKAVQPNNQLLLSRG 284
>gb|DR111182.1|DR111182 RTS1_16_A02.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_16_A02_A029 3', mRNA sequence
Length = 685
Score = 70.6 bits (151), Expect = 6e-012
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +1 / -2
Query: 22 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
EE LII+LH GNRWS IA LPGRTDNEIKN W + IKK+L
Sbjct: 186 EERLIIKLHRRWGNRWSSIAQNLPGRTDNEIKNHWRTRIKKRL 58
Score = 47.3 bits (99), Expect = 3e-005
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = -2 / +2
Query: 173 LGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 45
L + F S FL+ FLISLSVLPG A+ DHLFP+ C
Sbjct: 35 LSACRFRFSLFLIRVLQ*FLISLSVLPGKFCAMLDHLFPQRRC 163
Score = 43.3 bits (90), Expect = 6e-004
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -1 / +1
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
Q LD P ILD ++ P Q+ N RPPVP ++ +D+ FF+
Sbjct: 58 QSFLDTSSPVILDFVVRSPRQILRNARPPVPPTAM*FNDQTFFL 189
>gb|CF393923.1|CF393923 RTDS2_2_G07.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_2_G07_A021 3', mRNA sequence
Length = 668
Score = 68.8 bits (147), Expect = 2e-011
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +1 / -2
Query: 76 IAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 189
IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 664 IAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 551
Score = 42.4 bits (88), Expect = 0.001
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = -1 / +2
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCN 76
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN
Sbjct: 521 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCN 664
Score = 39.3 bits (81), Expect = 0.010
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2 / +3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI 75
G W GS+P +F LM F F ISLSV PG+ AI
Sbjct: 555 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAI 665
>gb|CO200971.1|CO200971 RTCNT2_2_F10.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_2_F10_A029 5', mRNA sequence
Length = 785
Score = 68.8 bits (147), Expect = 2e-011
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +1 / +3
Query: 34 IIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
II LH +LGNRWS IA +LPGRTDNEIKN W++ + KKL
Sbjct: 3 IIRLHGLLGNRWSLIAGRLPGRTDNEIKNYWHTHMSKKL 119
Score = 37.0 bits (76), Expect = 0.050
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 119 FLISLSVLPGSCAAI*DHLFPRTAC 45
FLISLSV PGS AI DH PR C
Sbjct: 88 FLISLSVRPGSRPAIKDHRLPRRPC 14
>gb|CF663690.1|CF663690 RTCNT1_4_C02.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_4_C02_A029 5', mRNA sequence
Length = 673
Score = 67.9 bits (145), Expect = 4e-011
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +1 / +1
Query: 22 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
EE LII+LH GNRWS+IA L GRTDNEIKN W + IKK+L
Sbjct: 493 EERLIIKLHHRWGNRWSRIAQNLSGRTDNEIKNYWRTRIKKRL 621
Score = 39.7 bits (82), Expect = 0.007
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -1 / -2
Query: 150 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 19
Q LD P ILD ++ P + N RPPVP ++L+++ FF+
Sbjct: 621 QSFLDTGSPVILDFVVRSPR*ILRNARPPVPPTVMELNNQTFFL 490
Score = 37.5 bits (77), Expect = 0.036
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -2 / -3
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 54
+ FL+ FLISLSVLP A+ DHLFP+
Sbjct: 620 NLFLIRVLQ*FLISLSVLPDKFCAMRDHLFPQ 525
>gb|CF475091.1|CF475091 RTWW2_5_F10.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_5_F10_A021 5', mRNA sequence
Length = 707
Score = 54.9 bits (116), Expect(2) = 5e-011
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +1 / +1
Query: 64 RWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
RWS IA+ LPGRTDNEIKN+W++ +KK+L
Sbjct: 430 RWSTIASHLPGRTDNEIKNVWSTRLKKRL 516
Score = 41.5 bits (86), Expect = 0.002
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -2 / -1
Query: 143 FLMHEFHRFLISLSVLPGSCAAI*DHL 63
F H FLISLSVLPG C AI DHL
Sbjct: 509 FFKRVLHTFLISLSVLPGRCEAIVDHL 429
Score = 32.5 bits (66), Expect(2) = 5e-011
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1 / +2
Query: 4 GAFAQDEEDLIIELHAVLGNR 66
G F+ +EED II+LH ++GNR
Sbjct: 212 GNFSPEEEDQIIKLHELIGNR 274
Score = 31.2 bits (63), Expect = 3.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1 / -3
Query: 171 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRP 67
G+ + LL P +LD ++ WQ+R N RP
Sbjct: 537 GLGFHTCETLLQTCAPHVLDFVVCSSWQVRSNSRP 433
>gb|CX646534.1|CX646534 COLD1_10_A05.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_10_A05_A029 3', mRNA sequence
Length = 785
Score = 67.0 bits (143), Expect = 8e-011
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +1 / +2
Query: 79 AAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 189
A +LPGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 2 AGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 112
Score = 39.7 bits (82), Expect = 0.007
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = -1 / -2
Query: 219 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRC 79
G A + L++ +G+G+++ Q LD VP +L L++ PP Q C
Sbjct: 142 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSC 2
Score = 37.5 bits (77), Expect = 0.036
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -2 / -3
Query: 185 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAA 78
G W GS+P +F LM F F ISLSV PG+ A
Sbjct: 108 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPA 1
>gb|DR690028.1|DR690028 EST1080114 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACQ27 3' end, mRNA sequence
Length = 778
Score = 54.0 bits (114), Expect(2) = 1e-010
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +1 / +3
Query: 94 GRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADH 204
G TDNEI+N WN+ IKKKLR GIDP H+ + A H
Sbjct: 276 GHTDNEIQNHWNTHIKKKLRHMGIDPVIHQSIIVARH 386
Score = 45.5 bits (95), Expect = 1e-004
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2 / -1
Query: 179 WVLGSMPFCLSFFLMHEFHRFLISLSVLP 93
W+ GS+P CLSFFLM F F ISLSV P
Sbjct: 361 WITGSIPMCLSFFLMWVFQ*FCISLSV*P 275
Score = 30.7 bits (62), Expect(2) = 1e-010
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1 / +2
Query: 22 EEDLIIELHAVLGNRWSQIA 81
++ LI+E H+ LGNRW++IA
Sbjct: 215 DKHLIMEPHSKLGNRWAKIA 274
>gb|DT635793.1|DT635793 EST1150724 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGK66 3' end, mRNA sequence
Length = 752
Score = 54.0 bits (114), Expect(2) = 1e-010
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +1 / +1
Query: 94 GRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADH 204
G TDNEI+N WN+ IKKKLR GIDP H+ + A H
Sbjct: 283 GHTDNEIQNHWNTHIKKKLRHMGIDPVIHQSIIVARH 393
Score = 45.5 bits (95), Expect = 1e-004
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2 / -1
Query: 179 WVLGSMPFCLSFFLMHEFHRFLISLSVLP 93
W+ GS+P CLSFFLM F F ISLSV P
Sbjct: 368 WITGSIPMCLSFFLMWVFQ*FCISLSV*P 282
Score = 30.7 bits (62), Expect(2) = 1e-010
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1 / +3
Query: 22 EEDLIIELHAVLGNRWSQIA 81
++ LI+E H+ LGNRW++IA
Sbjct: 222 DKHLIMEPHSKLGNRWAKIA 281
>gb|DR098178.1|DR098178 STRR1_39_D04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_39_D04_A033 5', mRNA sequence
Length = 690
Score = 66.1 bits (141), Expect = 1e-010
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +1 / +2
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ +E+ +I+E H++ GN+W+ IA LPGRTDN IKN WNS +++K
Sbjct: 128 FSPEEDRMIMEAHSMHGNKWATIARILPGRTDNAIKNHWNSTLRRK 265
Score = 30.3 bits (61), Expect = 5.9
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG A+ HL P
Sbjct: 249 EFQWFLIALSVRPGRIRAMVAHLLP 175
>gb|DR016135.1|DR016135 STRS1_7_H08.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_7_H08_A034 5', mRNA sequence
Length = 881
Score = 51.8 bits (109), Expect(2) = 3e-010
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +1 / +3
Query: 61 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
+RWS +A +LPGRT NEIKN WN+ + KKL
Sbjct: 159 HRWSLVAGRLPGRTGNEIKNYWNTHLSKKL 248
Score = 32.1 bits (65), Expect(2) = 3e-010
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +1 / +2
Query: 19 DEEDLIIELHAVLGNRWSQ 75
DE++LII LH +LGNR+++
Sbjct: 2 DEDELIIRLHRLLGNRYAE 58
Score = 31.2 bits (63), Expect = 3.1
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = -2 / -2
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHLF 60
SF L F FLISL V PGS A DHL+
Sbjct: 247 SFLLR*VFQ*FLISLPVRPGSRPATSDHLW 158
>gb|CF386912.1|CF386912 RTDR1_9_D07.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_9_D07_A015 5', mRNA
sequence
Length = 666
Score = 63.9 bits (136), Expect = 7e-010
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E+ I++ HA GN+W+ IA LPGRTDN IKN WNS ++++ R
Sbjct: 369 FTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNHWNSTLRRRCR 512
Score = 32.1 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 490 EFQWFLIALSVRPGRARAIVAHLLP 416
>gb|CF396127.1|CF396127 RTDS2_13_D06.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_13_D06_A021 5', mRNA sequence
Length = 801
Score = 63.9 bits (136), Expect = 7e-010
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +1 / -1
Query: 79 AAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 186
A +LPGRTDNEIKN WNS +K+KL G+DP TH+P
Sbjct: 801 AGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTHRP 694
Score = 44.2 bits (92), Expect = 3e-004
Identities = 20/33 (60%), Positives = 22/33 (66%)
Frame = -2 / +2
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPG 90
+G WV GS P +SF L EF FLISLSV PG
Sbjct: 692 NGRWVRGSTPMLMSFLLR*EFQ*FLISLSVRPG 790
Score = 33.0 bits (67), Expect = 0.87
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1 / +1
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIIS 100
KW +G GI+ + L+ RVP + DL++S
Sbjct: 691 KWTMGQGIDPHADEFSLEMRVPVVFDLVVS 780
>gb|CF663743.1|CF663743 RTCNT1_4_H05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_4_H05_A029 5', mRNA sequence
Length = 705
Score = 63.9 bits (136), Expect = 7e-010
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1 / +2
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E+ I++ HA GN+W+ IA LPGRTDN IKN WNS ++++ R
Sbjct: 41 FTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNHWNSTLRRRCR 184
Score = 32.1 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 162 EFQWFLIALSVRPGRARAIVAHLLP 88
>gb|CF669684.1|CF669684 RTCNT1_45_A07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_45_A07_A029 5', mRNA sequence
Length = 686
Score = 63.9 bits (136), Expect = 7e-010
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1 / +1
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E+ I++ HA GN+W+ IA LPGRTDN IKN WNS ++++ R
Sbjct: 367 FTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNHWNSTLRRRCR 510
Score = 32.1 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 488 EFQWFLIALSVRPGRARAIVAHLLP 414
>gb|CF672556.1|CF672556 RTCNT1_64_A03.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_64_A03_A029 5', mRNA sequence
Length = 253
Score = 63.9 bits (136), Expect = 7e-010
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E+ I++ HA GN+W+ IA LPGRTDN IKN WNS ++++ R
Sbjct: 93 FTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNHWNSTLRRRCR 236
Score = 32.1 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 214 EFQWFLIALSVRPGRARAIVAHLLP 140
>gb|CO364221.1|CO364221 RTK1_14_A05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_14_A05_A029 5', mRNA sequence
Length = 801
Score = 63.9 bits (136), Expect = 7e-010
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E+ I++ HA GN+W+ IA LPGRTDN IKN WNS ++++ R
Sbjct: 381 FTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNHWNSTLRRRCR 524
Score = 32.1 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 502 EFQWFLIALSVRPGRARAIVAHLLP 428
>gb|CO366361.1|CO366361 RTK1_27_A03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_27_A03_A029 5', mRNA sequence
Length = 842
Score = 63.9 bits (136), Expect = 7e-010
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1 / +1
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E+ I++ HA GN+W+ IA LPGRTDN IKN WNS ++++ R
Sbjct: 79 FTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNHWNSTLRRRCR 222
Score = 32.1 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 200 EFQWFLIALSVRPGRARAIVAHLLP 126
>gb|CV139163.1|CV139163 EST850372 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBC55 5' end, mRNA sequence
Length = 794
Score = 63.9 bits (136), Expect = 7e-010
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E+ I++ HA GN+W+ IA LPGRTDN IKN WNS ++++ R
Sbjct: 399 FTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNHWNSTLRRRCR 542
Score = 32.1 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 520 EFQWFLIALSVRPGRARAIVAHLLP 446
>gb|DR013838.1|DR013838 HEAT1_21_G09.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_21_G09_A029 5', mRNA sequence
Length = 813
Score = 63.9 bits (136), Expect = 7e-010
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E+ I++ HA GN+W+ IA LPGRTDN IKN WNS ++++ R
Sbjct: 381 FTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNHWNSTLRRRCR 524
Score = 32.1 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 502 EFQWFLIALSVRPGRARAIVAHLLP 428
>gb|DR024798.1|DR024798 STRS1_67_B12.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_67_B12_A034 5', mRNA sequence
Length = 812
Score = 63.9 bits (136), Expect = 7e-010
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1 / +2
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E+ I++ HA GN+W+ IA LPGRTDN IKN WNS ++++ R
Sbjct: 380 FTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNHWNSTLRRRCR 523
Score = 32.1 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 501 EFQWFLIALSVRPGRARAIVAHLLP 427
>gb|DR024941.1|DR024941 STRS1_68_B11.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_68_B11_A034 5', mRNA sequence
Length = 746
Score = 63.9 bits (136), Expect = 7e-010
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1 / +1
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E+ I++ HA GN+W+ IA LPGRTDN IKN WNS ++++ R
Sbjct: 376 FTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNHWNSTLRRRCR 519
Score = 32.1 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 497 EFQWFLIALSVRPGRARAIVAHLLP 423
>gb|DR050127.1|DR050127 RTBOR1_21_A09.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_21_A09_A029 5', mRNA sequence
Length = 867
Score = 63.9 bits (136), Expect = 7e-010
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1 / +2
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E+ I++ HA GN+W+ IA LPGRTDN IKN WNS ++++ R
Sbjct: 404 FTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNHWNSTLRRRCR 547
Score = 32.1 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 525 EFQWFLIALSVRPGRARAIVAHLLP 451
>gb|DR089099.1|DR089099 RTAL1_6_B11.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_6_B11_A029 5', mRNA sequence
Length = 809
Score = 63.9 bits (136), Expect = 7e-010
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1 / +2
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E+ I++ HA GN+W+ IA LPGRTDN IKN WNS ++++ R
Sbjct: 254 FTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNHWNSTLRRRCR 397
Score = 32.1 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 375 EFQWFLIALSVRPGRARAIVAHLLP 301
>gb|DT626587.1|DT626587 EST1158511 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAC43 5' end, mRNA sequence
Length = 738
Score = 63.9 bits (136), Expect = 7e-010
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E+ I++ HA GN+W+ IA LPGRTDN IKN WNS ++++ R
Sbjct: 399 FTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNHWNSTLRRRCR 542
Score = 32.1 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 520 EFQWFLIALSVRPGRARAIVAHLLP 446
>gb|DR096185.1|DR096185 STRR1_26_G11.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_26_G11_A033 3', mRNA sequence
Length = 729
Score = 63.5 bits (135), Expect = 9e-010
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +1 / +3
Query: 16 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 159
+DEEDLII LH +LG RWS IA ++PGRT EI+ W S ++ ++K
Sbjct: 222 EDEEDLIIRLHKLLGERWSLIAGRIPGRTPEEIEKYWKSRKQENSKRK 365
Score = 37.0 bits (76), Expect = 0.050
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -1 / -2
Query: 147 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVL 16
+ L +R+P +L+L+ N RPP+ + VQ +DE+FFVL
Sbjct: 353 IFLLSRLPVLLNLLWGSSRYSASNQRPPLSQQFVQPNDEIFFVL 222
>gb|CF470509.1|CF470509 RTDS1_13_H10.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_13_H10_A015 3', mRNA sequence
Length = 704
Score = 63.0 bits (134), Expect = 1e-009
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +1 / +2
Query: 49 AVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
A L NRW+QIA LPGRTD EIKN W+SC+KKK
Sbjct: 5 ARLNNRWAQIAKHLPGRTDTEIKNYWHSCLKKK 103
Score = 41.9 bits (87), Expect = 0.002
Identities = 18/29 (62%), Positives = 19/29 (65%)
Frame = -1 / -2
Query: 147 LLLDARVP*ILDLIISPPWQLRCNLRPPV 61
L L A VP ILD I P WQ+ CNL PPV
Sbjct: 103 LFLQAAVPVILDFSIRPSWQVFCNLCPPV 17
Score = 33.4 bits (68), Expect = 0.63
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2 / -3
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 63
+FF FLIS+SVLPG C AI HL
Sbjct: 105 AFFFRQLCQ*FLISVSVLPGKCFAICAHL 19
>gb|CF476017.1|CF476017 RTWW2_16_B11.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_16_B11_A021 5', mRNA sequence
Length = 625
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = +1 / +2
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E I++ HA GN+W+ IA LPGRTDN IKN WNS ++++ R
Sbjct: 2 FTPSEVAAILQAHAQHGNKWATIARALPGRTDNAIKNHWNSTLRRRCR 145
Score = 32.1 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 123 EFQWFLIALSVRPGRARAIVAHLLP 49
>gb|CN783895.1|CN783895 EST782586 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAE59 5' end, mRNA sequence
Length = 937
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +1
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ E+ II+ HA GN+W+ IA LPGRTDN IKN WNS ++++
Sbjct: 331 FSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNHWNSTLRRR 468
Score = 30.7 bits (62), Expect = 4.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 452 EFQWFLIALSVRPGRRRAIVAHLLP 378
>gb|CO411548.1|CO411548 EST841933 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALL67 5' end, mRNA sequence
Length = 731
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ E+ II+ HA GN+W+ IA LPGRTDN IKN WNS ++++
Sbjct: 324 FSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNHWNSTLRRR 461
Score = 30.7 bits (62), Expect = 4.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 445 EFQWFLIALSVRPGRRRAIVAHLLP 371
>gb|CO412408.1|CO412408 EST842793 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALW92 5' end, mRNA sequence
Length = 880
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ E+ II+ HA GN+W+ IA LPGRTDN IKN WNS ++++
Sbjct: 324 FSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNHWNSTLRRR 461
Score = 30.7 bits (62), Expect = 4.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 445 EFQWFLIALSVRPGRRRAIVAHLLP 371
>gb|CO414624.1|CO414624 EST845009 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMQ84 5' end, mRNA sequence
Length = 700
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ E+ II+ HA GN+W+ IA LPGRTDN IKN WNS ++++
Sbjct: 324 FSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNHWNSTLRRR 461
Score = 30.7 bits (62), Expect = 4.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 445 EFQWFLIALSVRPGRRRAIVAHLLP 371
>gb|CV135175.1|CV135175 EST846384 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PICM856 5' end, mRNA sequence
Length = 926
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ E+ II+ HA GN+W+ IA LPGRTDN IKN WNS ++++
Sbjct: 318 FSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNHWNSTLRRR 455
Score = 30.7 bits (62), Expect = 4.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 439 EFQWFLIALSVRPGRRRAIVAHLLP 365
>gb|CV136199.1|CV136199 EST847408 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIA840 5' end, mRNA sequence
Length = 874
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ E+ II+ HA GN+W+ IA LPGRTDN IKN WNS ++++
Sbjct: 318 FSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNHWNSTLRRR 455
Score = 30.7 bits (62), Expect = 4.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 439 EFQWFLIALSVRPGRRRAIVAHLLP 365
>gb|DN447482.1|DN447482 EST943281 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBT46 5' end, mRNA sequence
Length = 866
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ E+ II+ HA GN+W+ IA LPGRTDN IKN WNS ++++
Sbjct: 270 FSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNHWNSTLRRR 407
Score = 30.7 bits (62), Expect = 4.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 391 EFQWFLIALSVRPGRRRAIVAHLLP 317
>gb|DN452317.1|DN452317 EST948116 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIFD73 5' end, mRNA sequence
Length = 879
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +2
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ E+ II+ HA GN+W+ IA LPGRTDN IKN WNS ++++
Sbjct: 323 FSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNHWNSTLRRR 460
Score = 30.7 bits (62), Expect = 4.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 444 EFQWFLIALSVRPGRRRAIVAHLLP 370
>gb|DN455288.1|DN455288 EST951087 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGC65 5' end, mRNA sequence
Length = 932
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ E+ II+ HA GN+W+ IA LPGRTDN IKN WNS ++++
Sbjct: 324 FSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNHWNSTLRRR 461
Score = 30.7 bits (62), Expect = 4.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 445 EFQWFLIALSVRPGRRRAIVAHLLP 371
>gb|DN456471.1|DN456471 EST952270 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGP36 5' end, mRNA sequence
Length = 800
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ E+ II+ HA GN+W+ IA LPGRTDN IKN WNS ++++
Sbjct: 516 FSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNHWNSTLRRR 653
Score = 30.7 bits (62), Expect = 4.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 637 EFQWFLIALSVRPGRRRAIVAHLLP 563
>gb|DN458982.1|DN458982 EST954781 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIHH93 5' end, mRNA sequence
Length = 941
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ E+ II+ HA GN+W+ IA LPGRTDN IKN WNS ++++
Sbjct: 264 FSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNHWNSTLRRR 401
Score = 30.7 bits (62), Expect = 4.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 385 EFQWFLIALSVRPGRRRAIVAHLLP 311
>gb|DN463709.1|DN463709 EST959508 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJ226 5' end, mRNA sequence
Length = 914
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +1
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ E+ II+ HA GN+W+ IA LPGRTDN IKN WNS ++++
Sbjct: 322 FSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNHWNSTLRRR 459
Score = 30.7 bits (62), Expect = 4.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 443 EFQWFLIALSVRPGRRRAIVAHLLP 369
>gb|DN464734.1|DN464734 EST960533 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJF92 5' end, mRNA sequence
Length = 939
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +2
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ E+ II+ HA GN+W+ IA LPGRTDN IKN WNS ++++
Sbjct: 332 FSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNHWNSTLRRR 469
Score = 30.7 bits (62), Expect = 4.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 453 EFQWFLIALSVRPGRRRAIVAHLLP 379
>gb|DR099264.1|DR099264 STRR1_54_G08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_54_G08_A033 3', mRNA sequence
Length = 804
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +1 / +2
Query: 76 IAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 186
IA +LPGRTDNEIKN WNS +K+KL G+DP T +P
Sbjct: 2 IAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRRP 112
Score = 37.9 bits (78), Expect = 0.027
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = -2 / -1
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI 75
+G V GS P +SF EF FLISLSV PG AI
Sbjct: 114 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAI 1
Score = 31.6 bits (64), Expect = 2.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1 / -3
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIIS 100
KW G GI+ + L RVP + DL++S
Sbjct: 115 KWTTGQGIDPHADEFSLQMRVPVVFDLVVS 26
>gb|DT626735.1|DT626735 EST1159811 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAQ67 5' end, mRNA sequence
Length = 900
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ E+ II+ HA GN+W+ IA LPGRTDN IKN WNS ++++
Sbjct: 264 FSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNHWNSTLRRR 401
Score = 30.7 bits (62), Expect = 4.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 385 EFQWFLIALSVRPGRRRAIVAHLLP 311
Score = 30.3 bits (61), Expect = 8.7
Identities = 10/44 (22%), Positives = 23/44 (52%)
Frame = +1 / +3
Query: 67 WSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEA 198
WSQI+ ++PGR+ + W + + ++ + P+ + +A
Sbjct: 168 WSQISRRIPGRSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQA 299
>gb|DT627526.1|DT627526 EST1160602 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAZ54 5' end, mRNA sequence
Length = 635
Score = 62.1 bits (132), Expect = 2e-009
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 147
F+ E+ II+ HA GN+W+ IA LPGRTDN IKN WNS ++++
Sbjct: 81 FSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNHWNSTLRRR 218
Score = 30.7 bits (62), Expect = 4.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 202 EFQWFLIALSVRPGRRRAIVAHLLP 128
>gb|BX680071.1|BX680071 BX680071 RS Pinus pinaster cDNA clone RS38G07, mRNA sequence
Length = 676
Score = 61.7 bits (131), Expect = 3e-009
Identities = 23/51 (45%), Positives = 34/51 (66%)
Frame = +1 / +1
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 162
F +E+ +I+ HA GN+W+ IA L GRTDN IKN WNS ++++ + G
Sbjct: 7 FTPEEDAIIVRAHAQHGNKWATIARMLSGRTDNAIKNHWNSTLRRRCQGGG 159
Score = 32.1 bits (65), Expect = 1.6
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSVLP S AI HL P
Sbjct: 128 EFQWFLIALSVLPLSMRAIVAHLLP 54
>gb|DR011876.1|DR011876 HEAT1_8_B02.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_8_B02_A029 5', mRNA sequence
Length = 763
Score = 61.7 bits (131), Expect = 3e-009
Identities = 23/44 (52%), Positives = 32/44 (72%)
Frame = +1 / +1
Query: 22 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
E+ I++ HA GN+W+ IA LPGRTDN IKN WNS ++++ R
Sbjct: 10 EDAAILQAHAQHGNKWATIARALPGRTDNAIKNHWNSTLRRRCR 141
Score = 32.1 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSV PG AI HL P
Sbjct: 119 EFQWFLIALSVRPGRARAIVAHLLP 45
>gb|DR015213.1|DR015213 STRS1_2_D10.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_D10_A034 3', mRNA sequence
Length = 787
Score = 61.7 bits (131), Expect = 3e-009
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +1 / +3
Query: 79 AAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 186
A +LPGRTDNEIKN WNS +KKKL G+DP T +P
Sbjct: 3 AGRLPGRTDNEIKNYWNSHLKKKLISMGVDPLTRRP 110
Score = 38.8 bits (80), Expect = 0.014
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -2 / -1
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPG 90
+G V GS P +SFF EF FLISLSV PG
Sbjct: 112 NGRRVRGSTPMLMSFFFR*EFQ*FLISLSVRPG 14
Score = 32.5 bits (66), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1 / -3
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIIS 100
KW G GI+ + L RVP + DL++S
Sbjct: 113 KWTTGQGIDPHADEFFLQMRVPVVFDLVVS 24
>gb|DR101912.1|DR101912 STRR1_76_E01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_76_E01_A033 5', mRNA sequence
Length = 574
Score = 61.2 bits (130), Expect = 4e-009
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +1 / +1
Query: 94 GRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADH 204
GRTDNEIKN WN IK+KL KG+DP TH+PL + ++
Sbjct: 1 GRTDNEIKNYWNLHIKRKLLSKGLDPQTHRPLGQPNN 111
Score = 37.0 bits (76), Expect = 0.050
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = -2 / -3
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSV 99
SG WV GS P +F LM +F F ISLSV
Sbjct: 95 SGRWVWGSSPLLSNFLLMCKFQ*FFISLSV 6
Score = 33.0 bits (67), Expect = 0.87
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -1 / -2
Query: 204 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISP 97
++ L++W +G+G+ + Q D VP +L L++ P
Sbjct: 111 IVWLAEWTMGLGVESLAQQFSFDV*VPVVLYLVVRP 4
>gb|BX678005.1|BX678005 BX678005 RN Pinus pinaster cDNA clone RN55A12, mRNA sequence
Length = 423
Score = 60.3 bits (128), Expect = 8e-009
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +1 / +3
Query: 4 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTD 105
G F+ +EE IIELHAVLGN+WS IA LPGRTD
Sbjct: 321 GQFSYEEEQTIIELHAVLGNKWSTIAGHLPGRTD 422
Score = 42.4 bits (88), Expect = 0.001
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = -2 / -3
Query: 104 SVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 3
SVLPG C AI DHLFPRTA S+ N P
Sbjct: 421 SVLPGRCPAIVDHLFPRTAWSSIIVCSSSYENCP 320
>gb|CN783759.1|CN783759 EST782450 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAC68 5' end, mRNA sequence
Length = 872
Score = 60.3 bits (128), Expect = 8e-009
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1 / +1
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 162
F +E+ I+ HA GN+W+ IA L GRTDN IKN WNS ++++ + G
Sbjct: 319 FTPEEDATIVRAHAQHGNKWATIARMLSGRTDNAIKNHWNSTLRRRCQGGG 471
Score = 32.1 bits (65), Expect = 1.6
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSVLP S AI HL P
Sbjct: 440 EFQWFLIALSVLPLSMRAIVAHLLP 366
>gb|CV138259.1|CV138259 EST849468 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIB084 5' end, mRNA sequence
Length = 847
Score = 60.3 bits (128), Expect = 8e-009
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1 / +1
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 162
F +E+ I+ HA GN+W+ IA L GRTDN IKN WNS ++++ + G
Sbjct: 316 FTPEEDATIVRAHAQHGNKWATIARMLSGRTDNAIKNHWNSTLRRRCQGGG 468
Score = 32.1 bits (65), Expect = 1.6
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSVLP S AI HL P
Sbjct: 437 EFQWFLIALSVLPLSMRAIVAHLLP 363
>gb|DN448288.1|DN448288 EST944087 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIC315 5' end, mRNA sequence
Length = 967
Score = 60.3 bits (128), Expect = 8e-009
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 162
F +E+ I+ HA GN+W+ IA L GRTDN IKN WNS ++++ + G
Sbjct: 336 FTPEEDATIVRAHAQHGNKWATIARMLSGRTDNAIKNHWNSTLRRRCQGGG 488
Score = 32.1 bits (65), Expect = 1.6
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSVLP S AI HL P
Sbjct: 457 EFQWFLIALSVLPLSMRAIVAHLLP 383
>gb|DN463162.1|DN463162 EST958961 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIIV37 5' end, mRNA sequence
Length = 943
Score = 60.3 bits (128), Expect = 8e-009
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1 / +1
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 162
F +E+ I+ HA GN+W+ IA L GRTDN IKN WNS ++++ + G
Sbjct: 43 FTPEEDATIVRAHAQHGNKWATIARMLSGRTDNAIKNHWNSTLRRRCQGGG 195
Score = 32.1 bits (65), Expect = 1.6
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSVLP S AI HL P
Sbjct: 164 EFQWFLIALSVLPLSMRAIVAHLLP 90
>gb|DR014845.1|DR014845 HEAT1_52_A11.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_52_A11_A029 3', mRNA sequence
Length = 785
Score = 60.3 bits (128), Expect = 8e-009
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +1 / +1
Query: 79 AAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 186
A +LPGRTDNEIKN WNS +K+KL G+DP T +P
Sbjct: 1 AGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRRP 108
Score = 36.1 bits (74), Expect = 0.094
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = -2 / -1
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPG 90
+G V GS P +SF EF FLISLSV PG
Sbjct: 110 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPG 12
Score = 31.6 bits (64), Expect = 2.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1 / -3
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIIS 100
KW G GI+ + L RVP + DL++S
Sbjct: 111 KWTTGQGIDPHADEFSLQMRVPVVFDLVVS 22
>gb|DT625580.1|DT625580 EST1157504 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA149 5' end, mRNA sequence
Length = 889
Score = 60.3 bits (128), Expect = 8e-009
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1 / +1
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 162
F +E+ I+ HA GN+W+ IA L GRTDN IKN WNS ++++ + G
Sbjct: 319 FTPEEDATIVRAHAQHGNKWATIARMLSGRTDNAIKNHWNSTLRRRCQGGG 471
Score = 32.1 bits (65), Expect = 1.6
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSVLP S AI HL P
Sbjct: 440 EFQWFLIALSVLPLSMRAIVAHLLP 366
>gb|DT624539.1|DT624539 EST1158826 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAF82 5' end, mRNA sequence
Length = 754
Score = 60.3 bits (128), Expect = 8e-009
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1 / +3
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 162
F +E+ I+ HA GN+W+ IA L GRTDN IKN WNS ++++ + G
Sbjct: 336 FTPEEDATIVRAHAQHGNKWATIARMLSGRTDNAIKNHWNSTLRRRCQGGG 488
Score = 32.1 bits (65), Expect = 1.6
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 131 EFHRFLISLSVLPGSCAAI*DHLFP 57
EF FLI+LSVLP S AI HL P
Sbjct: 457 EFQWFLIALSVLPLSMRAIVAHLLP 383
>gb|BQ697390.1|BQ697390 NXPV_053_G01_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_053_G01 5' similar to Arabidopsis
thaliana sequence At1g09540 putative transcription
factor (MYB61) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 207
Score = 59.9 bits (127), Expect = 1e-008
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +1 / +2
Query: 124 WNSCIKKKLRQKGIDPNTHKPLTEAD 201
WNSCIKKKLRQ+GIDPNTH+PL+E +
Sbjct: 2 WNSCIKKKLRQRGIDPNTHRPLSEVN 79
Score = 46.0 bits (96), Expect = 9e-005
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / -1
Query: 194 SVSGLWVLGSMPFCLSFFLMHEF 126
S+ GL VLGSMP CLSFFLMHEF
Sbjct: 72 SLRGLCVLGSMPRCLSFFLMHEF 4
>gb|BQ701199.1|BQ701199 NXSI_023_G01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_023_G01 5' similar to Arabidopsis thaliana
sequence At5g67300 myb-related protein, 33.3K
(pir||S71284) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 497
Score = 59.0 bits (125), Expect = 2e-008
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +1 / +1
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E+ I++ HA GN+W+ IA LPGRTDN KN WNS + + R
Sbjct: 151 FTPSEDAAILQAHAQHGNKWATIARALPGRTDNAXKNHWNSTLXXRCR 294
>gb|CO165016.1|CO165016 FLD1_51_F09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_51_F09_A029 5', mRNA sequence
Length = 694
Score = 59.0 bits (125), Expect = 2e-008
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / +2
Query: 10 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 153
F E+ I++ HA GN+W+ IA LPGRTD IKN WNS ++++ R
Sbjct: 68 FTPAEDAAILQAHAQHGNQWATIARALPGRTDYAIKNHWNSTLRRRCR 211
>gb|CF392063.1|CF392063 RTDR3_12_C02.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_12_C02_A022 5', mRNA
sequence
Length = 760
Score = 53.1 bits (112), Expect(2) = 2e-008
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1 / +2
Query: 64 RWSQIAAQLPGRTDNEIKNLWNSCIKKKL 150
RWS+IA LPG+TDNEIKN W + IKK+L
Sbjct: 413 RWSRIAQNLPGKTDNEIKNYWRTRIKKRL 499
Score = 33.9 bits (69), Expect(2) = 0.049
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2 / -2
Query: 149 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 63
S FL+ FLISLSV PG A+ DHL
Sbjct: 498 SLFLIRVLQ*FLISLSVFPGKFCAMRDHL 412
Score = 24.0 bits (47), Expect(2) = 2e-008
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1 / +2
Query: 13 AQDEEDLIIELHAVLGNR 66
A EE LII+LH GNR
Sbjct: 305 APQEERLIIKLHRRWGNR 358
Score = 21.8 bits (42), Expect(2) = 0.049
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -1 / -1
Query: 66 PVPEDSVQLDDEVFFV 19
PVP +++ +D+ FF+
Sbjct: 358 PVPPTAMEFNDQTFFL 311
>gb|DR161362.1|DR161362 RTFE1_11_H03.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_11_H03_A029 3', mRNA sequence
Length = 778
Score = 58.5 bits (124), Expect = 3e-008
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1 / +1
Query: 85 QLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 186
+LPGRTDNEIKN WNS +K+KL G+DP T +P
Sbjct: 1 RLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRRP 102
Score = 36.1 bits (74), Expect = 0.094
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = -2 / -3
Query: 188 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPG 90
+G V GS P +SF EF FLISLSV PG
Sbjct: 104 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPG 6
Score = 31.6 bits (64), Expect = 2.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1 / -2
Query: 189 KWLVGVGINAFLPQLLLDARVP*ILDLIIS 100
KW G GI+ + L RVP + DL++S
Sbjct: 105 KWTTGQGIDPHADEFSLQMRVPVVFDLVVS 16
Database: Pinus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:25 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.311 0.129 0.382
Matrix: BLOSUM62
Number of Hits to DB: 262,225,916
Number of Sequences: 355925
Number of extensions: 3940532
Number of successful extensions: 55392
Number of sequences better than 10.0: 419
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 5677542320
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 0 ( 0.0 bits)
S1: 42 (21.8 bits)