TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBN21e06.xg.2.1
(704 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF470504.1|CF470504 RTDS1_13_D09.b1_A015 Drought-stresse... 252 2e-066
gb|CO165781.1|CO165781 FLD1_57_B08.b1_A029 Root flooded Pin... 252 2e-066
gb|CO200550.1|CO200550 GEO2_8_C12.b1_A032 Root gravitropism... 252 2e-066
gb|CO361124.1|CO361124 NDL2_2_H09.g1_A029 Needles control 2... 252 2e-066
gb|CO369603.1|CO369603 RTK1_48_F07.b1_A029 Roots minus pota... 252 2e-066
gb|DR120678.1|DR120678 RTMG1_31_F04.b1_A029 Roots minus mag... 252 2e-066
gb|BQ634357.1|BQ634357 NXRV067_H08_F NXRV (Nsf Xylem Root w... 246 1e-064
gb|CX713945.1|CX713945 RTPQ1_15_G12.b1_A032 Roots treated w... 244 4e-064
gb|CF672241.1|CF672241 RTCNT1_62_G02.b1_A029 Root control P... 243 7e-064
gb|CO165491.1|CO165491 FLD1_54_H04.g1_A029 Root flooded Pin... 243 7e-064
gb|CO166187.1|CO166187 FLD1_60_A12.b1_A029 Root flooded Pin... 243 7e-064
gb|CV034557.1|CV034557 RTNACL1_10_A06.b1_A029 Roots plus ad... 243 7e-064
gb|CV034621.1|CV034621 RTNACL1_10_A06.g1_A029 Roots plus ad... 243 7e-064
gb|CX648234.1|CX648234 COLD1_27_H06.b1_A029 Root cold Pinus... 243 7e-064
gb|CX648317.1|CX648317 COLD1_27_H06.g1_A029 Root cold Pinus... 243 7e-064
gb|DR013276.1|DR013276 HEAT1_18_G05.b1_A029 Root at 37 C fo... 243 7e-064
gb|DR056287.1|DR056287 RTCA1_29_F12.b1_A029 Roots minus cal... 243 7e-064
gb|DR742450.1|DR742450 RTCU1_4_D01.b1_A029 Roots plus added... 243 7e-064
gb|CO368668.1|CO368668 RTK1_42_C01.b1_A029 Roots minus pota... 242 3e-063
gb|CO368744.1|CO368744 RTK1_42_C01.g1_A029 Roots minus pota... 242 3e-063
gb|CF477415.1|CF477415 RTWW3_7_G07.g1_A022 Well-watered lob... 231 4e-060
gb|DR387675.1|DR387675 RTHG1_23_H11.b1_A029 Roots plus adde... 153 3e-059
gb|AI920150.1|AI920150 1680 Pine Lambda Zap Xylem library P... 186 3e-053
gb|DR056364.1|DR056364 RTCA1_29_F12.g1_A029 Roots minus cal... 203 1e-051
gb|CO169862.1|CO169862 NDL1_10_D06.b1_A029 Needles control ... 199 1e-050
gb|AW698003.1|AW698003 NXNV_079_D09_F Nsf Xylem Normal wood... 193 1e-048
gb|AW736869.1|AW736869 NXNV_083_H08_F Nsf Xylem Normal wood... 193 2e-048
gb|AA739773.1|AA739773 538 PtIFG2 Pinus taeda cDNA clone 88... 190 1e-047
gb|CO368658.1|CO368658 RTK1_42_B01.b1_A029 Roots minus pota... 190 1e-047
gb|CF476401.1|CF476401 RTWW3_1_A12.b1_A022 Well-watered lob... 180 8e-045
gb|CF672326.1|CF672326 RTCNT1_62_G02.g1_A029 Root control P... 153 2e-044
gb|CF478695.1|CF478695 RTWW3_16_A03.g1_A022 Well-watered lo... 179 2e-044
gb|DR090523.1|DR090523 RTAL1_15_D10.g1_A029 Roots plus adde... 175 3e-043
gb|DR168719.1|DR168719 RTPHOS1_27_H08.b1_A029 Roots minus p... 175 3e-043
gb|CF393159.1|CF393159 RTDR3_17_B10.g1_A022 Loblolly pine r... 169 2e-041
gb|CF393740.1|CF393740 RTDS2_1_A05.b1_A021 Drought-stressed... 161 4e-039
gb|BX249925.1|BX249925 BX249925 Pinus pinaster differenciat... 158 5e-038
gb|BE496570.1|BE496570 NXCI_020_G05_F NXCI (Nsf Xylem Compr... 155 2e-037
gb|BE810198.1|BE810198 NXCI_061_C04_F NXCI (Nsf Xylem Compr... 151 5e-036
gb|BF221274.1|BF221274 NXCI_156_G07_F NXCI (Nsf Xylem Compr... 149 1e-035
gb|BE520016.1|BE520016 NXCI_028_B08_F NXCI (Nsf Xylem Compr... 143 1e-033
gb|CO361058.1|CO361058 NDL2_2_H09.b1_A029 Needles control 2... 143 2e-033
gb|AW626638.1|AW626638 NXNV067G01 Nsf Xylem Normal wood Ver... 139 2e-032
gb|DR180707.1|DR180707 RTMNUT1_34_G11.b1_A029 Roots minus m... 129 2e-029
gb|CF477362.1|CF477362 RTWW3_7_G07.b1_A022 Well-watered lob... 77 4e-029
gb|CO164434.1|CO164434 FLD1_48_A12.b1_A029 Root flooded Pin... 127 6e-029
gb|BF220484.1|BF220484 NXCI_147_B05_F NXCI (Nsf Xylem Compr... 116 2e-025
gb|BX678846.1|BX678846 BX678846 RS Pinus pinaster cDNA clon... 114 6e-025
gb|BQ654722.1|BQ654722 NXRV084_G12_F NXRV (Nsf Xylem Root w... 113 2e-024
gb|BM902723.1|BM902723 NXLV_073_D01_F NXLV (Nsf Xylem Late ... 111 4e-024
gb|BQ696330.1|BQ696330 NXPV_040_B04_F NXPV (Nsf Xylem Plani... 110 1e-023
gb|CF391995.1|CF391995 RTDR3_12_D08.b1_A022 Loblolly pine r... 109 2e-023
gb|AI919971.1|AI919971 1501 Pine Lambda Zap Xylem library P... 89 8e-022
>gb|CF470504.1|CF470504 RTDS1_13_D09.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_13_D09_A015 3', mRNA sequence
Length = 649
Score = 252 bits (545), Expect = 2e-066
Identities = 94/157 (59%), Positives = 124/157 (78%)
Frame = +3 / +2
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEK 194
G +L G+PEA TL RW+CQSYR+HLG +L+ + + ESLL W H DA++CCS K
Sbjct: 2 GPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSL 181
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD++L+KI D+ GRK+ +++ ++M+QGYAYLPAGVC+S
Sbjct: 182 PVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVS 361
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR SY++A+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 362 SMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 472
Score = 133 bits (286), Expect = 9e-031
Identities = 76/157 (48%), Positives = 83/157 (52%)
Frame = -2 / -2
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QTKDQ A Q SS RTFQA A S*E P+ + HTPAGR A PC I S
Sbjct: 471 QTKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQK 292
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSP 125
P SS I S SC+AT+VVSNMS P KV TG KEQH AS W Q++ DS
Sbjct: 291 LLRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSL 112
Query: 124 A*SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCP 14
L S PK *L Q QR V+ASG P S P
Sbjct: 111 TSELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGP 1
>gb|CO165781.1|CO165781 FLD1_57_B08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_57_B08_A029 3', mRNA sequence
Length = 757
Score = 252 bits (545), Expect = 2e-066
Identities = 94/157 (59%), Positives = 124/157 (78%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEK 194
G +L G+PEA TL RW+CQSYR+HLG +L+ + + ESLL W H DA++CCS K
Sbjct: 130 GPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSL 309
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD++L+KI D+ GRK+ +++ ++M+QGYAYLPAGVC+S
Sbjct: 310 PVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVS 489
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR SY++A+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 490 SMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 600
Score = 133 bits (286), Expect = 9e-031
Identities = 76/157 (48%), Positives = 83/157 (52%)
Frame = -2 / -3
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QTKDQ A Q SS RTFQA A S*E P+ + HTPAGR A PC I S
Sbjct: 599 QTKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQK 420
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSP 125
P SS I S SC+AT+VVSNMS P KV TG KEQH AS W Q++ DS
Sbjct: 419 LLRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSL 240
Query: 124 A*SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCP 14
L S PK *L Q QR V+ASG P S P
Sbjct: 239 TSELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGP 129
>gb|CO200550.1|CO200550 GEO2_8_C12.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_8_C12_A032 3', mRNA sequence
Length = 833
Score = 252 bits (545), Expect = 2e-066
Identities = 94/157 (59%), Positives = 124/157 (78%)
Frame = +3 / +2
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEK 194
G +L G+PEA TL RW+CQSYR+HLG +L+ + + ESLL W H DA++CCS K
Sbjct: 116 GPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSL 295
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD++L+KI D+ GRK+ +++ ++M+QGYAYLPAGVC+S
Sbjct: 296 PVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVS 475
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR SY++A+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 476 SMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 586
Score = 133 bits (286), Expect = 9e-031
Identities = 76/157 (48%), Positives = 83/157 (52%)
Frame = -2 / -3
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QTKDQ A Q SS RTFQA A S*E P+ + HTPAGR A PC I S
Sbjct: 585 QTKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQK 406
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSP 125
P SS I S SC+AT+VVSNMS P KV TG KEQH AS W Q++ DS
Sbjct: 405 LLRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSL 226
Query: 124 A*SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCP 14
L S PK *L Q QR V+ASG P S P
Sbjct: 225 TSELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGP 115
>gb|CO361124.1|CO361124 NDL2_2_H09.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_2_H09_A029 5', mRNA sequence
Length = 826
Score = 252 bits (545), Expect = 2e-066
Identities = 94/157 (59%), Positives = 124/157 (78%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEK 194
G +L G+PEA TL RW+CQSYR+HLG +L+ + + ESLL W H DA++CCS K
Sbjct: 139 GPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSL 318
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD++L+KI D+ GRK+ +++ ++M+QGYAYLPAGVC+S
Sbjct: 319 PVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVS 498
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR SY++A+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 499 SMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 609
Score = 133 bits (286), Expect = 9e-031
Identities = 76/157 (48%), Positives = 83/157 (52%)
Frame = -2 / -3
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QTKDQ A Q SS RTFQA A S*E P+ + HTPAGR A PC I S
Sbjct: 608 QTKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQK 429
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSP 125
P SS I S SC+AT+VVSNMS P KV TG KEQH AS W Q++ DS
Sbjct: 428 LLRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSL 249
Query: 124 A*SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCP 14
L S PK *L Q QR V+ASG P S P
Sbjct: 248 TSELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGP 138
>gb|CO369603.1|CO369603 RTK1_48_F07.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_48_F07_A029 3', mRNA sequence
Length = 707
Score = 252 bits (545), Expect = 2e-066
Identities = 94/157 (59%), Positives = 124/157 (78%)
Frame = +3 / +2
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEK 194
G +L G+PEA TL RW+CQSYR+HLG +L+ + + ESLL W H DA++CCS K
Sbjct: 107 GPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSL 286
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD++L+KI D+ GRK+ +++ ++M+QGYAYLPAGVC+S
Sbjct: 287 PVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVS 466
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR SY++A+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 467 SMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 577
Score = 133 bits (286), Expect = 9e-031
Identities = 76/157 (48%), Positives = 83/157 (52%)
Frame = -2 / -3
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QTKDQ A Q SS RTFQA A S*E P+ + HTPAGR A PC I S
Sbjct: 576 QTKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQK 397
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSP 125
P SS I S SC+AT+VVSNMS P KV TG KEQH AS W Q++ DS
Sbjct: 396 LLRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSL 217
Query: 124 A*SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCP 14
L S PK *L Q QR V+ASG P S P
Sbjct: 216 TSELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGP 106
>gb|DR120678.1|DR120678 RTMG1_31_F04.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_31_F04_A029 3', mRNA sequence
Length = 782
Score = 252 bits (545), Expect = 2e-066
Identities = 94/157 (59%), Positives = 124/157 (78%)
Frame = +3 / -3
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEK 194
G +L G+PEA TL RW+CQSYR+HLG +L+ + + ESLL W H DA++CCS K
Sbjct: 711 GPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSL 532
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD++L+KI D+ GRK+ +++ ++M+QGYAYLPAGVC+S
Sbjct: 531 PVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVS 352
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR SY++A+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 351 SMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 241
Score = 133 bits (286), Expect = 9e-031
Identities = 76/157 (48%), Positives = 83/157 (52%)
Frame = -2 / +2
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QTKDQ A Q SS RTFQA A S*E P+ + HTPAGR A PC I S
Sbjct: 242 QTKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQK 421
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSP 125
P SS I S SC+AT+VVSNMS P KV TG KEQH AS W Q++ DS
Sbjct: 422 LLRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSL 601
Query: 124 A*SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCP 14
L S PK *L Q QR V+ASG P S P
Sbjct: 602 TSELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGP 712
>gb|BQ634357.1|BQ634357 NXRV067_H08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV067_H08 5' similar to Arabidopsis thaliana
sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 651
Score = 246 bits (532), Expect = 1e-064
Identities = 91/151 (60%), Positives = 120/151 (79%)
Frame = +3 / +2
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+P A TL RW+CQSYR+HLG +L+ + + ESLL W H DA++CCS K PVFTF
Sbjct: 11 GTPXALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPVFTFA 190
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++L+KI D+ GRK+ +++ ++M+QGYAYLPAGVC+S MGR
Sbjct: 191 NQAGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMGRPA 370
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SY++A+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 371 SYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 463
Score = 131 bits (280), Expect = 6e-030
Identities = 73/151 (48%), Positives = 80/151 (52%)
Frame = -2 / -1
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QTKDQ A Q SS RTFQA A S*E P+ + HTPAGR A PC I S
Sbjct: 462 QTKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQK 283
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSP 125
P SS I S SC+AT+VVSNMS P KV TG KEQH AS W Q++ DS
Sbjct: 282 LLRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSL 103
Query: 124 A*SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
L S PK *L Q QR V+A G P
Sbjct: 102 TSELGLRSSTPKWNL*L*QTQRARVSAXGVP 10
>gb|CX713945.1|CX713945 RTPQ1_15_G12.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_15_G12_A032 3', mRNA sequence
Length = 774
Score = 244 bits (528), Expect = 4e-064
Identities = 92/157 (58%), Positives = 123/157 (78%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEK 194
G +L G+PEA TL RWI QSYR HLG +L+ + + ES+L + W H D ++CCS+K
Sbjct: 94 GPRLPPGTPEALTLTRWIFQSYRMHLGLELIGDNSEPNESVLKLLWHHSDGIMCCSWKPL 273
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD++L+KI DE GRK L ++ ++M+QGYAYLP+G+C+S
Sbjct: 274 PVFTFANQAGLDMLETTLVALQDISLEKILDENGRKRLCSDFTQIMQQGYAYLPSGICIS 453
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR VSY++A+AWKVL ++ +HC+AF F+NWSFV*
Sbjct: 454 SMGRPVSYDRAIAWKVLNDEDVIHCIAFMFLNWSFV* 564
Score = 98.7 bits (209), Expect(2) = 2e-022
Identities = 55/118 (46%), Positives = 61/118 (51%)
Frame = -2 / -2
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
TKDQ KA Q SS TF A A S ET PI + H P GR A*PC I S S
Sbjct: 560 TKDQFKNMKAMQ*ITSSSLSTFHAIARSYETGLPILEMHIPEGR*A*PCCIICVKSEHSL 381
Query: 301 FLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDS 128
P SS I S SCRATKVVS++S+P V TG +EQH S W +DS
Sbjct: 380 LRPFSSSIFSNDISCRATKVVSSISSPA*FANVKTGNGFQEQHMIPSEWCHRSFNTDS 207
Score = 27.2 bits (53), Expect(2) = 2e-022
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2 / -2
Query: 100 SAPK*YR*LWQIQRTSVAASGEPEISFCP 14
S+P+ *L +IQR SV+ASG P S P
Sbjct: 179 SSPRCIL*L*KIQRVSVSASGVPGGSLGP 93
>gb|CF672241.1|CF672241 RTCNT1_62_G02.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_62_G02_A029 3', mRNA sequence
Length = 784
Score = 243 bits (526), Expect = 7e-064
Identities = 91/151 (60%), Positives = 117/151 (77%)
Frame = +3 / +2
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 125 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 304
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MGR
Sbjct: 305 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPA 484
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SY++A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 485 SYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 577
Score = 122 bits (261), Expect = 3e-027
Identities = 72/149 (48%), Positives = 79/149 (53%)
Frame = -2 / -2
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
KDQ K Q L SS RTFQA A S E PI +RH PAGR A*PC I S
Sbjct: 570 KDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLL 391
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA* 119
P SS ILS+ SC AT VVS+MS P V TG EQH AS W Q+ +DS A
Sbjct: 390 RPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLAS 211
Query: 118 SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S P *L QIQR V+ASG P
Sbjct: 210 QSARNRSTPMWSL*L*QIQRARVSASGVP 124
>gb|CO165491.1|CO165491 FLD1_54_H04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_54_H04_A029 5', mRNA sequence
Length = 815
Score = 243 bits (526), Expect = 7e-064
Identities = 91/151 (60%), Positives = 117/151 (77%)
Frame = +3 / -1
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 581 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 402
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MGR
Sbjct: 401 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPA 222
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SY++A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 221 SYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 129
Score = 122 bits (261), Expect = 3e-027
Identities = 72/149 (48%), Positives = 79/149 (53%)
Frame = -2 / +1
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
KDQ K Q L SS RTFQA A S E PI +RH PAGR A*PC I S
Sbjct: 136 KDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLL 315
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA* 119
P SS ILS+ SC AT VVS+MS P V TG EQH AS W Q+ +DS A
Sbjct: 316 RPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLAS 495
Query: 118 SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S P *L QIQR V+ASG P
Sbjct: 496 QSARNRSTPMWSL*L*QIQRARVSASGVP 582
>gb|CO166187.1|CO166187 FLD1_60_A12.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_60_A12_A029 3', mRNA sequence
Length = 751
Score = 243 bits (526), Expect = 7e-064
Identities = 91/151 (60%), Positives = 117/151 (77%)
Frame = +3 / +2
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 92 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 271
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MGR
Sbjct: 272 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPA 451
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SY++A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 452 SYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 544
Score = 122 bits (261), Expect = 3e-027
Identities = 72/149 (48%), Positives = 79/149 (53%)
Frame = -2 / -2
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
KDQ K Q L SS RTFQA A S E PI +RH PAGR A*PC I S
Sbjct: 537 KDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLL 358
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA* 119
P SS ILS+ SC AT VVS+MS P V TG EQH AS W Q+ +DS A
Sbjct: 357 RPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLAS 178
Query: 118 SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S P *L QIQR V+ASG P
Sbjct: 177 QSARNRSTPMWSL*L*QIQRARVSASGVP 91
>gb|CV034557.1|CV034557 RTNACL1_10_A06.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_10_A06_A029 3', mRNA sequence
Length = 813
Score = 243 bits (526), Expect = 7e-064
Identities = 91/151 (60%), Positives = 117/151 (77%)
Frame = +3 / +3
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 156 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 335
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MGR
Sbjct: 336 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPA 515
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SY++A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 516 SYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 608
Score = 122 bits (261), Expect = 3e-027
Identities = 72/149 (48%), Positives = 79/149 (53%)
Frame = -2 / -3
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
KDQ K Q L SS RTFQA A S E PI +RH PAGR A*PC I S
Sbjct: 601 KDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLL 422
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA* 119
P SS ILS+ SC AT VVS+MS P V TG EQH AS W Q+ +DS A
Sbjct: 421 RPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLAS 242
Query: 118 SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S P *L QIQR V+ASG P
Sbjct: 241 QSARNRSTPMWSL*L*QIQRARVSASGVP 155
>gb|CV034621.1|CV034621 RTNACL1_10_A06.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_10_A06_A029 5', mRNA sequence
Length = 731
Score = 243 bits (526), Expect = 7e-064
Identities = 91/151 (60%), Positives = 117/151 (77%)
Frame = +3 / +3
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 132 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 311
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MGR
Sbjct: 312 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPA 491
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SY++A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 492 SYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 584
Score = 122 bits (261), Expect = 3e-027
Identities = 72/149 (48%), Positives = 79/149 (53%)
Frame = -2 / -2
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
KDQ K Q L SS RTFQA A S E PI +RH PAGR A*PC I S
Sbjct: 577 KDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLL 398
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA* 119
P SS ILS+ SC AT VVS+MS P V TG EQH AS W Q+ +DS A
Sbjct: 397 RPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLAS 218
Query: 118 SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S P *L QIQR V+ASG P
Sbjct: 217 QSARNRSTPMWSL*L*QIQRARVSASGVP 131
>gb|CX648234.1|CX648234 COLD1_27_H06.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_27_H06_A029 3', mRNA sequence
Length = 802
Score = 243 bits (526), Expect = 7e-064
Identities = 91/151 (60%), Positives = 117/151 (77%)
Frame = +3 / -1
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 469 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 290
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MGR
Sbjct: 289 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPA 110
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SY++A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 109 SYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 17
Score = 122 bits (261), Expect = 3e-027
Identities = 72/149 (48%), Positives = 79/149 (53%)
Frame = -2 / +3
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
KDQ K Q L SS RTFQA A S E PI +RH PAGR A*PC I S
Sbjct: 24 KDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLL 203
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA* 119
P SS ILS+ SC AT VVS+MS P V TG EQH AS W Q+ +DS A
Sbjct: 204 RPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLAS 383
Query: 118 SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S P *L QIQR V+ASG P
Sbjct: 384 QSARNRSTPMWSL*L*QIQRARVSASGVP 470
>gb|CX648317.1|CX648317 COLD1_27_H06.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_27_H06_A029 5', mRNA sequence
Length = 809
Score = 243 bits (526), Expect = 7e-064
Identities = 91/151 (60%), Positives = 117/151 (77%)
Frame = +3 / -2
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 637 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 458
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MGR
Sbjct: 457 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPA 278
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SY++A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 277 SYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 185
Score = 122 bits (261), Expect = 3e-027
Identities = 72/149 (48%), Positives = 79/149 (53%)
Frame = -2 / +3
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
KDQ K Q L SS RTFQA A S E PI +RH PAGR A*PC I S
Sbjct: 192 KDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLL 371
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA* 119
P SS ILS+ SC AT VVS+MS P V TG EQH AS W Q+ +DS A
Sbjct: 372 RPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLAS 551
Query: 118 SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S P *L QIQR V+ASG P
Sbjct: 552 QSARNRSTPMWSL*L*QIQRARVSASGVP 638
>gb|DR013276.1|DR013276 HEAT1_18_G05.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_18_G05_A029 3', mRNA sequence
Length = 678
Score = 243 bits (526), Expect = 7e-064
Identities = 91/151 (60%), Positives = 117/151 (77%)
Frame = +3 / +1
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 31 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 210
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MGR
Sbjct: 211 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPA 390
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SY++A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 391 SYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 483
Score = 122 bits (261), Expect = 3e-027
Identities = 72/149 (48%), Positives = 79/149 (53%)
Frame = -2 / -2
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
KDQ K Q L SS RTFQA A S E PI +RH PAGR A*PC I S
Sbjct: 476 KDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLL 297
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA* 119
P SS ILS+ SC AT VVS+MS P V TG EQH AS W Q+ +DS A
Sbjct: 296 RPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLAS 117
Query: 118 SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S P *L QIQR V+ASG P
Sbjct: 116 QSARNRSTPMWSL*L*QIQRARVSASGVP 30
>gb|DR056287.1|DR056287 RTCA1_29_F12.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_29_F12_A029 3', mRNA sequence
Length = 782
Score = 243 bits (526), Expect = 7e-064
Identities = 91/151 (60%), Positives = 117/151 (77%)
Frame = +3 / +1
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 124 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 303
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MGR
Sbjct: 304 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPA 483
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SY++A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 484 SYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 576
Score = 122 bits (261), Expect = 3e-027
Identities = 72/149 (48%), Positives = 79/149 (53%)
Frame = -2 / -1
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
KDQ K Q L SS RTFQA A S E PI +RH PAGR A*PC I S
Sbjct: 569 KDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLL 390
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA* 119
P SS ILS+ SC AT VVS+MS P V TG EQH AS W Q+ +DS A
Sbjct: 389 RPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLAS 210
Query: 118 SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S P *L QIQR V+ASG P
Sbjct: 209 QSARNRSTPMWSL*L*QIQRARVSASGVP 123
>gb|DR742450.1|DR742450 RTCU1_4_D01.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_4_D01_A029 3', mRNA sequence
Length = 702
Score = 243 bits (526), Expect = 7e-064
Identities = 91/151 (60%), Positives = 117/151 (77%)
Frame = +3 / -1
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 576 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 397
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MGR
Sbjct: 396 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPA 217
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SY++A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 216 SYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 124
Score = 122 bits (261), Expect = 3e-027
Identities = 72/149 (48%), Positives = 79/149 (53%)
Frame = -2 / +2
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
KDQ K Q L SS RTFQA A S E PI +RH PAGR A*PC I S
Sbjct: 131 KDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLL 310
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA* 119
P SS ILS+ SC AT VVS+MS P V TG EQH AS W Q+ +DS A
Sbjct: 311 RPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLAS 490
Query: 118 SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S P *L QIQR V+ASG P
Sbjct: 491 QSARNRSTPMWSL*L*QIQRARVSASGVP 577
>gb|CO368668.1|CO368668 RTK1_42_C01.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_42_C01_A029 3', mRNA sequence
Length = 784
Score = 242 bits (522), Expect = 3e-063
Identities = 90/151 (59%), Positives = 116/151 (76%)
Frame = +3 / +2
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 125 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 304
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETT VALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MGR
Sbjct: 305 NQAGLDMLETTFVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPA 484
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SY++A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 485 SYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 577
Score = 122 bits (261), Expect = 3e-027
Identities = 72/149 (48%), Positives = 79/149 (53%)
Frame = -2 / -2
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
KDQ K Q L SS RTFQA A S E PI +RH PAGR A*PC I S
Sbjct: 570 KDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLL 391
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA* 119
P SS ILS+ SC AT VVS+MS P V TG EQH AS W Q+ +DS A
Sbjct: 390 RPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLAS 211
Query: 118 SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S P *L QIQR V+ASG P
Sbjct: 210 QSARNRSTPMWSL*L*QIQRARVSASGVP 124
>gb|CO368744.1|CO368744 RTK1_42_C01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_42_C01_A029 5', mRNA sequence
Length = 758
Score = 242 bits (522), Expect = 3e-063
Identities = 90/151 (59%), Positives = 116/151 (76%)
Frame = +3 / +1
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 118 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 297
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETT VALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MGR
Sbjct: 298 NQAGLDMLETTFVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPA 477
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SY++A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 478 SYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 570
Score = 122 bits (261), Expect = 3e-027
Identities = 72/149 (48%), Positives = 79/149 (53%)
Frame = -2 / -1
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
KDQ K Q L SS RTFQA A S E PI +RH PAGR A*PC I S
Sbjct: 563 KDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLL 384
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA* 119
P SS ILS+ SC AT VVS+MS P V TG EQH AS W Q+ +DS A
Sbjct: 383 RPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLAS 204
Query: 118 SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S P *L QIQR V+ASG P
Sbjct: 203 QSARNRSTPMWSL*L*QIQRARVSASGVP 117
>gb|CF477415.1|CF477415 RTWW3_7_G07.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_7_G07_A022 5', mRNA sequence
Length = 752
Score = 231 bits (499), Expect = 4e-060
Identities = 86/146 (58%), Positives = 111/146 (76%)
Frame = +3 / +1
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 313 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 492
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MGR
Sbjct: 493 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPA 672
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVN 470
SY++ +AWKVL ++ + HC+ F F+N
Sbjct: 673 SYDRVIAWKVLNDEDSTHCIVFMFMN 750
Score = 115 bits (246), Expect = 3e-025
Identities = 69/147 (46%), Positives = 76/147 (51%)
Frame = -2 / -1
Query: 472 QLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAFLP 293
Q K Q L SS RTFQA S E PI +RH PAGR A*PC I S P
Sbjct: 752 QFINMKTMQWVLSSSFRTFQAITRSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLLRP 573
Query: 292 GSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA*SE 113
SS ILS+ SC AT VVS+MS P V TG EQH AS W Q+ +DS A
Sbjct: 572 FSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLASQS 393
Query: 112 WLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S P *L QIQR V+ASG P
Sbjct: 392 ARNRSTPMWSL*L*QIQRARVSASGVP 312
>gb|DR387675.1|DR387675 RTHG1_23_H11.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_23_H11_A029 3', mRNA sequence
Length = 760
Score = 153 bits (329), Expect(2) = 3e-059
Identities = 60/102 (58%), Positives = 74/102 (72%)
Frame = +3 / +3
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 102 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 281
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
NQ G+DMLETTLVALQD++LDKI DE GRK+ + +L +
Sbjct: 282 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQLFNR 407
Score = 95.5 bits (202), Expect(2) = 3e-059
Identities = 32/53 (60%), Positives = 45/53 (84%)
Frame = +3 / +2
Query: 327 LMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
+++QGYAYLPAG+CLS MGR SY++A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 395 IIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 553
Score = 75.8 bits (159), Expect(2) = 3e-024
Identities = 42/88 (47%), Positives = 48/88 (54%)
Frame = -2 / -1
Query: 295 PGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA*S 116
P SS ILS+ SC AT VVS+MS P V TG EQH AS W Q+ +DS A
Sbjct: 364 PFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLASQ 185
Query: 115 EWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S P *L QIQR V+ASG P
Sbjct: 184 SARNRSTPMWSL*L*QIQRARVSASGVP 101
Score = 56.1 bits (116), Expect(2) = 3e-024
Identities = 28/48 (58%), Positives = 29/48 (60%)
Frame = -2 / -2
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PC 335
KDQ K Q L SS RTFQA A S E PI +RH PAGR A*PC
Sbjct: 546 KDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC 403
>gb|AI920150.1|AI920150 1680 Pine Lambda Zap Xylem library Pinus taeda cDNA clone
g3_PL2CSUH, mRNA sequence
Length = 680
Score = 186 bits (400), Expect(2) = 3e-053
Identities = 69/110 (62%), Positives = 92/110 (83%)
Frame = +3 / +3
Query: 156 HQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLME 335
H D ++CCS+K PVFTF NQ G+DMLETTLVALQD++L+KI DE GRK L ++ ++M+
Sbjct: 162 HSDGIMCCSWKPLPVFTFANQAGLDMLETTLVALQDISLEKILDENGRKRLCSDFTQIMQ 341
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
QGYAYLP+G+C+S MGR VSY++A+AWKVL ++ +HC+AF F+NWSFV*
Sbjct: 342 QGYAYLPSGICISSMGRPVSYDRAIAWKVLNDEDVIHCIAFMFLNWSFV* 491
Score = 42.8 bits (87), Expect(2) = 3e-053
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3 / +3
Query: 21 KLISGSPEAATLVRWICQSYRYHLGADL 104
K S +P+A TL RWI QSYR HLG +L
Sbjct: 27 KXXSWTPKALTLTRWIFQSYRMHLGLEL 110
>gb|DR056364.1|DR056364 RTCA1_29_F12.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_29_F12_A029 5', mRNA sequence
Length = 638
Score = 203 bits (438), Expect = 1e-051
Identities = 78/127 (61%), Positives = 98/127 (77%)
Frame = +3 / +2
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 257 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 436
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MGR
Sbjct: 437 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPA 616
Query: 393 SYEQAVA 413
SY++A+A
Sbjct: 617 SYDRAIA 637
>gb|CO169862.1|CO169862 NDL1_10_D06.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_10_D06_A029 3', mRNA sequence
Length = 544
Score = 199 bits (430), Expect = 1e-050
Identities = 75/119 (63%), Positives = 97/119 (81%)
Frame = +3 / +3
Query: 129 ESLLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKAL 308
ESLL W H DA++CCS K PVFTF NQ G+DMLETTLVALQD++L+KI D+ GRK+
Sbjct: 9 ESLLKTLWHHSDAIMCCSLKSLPVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKSF 188
Query: 309 HAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
+++ ++M+QGYAYLPAGVC+S MGR SY++A+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 189 CSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 365
Score = 116 bits (247), Expect = 2e-025
Identities = 60/119 (50%), Positives = 66/119 (55%)
Frame = -2 / -1
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QTKDQ A Q SS RTFQA A S*E P+ + HTPAGR A PC I S
Sbjct: 364 QTKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQK 185
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDS 128
P SS I S SC+AT+VVSNMS P KV TG KEQH AS W Q++ DS
Sbjct: 184 LLRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDS 8
>gb|AW698003.1|AW698003 NXNV_079_D09_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_079_D09 5' similar to Arabidopsis thaliana
sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 394
Score = 193 bits (416), Expect = 1e-048
Identities = 71/122 (58%), Positives = 95/122 (77%)
Frame = +3 / +3
Query: 120 QAGESLLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGR 299
+A ES+L + W H DA++CCS K PVFTF NQ G+DMLETTLVALQD++LDKI DE GR
Sbjct: 21 EASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGR 200
Query: 300 KALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSF 479
K+ + ++++QGYAYLPAG+CLS MGR SY++A+AW L ++ + HC+ F F+NWSF
Sbjct: 201 KSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWXXLNDEDSTHCIVFMFMNWSF 380
Query: 480 V* 485
+*
Sbjct: 381 M* 386
Score = 102 bits (218), Expect = 2e-021
Identities = 58/119 (48%), Positives = 63/119 (52%)
Frame = -2 / -1
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
KDQ K Q L SS R FQA A S E PI +RH PAGR A*PC I S
Sbjct: 379 KDQFINMKTMQWVLSSSFRXFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLL 200
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA 122
P SS ILS+ SC AT VVS+MS P V TG EQH AS W Q+ +DS A
Sbjct: 199 RPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLA 23
>gb|AW736869.1|AW736869 NXNV_083_H08_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_083_H08 5' similar to Arabidopsis thaliana
sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 389
Score = 193 bits (415), Expect = 2e-048
Identities = 74/122 (60%), Positives = 91/122 (74%)
Frame = +3 / +2
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 17 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 196
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MG
Sbjct: 197 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGXXA 376
Query: 393 SY 398
Y
Sbjct: 377 XY 382
>gb|AA739773.1|AA739773 538 PtIFG2 Pinus taeda cDNA clone 8871M 3', mRNA sequence
Length = 663
Score = 190 bits (409), Expect = 1e-047
Identities = 72/122 (59%), Positives = 95/122 (77%)
Frame = +3 / +2
Query: 120 QAGESLLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGR 299
+ E L W H DA++C S K PVFTF NQ G+DMLETTLVALQD++L+KI D+ GR
Sbjct: 113 EVNEFXLKTLWHHSDAIMCXSLKSLPVFTFXNQAGLDMLETTLVALQDISLEKILDDNGR 292
Query: 300 KALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSF 479
K+ +++ ++M+QGYAYLPAGVC+S MGR SY++A+AWKVL ++ N HC+AF F+NWSF
Sbjct: 293 KSFCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSF 472
Query: 480 V* 485
V*
Sbjct: 473 V* 478
Score = 111 bits (236), Expect = 7e-024
Identities = 58/119 (48%), Positives = 65/119 (54%)
Frame = -2 / -1
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QTKDQ A Q SS RTFQA A S*E P+ + HTPAGR A PC I S
Sbjct: 477 QTKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQK 298
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDS 128
P SS I S SC+AT+VVSNMS P KV TG K QH AS W Q++ +S
Sbjct: 297 LLRPLSSSIFSNDISCKATRVVSNMSRPA*FXKVKTGNDFKXQHMMASEWCQSVFSXNS 121
>gb|CO368658.1|CO368658 RTK1_42_B01.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_42_B01_A029 3', mRNA sequence
Length = 558
Score = 190 bits (409), Expect = 1e-047
Identities = 70/122 (57%), Positives = 94/122 (77%)
Frame = +3 / +1
Query: 120 QAGESLLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGR 299
+A ES+L + W H DA++CC K PVFTF NQ G+DMLETT VALQD++LDKI DE GR
Sbjct: 4 EASESVLKLLWHHSDAIMCCFVKSLPVFTFANQAGLDMLETTFVALQDISLDKILDENGR 183
Query: 300 KALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSF 479
K+ + ++++QGYAYLPAG+CLS MGR SY++A+AWKVL ++ + C+ F F+NWSF
Sbjct: 184 KSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTQCIVFMFMNWSF 363
Query: 480 V* 485
+*
Sbjct: 364 M* 369
Score = 101 bits (215), Expect = 6e-021
Identities = 57/119 (47%), Positives = 64/119 (53%)
Frame = -2 / -2
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
KDQ K L SS RTFQA A S E PI +RH PAGR A*PC I S
Sbjct: 362 KDQFINMKTMHWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLL 183
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA 122
P SS+ILS+ SC AT VVS+MS P V TG +QH AS W Q+ +DS A
Sbjct: 182 RPFSSKILSKDISCNATNVVSSMSNPA*FANVKTGNDFTKQHMIASEWCQSSFSTDSLA 6
>gb|CF476401.1|CF476401 RTWW3_1_A12.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_1_A12_A022 3', mRNA sequence
Length = 537
Score = 180 bits (388), Expect = 8e-045
Identities = 67/110 (60%), Positives = 88/110 (80%)
Frame = +3 / +1
Query: 156 HQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLME 335
H DA++CCS K PVFTF NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++
Sbjct: 1 HSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQ 180
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
QGYAYLPAG+CLS MGR SY++A+AWKVL ++ + HC+ F F+NWS +*
Sbjct: 181 QGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFRFMNWSLM* 330
>gb|CF672326.1|CF672326 RTCNT1_62_G02.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_62_G02_A029 5', mRNA sequence
Length = 787
Score = 153 bits (329), Expect(2) = 2e-044
Identities = 61/102 (59%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 424 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 603
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
NQ G+DMLETTLVALQD++LDKI DE GRK+ + KL +
Sbjct: 604 NQAGLDMLETTLVALQDISLDKILDENGRKSFSQIMVKLFNR 729
Score = 46.0 bits (94), Expect(2) = 2e-044
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3 / +3
Query: 324 KLMEQGYAYLPAGVCLSGMGRHVS 395
++++QGYAYLPAG+CLS MGR S
Sbjct: 714 QIIQQGYAYLPAGICLSSMGRPAS 785
>gb|CF478695.1|CF478695 RTWW3_16_A03.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_16_A03_A022 5', mRNA sequence
Length = 733
Score = 179 bits (385), Expect = 2e-044
Identities = 67/115 (58%), Positives = 89/115 (77%)
Frame = +3 / +3
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEK 194
G +L G+PEA TL RW+CQSYR+HLG +L+ + + ESLL W H DA++CCS K
Sbjct: 387 GPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSL 566
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPA 359
PVFTF NQ G+DMLETTLVALQD++L+KI D+ GRK+ +++ ++M+QGYAYLPA
Sbjct: 567 PVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPA 731
>gb|DR090523.1|DR090523 RTAL1_15_D10.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_15_D10_A029 5', mRNA sequence
Length = 762
Score = 175 bits (377), Expect = 3e-043
Identities = 72/158 (45%), Positives = 100/158 (63%)
Frame = +3 / +2
Query: 6 NTAGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSF 185
+T G + +SG+ E LV+ I SYR + G DL+ E L M W H DA++CC+
Sbjct: 122 STLGLRNLSGTTEVLALVQRIVGSYRINFGMDLLRKQPSNDEELFKMVWHHSDALICCTC 301
Query: 186 KEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGV 365
K P F F N+ +DMLETT L DL D+ DE +K +++ K+M+QG+AYLPAG+
Sbjct: 302 KSLPEFIFANEAALDMLETTSGGLHDLRWDQTLDETEKKNAYSDFTKVMQQGFAYLPAGI 481
Query: 366 CLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSF 479
LS MGR V+YE+A+AW V ++ + C+AF FVNWSF
Sbjct: 482 RLSSMGRPVAYERAMAWSVANDNERMPCVAFMFVNWSF 595
Score = 109 bits (233), Expect = 2e-023
Identities = 66/156 (42%), Positives = 81/156 (51%)
Frame = -2 / -1
Query: 475 DQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAFL 296
DQLT KA L S T A A S* T RPI +R PAGRYA PC I+ S + F
Sbjct: 591 DQLTNMKATHGILSLSLATLHAIALS*ATGRPILERRIPAGRYANPCCITLVKSE*AFFF 412
Query: 295 PGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA*S 116
SS + S +RSC+ VVS++S +N+G L QH AS W Q I+KS S
Sbjct: 411 SVSSRV*SHLRSCKPPDVVSSISKAASFANMNSGNDLHVQHIRASEWCQTILKSSSSFEG 232
Query: 115 EWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCPAV 8
+L +S PK *L I+ TS S PE P+V
Sbjct: 231 CFLKRSIPKFIL*LPTIRWTSARTSVVPERFLKPSV 124
>gb|DR168719.1|DR168719 RTPHOS1_27_H08.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_27_H08_A029 3', mRNA sequence
Length = 713
Score = 175 bits (377), Expect = 3e-043
Identities = 72/158 (45%), Positives = 100/158 (63%)
Frame = +3 / +1
Query: 6 NTAGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSF 185
+T G + +SG+ E LV+ I SYR + G DL+ E L M W H DA++CC+
Sbjct: 40 STLGLRNLSGTTEVLALVQRIVGSYRINFGMDLLRKQPSNDEELFKMVWHHSDALICCTC 219
Query: 186 KEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGV 365
K P F F N+ +DMLETT L DL D+ DE +K +++ K+M+QG+AYLPAG+
Sbjct: 220 KSLPEFIFANEAALDMLETTSGGLHDLRWDQTLDETEKKNAYSDFTKVMQQGFAYLPAGI 399
Query: 366 CLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSF 479
LS MGR V+YE+A+AW V ++ + C+AF FVNWSF
Sbjct: 400 RLSSMGRPVAYERAMAWSVANDNERMPCVAFMFVNWSF 513
Score = 109 bits (233), Expect = 2e-023
Identities = 66/156 (42%), Positives = 81/156 (51%)
Frame = -2 / -1
Query: 475 DQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAFL 296
DQLT KA L S T A A S* T RPI +R PAGRYA PC I+ S + F
Sbjct: 509 DQLTNMKATHGILSLSLATLHAIALS*ATGRPILERRIPAGRYANPCCITLVKSE*AFFF 330
Query: 295 PGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA*S 116
SS + S +RSC+ VVS++S +N+G L QH AS W Q I+KS S
Sbjct: 329 SVSSRV*SHLRSCKPPDVVSSISKAASFANMNSGNDLHVQHIRASEWCQTILKSSSSFEG 150
Query: 115 EWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCPAV 8
+L +S PK *L I+ TS S PE P+V
Sbjct: 149 CFLKRSIPKFIL*LPTIRWTSARTSVVPERFLKPSV 42
>gb|CF393159.1|CF393159 RTDR3_17_B10.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_17_B10_A022 5', mRNA
sequence
Length = 710
Score = 169 bits (363), Expect = 2e-041
Identities = 63/111 (56%), Positives = 85/111 (76%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEK 194
G +L G+PEA TL RW+CQSYR+HLG +L+ + + ESLL W H DA++CCS K
Sbjct: 376 GPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSL 555
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYA 347
PVFTF NQ G+DMLETTLVALQD++L+KI D+ GRK+ +++ ++M+QGYA
Sbjct: 556 PVFTFANQAGLDMLETTLVALQDISLEKILDDXGRKSFCSDIAQIMQQGYA 708
>gb|CF393740.1|CF393740 RTDS2_1_A05.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_1_A05_A021 3', mRNA sequence
Length = 573
Score = 161 bits (347), Expect = 4e-039
Identities = 61/100 (61%), Positives = 81/100 (81%)
Frame = +3 / +2
Query: 186 KEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGV 365
K PVFTF NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPAG+
Sbjct: 2 KSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGI 181
Query: 366 CLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
CLS MGR S+++A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 182 CLSSMGRPASHDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 301
>gb|BX249925.1|BX249925 BX249925 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP030D04, mRNA sequence
Length = 681
Score = 158 bits (339), Expect = 5e-038
Identities = 61/103 (59%), Positives = 77/103 (74%)
Frame = +3 / +3
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 372 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKALPVFTFA 551
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQG 341
NQ G+DMLETTLVALQD++LDKI DE GRK+ + ++++QG
Sbjct: 552 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQG 680
>gb|BE496570.1|BE496570 NXCI_020_G05_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_020_G05 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 461
Score = 155 bits (334), Expect = 2e-037
Identities = 59/94 (62%), Positives = 79/94 (84%)
Frame = +3 / +3
Query: 204 TFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMG 383
TF N G+DMLETTLVALQD++L+KI D+ GRK+ +++ ++M+QGYAYLPAGVC+S MG
Sbjct: 3 TFANXXGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMG 182
Query: 384 RHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
R SY++A+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 183 RPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 284
>gb|BE810198.1|BE810198 NXCI_061_C04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_061_C04 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 372
Score = 151 bits (324), Expect = 5e-036
Identities = 59/107 (55%), Positives = 75/107 (70%)
Frame = +3 / +3
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 51 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 230
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYL 353
NQ +DMLETTLVALQD++ DKI D RK+ + ++++ YAYL
Sbjct: 231 NQAXLDMLETTLVALQDISXDKILDXNXRKSFFTDYGQIIQXXYAYL 371
>gb|BF221274.1|BF221274 NXCI_156_G07_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_156_G07 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 528
Score = 149 bits (321), Expect = 1e-035
Identities = 58/104 (55%), Positives = 73/104 (70%)
Frame = +3 / +2
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K PVFTF
Sbjct: 215 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 394
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGY 344
NQ MLETT ALQD++LDKI DE GRK+ + ++++QGY
Sbjct: 395 NQAXXXMLETTXXALQDISLDKILDENGRKSFFTDYGQIIQQGY 526
>gb|BE520016.1|BE520016 NXCI_028_B08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_028_B08 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 348
Score = 143 bits (307), Expect = 1e-033
Identities = 57/91 (62%), Positives = 68/91 (74%)
Frame = +3 / +3
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++C S K PVFTF
Sbjct: 51 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCXSVKSLPVFTFA 230
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKA 305
NQ G+DMLETTLVALQD++LDKI DE RK+
Sbjct: 231 NQAGLDMLETTLVALQDISLDKILDENXRKS 323
>gb|CO361058.1|CO361058 NDL2_2_H09.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_2_H09_A029 3', mRNA sequence
Length = 764
Score = 143 bits (306), Expect = 2e-033
Identities = 54/86 (62%), Positives = 73/86 (84%)
Frame = +3 / +1
Query: 228 DMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQA 407
DMLETTLVAL D++L+KI D+ GRK+ +++ ++M+QGYAYLPAGVC+S MGR SY++A
Sbjct: 1 DMLETTLVALPDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRA 180
Query: 408 VAWKVLGEDGNVHCLAFCFVNWSFV* 485
+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 181 IAWKVLNDEENPHCIAFTFMNWSFV* 258
>gb|AW626638.1|AW626638 NXNV067G01 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV067G01 5' similar to Arabidopsis thaliana sequence
At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 380
Score = 139 bits (298), Expect = 2e-032
Identities = 52/85 (61%), Positives = 70/85 (82%)
Frame = +3 / +3
Query: 231 MLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAV 410
MLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPAG+CLS MGR SY++A+
Sbjct: 3 MLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAI 182
Query: 411 AWKVLGEDGNVHCLAFCFVNWSFV* 485
AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 183 AWKVLNDEDSTHCIVFMFMNWSFM* 257
>gb|DR180707.1|DR180707 RTMNUT1_34_G11.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_34_G11_A029 3', mRNA sequence
Length = 651
Score = 129 bits (276), Expect = 2e-029
Identities = 49/116 (42%), Positives = 77/116 (66%)
Frame = +3 / +3
Query: 135 LLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHA 314
L FW+H+DA++CC+ K P + F NQ G+DMLETT +L L K E ++A +
Sbjct: 63 LFKAFWNHKDAIICCTSKHIPEYVFANQAGLDMLETTAASLPGLPWLKTVPENEKQAAYK 242
Query: 315 EVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV 482
++ ++++Q Y+Y+PAG+ +S GR V+YE+A+AW VL D ++ + FVNWSF+
Sbjct: 243 DLLQVLQQEYSYMPAGIRISSNGRPVAYERAMAWNVLDSDNSICVVTVMFVNWSFL 410
>gb|CF477362.1|CF477362 RTWW3_7_G07.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_7_G07_A022 3', mRNA sequence
Length = 530
Score = 77.1 bits (162), Expect(2) = 4e-029
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = +3 / +2
Query: 216 QMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPA 359
Q G+DMLETTLVALQD++LDKI DE GRK+ + ++++QGYAYLPA
Sbjct: 2 QAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPA 145
Score = 71.2 bits (149), Expect(2) = 4e-029
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +3 / +3
Query: 360 GVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
G+CLS MGR SY++ +AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 147 GICLSSMGRPASYDRVIAWKVLNDEDSTHCIVFMFMNWSFM* 272
>gb|CO164434.1|CO164434 FLD1_48_A12.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_48_A12_A029 3', mRNA sequence
Length = 801
Score = 127 bits (273), Expect = 6e-029
Identities = 48/116 (41%), Positives = 77/116 (66%)
Frame = +3 / +3
Query: 135 LLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHA 314
L FW+H+DA++CC+ K P + F NQ G+DMLETT +L L K E ++A +
Sbjct: 192 LFKAFWNHKDAIICCTSKHIPEYVFANQAGLDMLETTAASLPGLPWLKTVPENEKQAAYK 371
Query: 315 EVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV 482
++ ++++Q Y+Y+PAG+ +S GR V+YE+A+AW VL D ++ + F+NWSF+
Sbjct: 372 DLLQVLQQEYSYMPAGIRISSNGRPVAYERAMAWNVLDSDNSICVVTVMFMNWSFL 539
>gb|BF220484.1|BF220484 NXCI_147_B05_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_147_B05 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 462
Score = 116 bits (248), Expect = 2e-025
Identities = 46/82 (56%), Positives = 56/82 (68%)
Frame = +3 / +2
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR H+G DL +A ES+L + W H DA++CCS K FT
Sbjct: 215 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHXDAIMCCSVKXLXXFTXA 394
Query: 213 NQMGVDMLETTLVALQDLTLDK 278
NQ + MLETTLVALQD++ K
Sbjct: 395 NQAXLXMLETTLVALQDISXXK 460
>gb|BX678846.1|BX678846 BX678846 RS Pinus pinaster cDNA clone RS15H09, mRNA sequence
Length = 428
Score = 114 bits (244), Expect = 6e-025
Identities = 44/111 (39%), Positives = 71/111 (63%)
Frame = +3 / +1
Query: 135 LLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHA 314
L FW+H+DA++CC+ K P + F NQ G+DMLETT +L L K E ++A +
Sbjct: 94 LFKAFWNHKDAIICCTSKHIPEYVFANQAGLDMLETTAASLPGLPWLKTVPENEKQAAYK 273
Query: 315 EVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFV 467
++ ++++Q Y+Y+PAG+ +S GR V+YE+A+ W VL D ++ + FV
Sbjct: 274 DLLQVLQQEYSYMPAGIRISSNGRPVAYERAMGWNVLDSDNSICVVTVMFV 426
>gb|BQ654722.1|BQ654722 NXRV084_G12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV084_G12 5' similar to Arabidopsis thaliana
sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 549
Score = 113 bits (241), Expect = 2e-024
Identities = 41/76 (53%), Positives = 52/76 (68%)
Frame = +3 / +3
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEK 194
G +L G+PEA TL RW+CQSYR+HLG +L+ + + ESLL W H DA++CCS
Sbjct: 321 GPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLXSL 500
Query: 195 PVFTFGNQMGVDMLET 242
PVFTF NQ G+DM T
Sbjct: 501 PVFTFANQAGLDMXXT 548
>gb|BM902723.1|BM902723 NXLV_073_D01_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_073_D01 5' similar to Arabidopsis thaliana
sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 437
Score = 111 bits (238), Expect = 4e-024
Identities = 40/67 (59%), Positives = 56/67 (83%)
Frame = +3 / +3
Query: 285 DEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCF 464
DE GRK L ++ ++M+QGYAYLP+G+C+S MGR VSY++A+AWKVL ++ +HC+AF F
Sbjct: 18 DENGRKRLCSDFTQIMQQGYAYLPSGICISSMGRPVSYDRAIAWKVLNDEDVIHCIAFMF 197
Query: 465 VNWSFV* 485
+NWSFV*
Sbjct: 198 LNWSFV* 218
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 399,238,214
Number of Sequences: 355925
Number of extensions: 6050240
Number of successful extensions: 44243
Number of sequences better than 1.0e-020: 70
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 9813011390
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)