TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBL6b07.xg.2.1
(644 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR109631.1|DR109631 RTS1_3_D07.g1_A029 Roots minus sulfu... 232 2e-066
gb|DR016578.1|DR016578 STRS1_11_A05.b1_A034 Shoot tip pitch... 228 2e-064
gb|DR016660.1|DR016660 STRS1_11_A05.g1_A034 Shoot tip pitch... 228 2e-064
gb|DR078276.1|DR078276 RTFEPL1_3_C02.b1_A029 Roots plus add... 226 3e-063
gb|CX649918.1|CX649918 COLD1_42_G07.b1_A029 Root cold Pinus... 216 1e-061
gb|DR079077.1|DR079077 RTFEPL1_9_A04.b1_A029 Roots plus add... 220 1e-061
gb|CX652677.1|CX652677 COLD1_60_F07.g1_A029 Root cold Pinus... 219 8e-060
gb|DR094240.1|DR094240 STRR1_13_G11.b1_A033 Stem Response R... 177 7e-050
gb|DR079154.1|DR079154 RTFEPL1_9_A04.g1_A029 Roots plus add... 177 1e-048
gb|CF390874.1|CF390874 RTDR3_2_E04.b1_A022 Loblolly pine ro... 191 1e-047
gb|DR165911.1|DR165911 RTPHOS1_8_C11.b1_A029 Roots minus ph... 181 1e-044
gb|DR012634.1|DR012634 HEAT1_14_C07.b1_A029 Root at 37 C fo... 178 6e-044
gb|DR100094.1|DR100094 STRR1_61_D02.g1_A033 Stem Response R... 171 1e-041
gb|CX652228.1|CX652228 COLD1_57_F08.g1_A029 Root cold Pinus... 165 6e-040
gb|CO361872.1|CO361872 NDL2_7_D07.g1_A029 Needles control 2... 165 8e-040
gb|CF672239.1|CF672239 RTCNT1_62_F12.b1_A029 Root control P... 86 1e-031
gb|DR080092.1|DR080092 RTFEPL1_20_E02.b1_A029 Roots plus ad... 120 3e-031
gb|DT634654.1|DT634654 EST1149585 Normalized pine embryo li... 122 3e-031
gb|DR688648.1|DR688648 EST1078733 Normalized pine embryo li... 122 3e-031
gb|CO165294.1|CO165294 FLD1_53_D01.g1_A029 Root flooded Pin... 60 4e-031
gb|DR182228.1|DR182228 RTMNUT1_43_E02.g1_A029 Roots minus m... 119 3e-030
gb|CX653278.1|CX653278 COLD1_64_C07.g1_A029 Root cold Pinus... 118 6e-030
gb|DR052951.1|DR052951 RTCA1_7_H11.g1_A029 Roots minus calc... 75 6e-030
gb|CO175745.1|CO175745 NDL1_56_E08.g1_A029 Needles control ... 73 7e-030
gb|DR099217.1|DR099217 STRR1_54_A11.b1_A033 Stem Response R... 72 2e-029
gb|DR097941.1|DR097941 STRR1_38_C04.b1_A033 Stem Response R... 119 3e-029
gb|DR099216.1|DR099216 STRR1_54_A09.b1_A033 Stem Response R... 109 3e-029
gb|DR099283.1|DR099283 STRR1_54_A09.g1_A033 Stem Response R... 109 3e-029
gb|DR055524.1|DR055524 RTCA1_24_F05.b1_A029 Roots minus cal... 73 3e-029
gb|DT637288.1|DT637288 EST1152219 Normalized pine embryo li... 113 4e-029
gb|CV035370.1|CV035370 RTNACL1_15_D03.g1_A029 Roots plus ad... 74 5e-029
gb|CX649748.1|CX649748 COLD1_41_F04.b1_A029 Root cold Pinus... 68 7e-029
gb|CO201810.1|CO201810 RTCNT2_8_G01.b1_A029 Root control 2 ... 116 9e-029
gb|DR692133.1|DR692133 EST1082221 Normalized pine embryo li... 111 1e-028
gb|DT638410.1|DT638410 EST1153341 Normalized pine embryo li... 113 2e-028
gb|DR693856.1|DR693856 EST1083946 Normalized pine embryo li... 113 2e-028
gb|CO370117.1|CO370117 RTK1_65_D02.g1_A029 Roots minus pota... 75 3e-028
gb|DT634540.1|DT634540 EST1149471 Normalized pine embryo li... 80 4e-028
gb|DR687984.1|DR687984 EST1078067 Normalized pine embryo li... 80 4e-028
gb|DR078348.1|DR078348 RTFEPL1_3_C02.g1_A029 Roots plus add... 106 4e-028
gb|DR081541.1|DR081541 RTFEPL1_30_H10.b1_A029 Roots plus ad... 100 5e-028
gb|CX646255.1|CX646255 COLD1_8_F06.b1_A029 Root cold Pinus ... 69 6e-028
gb|DR687970.1|DR687970 EST1078053 Normalized pine embryo li... 112 8e-028
gb|DR098008.1|DR098008 STRR1_38_C04.g1_A033 Stem Response R... 114 8e-028
gb|DT634367.1|DT634367 EST1149298 Normalized pine embryo li... 112 8e-028
gb|DR017942.1|DR017942 STRS1_19_B04.g1_A034 Shoot tip pitch... 111 1e-027
dbj|BD267395.1| Compositions isolated from plant cells and ... 113 2e-027
gb|CO165617.1|CO165617 FLD1_55_F11.g1_A029 Root flooded Pin... 111 3e-027
gb|DR013519.1|DR013519 HEAT1_19_G02.g1_A029 Root at 37 C fo... 107 3e-027
gb|CX651434.1|CX651434 COLD1_52_H06.b1_A029 Root cold Pinus... 115 3e-027
gb|CO165023.1|CO165023 FLD1_51_G08.g1_A029 Root flooded Pin... 89 4e-027
gb|CO199979.1|CO199979 GEO2_4_E09.g1_A032 Root gravitropism... 97 5e-027
gb|DR048385.1|DR048385 RTBOR1_8_B10.g2_A029 Roots plus adde... 81 5e-027
gb|CO366400.1|CO366400 RTK1_27_D07.g1_A029 Roots minus pota... 111 7e-027
gb|CO363690.1|CO363690 RTK1_11_F05.b1_A029 Roots minus pota... 71 1e-026
gb|BE582268.1|BE582268 NXCI_031_C02_F NXCI (Nsf Xylem Compr... 105 1e-026
gb|BE643868.1|BE643868 NXCI_048_C09_F NXCI (Nsf Xylem Compr... 108 1e-026
gb|BX252982.1|BX252982 BX252982 Pinus pinaster differenciat... 112 1e-026
gb|CO365254.1|CO365254 RTK1_24_C11.g1_A029 Roots minus pota... 59 2e-026
gb|CF478389.1|CF478389 RTWW3_18_H02.g1_A022 Well-watered lo... 109 2e-026
gb|CX650288.1|CX650288 COLD1_44_E06.g1_A029 Root cold Pinus... 64 2e-026
gb|DT637449.1|DT637449 EST1152380 Normalized pine embryo li... 76 2e-026
gb|DR692320.1|DR692320 EST1082408 Normalized pine embryo li... 76 2e-026
gb|DR167714.1|DR167714 RTPHOS1_20_C10.g1_A029 Roots minus p... 73 4e-026
gb|CF670225.1|CF670225 RTCNT1_48_G11.g1_A029 Root control P... 76 5e-026
gb|CV035564.1|CV035564 RTNACL1_16_H10.g1_A029 Roots plus ad... 67 6e-026
dbj|BD267217.1| Compositions isolated from plant cells and ... 113 9e-026
gb|DR096208.1|DR096208 STRR1_26_B03.g1_A033 Stem Response R... 73 1e-025
gb|CF389801.1|CF389801 RTDR2_5_E12.g1_A021 Loblolly pine ro... 75 1e-025
gb|CO199471.1|CO199471 GEO2_1_A02.g1_A032 Root gravitropism... 67 1e-025
gb|DR694632.1|DR694632 EST1084724 Normalized pine embryo li... 67 1e-025
gb|DT638526.1|DT638526 EST1153457 Normalized pine embryo li... 67 1e-025
gb|DR015775.1|DR015775 STRS1_5_C04.g1_A034 Shoot tip pitch ... 67 1e-025
gb|DR091249.1|DR091249 RTAL1_20_G10.b1_A029 Roots plus adde... 68 1e-025
gb|CO158440.1|CO158440 FLD1_6_H11.g1_A029 Root flooded Pinu... 106 1e-025
dbj|BD267181.1| Compositions isolated from plant cells and ... 74 1e-025
gb|CX649831.1|CX649831 COLD1_41_F04.g1_A029 Root cold Pinus... 68 1e-025
gb|DR017828.1|DR017828 STRS1_18_F03.g1_A034 Shoot tip pitch... 73 2e-025
gb|AI812798.1|AI812798 19C6 Pine Lambda Zap Xylem library P... 77 3e-025
gb|DR057603.1|DR057603 RTNIT1_6_F06.g1_A029 Roots minus nit... 116 3e-025
gb|CO165168.1|CO165168 FLD1_52_G06.g1_A029 Root flooded Pin... 96 3e-025
gb|DR025590.1|DR025590 STRS1_72_C01.g1_A034 Shoot tip pitch... 80 4e-025
gb|CX713766.1|CX713766 RTPQ1_12_G10.g1_A032 Roots treated w... 74 5e-025
gb|DR010947.1|DR010947 HEAT1_2_G07.b1_A029 Root at 37 C for... 73 5e-025
gb|DR686689.1|DR686689 EST1076767 Normalized pine embryo li... 115 5e-025
gb|DT633576.1|DT633576 EST1148507 Normalized pine embryo li... 115 5e-025
gb|CF667809.1|CF667809 RTCNT1_32_D10.g1_A029 Root control P... 69 5e-025
dbj|BD267201.1| Compositions isolated from plant cells and ... 106 6e-025
gb|DR686107.1|DR686107 EST1076185 Normalized pine embryo li... 107 6e-025
gb|DT635022.1|DT635022 EST1149953 Normalized pine embryo li... 96 6e-025
gb|DR689049.1|DR689049 EST1079135 Normalized pine embryo li... 96 6e-025
gb|CO366317.1|CO366317 RTK1_27_D07.b1_A029 Roots minus pota... 110 8e-025
gb|CO172568.1|CO172568 NDL1_30_B08.g1_A029 Needles control ... 108 8e-025
gb|CV034109.1|CV034109 RTNACL1_38_E12.g1_A029 Roots plus ad... 111 8e-025
gb|DR059534.1|DR059534 RTNIT1_18_F05.b1_A029 Roots minus ni... 79 9e-025
gb|CD027945.1|CD027945 NXNV_140_D01_F Nsf Xylem Normal wood... 102 1e-024
gb|DR088688.1|DR088688 RTAL1_3_G01.g1_A029 Roots plus added... 82 1e-024
gb|CX649956.1|CX649956 COLD1_42_C10.g1_A029 Root cold Pinus... 102 2e-024
dbj|BD267166.1| Compositions isolated from plant cells and ... 113 2e-024
gb|CF397319.1|CF397319 RTDS3_2_C03.g1_A022 Drought-stressed... 103 2e-024
gb|DR387062.1|DR387062 RTHG1_19_D12.b1_A029 Roots plus adde... 109 2e-024
gb|DR387131.1|DR387131 RTHG1_19_D12.g1_A029 Roots plus adde... 109 2e-024
gb|CV032766.1|CV032766 RTNACL1_18_E08.b1_A029 Roots plus ad... 106 3e-024
gb|DR744009.1|DR744009 RTCU1_19_D08.g1_A029 Roots plus adde... 69 3e-024
gb|CF479193.1|CF479193 RTWW3_24_F03.g1_A022 Well-watered lo... 69 3e-024
gb|CF476188.1|CF476188 RTWW2_21_F05.g1_A021 Well-watered lo... 68 4e-024
gb|CF395102.1|CF395102 RTDS2_9_F10.g1_A021 Drought-stressed... 97 5e-024
gb|DN609148.1|DN609148 EST962198 Subtracted pine embryo lib... 73 5e-024
gb|DN610243.1|DN610243 EST963293 Subtracted pine embryo lib... 73 5e-024
gb|DT628418.1|DT628418 EST1157167 Subtracted pine embryo li... 73 5e-024
gb|CV036120.1|CV036120 RTNACL1_44_G02.g1_A029 Roots plus ad... 83 5e-024
gb|CO361399.1|CO361399 NDL2_4_D05.g1_A029 Needles control 2... 111 6e-024
gb|CV035770.1|CV035770 RTNACL1_42_G08.b1_A029 Roots plus ad... 105 6e-024
gb|CV035848.1|CV035848 RTNACL1_42_G08.g1_A029 Roots plus ad... 105 7e-024
gb|DR179438.1|DR179438 RTMNUT1_22_D07.b2_A029 Roots minus m... 72 7e-024
gb|CF474781.1|CF474781 RTWW2_7_H01.g1_A021 Well-watered lob... 107 9e-024
gb|CV036047.1|CV036047 RTNACL1_44_G02.b1_A029 Roots plus ad... 84 1e-023
gb|DR019057.1|DR019057 STRS1_27_C03.g1_A034 Shoot tip pitch... 104 1e-023
gb|CX651917.1|CX651917 COLD1_55_E03.g1_A029 Root cold Pinus... 65 1e-023
gb|CO172176.1|CO172176 NDL1_27_H03.g1_A029 Needles control ... 72 1e-023
gb|DR385473.1|DR385473 RTHG1_8_H01.g1_A029 Roots plus added... 106 2e-023
gb|DR017332.1|DR017332 STRS1_15_D02.g1_A034 Shoot tip pitch... 110 2e-023
gb|DR023122.1|DR023122 STRS1_55_D03.g1_A034 Shoot tip pitch... 101 2e-023
dbj|BD267226.1| Compositions isolated from plant cells and ... 106 2e-023
gb|CF397993.1|CF397993 RTDS3_22_C04.b1_A022 Drought-stresse... 110 2e-023
gb|DR095398.1|DR095398 STRR1_20_F07.g1_A033 Stem Response R... 103 2e-023
gb|CO363405.1|CO363405 RTK1_9_C03.g1_A029 Roots minus potas... 97 2e-023
gb|BQ700210.1|BQ700210 NXRV102_F12_F NXRV (Nsf Xylem Root w... 109 3e-023
gb|DR682209.1|DR682209 EST1072284 Normalized pine embryo li... 105 3e-023
gb|DT630896.1|DT630896 EST1145827 Normalized pine embryo li... 105 3e-023
gb|CF398449.1|CF398449 RTDS3_12_E10.g1_A022 Drought-stresse... 109 4e-023
gb|BX681873.1|BX681873 BX681873 RS Pinus pinaster cDNA clon... 74 6e-023
dbj|BD267213.1| Compositions isolated from plant cells and ... 105 6e-023
gb|CO172120.1|CO172120 NDL1_27_A05.g1_A029 Needles control ... 100 6e-023
gb|BQ655843.1|BQ655843 NXRV100_A07_F NXRV (Nsf Xylem Root w... 68 6e-023
gb|CO160784.1|CO160784 FLD1_24_F09.b1_A029 Root flooded Pin... 79 7e-023
gb|DR017869.1|DR017869 STRS1_19_B04.b1_A034 Shoot tip pitch... 108 8e-023
gb|CO164652.1|CO164652 FLD1_49_A03.g1_A029 Root flooded Pin... 79 8e-023
gb|DR079189.1|DR079189 RTFEPL1_9_E02.g1_A029 Roots plus add... 74 8e-023
gb|DR178712.1|DR178712 RTMNUT1_13_B09.g1_A029 Roots minus m... 91 8e-023
gb|DR022314.1|DR022314 STRS1_50_F09.b1_A034 Shoot tip pitch... 91 9e-023
gb|DR022994.1|DR022994 STRS1_54_G05.g1_A034 Shoot tip pitch... 54 1e-022
gb|CX649412.1|CX649412 COLD1_35_D03.b1_A029 Root cold Pinus... 107 1e-022
gb|CX649496.1|CX649496 COLD1_35_D03.g1_A029 Root cold Pinus... 107 1e-022
gb|DR746267.1|DR746267 RTCU1_35_G07.g1_A029 Roots plus adde... 107 1e-022
gb|DT635388.1|DT635388 EST1150319 Normalized pine embryo li... 95 1e-022
gb|DR689529.1|DR689529 EST1079615 Normalized pine embryo li... 95 1e-022
gb|BQ696030.1|BQ696030 NXPV_035_F02_F NXPV (Nsf Xylem Plani... 95 1e-022
dbj|BD267251.1| Compositions isolated from plant cells and ... 93 1e-022
gb|CO363349.1|CO363349 RTK1_9_E09.b1_A029 Roots minus potas... 57 1e-022
dbj|BD266925.1| Compositions isolated from plant cells and ... 96 1e-022
gb|DR177846.1|DR177846 RTMNUT1_7_F04.g1_A029 Roots minus mi... 95 2e-022
gb|DT636541.1|DT636541 EST1151472 Normalized pine embryo li... 96 2e-022
dbj|BD267272.1| Compositions isolated from plant cells and ... 99 2e-022
gb|CO361947.1|CO361947 NDL2_8_D04.b1_A029 Needles control 2... 96 2e-022
gb|DR051070.1|DR051070 RTBOR1_27_B01.g1_A029 Roots plus add... 99 2e-022
gb|DR691139.1|DR691139 EST1081225 Normalized pine embryo li... 96 2e-022
gb|CO362134.1|CO362134 RTK1_1_B05.g1_A029 Roots minus potas... 99 2e-022
gb|CO362143.1|CO362143 RTK1_1_C05.g1_A029 Roots minus potas... 99 2e-022
gb|DR017202.1|DR017202 STRS1_14_E08.g1_A034 Shoot tip pitch... 96 2e-022
gb|DR094132.1|DR094132 STRR1_12_D10.g1_A033 Stem Response R... 73 2e-022
gb|CO200331.1|CO200331 GEO2_6_G03.g1_A032 Root gravitropism... 73 2e-022
gb|DT635766.1|DT635766 EST1150697 Normalized pine embryo li... 78 2e-022
gb|DN460720.1|DN460720 EST956519 Sequencing ESTs from loblo... 65 2e-022
gb|DT627163.1|DT627163 EST1160239 Sequencing ESTs from lobl... 65 3e-022
gb|DR160144.1|DR160144 RTFE1_4_C03.b1_A029 Roots minus iron... 90 3e-022
gb|CF471161.1|CF471161 RTDS1_16_H03.g1_A015 Drought-stresse... 95 3e-022
gb|CO169185.1|CO169185 NDL1_5_G05.b1_A029 Needles control P... 93 3e-022
gb|AW437900.1|AW437900 ST78A08 Pine TriplEx shoot tip libra... 105 4e-022
dbj|BD266928.1| Compositions isolated from plant cells and ... 96 4e-022
gb|CF390130.1|CF390130 RTDR2_12_E10.g1_A021 Loblolly pine r... 57 5e-022
gb|DT633519.1|DT633519 EST1148450 Normalized pine embryo li... 97 5e-022
gb|DR015465.1|DR015465 STRS1_3_E03.g1_A034 Shoot tip pitch ... 67 5e-022
gb|CF387594.1|CF387594 RTDR1_20_H05.g1_A015 Loblolly pine r... 64 5e-022
gb|CF670687.1|CF670687 RTCNT1_51_H04.g1_A029 Root control P... 61 5e-022
gb|CX651001.1|CX651001 COLD1_49_B02.g1_A029 Root cold Pinus... 70 7e-022
gb|BX251830.1|BX251830 BX251830 Pinus pinaster differenciat... 65 7e-022
gb|CF391262.1|CF391262 RTDR3_4_D07.g1_A022 Loblolly pine ro... 70 7e-022
gb|CO362499.1|CO362499 RTK1_4_A06.b1_A029 Roots minus potas... 56 1e-021
gb|DR015340.1|DR015340 STRS1_2_H08.g1_A034 Shoot tip pitch ... 57 1e-021
gb|CF471819.1|CF471819 RTDS1_6_A09.g1_A015 Drought-stressed... 69 1e-021
gb|BX248859.1|BX248859 BX248859 Pinus pinaster differenciat... 104 1e-021
gb|CO166154.1|CO166154 FLD1_59_E11.g1_A029 Root flooded Pin... 70 1e-021
gb|CX649179.1|CX649179 COLD1_33_B01.g1_A029 Root cold Pinus... 70 1e-021
gb|DR059653.1|DR059653 RTNIT1_19_A07.b1_A029 Roots minus ni... 70 1e-021
gb|CO364807.1|CO364807 RTK1_21_H09.g1_A029 Roots minus pota... 70 1e-021
gb|DR117053.1|DR117053 RTMG1_4_A01.g1_A029 Roots minus magn... 70 1e-021
gb|DR092735.1|DR092735 STRR1_3_C05.g1_A033 Stem Response Re... 61 1e-021
gb|DR117868.1|DR117868 RTMG1_9_E09.g1_A029 Roots minus magn... 70 1e-021
dbj|BD267385.1| Compositions isolated from plant cells and ... 54 2e-021
gb|BQ197476.1|BQ197476 NXLV114_H07_F NXLV (Nsf Xylem Late w... 103 2e-021
gb|DR090764.1|DR090764 RTAL1_17_E12.b1_A029 Roots plus adde... 67 2e-021
gb|DR011223.1|DR011223 HEAT1_4_G08.b1_A029 Root at 37 C for... 57 2e-021
gb|CV032802.1|CV032802 RTNACL1_18_A04.g1_A029 Roots plus ad... 96 2e-021
gb|CX647035.1|CX647035 COLD1_13_C04.b1_A029 Root cold Pinus... 62 2e-021
gb|DR057358.1|DR057358 RTNIT1_5_G12.b1_A029 Roots minus nit... 56 2e-021
gb|DR178856.1|DR178856 RTMNUT1_14_A01.g1_A029 Roots minus m... 68 2e-021
gb|DR093624.1|DR093624 STRR1_9_A02.g1_A033 Stem Response Re... 90 2e-021
gb|DT632627.1|DT632627 EST1147558 Normalized pine embryo li... 55 3e-021
gb|DR685116.1|DR685116 EST1075193 Normalized pine embryo li... 55 3e-021
gb|DR015252.1|DR015252 STRS1_2_H08.b1_A034 Shoot tip pitch ... 57 5e-021
gb|DR015193.1|DR015193 STRS1_2_B08.b1_A034 Shoot tip pitch ... 62 5e-021
gb|BX253174.1|BX253174 BX253174 Pinus pinaster differenciat... 89 5e-021
gb|BM493718.1|BM493718 NXLV_069_F02_F NXLV (Nsf Xylem Late ... 87 5e-021
gb|CD028497.1|CD028497 NXSI_119_F09_F NXSI (Nsf Xylem Side ... 74 5e-021
gb|DR051020.1|DR051020 RTBOR1_27_E01.b1_A029 Roots plus add... 55 5e-021
gb|DR099349.1|DR099349 STRR1_55_A07.b1_A033 Stem Response R... 91 6e-021
dbj|BD267340.1| Compositions isolated from plant cells and ... 54 8e-021
dbj|BD267387.1| Compositions isolated from plant cells and ... 54 8e-021
gb|CO160716.1|CO160716 FLD1_23_C11.g1_A029 Root flooded Pin... 54 8e-021
gb|BX250171.1|BX250171 BX250171 Pinus pinaster differenciat... 56 8e-021
gb|DR095530.1|DR095530 STRR1_21_G01.g1_A033 Stem Response R... 68 9e-021
>gb|DR109631.1|DR109631 RTS1_3_D07.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_3_D07_A029 5', mRNA sequence
Length = 720
Score = 232 bits (501), Expect(2) = 2e-066
Identities = 97/156 (62%), Positives = 119/156 (76%)
Frame = +2 / +2
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I HRDVK++NILLD +F+VKVADFGL R+ P +HV+T PQGTPGYVDP YHQCY+LTE
Sbjct: 125 IFHRDVKSSNILLDENFNVKVADFGLCRIVPVNASHVTTAPQGTPGYVDPEYHQCYQLTE 304
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDGE 448
KSDVYSFGVVLVE++S+K AVD+ R+ +EI LANMA ++IQ + +LVDP+L E + E
Sbjct: 305 KSDVYSFGVVLVEIISAKLAVDINRNRNEIGLANMAKSKIQEGALHELVDPQLEIEANHE 484
Query: 449 TKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNRI 556
K ++ VAELAFRCL ERD RP M V L I
Sbjct: 485 LKVAVSAVAELAFRCLASERDGRPHMTEVAAQLKEI 592
Score = 98.7 bits (209), Expect(2) = 3e-022
Identities = 53/92 (57%), Positives = 57/92 (61%)
Frame = -3 / -1
Query: 375 AMLARLISLWLLPMSTAGLEDTSSTSTTPKLYTSLFSVSL*HWWYTGST*PGVPCGTVDT 196
AMLAR IS MSTA L + ST TTPKL TS FSV+ *H WY+GST PGVPCG V T
Sbjct: 411 AMLARPISFLFRFMSTANLAEMISTKTTPKL*TSDFSVN**H*WYSGSTYPGVPCGAVVT 232
Query: 195 WVTSGGYRRDSPKSATFTWKLLSSSMLLVFTS 100
G SPKSAT T K S +L FTS
Sbjct: 231 CEALTGTILQSPKSATLTLKFSSKRILEDFTS 136
Score = 42.3 bits (86), Expect(2) = 2e-066
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +2 / +2
Query: 14 GLTWPRRMSIAIETAEALAYLHAVE 88
GL W R++IAI+TAEALA+LH+++
Sbjct: 44 GLPWNARLNIAIQTAEALAFLHSID 118
Score = 26.3 bits (51), Expect(2) = 3e-022
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3 / -1
Query: 540 STTXXIDGRESLSSCKHRNASSAT 469
+ T + G SLS +HR A+SAT
Sbjct: 576 AATSVMCGLPSLSDARHRKANSAT 505
>gb|DR016578.1|DR016578 STRS1_11_A05.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_11_A05_A034 3', mRNA sequence
Length = 881
Score = 228 bits (493), Expect(2) = 2e-064
Identities = 93/156 (59%), Positives = 119/156 (76%)
Frame = +2 / +3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I HRDVK++NILLD + K+ADFGL RL P + +HV+T+PQGTPGYVDP Y+QCY+LTE
Sbjct: 129 IFHRDVKSSNILLDENLDTKLADFGLCRLVPVDASHVTTIPQGTPGYVDPEYYQCYQLTE 308
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDGE 448
KSDVYSFGVVLVE++S+K A+D+ R+ EINLAN+A+ +IQ + +LVDP+L E + E
Sbjct: 309 KSDVYSFGVVLVEIISAKIAMDINRNRREINLANLAVTKIQEGALDELVDPQLEIEVNHE 488
Query: 449 TKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNRI 556
K ++ VAELAFRCL ERD RP M +V L I
Sbjct: 489 VKMTVSAVAELAFRCLASERDDRPQMEEIVAQLEEI 596
Score = 95.9 bits (203), Expect(2) = 5e-021
Identities = 54/96 (56%), Positives = 58/96 (60%)
Frame = -3 / -2
Query: 387 ILLRAMLARLISLWLLPMSTAGLEDTSSTSTTPKLYTSLFSVSL*HWWYTGST*PGVPCG 208
I + A LARLISL MS A L + ST TTPKLYTS FSVS *H Y+GST PGVPCG
Sbjct: 427 IFVTAKLARLISLLFRFMSIAILAEMISTKTTPKLYTSDFSVS**H**YSGSTYPGVPCG 248
Query: 207 TVDTWVTSGGYRRDSPKSATFTWKLLSSSMLLVFTS 100
V T S G SPKSA K S +L FTS
Sbjct: 247 IVVTCEASTGTSLQSPKSANLVSKFSSKRILEDFTS 140
Score = 39.6 bits (80), Expect(2) = 2e-064
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +2 / +3
Query: 11 RGLTWPRRMSIAIETAEALAYLHAVE 88
+GL W R++IA++TA+ALA+LH ++
Sbjct: 45 KGLPWNTRLNIALQTAQALAFLHGLD 122
Score = 24.9 bits (48), Expect(2) = 5e-021
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3 / -2
Query: 540 STTXXIDGRESLSSCKHRNASSAT 469
+T I G SLS +H A+SAT
Sbjct: 580 ATISSICGLSSLSEARHLKANSAT 509
>gb|DR016660.1|DR016660 STRS1_11_A05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_11_A05_A034 5', mRNA sequence
Length = 860
Score = 228 bits (493), Expect(2) = 2e-064
Identities = 93/156 (59%), Positives = 119/156 (76%)
Frame = +2 / +1
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I HRDVK++NILLD + K+ADFGL RL P + +HV+T+PQGTPGYVDP Y+QCY+LTE
Sbjct: 190 IFHRDVKSSNILLDENLDTKLADFGLCRLVPVDASHVTTIPQGTPGYVDPEYYQCYQLTE 369
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDGE 448
KSDVYSFGVVLVE++S+K A+D+ R+ EINLAN+A+ +IQ + +LVDP+L E + E
Sbjct: 370 KSDVYSFGVVLVEIISAKIAMDINRNRREINLANLAVTKIQEGALDELVDPQLEIEVNHE 549
Query: 449 TKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNRI 556
K ++ VAELAFRCL ERD RP M +V L I
Sbjct: 550 VKMTVSAVAELAFRCLASERDDRPQMEEIVAQLEEI 657
Score = 95.9 bits (203), Expect(2) = 5e-021
Identities = 54/96 (56%), Positives = 58/96 (60%)
Frame = -3 / -1
Query: 387 ILLRAMLARLISLWLLPMSTAGLEDTSSTSTTPKLYTSLFSVSL*HWWYTGST*PGVPCG 208
I + A LARLISL MS A L + ST TTPKLYTS FSVS *H Y+GST PGVPCG
Sbjct: 488 IFVTAKLARLISLLFRFMSIAILAEMISTKTTPKLYTSDFSVS**H**YSGSTYPGVPCG 309
Query: 207 TVDTWVTSGGYRRDSPKSATFTWKLLSSSMLLVFTS 100
V T S G SPKSA K S +L FTS
Sbjct: 308 IVVTCEASTGTSLQSPKSANLVSKFSSKRILEDFTS 201
Score = 39.6 bits (80), Expect(2) = 2e-064
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +2 / +1
Query: 11 RGLTWPRRMSIAIETAEALAYLHAVE 88
+GL W R++IA++TA+ALA+LH ++
Sbjct: 106 KGLPWNTRLNIALQTAQALAFLHGLD 183
Score = 24.9 bits (48), Expect(2) = 5e-021
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3 / -1
Query: 540 STTXXIDGRESLSSCKHRNASSAT 469
+T I G SLS +H A+SAT
Sbjct: 641 ATISSICGLSSLSEARHLKANSAT 570
>gb|DR078276.1|DR078276 RTFEPL1_3_C02.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_3_C02_A029 3', mRNA sequence
Length = 761
Score = 226 bits (489), Expect(2) = 3e-063
Identities = 93/156 (59%), Positives = 120/156 (76%)
Frame = +2 / +3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
+IHRDVK++NILLD + +K+ADFGL RL P + +HV+T+PQGTPGYVDP Y+QCY+LTE
Sbjct: 75 MIHRDVKSSNILLDENLDIKLADFGLCRLVPLDASHVTTIPQGTPGYVDPEYYQCYQLTE 254
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDGE 448
KSDVYSFGVVLVE++S+K A+D+ R+ EINLAN+A+ +IQ ++ +LVDP+L E E
Sbjct: 255 KSDVYSFGVVLVEIISAKIAMDINRNRREINLANLAITKIQEGDLHELVDPQLEIEVTHE 434
Query: 449 TKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNRI 556
K + AELAFRCL ERD RP M VV L +I
Sbjct: 435 MKVMVRAAAELAFRCLASERDDRPDMEEVVGQLEKI 542
Score = 37.3 bits (75), Expect(2) = 3e-063
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = +2 / +3
Query: 23 WPRRMSIAIETAEALAYLHAVE 88
W R++IAI+TA+ALA+LHA++
Sbjct: 3 WNSRLNIAIQTAQALAFLHALD 68
>gb|CX649918.1|CX649918 COLD1_42_G07.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_42_G07_A029 3', mRNA sequence
Length = 757
Score = 216 bits (467), Expect(2) = 1e-061
Identities = 91/155 (58%), Positives = 115/155 (74%)
Frame = +2 / -2
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I HRDVK++NILLD++F+VKVADFGL RL P +HV+T PQGTPGYVDP YH+C++LTE
Sbjct: 465 IFHRDVKSSNILLDDNFNVKVADFGLCRLVPLNASHVTTSPQGTPGYVDPEYHECFQLTE 286
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDGE 448
KSDVYSFGVVLVE++S+K AVD+ R EINLA MA ++IQ + +LVDP+L E + +
Sbjct: 285 KSDVYSFGVVLVEIISAKLAVDINRKRGEINLAVMATSKIQEGALHELVDPQLEIEKNDQ 106
Query: 449 TKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNR 553
+ + VAEL FRCL E D RP M V L +
Sbjct: 105 VEAMVSAVAELIFRCLASEGDDRPHMKEVAAQLEQ 1
Score = 97.7 bits (207), Expect(2) = 3e-021
Identities = 53/92 (57%), Positives = 56/92 (60%)
Frame = -3 / +2
Query: 375 AMLARLISLWLLPMSTAGLEDTSSTSTTPKLYTSLFSVSL*HWWYTGST*PGVPCGTVDT 196
AM AR IS MSTA L + ST TTPKL TS FSVS H WY+GST PGVPCG V T
Sbjct: 179 AMTARFISPLFRFMSTANLAEMISTRTTPKL*TSDFSVS*KHSWYSGSTYPGVPCGEVVT 358
Query: 195 WVTSGGYRRDSPKSATFTWKLLSSSMLLVFTS 100
G SPKSAT T KL S +L FTS
Sbjct: 359 CEAFKGTSLQSPKSATLTLKLSSKRILEDFTS 454
Score = 42.3 bits (86), Expect(2) = 1e-061
Identities = 15/26 (57%), Positives = 23/26 (88%)
Frame = +2 / -2
Query: 11 RGLTWPRRMSIAIETAEALAYLHAVE 88
+GL W R++IAI+TA+ALA+LH+V+
Sbjct: 549 KGLPWDTRLNIAIQTAKALAFLHSVD 472
Score = 24.0 bits (46), Expect(2) = 3e-021
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3 / +2
Query: 540 STTXXIDGRESLSSCKHRNASSAT 469
+ T + G S S +HRN +SAT
Sbjct: 14 AATSFMCGLSSPSDARHRNINSAT 85
>gb|DR079077.1|DR079077 RTFEPL1_9_A04.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_A04_A029 3', mRNA sequence
Length = 892
Score = 220 bits (475), Expect(2) = 1e-061
Identities = 94/156 (60%), Positives = 117/156 (75%)
Frame = +2 / +3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I HRDVK++NILLD +F+VK+ADFGL R P V HV+T PQGTPGYVDP YH+ Y+ TE
Sbjct: 144 IFHRDVKSSNILLDENFNVKMADFGLCRHMPVSVLHVTTTPQGTPGYVDPEYHKYYQFTE 323
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDGE 448
KSDVYSFGVVLVE++S+K AVD+ R EINLAN+A+++IQ + +LVDP+L ET+ E
Sbjct: 324 KSDVYSFGVVLVEIISAKLAVDVNRDTREINLANLAISKIQEGALHELVDPQLDMETNEE 503
Query: 449 TKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNRI 556
K ++ VA+LAFRCL E D RP M VV L I
Sbjct: 504 IKVTVSAVAQLAFRCLASESDDRPHMKEVVAQLEVI 611
Score = 38.2 bits (77), Expect(2) = 1e-061
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = +2 / +3
Query: 14 GLTWPRRMSIAIETAEALAYLH 79
GL+W R++IA++TA+ALA+LH
Sbjct: 63 GLSWNTRLNIALQTAQALAFLH 128
>gb|CX652677.1|CX652677 COLD1_60_F07.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_60_F07_A029 5', mRNA sequence
Length = 579
Score = 219 bits (473), Expect(2) = 8e-060
Identities = 92/156 (58%), Positives = 116/156 (74%)
Frame = +2 / +2
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I HRDVK+ NILLD++F+VKVADFGL RL P +HV+T PQGTPGYVDP YH+C++LTE
Sbjct: 65 IFHRDVKSANILLDDNFNVKVADFGLCRLVPLNASHVTTAPQGTPGYVDPEYHECFQLTE 244
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDGE 448
KSDVYSFGVVLVE++S+K AVD+ R EINLA MA+++IQ + +LVDP+L E + +
Sbjct: 245 KSDVYSFGVVLVEIISAKLAVDINRKRGEINLAFMAMSKIQEGALHELVDPQLEIEKNDQ 424
Query: 449 TKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNRI 556
+ + VAEL FRCL E D RP M V L +I
Sbjct: 425 VEAMVSAVAELIFRCLASEGDDRPHMKEVAAQLEQI 532
Score = 100 bits (214), Expect(2) = 3e-022
Identities = 54/92 (58%), Positives = 57/92 (61%)
Frame = -3 / -1
Query: 375 AMLARLISLWLLPMSTAGLEDTSSTSTTPKLYTSLFSVSL*HWWYTGST*PGVPCGTVDT 196
AM AR IS MSTA L + ST TTPKL TS FSVS H WY+GST*PGVPCG V T
Sbjct: 351 AMKARFISPLFRFMSTANLAEMISTRTTPKL*TSDFSVS*KHSWYSGST*PGVPCGAVVT 172
Query: 195 WVTSGGYRRDSPKSATFTWKLLSSSMLLVFTS 100
G SPKSAT T KL S +L FTS
Sbjct: 171 CEAFKGTSLQSPKSATLTLKLSSKRILADFTS 76
Score = 33.1 bits (66), Expect(2) = 8e-060
Identities = 12/19 (63%), Positives = 19/19 (100%)
Frame = +2 / +2
Query: 32 RMSIAIETAEALAYLHAVE 88
R++IAI+TA+ALA+LH+V+
Sbjct: 2 RLNIAIQTAKALAFLHSVD 58
Score = 24.0 bits (46), Expect(2) = 3e-022
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3 / -1
Query: 540 STTXXIDGRESLSSCKHRNASSAT 469
+ T + G S S +HRN +SAT
Sbjct: 516 AATSFMCGLSSPSDARHRNINSAT 445
>gb|DR094240.1|DR094240 STRR1_13_G11.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_13_G11_A033 3', mRNA sequence
Length = 766
Score = 177 bits (380), Expect(2) = 7e-050
Identities = 71/113 (62%), Positives = 90/113 (79%)
Frame = +2 / -3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I HRDVK+ NILLD F VKVADFGLSR P + THVST QGTPGY+DP YHQC++L++
Sbjct: 344 IFHRDVKSTNILLDEHFQVKVADFGLSRFVPLDATHVSTASQGTPGYIDPEYHQCFQLSD 165
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPEL 427
KSDVYSFGVVL+E++S+K AVD+ R+ EI LA MA+ ++Q+ + +LVDP L
Sbjct: 164 KSDVYSFGVVLMEIISAKIAVDINRTRREIVLATMAIAKVQDGSLHELVDPNL 6
Score = 113 bits (242), Expect = 1e-024
Identities = 57/116 (49%), Positives = 73/116 (62%)
Frame = -3 / +1
Query: 375 AMLARLISLWLLPMSTAGLEDTSSTSTTPKLYTSLFSVSL*HWWYTGST*PGVPCGTVDT 196
A++AR ISL + MSTA L + S TTPKL TS S S HWWY+GS PGVPC V+T
Sbjct: 58 AIVARTISLLVRFMSTAILAEIISIKTTPKL*TSDLSES*KHWWYSGSIYPGVPCEAVET 237
Query: 195 WVTSGGYRRDSPKSATFTWKLLSSSMLLVFTSRCMISTAWRYASASAVSMAMLILR 28
WV S G +SPKSAT TWK S+ +L+ FTS I + +A A ++++ I R
Sbjct: 238 WVASNGTNLESPKSATLTWKCSSNRILVDFTSLWNIGGSRL*RNARA*AVSIQIFR 405
Score = 42.3 bits (86), Expect(2) = 7e-050
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +2 / -3
Query: 11 RGLTWPRRMSIAIETAEALAYLHAVE 88
+GL W R+ I IETA+ALA+LH++E
Sbjct: 428 KGLNWDTRLKICIETAQALAFLHSLE 351
>gb|DR079154.1|DR079154 RTFEPL1_9_A04.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_A04_A029 5', mRNA sequence
Length = 823
Score = 177 bits (380), Expect(2) = 1e-048
Identities = 72/111 (64%), Positives = 90/111 (81%)
Frame = +2 / +1
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I HRDVK++NILLD +F+VK+ADFGL R P V HV+T PQGTPGYVDP YH+ Y+ TE
Sbjct: 490 IFHRDVKSSNILLDENFNVKMADFGLCRHMPVSVLHVTTTPQGTPGYVDPEYHKYYQFTE 669
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDP 421
KSDVYSFGVVLVE++S+K AVD+ R EINLAN+A+++IQ + +LVDP
Sbjct: 670 KSDVYSFGVVLVEIISAKLAVDVNRDTREINLANLAISKIQERALHELVDP 822
Score = 38.2 bits (77), Expect(2) = 1e-048
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = +2 / +1
Query: 14 GLTWPRRMSIAIETAEALAYLH 79
GL+W R++IA++TA+ALA+LH
Sbjct: 409 GLSWNTRLNIALQTAQALAFLH 474
>gb|CF390874.1|CF390874 RTDR3_2_E04.b1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_2_E04_A022 3', mRNA
sequence
Length = 598
Score = 191 bits (411), Expect = 1e-047
Identities = 78/139 (56%), Positives = 105/139 (75%)
Frame = +2 / +3
Query: 140 HVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSS 319
HVKVADFGLSR P +VTHVST PQGTPGYVDP YHQC++LT+KSDVYSFGVVL+E++S+
Sbjct: 12 HVKVADFGLSRFVPLDVTHVSTAPQGTPGYVDPEYHQCFQLTDKSDVYSFGVVLMEIISA 191
Query: 320 KPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQ 499
K AVD+ R+ EI LANMA+ +I+ + +L+DP+L +++ + K + +AELA RCL
Sbjct: 192 KLAVDISRNRREIVLANMAIAKIKAGALHELIDPDLEIDSNSDIKVMVIAIAELALRCLA 371
Query: 500 LERDSRPSMXXVVEALNRI 556
++ RP M +V L +I
Sbjct: 372 ENKEDRPDMKELVAKLEQI 428
Score = 108 bits (231), Expect = 3e-023
Identities = 51/78 (65%), Positives = 56/78 (71%)
Frame = -3 / -1
Query: 375 AMLARLISLWLLPMSTAGLEDTSSTSTTPKLYTSLFSVSL*HWWYTGST*PGVPCGTVDT 196
A+LAR ISL L MSTA L + S TTPKL TS SVS HWWY+GST*PGVPCG V+T
Sbjct: 247 AILARTISLLLRLMSTANLAEMISIKTTPKL*TSDLSVS*KHWWYSGST*PGVPCGAVET 68
Query: 195 WVTSGGYRRDSPKSATFT 142
VTS G +SPKSAT T
Sbjct: 67 *VTSNGTNLESPKSATLT 14
>gb|DR165911.1|DR165911 RTPHOS1_8_C11.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_8_C11_A029 3', mRNA sequence
Length = 682
Score = 181 bits (389), Expect = 1e-044
Identities = 76/129 (58%), Positives = 96/129 (74%)
Frame = +2 / +3
Query: 170 RLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSH 349
RL P + +HV+T+PQGTPGYVDP Y+QCY+LTEKSDVYSFGVVLVE++S+K A+D+ R+
Sbjct: 6 RLVPLDASHVTTIPQGTPGYVDPEYYQCYQLTEKSDVYSFGVVLVEIISAKIAMDITRNR 185
Query: 350 SEINLANMALNRIQNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDSRPSMX 529
EINLAN+A+ +IQ + +LVDP+L E E K + AELAFRCL ERD RP M
Sbjct: 186 REINLANLAITKIQEGDSPELVDPQLEIEVTLEMKVMVRAAAELAFRCLASERDDRPDME 365
Query: 530 XVVEALNRI 556
VV L +I
Sbjct: 366 EVVGQLEKI 392
>gb|DR012634.1|DR012634 HEAT1_14_C07.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_14_C07_A029 3', mRNA sequence
Length = 738
Score = 178 bits (384), Expect = 6e-044
Identities = 73/130 (56%), Positives = 95/130 (73%)
Frame = +2 / +3
Query: 185 EVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINL 364
+ +HV+T+PQGTPGYVDP Y+QCY+LTEKSDVYSFGVVL+E+VS+K A+D+ R+ EINL
Sbjct: 3 DASHVTTIPQGTPGYVDPEYYQCYQLTEKSDVYSFGVVLMEIVSAKIAMDINRNRREINL 182
Query: 365 ANMALNRIQNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDSRPSMXXVVEA 544
AN+A+ +IQ + +L DP+L E + E K + VAELAFRCL ERD RP M VV
Sbjct: 183 ANLAITKIQEGALHELADPQLEIEVNPEVKIMVRAVAELAFRCLASERDDRPDMAEVVAQ 362
Query: 545 LNRIXNGDSL 574
L +I +
Sbjct: 363 LEKIRRSSGM 392
>gb|DR100094.1|DR100094 STRR1_61_D02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_61_D02_A033 5', mRNA sequence
Length = 684
Score = 171 bits (368), Expect = 1e-041
Identities = 73/130 (56%), Positives = 95/130 (73%)
Frame = +2 / +2
Query: 158 FGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDM 337
FGLSRL P E HVST PQGTPGY+DP Y QCY+L++KSDVYSFGVVL+EL+S++ AVD+
Sbjct: 2 FGLSRLVPAEAFHVSTGPQGTPGYLDPDYQQCYRLSDKSDVYSFGVVLLELISAQKAVDI 181
Query: 338 GRSHSEINLANMALNRIQNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDSR 517
R +I LAN+A+++IQ + +LVDP L +++ K + VAELAFRCL E+D R
Sbjct: 182 TREKRDIGLANLAVSKIQCGALHELVDPNLEIDSNPLVKAMVTGVAELAFRCLAYEKDDR 361
Query: 518 PSMXXVVEAL 547
P+M V L
Sbjct: 362 PNMMEVAAQL 391
>gb|CX652228.1|CX652228 COLD1_57_F08.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_57_F08_A029 5', mRNA sequence
Length = 326
Score = 165 bits (355), Expect = 6e-040
Identities = 67/101 (66%), Positives = 83/101 (82%)
Frame = +2 / +3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I H DVK+ NILLD++F+VKVADFGL L P +HV+T PQGTPGYVDP YH+C++LTE
Sbjct: 24 IFHPDVKSANILLDDNFNVKVADFGLCSLVPLNASHVTTAPQGTPGYVDPEYHECFQLTE 203
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQ 391
KSDVYSFGVVLVE++S+K VD+ R EINLA MA+++IQ
Sbjct: 204 KSDVYSFGVVLVEIISAKLPVDINRKRGEINLAFMAMSKIQ 326
>gb|CO361872.1|CO361872 NDL2_7_D07.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_7_D07_A029 5', mRNA sequence
Length = 585
Score = 165 bits (354), Expect = 8e-040
Identities = 67/116 (57%), Positives = 86/116 (74%)
Frame = +2 / -1
Query: 209 PQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRI 388
PQGTPGYVDP Y+ CY++TEKSDVYSFGVVLVE++S+K +D+ R+ EINLAN+A+ +I
Sbjct: 585 PQGTPGYVDPEYYHCYQVTEKSDVYSFGVVLVEIISAKIEMDINRNRREINLANLAVRKI 406
Query: 389 QNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNRI 556
Q + +LVDP+L E + E K ++ VAELAFRCL ERD RP M +V L I
Sbjct: 405 QEGALDELVDPQLEIEVNHEVKMTVSAVAELAFRCLASERDDRPQMEEIVAQLEEI 238
>gb|CF672239.1|CF672239 RTCNT1_62_F12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_62_F12_A029 3', mRNA sequence
Length = 756
Score = 85.8 bits (181), Expect(3) = 1e-031
Identities = 33/76 (43%), Positives = 51/76 (67%)
Frame = +2 / +2
Query: 185 EVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINL 364
+ THV+T +GT GY+DP Y+ LTEKSDVYSFGVVL+E++ +P +D+ ++N+
Sbjct: 116 QATHVTTAVKGTFGYLDPEYYNTQTLTEKSDVYSFGVVLLEIICGRPPIDLKLREEDVNI 295
Query: 365 ANMALNRIQNHEVGQL 412
A I + +VG++
Sbjct: 296 IRWATPYILDDDVGKM 343
Score = 51.5 bits (106), Expect(3) = 1e-031
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2 / +2
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRL 175
+IIHRDVKT NILLD + KVADFGLSR+
Sbjct: 14 KIIHRDVKTANILLDGNLTGKVADFGLSRM 103
Score = 38.6 bits (78), Expect(3) = 1e-031
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / +2
Query: 455 KSIDLVAELAFRCLQLERDSRPSMXXVVEAL 547
+SI VA++A RC+Q+ER SRP M VV L
Sbjct: 386 ESIIRVAKVAMRCVQVERSSRPCMSEVVAEL 478
>gb|DR080092.1|DR080092 RTFEPL1_20_E02.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_20_E02_A029 3', mRNA sequence
Length = 865
Score = 120 bits (257), Expect(2) = 3e-031
Identities = 52/130 (40%), Positives = 79/130 (60%)
Frame = +2 / -1
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRD+K +NIL+DN F+ K++DFGL++L E +H++T GT GYV P Y L
Sbjct: 586 KVVHRDIKASNILIDNEFNGKLSDFGLAKLLRSEKSHITTRVMGTFGYVAPEYANSGLLN 407
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDG 445
EKSD+YSFG++L+E ++ + VD GR E+NL + I + +VDP + +
Sbjct: 406 EKSDIYSFGILLLETITGREPVDYGRPAPEVNLVDWLKMMIGSKRSEDVVDPNMEMKPST 227
Query: 446 ETKKSIDLVA 475
K LVA
Sbjct: 226 RDLKRALLVA 197
Score = 35.4 bits (71), Expect(2) = 3e-031
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / -1
Query: 17 LTWPRRMSIAIETAEALAYLH 79
LTW RM + + TA+ALAYLH
Sbjct: 664 LTWEARMKVILGTAKALAYLH 602
>gb|DT634654.1|DT634654 EST1149585 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG836 3' end, mRNA sequence
Length = 787
Score = 122 bits (260), Expect(2) = 3e-031
Identities = 52/130 (40%), Positives = 82/130 (63%)
Frame = +2 / +2
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRDVK++NILLD ++ KV+DFGL++L PE ++V+T GT GYV P Y L
Sbjct: 305 KVVHRDVKSSNILLDRQWNPKVSDFGLAKLIGPERSYVTTRVMGTFGYVAPEYASTGMLN 484
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDG 445
E+SDVYSFGV+++E++ + VD R +E+NL + + + ++VDP++ +
Sbjct: 485 ERSDVYSFGVLIMEIICGRNPVDYARHANEVNLVDWLKTMVGSRRSDEVVDPKMDVKPSS 664
Query: 446 ETKKSIDLVA 475
K LVA
Sbjct: 665 RALKRALLVA 694
Score = 34.1 bits (68), Expect(2) = 3e-031
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2 / +2
Query: 2 GSERGLTWPRRMSIAIETAEALAYLH 79
G LTW RM I + TA+ LAYLH
Sbjct: 212 GPSSPLTWDIRMKIILGTAKGLAYLH 289
>gb|DR688648.1|DR688648 EST1078733 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC885 3' end, mRNA sequence
Length = 722
Score = 122 bits (260), Expect(2) = 3e-031
Identities = 52/130 (40%), Positives = 82/130 (63%)
Frame = +2 / +3
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRDVK++NILLD ++ KV+DFGL++L PE ++V+T GT GYV P Y L
Sbjct: 297 KVVHRDVKSSNILLDRQWNPKVSDFGLAKLIGPERSYVTTRVMGTFGYVAPEYASTGMLN 476
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDG 445
E+SDVYSFGV+++E++ + VD R +E+NL + + + ++VDP++ +
Sbjct: 477 ERSDVYSFGVLIMEIICGRNPVDYARHANEVNLVDWLKTMVGSRRSDEVVDPKMDVKPSS 656
Query: 446 ETKKSIDLVA 475
K LVA
Sbjct: 657 RALKRALLVA 686
Score = 34.1 bits (68), Expect(2) = 3e-031
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2 / +3
Query: 2 GSERGLTWPRRMSIAIETAEALAYLH 79
G LTW RM I + TA+ LAYLH
Sbjct: 204 GPSSPLTWDIRMKIILGTAKGLAYLH 281
>gb|CO165294.1|CO165294 FLD1_53_D01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_53_D01_A029 5', mRNA sequence
Length = 822
Score = 60.2 bits (125), Expect(5) = 4e-031
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +2 / +2
Query: 242 YHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQL 412
Y+ LTEKSDVYSFGVVL+E++ +P +D+ ++N+ A I + +VG++
Sbjct: 470 YYNTQTLTEKSDVYSFGVVLLEIICGRPPIDLKLREEDVNIIRWATPYILDDDVGKM 640
Score = 51.5 bits (106), Expect(5) = 4e-031
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2 / +2
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRL 175
+IIHRDVKT NILLD + KVADFGLSR+
Sbjct: 119 KIIHRDVKTANILLDGNLTGKVADFGLSRM 208
Score = 38.6 bits (78), Expect(5) = 4e-031
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / +2
Query: 455 KSIDLVAELAFRCLQLERDSRPSMXXVVEAL 547
+SI VA++A RC+Q+ER SRP M VV L
Sbjct: 683 ESIIRVAKVAMRCVQVERSSRPCMSEVVAEL 775
Score = 30.9 bits (61), Expect(5) = 4e-031
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 17 LTWPRRMSIAIETAEALAYLH 79
LTW R+ I ++ A+ L YLH
Sbjct: 41 LTWKTRLKITLDAAQGLEYLH 103
Score = 29.5 bits (58), Expect(5) = 4e-031
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2 / +2
Query: 185 EVTHVSTVPQGTPGYVDP 238
+ THV+T +GT GY+DP
Sbjct: 221 QATHVTTAVKGTFGYLDP 274
>gb|DR182228.1|DR182228 RTMNUT1_43_E02.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_43_E02_A029 5', mRNA sequence
Length = 791
Score = 119 bits (255), Expect(2) = 3e-030
Identities = 53/130 (40%), Positives = 80/130 (61%)
Frame = +2 / +2
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRDVK++NILLD ++ KV+DFGL++L E ++V+T GT GYV P Y L
Sbjct: 188 KVVHRDVKSSNILLDKQWNAKVSDFGLAKLLGSEKSYVTTRVMGTFGYVAPEYASTGMLN 367
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDG 445
E+SDVYSFGV+++E++S + VD GR E+NL + + ++VDP L +
Sbjct: 368 ERSDVYSFGVLIMEIISGRSPVDYGRPAGEVNLVEWLKMMVGSRRSEEVVDPLLEVKPTS 547
Query: 446 ETKKSIDLVA 475
K LV+
Sbjct: 548 RALKRALLVS 577
Score = 33.1 bits (66), Expect(2) = 3e-030
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +2
Query: 17 LTWPRRMSIAIETAEALAYLH 79
LTW RM I + TA+ LAYLH
Sbjct: 110 LTWEIRMKIILGTAKGLAYLH 172
>gb|CX653278.1|CX653278 COLD1_64_C07.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_64_C07_A029 5', mRNA sequence
Length = 755
Score = 118 bits (253), Expect(2) = 6e-030
Identities = 50/114 (43%), Positives = 75/114 (65%)
Frame = +2 / +2
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRDVK++NILLD ++ KV+DFGL++L E ++V+T GT GYV P Y L
Sbjct: 386 KVVHRDVKSSNILLDKQWNAKVSDFGLAKLLGSEKSYVTTRVMGTFGYVAPEYASTGMLN 565
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPEL 427
E+SDVYSFGV+++E++S + VD GR E+NL + + ++VDP L
Sbjct: 566 ERSDVYSFGVLIMEIISGRSPVDYGRPAGEVNLVEWLKMMVGSRRSEEVVDPLL 727
Score = 33.1 bits (66), Expect(2) = 6e-030
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +2
Query: 17 LTWPRRMSIAIETAEALAYLH 79
LTW RM I + TA+ LAYLH
Sbjct: 308 LTWEIRMKIILGTAKGLAYLH 370
>gb|DR052951.1|DR052951 RTCA1_7_H11.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_7_H11_A029 5', mRNA sequence
Length = 803
Score = 75.3 bits (158), Expect(4) = 6e-030
Identities = 32/79 (40%), Positives = 49/79 (62%)
Frame = +2 / +1
Query: 191 THVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLAN 370
TH+ST +GT GY+DP Y + Y+LT KSDVYSFGV+LVE+++ + ++ R E
Sbjct: 361 THISTQVKGTAGYLDPEYLKTYQLTTKSDVYSFGVLLVEMITGRRPIEHRRELRERITVR 540
Query: 371 MALNRIQNHEVGQLVDPEL 427
AL + + +DP++
Sbjct: 541 WALKKFLEGDAILALDPKV 597
Score = 55.1 bits (114), Expect(4) = 6e-030
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +2 / +1
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEV 190
IIHRD+K++NILL +F KVADFG SRL P ++
Sbjct: 253 IIHRDIKSSNILLTENFRAKVADFGFSRLAPEDI 354
Score = 31.3 bits (62), Expect(4) = 6e-030
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2 / +1
Query: 458 SIDLVAELAFRCLQLERDSRPSMXXVVEAL 547
+++ V ELAF+C R RPSM E L
Sbjct: 622 AVEKVLELAFQCTGPSRQDRPSMRKTAEML 711
Score = 25.4 bits (49), Expect(4) = 6e-030
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2 / +1
Query: 32 RMSIAIETAEALAYLH 79
R+ IAI+ A A+ YLH
Sbjct: 187 RLDIAIDVAHAVTYLH 234
>gb|CO175745.1|CO175745 NDL1_56_E08.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_56_E08_A029 5', mRNA sequence
Length = 778
Score = 72.5 bits (152), Expect(3) = 7e-030
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +2 / +2
Query: 185 EVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINL 364
EV+H+ T +GT GY+DP Y LTEKSDVYSFGVVL+E++S + ++ ++NL
Sbjct: 188 EVSHIITTVKGTLGYLDPEYFSTQTLTEKSDVYSFGVVLLEIISGRQPINTKLPGEQLNL 367
Score = 58.8 bits (122), Expect(3) = 7e-030
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +2 / +2
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSR 172
+IIHRD+KT NILLDN+FH K+ADFGLSR
Sbjct: 86 KIIHRDIKTANILLDNNFHGKLADFGLSR 172
Score = 38.2 bits (77), Expect(3) = 7e-030
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2 / +2
Query: 455 KSIDLVAELAFRCLQLERDSRPSMXXVVEAL 547
KSI +VA+LA RC+Q + SRPS VV L
Sbjct: 461 KSIAVVAKLAIRCVQARQSSRPSASEVVAEL 553
>gb|DR099217.1|DR099217 STRR1_54_A11.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_54_A11_A033 3', mRNA sequence
Length = 870
Score = 71.6 bits (150), Expect(4) = 2e-029
Identities = 31/77 (40%), Positives = 47/77 (61%)
Frame = +2 / +3
Query: 185 EVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINL 364
E ++ +T +GT GY+DP Y + LTEKSDVYSFGVVL+E++ ++ + E+NL
Sbjct: 273 EPSYTNTTVKGTIGYLDPDYFRTQMLTEKSDVYSFGVVLLEIICGICPINANLAEEELNL 452
Query: 365 ANMALNRIQNHEVGQLV 415
++ EVG+ V
Sbjct: 453 IQWVKRYVKMDEVGRKV 503
Score = 53.3 bits (110), Expect(4) = 2e-029
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2 / +3
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVS 202
+IIHRDVK+ NILLD + + KV+DFGLSR+ P T+ +
Sbjct: 180 KIIHRDVKSANILLDANMNGKVSDFGLSRISEPSYTNTT 296
Score = 33.6 bits (67), Expect(4) = 2e-029
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2 / +3
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L+W RR+ IA++ A+ L YLH
Sbjct: 102 LSWKRRLKIALDAAQGLEYLH 164
Score = 27.2 bits (53), Expect(4) = 2e-029
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2 / +1
Query: 458 SIDLVAELAFRCLQLERDSRPSMXXVV 538
SI VA +A RC++ RPSM VV
Sbjct: 514 SIIKVARVALRCVEGTPSCRPSMSEVV 594
>gb|DR097941.1|DR097941 STRR1_38_C04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_38_C04_A033 3', mRNA sequence
Length = 854
Score = 119 bits (255), Expect(2) = 3e-029
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +2 / +1
Query: 80 AVEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYK 259
+V IIHRD+K NILLD FH +ADFGL+R +P + +HVST GT GY P Y +
Sbjct: 94 SVRIIHRDIKCANILLDERFHPXIADFGLARFFPEDESHVSTRAGGTRGYTAPEYAVRGQ 273
Query: 260 LTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPEL 427
LTEK+DVYS+G+V++E+VS + +D S L A N++ +VDP L
Sbjct: 274 LTEKADVYSYGIVVLEIVSGRKCIDATLDTSMQILLEWAWKAYANNQALDIVDPTL 441
Score = 29.9 bits (59), Expect(2) = 3e-029
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L+W R +I + TA LAYLH
Sbjct: 22 LSWQSRYNIMVGTARGLAYLH 84
>gb|DR099216.1|DR099216 STRR1_54_A09.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_54_A09_A033 3', mRNA sequence
Length = 720
Score = 109 bits (232), Expect(2) = 3e-029
Identities = 44/81 (54%), Positives = 60/81 (74%)
Frame = +2 / +3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I+HRD+K NILL+ S K++DFG+S+L P+ +H ST +GT GY+DP Y KLT+
Sbjct: 78 IVHRDIKPTNILLNESGQAKLSDFGVSKLIAPDFSHASTEIKGTTGYLDPEYFTVGKLTD 257
Query: 269 KSDVYSFGVVLVELVSSKPAV 331
SDVYSFG+VL+EL+S + AV
Sbjct: 258 ASDVYSFGIVLLELISGQRAV 320
Score = 40.5 bits (82), Expect(2) = 3e-029
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +2 / +3
Query: 389 QNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDSRPSMXXVVEAL 547
Q+ +V LVDP + + +SI +V ++A+ +Q R+ RPSM V+ +
Sbjct: 384 QDPDVRNLVDPRIAAAVEARDLESIKMVLDIAYSSVQPYRNDRPSMVEVLNVI 542
>gb|DR099283.1|DR099283 STRR1_54_A09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_54_A09_A033 5', mRNA sequence
Length = 696
Score = 109 bits (232), Expect(2) = 3e-029
Identities = 44/81 (54%), Positives = 60/81 (74%)
Frame = +2 / +2
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I+HRD+K NILL+ S K++DFG+S+L P+ +H ST +GT GY+DP Y KLT+
Sbjct: 35 IVHRDIKPTNILLNESGQAKLSDFGVSKLIAPDFSHASTEIKGTTGYLDPEYFTVGKLTD 214
Query: 269 KSDVYSFGVVLVELVSSKPAV 331
SDVYSFG+VL+EL+S + AV
Sbjct: 215 ASDVYSFGIVLLELISGQRAV 277
Score = 40.5 bits (82), Expect(2) = 3e-029
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +2 / +2
Query: 389 QNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDSRPSMXXVVEAL 547
Q+ +V LVDP + + +SI +V ++A+ +Q R+ RPSM V+ +
Sbjct: 341 QDPDVRNLVDPRIAAAVEARDLESIKMVLDIAYSSVQPYRNDRPSMVEVLNVI 499
>gb|DR055524.1|DR055524 RTCA1_24_F05.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_24_F05_A029 3', mRNA sequence
Length = 697
Score = 73.0 bits (153), Expect(3) = 3e-029
Identities = 27/60 (45%), Positives = 42/60 (70%)
Frame = +2 / +2
Query: 185 EVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINL 364
+ THV+T +GT GY+DP Y LTEKSDV+SFGVVL+E++ + +D+ + ++N+
Sbjct: 170 KATHVTTAVKGTLGYLDPEYFNTQMLTEKSDVFSFGVVLLEIICGRKPIDLTVAEEDVNI 349
Score = 50.6 bits (104), Expect(3) = 3e-029
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +2 / +2
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSR 172
+IIHRD+KT NILLD++ + K+ADFGLSR
Sbjct: 68 KIIHRDIKTANILLDSNMNGKLADFGLSR 154
Score = 43.7 bits (89), Expect(3) = 3e-029
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2 / +2
Query: 437 TDGETKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNR 553
++G KSI VA++A RC++ E SRPS+ VVE L +
Sbjct: 431 SEGSNMKSITRVAKVAMRCVEAEPSSRPSVSDVVEELKK 547
>gb|DT637288.1|DT637288 EST1152219 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMH187 3' end, mRNA sequence
Length = 772
Score = 113 bits (242), Expect(2) = 4e-029
Identities = 53/129 (41%), Positives = 77/129 (59%)
Frame = +2 / +3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
IIH D+K +N+LLD F +VADFG ++L P THV+ +GT GY+ P Y K +E
Sbjct: 330 IIHGDIKASNVLLDTDFKAQVADFGFAKLIPEGATHVTPRVKGTLGYLAPEYAMWGKASE 509
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDGE 448
DVYSFG++L+ELVS K VD S+++ + + AL + + QL DP+ + + E
Sbjct: 510 GCDVYSFGILLLELVSGKKPVDKMDSNTKYTIVDWALPLVLEGKYDQLADPKFHGKYNEE 689
Query: 449 TKKSIDLVA 475
K + VA
Sbjct: 690 ELKRVVHVA 716
Score = 35.4 bits (71), Expect(2) = 4e-029
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2 / +3
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L W RRM+IAI AE +AYLH
Sbjct: 249 LDWSRRMNIAIGFAEGIAYLH 311
>gb|CV035370.1|CV035370 RTNACL1_15_D03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_15_D03_A029 5', mRNA sequence
Length = 753
Score = 73.9 bits (155), Expect(3) = 5e-029
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = +2 / +3
Query: 191 THVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINL 364
THV+T +GT GYVDP Y LTEKSDVYSFGVVL+E++ + +D+ E+N+
Sbjct: 144 THVTTAVKGTFGYVDPEYFVTQMLTEKSDVYSFGVVLLEIICGRQPIDVKLPTEEVNI 317
Score = 51.0 bits (105), Expect(3) = 5e-029
Identities = 20/30 (66%), Positives = 28/30 (93%)
Frame = +2 / +3
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRL 175
+IIHRDVKT NILLD++++ K+ADFGLS++
Sbjct: 36 KIIHRDVKTANILLDSNWNGKLADFGLSKM 125
Score = 41.8 bits (85), Expect(3) = 5e-029
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +2 / +3
Query: 455 KSIDLVAELAFRCLQLERDSRPSMXXVVEAL 547
KS++LV +LA RC+Q E SRPS+ VVE L
Sbjct: 414 KSVNLVVKLAMRCVQAEPCSRPSVSEVVEEL 506
>gb|CX649748.1|CX649748 COLD1_41_F04.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_41_F04_A029 3', mRNA sequence
Length = 848
Score = 67.5 bits (141), Expect(4) = 7e-029
Identities = 27/60 (45%), Positives = 41/60 (68%)
Frame = +2 / -2
Query: 185 EVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINL 364
E ++V T +GT GY+DP Y + LTEKSDVYSFGVVL+E++ + +++ ++NL
Sbjct: 574 EASYVITSVKGTLGYLDPAYFTTHMLTEKSDVYSFGVVLLEIICGRRPINVKLPGDQLNL 395
Score = 53.8 bits (111), Expect(4) = 7e-029
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +2 / -2
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRL 175
+IIHRD+KT NILLD +F+ K+ADFGLSR+
Sbjct: 676 KIIHRDIKTANILLDKNFNGKLADFGLSRM 587
Score = 33.6 bits (67), Expect(4) = 7e-029
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2 / -2
Query: 458 SIDLVAELAFRCLQLERDSRPSMXXVVEAL 547
SI VA+LA RC+Q E SRPS+ VV L
Sbjct: 298 SIIGVAKLAIRCVQPEPSSRPSVDEVVAKL 209
Score = 28.6 bits (56), Expect(4) = 7e-029
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2 / -2
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L W R+ IA + A+ L YLH
Sbjct: 754 LNWKTRLQIASDAAQGLEYLH 692
>gb|CO201810.1|CO201810 RTCNT2_8_G01.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_8_G01_A029 3', mRNA sequence
Length = 762
Score = 116 bits (249), Expect(2) = 9e-029
Identities = 52/97 (53%), Positives = 69/97 (71%)
Frame = +2 / -1
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+IIHRD+K +NILLD++F KVADFGL++L THVST GT GY+ P Y KLT
Sbjct: 435 KIIHRDIKASNILLDSNFEAKVADFGLAKLASEGFTHVSTRVMGTFGYLAPEYASSGKLT 256
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMA 376
+KSDV+SFGV+L+EL++ + VD S SE +L + A
Sbjct: 255 DKSDVFSFGVMLLELITGRRPVDTTPSFSEDSLVDWA 145
Score = 30.9 bits (61), Expect(2) = 9e-029
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2 / -1
Query: 17 LTWPRRMSIAIETAEALAYLH 79
+ WP R+ IA A LAYLH
Sbjct: 513 MDWPTRLKIATGAARGLAYLH 451
>gb|DR692133.1|DR692133 EST1082221 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADI41 3' end, mRNA sequence
Length = 705
Score = 111 bits (238), Expect(2) = 1e-028
Identities = 49/112 (43%), Positives = 70/112 (62%)
Frame = +2 / +1
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
IIH D+K +N+LLD F +VADFG ++L P THV+ +GT GY+ P Y K +E
Sbjct: 340 IIHGDIKASNVLLDTDFKAQVADFGFAKLIPEGATHVTPRVKGTLGYLAPEYAMWGKASE 519
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPE 424
DVYSFG++L+ELVS K VD S+++ + + AL + + QL DP+
Sbjct: 520 GCDVYSFGILLLELVSGKKPVDKMDSNTKYTIVDWALPLVLEGKYDQLADPK 675
Score = 35.4 bits (71), Expect(2) = 1e-028
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2 / +1
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L W RRM+IAI AE +AYLH
Sbjct: 259 LDWSRRMNIAIGFAEGIAYLH 321
>gb|DT638410.1|DT638410 EST1153341 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHE78 3' end, mRNA sequence
Length = 770
Score = 113 bits (241), Expect(2) = 2e-028
Identities = 46/93 (49%), Positives = 67/93 (72%)
Frame = +2 / +2
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRDVK++NILLD ++ KV+DFGL++L E ++V+T GT GYV P Y L
Sbjct: 419 KVVHRDVKSSNILLDKQWNAKVSDFGLAKLLGSEKSYVTTRVMGTFGYVAPEYASTGMLN 598
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGRSHSEINL 364
E+SDVYSFGV+++E++S + VD GR E+NL
Sbjct: 599 ERSDVYSFGVLIMEIISGRSPVDCGRPAGEVNL 697
Score = 33.1 bits (66), Expect(2) = 2e-028
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +2
Query: 17 LTWPRRMSIAIETAEALAYLH 79
LTW RM I + TA+ LAYLH
Sbjct: 341 LTWEIRMKIILGTAKGLAYLH 403
>gb|DR693856.1|DR693856 EST1083946 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE509 3' end, mRNA sequence
Length = 727
Score = 113 bits (241), Expect(2) = 2e-028
Identities = 46/93 (49%), Positives = 67/93 (72%)
Frame = +2 / +3
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRDVK++NILLD ++ KV+DFGL++L E ++V+T GT GYV P Y L
Sbjct: 411 KVVHRDVKSSNILLDKQWNAKVSDFGLAKLLGSEKSYVTTRVMGTFGYVAPEYASTGMLN 590
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGRSHSEINL 364
E+SDVYSFGV+++E++S + VD GR E+NL
Sbjct: 591 ERSDVYSFGVLIMEIISGRSPVDCGRPAGEVNL 689
Score = 33.1 bits (66), Expect(2) = 2e-028
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 17 LTWPRRMSIAIETAEALAYLH 79
LTW RM I + TA+ LAYLH
Sbjct: 333 LTWEIRMKIILGTAKGLAYLH 395
>gb|CO370117.1|CO370117 RTK1_65_D02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_65_D02_A029 5', mRNA sequence
Length = 785
Score = 74.8 bits (157), Expect(4) = 3e-028
Identities = 29/79 (36%), Positives = 49/79 (62%)
Frame = +2 / +1
Query: 191 THVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLAN 370
TH+ST +GT GY+DP Y + Y+LT+KSDVYSFG++LVE+++ + ++ + E
Sbjct: 259 THISTQVKGTAGYLDPEYLKTYQLTQKSDVYSFGILLVEILTGRRPIEFKKEIEERITIR 438
Query: 371 MALNRIQNHEVGQLVDPEL 427
A ++ +++D L
Sbjct: 439 WAFSKFNGGRATEILDEHL 495
Score = 55.1 bits (114), Expect(4) = 3e-028
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2 / +1
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPE 187
+IIHRDVK++NILL +F KVADFG SR+ P E
Sbjct: 148 QIIHRDVKSSNILLTETFRAKVADFGFSRIGPSE 249
Score = 28.1 bits (55), Expect(4) = 3e-028
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2 / +1
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L P R+ IAI+ A L YLH
Sbjct: 70 LDLPTRLDIAIDVAHGLTYLH 132
Score = 23.1 bits (44), Expect(4) = 3e-028
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2 / +1
Query: 476 ELAFRCLQLERDSRPSMXXVVEAL 547
ELAF+C + RP+M E L
Sbjct: 538 ELAFQCSAPMKSDRPTMKQAGEQL 609
>gb|DT634540.1|DT634540 EST1149471 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG709 3' end, mRNA sequence
Length = 863
Score = 79.9 bits (168), Expect(3) = 4e-028
Identities = 33/79 (41%), Positives = 55/79 (69%)
Frame = +2 / +1
Query: 191 THVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLAN 370
THVST +G+ GY+DP Y + +LTEKSDVYSFGVVL+E++ ++PA++ ++N+A
Sbjct: 268 THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEVLCARPALNPVLPREQVNIAE 447
Query: 371 MALNRIQNHEVGQLVDPEL 427
A++ + + +++D L
Sbjct: 448 WAMHWQKKGMLEKIIDAHL 504
Score = 54.7 bits (113), Expect(3) = 4e-028
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +2 / +1
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYP 181
IIHRDVKT NILLD +F KVADFGLS+ P
Sbjct: 163 IIHRDVKTTNILLDENFVAKVADFGLSKTGP 255
Score = 29.0 bits (57), Expect(3) = 4e-028
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2 / +1
Query: 17 LTWPRRMSIAIETAEALAYLHA 82
L+W +R+ + I A L YLHA
Sbjct: 82 LSWKQRLEVCIGAARGLHYLHA 147
>gb|DR687984.1|DR687984 EST1078067 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABY96 3' end, mRNA sequence
Length = 792
Score = 79.9 bits (168), Expect(3) = 4e-028
Identities = 33/79 (41%), Positives = 55/79 (69%)
Frame = +2 / +2
Query: 191 THVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLAN 370
THVST +G+ GY+DP Y + +LTEKSDVYSFGVVL+E++ ++PA++ ++N+A
Sbjct: 260 THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEVLCARPALNPVLPREQVNIAE 439
Query: 371 MALNRIQNHEVGQLVDPEL 427
A++ + + +++D L
Sbjct: 440 WAMHWQKKGMLEKIIDAHL 496
Score = 54.7 bits (113), Expect(3) = 4e-028
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +2 / +2
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYP 181
IIHRDVKT NILLD +F KVADFGLS+ P
Sbjct: 155 IIHRDVKTTNILLDENFVAKVADFGLSKTGP 247
Score = 29.0 bits (57), Expect(3) = 4e-028
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2 / +2
Query: 17 LTWPRRMSIAIETAEALAYLHA 82
L+W +R+ + I A L YLHA
Sbjct: 74 LSWKQRLEVCIGAARGLHYLHA 139
>gb|DR078348.1|DR078348 RTFEPL1_3_C02.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_3_C02_A029 5', mRNA sequence
Length = 775
Score = 106 bits (227), Expect(2) = 4e-028
Identities = 39/59 (66%), Positives = 51/59 (86%)
Frame = +2 / +1
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+IHRDVK++NILLD + +K+ADFGL RL P + +HV+T+PQGTPGYVDP Y+QCY+LT
Sbjct: 598 MIHRDVKSSNILLDENLDIKLADFGLCRLVPLDASHVTTIPQGTPGYVDPEYYQCYQLT 774
Score = 38.6 bits (78), Expect(2) = 4e-028
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +2 / +1
Query: 17 LTWPRRMSIAIETAEALAYLHAVE 88
L W R++IAI+TA+ALA+LHA++
Sbjct: 520 LPWNSRLNIAIQTAQALAFLHALD 591
>gb|DR081541.1|DR081541 RTFEPL1_30_H10.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_30_H10_A029 3', mRNA sequence
Length = 723
Score = 100 bits (212), Expect(3) = 5e-028
Identities = 44/120 (36%), Positives = 70/120 (58%)
Frame = +2 / +3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
IIHR+VKT+NILLD+ + K+ FGLS + + +GT GY+DP Y+ +T+
Sbjct: 72 IIHRNVKTSNILLDSDMNGKLCGFGLSMMTMDRKAPIEDSVKGTAGYLDPEYYATQYITQ 251
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDGE 448
K+DVYSFGVVL+E + +P +D E +L + ++ +E + + + E DG+
Sbjct: 252 KTDVYSFGVVLLETICGRPPIDFTLPEEERDLLTWVKDYVEINETPEKMVKIIDKEMDGK 431
Score = 34.5 bits (69), Expect(3) = 5e-028
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2 / +3
Query: 455 KSIDLVAELAFRCLQLERDSRPSMXXVVEAL 547
KSI +VA+LA RC++ RPSM VV L
Sbjct: 441 KSITIVAKLALRCVEHTSSWRPSMSEVVGEL 533
Score = 28.6 bits (56), Expect(3) = 5e-028
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / +3
Query: 32 RMSIAIETAEALAYLH 79
R+ IAI+ AEAL YLH
Sbjct: 6 RLKIAIDVAEALQYLH 53
>gb|CX646255.1|CX646255 COLD1_8_F06.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_8_F06_A029 3', mRNA sequence
Length = 836
Score = 68.9 bits (144), Expect(4) = 6e-028
Identities = 26/50 (52%), Positives = 39/50 (78%)
Frame = +2 / -1
Query: 194 HVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGR 343
+VST +GT GY+DP Y +L+EKSDVYSFG+VL+EL++++P + G+
Sbjct: 602 YVSTQVKGTMGYLDPEYFTTLQLSEKSDVYSFGIVLLELITARPPIQGGK 453
Score = 48.7 bits (100), Expect(4) = 6e-028
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +2 / -1
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRL 175
I+HRD+KT NILLD + KVADFGLS+L
Sbjct: 725 IVHRDIKTANILLDANQTAKVADFGLSKL 639
Score = 32.2 bits (64), Expect(4) = 6e-028
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2 / -1
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L W RR+SIA+ +A L YLH
Sbjct: 806 LDWERRVSIALGSARGLTYLH 744
Score = 30.4 bits (60), Expect(4) = 6e-028
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2 / -1
Query: 407 QLVDPELGYETDGETKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNRI 556
+++DP L + +T + LA C++ RPSM VV+ L I
Sbjct: 392 EVMDPLLRKSAEIDTLTGFERFLGLALSCVEESGSERPSMREVVKELESI 243
>gb|DR687970.1|DR687970 EST1078053 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABY79 3' end, mRNA sequence
Length = 840
Score = 112 bits (239), Expect(2) = 8e-028
Identities = 50/116 (43%), Positives = 70/116 (60%)
Frame = +2 / +3
Query: 80 AVEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYK 259
+ IIHRD+K +NILLDNS + K+ DFGL++LY + THV+T GT GY+ P Y
Sbjct: 108 STRIIHRDIKASNILLDNSLNPKIGDFGLAKLYNEKKTHVTTRVAGTVGYLSPEYAMRGH 287
Query: 260 LTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPEL 427
LTEK+DV+SFGVV +ELVS + + + L + + L+DPE+
Sbjct: 288 LTEKADVFSFGVVALELVSGRRNTETSLPQKMVYLLEWTWHLYEQGRPLDLMDPEI 455
Score = 32.2 bits (64), Expect(2) = 8e-028
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L WP R ++ I TA LAYLH
Sbjct: 36 LDWPIRYNVCIGTARGLAYLH 98
>gb|DR098008.1|DR098008 STRR1_38_C04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_38_C04_A033 5', mRNA sequence
Length = 796
Score = 114 bits (244), Expect(2) = 8e-028
Identities = 46/85 (54%), Positives = 62/85 (72%)
Frame = +2 / +3
Query: 80 AVEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYK 259
+V IIHRD+K NILLD FH K+ADFGL+R +P + +HVST GT GY P Y +
Sbjct: 462 SVRIIHRDIKCANILLDERFHPKIADFGLARFFPEDESHVSTRAGGTRGYTAPEYAVRGQ 641
Query: 260 LTEKSDVYSFGVVLVELVSSKPAVD 334
LTEK+DVYS+G+V++E+VS + +D
Sbjct: 642 LTEKADVYSYGIVVLEIVSGRKCID 716
Score = 29.9 bits (59), Expect(2) = 8e-028
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L+W R +I + TA LAYLH
Sbjct: 390 LSWQSRYNIMVGTARGLAYLH 452
>gb|DT634367.1|DT634367 EST1149298 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG521 3' end, mRNA sequence
Length = 762
Score = 112 bits (239), Expect(2) = 8e-028
Identities = 50/116 (43%), Positives = 70/116 (60%)
Frame = +2 / +2
Query: 80 AVEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYK 259
+ IIHRD+K +NILLDNS + K+ DFGL++LY + THV+T GT GY+ P Y
Sbjct: 116 STRIIHRDIKASNILLDNSLNPKIGDFGLAKLYNEKKTHVTTRVAGTVGYLSPEYAMRGH 295
Query: 260 LTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPEL 427
LTEK+DV+SFGVV +ELVS + + + L + + L+DPE+
Sbjct: 296 LTEKADVFSFGVVALELVSGRRNTETSLPQKMVYLLEWTWHLYEQGRPLDLMDPEI 463
Score = 32.2 bits (64), Expect(2) = 8e-028
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L WP R ++ I TA LAYLH
Sbjct: 44 LDWPIRYNVCIGTARGLAYLH 106
>gb|DR017942.1|DR017942 STRS1_19_B04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_19_B04_A034 5', mRNA sequence
Length = 799
Score = 111 bits (238), Expect(2) = 1e-027
Identities = 46/84 (54%), Positives = 63/84 (75%)
Frame = +2 / +2
Query: 83 VEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKL 262
V IIHRD+K NILLD+ F+ K+ADFGL+RL+P THVST GT GY+ P Y +L
Sbjct: 101 VRIIHRDIKCANILLDDRFYPKIADFGLARLFPEGETHVSTKVGGTIGYIAPEYAVHGQL 280
Query: 263 TEKSDVYSFGVVLVELVSSKPAVD 334
+EK+DVYS+G+V++E+VS + +D
Sbjct: 281 SEKADVYSYGIVVLEIVSGRKCLD 352
Score = 32.2 bits (64), Expect(2) = 1e-027
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2 / +2
Query: 8 ERGLTWPRRMSIAIETAEALAYLH 79
E L+W R++I + TA LAYLH
Sbjct: 17 ETTLSWETRLNIIVGTARGLAYLH 88
>dbj|BD267395.1| Compositions isolated from plant cells and utilization of the same in
modifying plant cell signal transduction
Length = 4356
Score = 113 bits (242), Expect(2) = 2e-027
Identities = 49/117 (41%), Positives = 74/117 (63%)
Frame = +2 / +2
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
IIHRDVKT+NILLD++F ++DFG+++ P TH ST GT GY+DP Y + +L E
Sbjct: 3257 IIHRDVKTSNILLDDNFEAHLSDFGIAKCIPSAKTHASTYVMGTIGYIDPEYARTLRLNE 3436
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYET 439
KSDVYS+G+VL+EL++ + VD + ++ L+ N + ++V + ET
Sbjct: 3437 KSDVYSYGIVLLELLTGRKPVDNDSNLHQLILSKADNNMVMETVDPEVVATCIDLET 3607
Score = 29.5 bits (58), Expect(2) = 2e-027
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L W R+ IA+ A+ LAYLH
Sbjct: 3176 LDWNTRLRIALGAAQGLAYLH 3238
>gb|CO165617.1|CO165617 FLD1_55_F11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_55_F11_A029 5', mRNA sequence
Length = 810
Score = 111 bits (236), Expect(2) = 3e-027
Identities = 47/84 (55%), Positives = 60/84 (71%)
Frame = +2 / +3
Query: 83 VEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKL 262
V IIHRD+K NILLD+S K+ADFGL+R +P THVST GT GY P Y +L
Sbjct: 186 VRIIHRDIKCPNILLDDSLQPKIADFGLARFFPESQTHVSTRVGGTIGYTAPEYAVHGQL 365
Query: 263 TEKSDVYSFGVVLVELVSSKPAVD 334
TEK+DVYS+G+V++E+VS + VD
Sbjct: 366 TEKADVYSYGIVVLEIVSGRKCVD 437
Score = 31.8 bits (63), Expect(2) = 3e-027
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L+W R++I + TA LAYLH
Sbjct: 111 LSWEHRLNIIVGTARGLAYLH 173
>gb|DR013519.1|DR013519 HEAT1_19_G02.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_19_G02_A029 5', mRNA sequence
Length = 782
Score = 107 bits (228), Expect(2) = 3e-027
Identities = 41/86 (47%), Positives = 62/86 (72%)
Frame = +2 / +2
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRD+K +NIL+DN F+ K++DFGL++L E +H++T GT GYV P Y L
Sbjct: 521 KVVHRDIKASNILIDNEFNGKLSDFGLAKLLRSEKSHITTRVMGTFGYVAPEYANSGLLN 700
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGR 343
EKSD+YSFG++L+E ++ + VD GR
Sbjct: 701 EKSDIYSFGILLLETITGREPVDYGR 778
Score = 35.4 bits (71), Expect(2) = 3e-027
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / +2
Query: 17 LTWPRRMSIAIETAEALAYLH 79
LTW RM + + TA+ALAYLH
Sbjct: 443 LTWEARMKVILGTAKALAYLH 505
>gb|CX651434.1|CX651434 COLD1_52_H06.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_52_H06_A029 3', mRNA sequence
Length = 689
Score = 115 bits (245), Expect(2) = 3e-027
Identities = 49/114 (42%), Positives = 72/114 (63%)
Frame = +2 / -3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I+HRD+K++NIL+D V+DFGL++L THV+T+ GT GY+ P Y Q + TE
Sbjct: 402 IVHRDIKSSNILIDERLEAHVSDFGLAKLLEDGETHVTTIVAGTLGYLAPEYLQSGRATE 223
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELG 430
KSDVYSFGVVL+EL+S K D + +N+ ++ ++ ++VDP G
Sbjct: 222 KSDVYSFGVVLLELLSGKRPNDPSFMNEGVNVVGWVNTLMRESKLEEIVDPRCG 61
Score = 27.6 bits (54), Expect(2) = 3e-027
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2 / -3
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L W R+ IA+ LAYLH
Sbjct: 483 LNWMARLKIALGAGRGLAYLH 421
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 295,622,563
Number of Sequences: 355925
Number of extensions: 3941288
Number of successful extensions: 48085
Number of sequences better than 1.0e-020: 239
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 8734658490
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)