TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBJ23f06.xg.2.1
(683 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|BD236037.1| Materials and method for modification of pl... 166 1e-040
gb|DR071753.1|DR071753 RTDK1_21_H06.g1_A029 Roots, dark Pin... 157 8e-038
gb|DR688160.1|DR688160 EST1078244 Normalized pine embryo li... 157 8e-038
dbj|BD236038.1| Materials and method for modification of pl... 157 8e-038
dbj|BD236002.1| Materials and method for modification of pl... 154 6e-037
gb|CR354730.1|CR354730 CR354730 Pinus pinaster differenciat... 152 2e-036
dbj|BD236005.1| Materials and method for modification of pl... 151 5e-036
gb|CF390271.1|CF390271 RTDR2_18_E10.g1_A021 Loblolly pine r... 150 7e-036
gb|CF393636.1|CF393636 RTDR3_15_C10.g1_A022 Loblolly pine r... 150 7e-036
gb|CO370469.1|CO370469 RTK1_68_C11.b1_A029 Roots minus pota... 150 7e-036
gb|DR687288.1|DR687288 EST1077369 Normalized pine embryo li... 149 1e-035
gb|DT634092.1|DT634092 EST1149023 Normalized pine embryo li... 149 1e-035
gb|DR118455.1|DR118455 RTMG1_17_C11.b1_A029 Roots minus mag... 148 5e-035
gb|DR387861.1|DR387861 RTHG1_24_D03.g2_A029 Roots plus adde... 148 5e-035
gb|DR047558.1|DR047558 RTBOR1_1_H09.g1_A029 Roots plus adde... 146 1e-034
gb|DR056919.1|DR056919 RTNIT1_1_H10.b1_A029 Roots minus nit... 146 1e-034
gb|DR078956.1|DR078956 RTFEPL1_8_C02.b1_A029 Roots plus add... 146 1e-034
gb|DR691737.1|DR691737 EST1081824 Normalized pine embryo li... 145 2e-034
dbj|BD236034.1| Materials and method for modification of pl... 145 2e-034
gb|DT638197.1|DT638197 EST1153128 Normalized pine embryo li... 95 8e-034
gb|DR693927.1|DR693927 EST1084017 Normalized pine embryo li... 95 8e-034
gb|CF394019.1|CF394019 RTDS2_2_B12.g1_A021 Drought-stressed... 144 8e-034
gb|CF473280.1|CF473280 RTWW2_1_H04.g1_A021 Well-watered lob... 144 8e-034
gb|CF474706.1|CF474706 RTWW2_7_D09.g1_A021 Well-watered lob... 144 8e-034
gb|CO200810.1|CO200810 RTCNT2_1_E08.g1_A029 Root control 2 ... 144 8e-034
gb|DR050495.1|DR050495 RTBOR1_23_H07.g1_A029 Roots plus add... 144 8e-034
gb|DR177124.1|DR177124 RTMNUT1_3_G01.b1_A029 Roots minus mi... 144 8e-034
gb|DR682441.1|DR682441 EST1072516 Normalized pine embryo li... 97 1e-033
gb|DT631114.1|DT631114 EST1146045 Normalized pine embryo li... 97 1e-033
gb|DR021894.1|DR021894 STRS1_47_C06.g1_A034 Shoot tip pitch... 143 2e-033
gb|CF475175.1|CF475175 RTWW2_14_F07.g1_A021 Well-watered lo... 142 3e-033
gb|CO171645.1|CO171645 NDL1_23_A05.g1_A029 Needles control ... 142 3e-033
dbj|BD236003.1| Materials and method for modification of pl... 141 4e-033
gb|DR694455.1|DR694455 EST1084547 Normalized pine embryo li... 94 7e-033
gb|DT638522.1|DT638522 EST1153453 Normalized pine embryo li... 94 7e-033
gb|DR052795.1|DR052795 RTCA1_6_H10.g1_A029 Roots minus calc... 140 8e-033
gb|DR090287.1|DR090287 RTAL1_14_B08.b1_A029 Roots plus adde... 140 8e-033
gb|CF393700.1|CF393700 RTDR3_15_G09.g1_A022 Loblolly pine r... 140 1e-032
gb|CO198975.1|CO198975 GEO1_17_H02.g1_A029 Root gravitropis... 136 2e-031
gb|DR162787.1|DR162787 RTFE1_20_B06.g1_A029 Roots minus iro... 127 1e-028
gb|DR110698.1|DR110698 RTS1_12_A01.g1_A029 Roots minus sulf... 126 1e-028
gb|DR058701.1|DR058701 RTNIT1_13_H07.b1_A029 Roots minus ni... 125 4e-028
gb|DR682092.1|DR682092 EST1072167 Normalized pine embryo li... 123 1e-027
gb|BF518299.1|BF518299 NXSI_037_F05_F NXSI (Nsf Xylem Side ... 120 9e-027
gb|BQ198048.1|BQ198048 NXLV124_G08_F NXLV (Nsf Xylem Late w... 116 1e-025
gb|AL750869.1|AL750869 AL750869 RS Pinus pinaster cDNA clon... 116 2e-025
gb|AL750912.1|AL750912 AL750912 RS Pinus pinaster cDNA clon... 113 1e-024
gb|BG275254.1|BG275254 NXSI_138_F02_F NXSI (Nsf Xylem Side ... 105 2e-022
gb|DR687181.1|DR687181 EST1077260 Normalized pine embryo li... 105 4e-022
gb|DT637075.1|DT637075 EST1152006 Normalized pine embryo li... 104 6e-022
gb|AL750851.1|AL750851 AL750851 RS Pinus pinaster cDNA clon... 102 3e-021
gb|DR089733.1|DR089733 RTAL1_10_B01.g1_A029 Roots plus adde... 100 8e-021
>dbj|BD236037.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 789
Score = 166 bits (357), Expect = 1e-040
Identities = 70/177 (39%), Positives = 112/177 (63%)
Frame = +1 / +1
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
MA++ +PP++ +P +DA LQKAF G+G + +I+IL HR++ QR +I+Q Y Y E+
Sbjct: 73 MATIAVPPSVPSPAEDAEQLQKAFAGWGTNEDLIISILPHRNAAQRKVIRQTYAETYGED 252
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
L + EL+ + ++++LLW LDPA RD + EA T +I C+R+ +L +
Sbjct: 253 LLKALDKELSSDFERSVLLWTLDPAERDAFLSNEATKRLTSSNWVLMEIACTRSSMELFM 432
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYK 573
++Q Y+AR+ LE DI +HT+GD + LL+ RYEGPEV+ T+ +AK L++
Sbjct: 433 VRQAYHARYKKSLEEDIAYHTTGDFRKLLVPLASTFRYEGPEVNMTLARSEAKILHE 603
>gb|DR071753.1|DR071753 RTDK1_21_H06.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_21_H06_A029 5', mRNA sequence
Length = 712
Score = 157 bits (337), Expect = 8e-038
Identities = 66/175 (37%), Positives = 111/175 (63%)
Frame = +1 / +1
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ +P + P +D+ L+KAF+G+G + ++I IL HR + QR +I+Q Y +Y E+
Sbjct: 43 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSYFQLYEED 222
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
L R+ SEL+ + +KA+ LW+LDPA RD + A+ + +I +R+ ++L +
Sbjct: 223 LLKRLESELSSDFEKAVFLWVLDPAERDAVISHGAIKKWNAKNISLLEISSARSSAELLM 402
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDL 567
++Q Y+ R+ LE D+ HTSG+ + LL+A V RYEGPEVD + +++AK L
Sbjct: 403 VRQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEAKKL 567
>gb|DR688160.1|DR688160 EST1078244 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC193 3' end, mRNA sequence
Length = 797
Score = 157 bits (337), Expect = 8e-038
Identities = 66/175 (37%), Positives = 111/175 (63%)
Frame = +1 / +2
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ +P + P +D+ L+KAF+G+G + ++I IL HR + QR +I+Q Y +Y E+
Sbjct: 71 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSYFQLYEED 250
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
L R+ SEL+ + +KA+ LW+LDPA RD + A+ + +I +R+ ++L +
Sbjct: 251 LLKRLESELSSDFEKAVFLWVLDPAERDAVISHGAIKKWNAKNISLLEISSARSSAELLM 430
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDL 567
++Q Y+ R+ LE D+ HTSG+ + LL+A V RYEGPEVD + +++AK L
Sbjct: 431 VRQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEAKKL 595
>dbj|BD236038.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 704
Score = 157 bits (337), Expect = 8e-038
Identities = 66/175 (37%), Positives = 111/175 (63%)
Frame = +1 / +1
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ +P + P +D+ L+KAF+G+G + ++I IL HR + QR +I+Q Y +Y E+
Sbjct: 148 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSYFQLYEED 327
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
L R+ SEL+ + +KA+ LW+LDPA RD + A+ + +I +R+ ++L +
Sbjct: 328 LLKRLESELSSDFEKAVFLWVLDPAERDAVISHGAIKKWNAKNISLLEISSARSSAELLM 507
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDL 567
++Q Y+ R+ LE D+ HTSG+ + LL+A V RYEGPEVD + +++AK L
Sbjct: 508 VRQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEAKKL 672
>dbj|BD236002.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 704
Score = 154 bits (331), Expect = 6e-037
Identities = 66/175 (37%), Positives = 110/175 (62%)
Frame = +1 / +1
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ +P + P +D+ L+KAF+G+G + ++I IL HR + QR +I+Q Y +Y E+
Sbjct: 148 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSYFQLYEED 327
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
L R+ SEL+ + +KA+ LW+LDPA RD + A+ + +I +R+ ++L +
Sbjct: 328 LLKRLESELSSDFEKAVFLWVLDPAERDAVISHGAIKKWNAKNISLLEISSARSSAELLM 507
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDL 567
++Q Y+ R LE D+ HTSG+ + LL+A V RYEGPEVD + +++AK L
Sbjct: 508 VRQAYHIRDKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEAKKL 672
>gb|CR354730.1|CR354730 CR354730 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 125F06, mRNA sequence
Length = 702
Score = 152 bits (327), Expect = 2e-036
Identities = 65/178 (36%), Positives = 108/178 (60%)
Frame = +1 / +1
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ +P +P +D+ L+KAF+G+G + +I IL HR + QR I+Q Y +Y E+
Sbjct: 163 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 342
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
R+ SEL + ++A+LLW LDP RD + E++ + + R+ +I +R+ ++L
Sbjct: 343 FLKRLQSELTRDFERALLLWSLDPPERDALLAHESIKKWSPNNRSLLEISSARSSTELWS 522
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKA 576
++Q Y+ R+ LE D+ HT GD + LL+ V RYEGPEVD + +AK L++A
Sbjct: 523 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSHRYEGPEVDTRLAKSEAKQLHEA 696
>dbj|BD236005.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 2132
Score = 151 bits (324), Expect = 5e-036
Identities = 65/178 (36%), Positives = 108/178 (60%)
Frame = +1 / +2
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ +P +P +D+ L+KAF+G+G + +I IL HR + QR I+Q Y +Y E+
Sbjct: 1373 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 1552
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
R+ SEL + ++A+LLW LDP RD + E++ + + R+ +I +R+ ++L
Sbjct: 1553 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 1732
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKA 576
++Q Y+ R+ LE D+ HT GD + LL+ V RYEGPEVD + +AK L++A
Sbjct: 1733 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKSEAKQLHEA 1906
Score = 117 bits (251), Expect(2) = 4e-031
Identities = 52/143 (36%), Positives = 83/143 (58%)
Frame = +1 / +2
Query: 148 NILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHKKAMLLWILDPAGRDXTVLREA 327
N T + QR I+Q Y +Y E+ R+ SEL + ++A+LLW LDP RD + E+
Sbjct: 413 NFGTQXXAAQRRAIRQTYTQLYEEDFLKRLQSELTRDFERALLLWSLDPPERDALLAYES 592
Query: 328 LSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGI 507
+ + + R+ +I +R+ ++L ++Q Y+ R+ LE D+ HT GD + LL+ V
Sbjct: 593 IKKWSPNNRSLLEISSARSSTELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSS 772
Query: 508 PRYEGPEVDPTIXTHDAKDLYKA 576
RYEGPEVD + +AK L++A
Sbjct: 773 YRYEGPEVDTRLAKSEAKQLHEA 841
Score = 36.8 bits (74), Expect(2) = 4e-031
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1 / +3
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTH 162
M+++ +P +P +D+ L+KAF+G+G + +I IL H
Sbjct: 306 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGH 425
>gb|CF390271.1|CF390271 RTDR2_18_E10.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_18_E10_A021 5', mRNA
sequence
Length = 685
Score = 150 bits (323), Expect = 7e-036
Identities = 65/178 (36%), Positives = 108/178 (60%)
Frame = +1 / +3
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ +P +P +D+ L+KAF+G+G + +I IL HR + QR I+Q Y +Y E+
Sbjct: 129 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 308
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
R+ SEL + ++A+LLW LDP RD + E++ + + R+ +I +R+ ++L
Sbjct: 309 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 488
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKA 576
++Q Y+ R+ LE D+ HT GD + LL+ V RYEGPEVD + +AK L++A
Sbjct: 489 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEA 662
>gb|CF393636.1|CF393636 RTDR3_15_C10.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_15_C10_A022 5', mRNA
sequence
Length = 670
Score = 150 bits (323), Expect = 7e-036
Identities = 65/178 (36%), Positives = 108/178 (60%)
Frame = +1 / +2
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ +P +P +D+ L+KAF+G+G + +I IL HR + QR I+Q Y +Y E+
Sbjct: 23 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 202
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
R+ SEL + ++A+LLW LDP RD + E++ + + R+ +I +R+ ++L
Sbjct: 203 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 382
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKA 576
++Q Y+ R+ LE D+ HT GD + LL+ V RYEGPEVD + +AK L++A
Sbjct: 383 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEA 556
>gb|CO370469.1|CO370469 RTK1_68_C11.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_68_C11_A029 3', mRNA sequence
Length = 858
Score = 150 bits (323), Expect = 7e-036
Identities = 65/178 (36%), Positives = 108/178 (60%)
Frame = +1 / -2
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ +P +P +D+ L+KAF+G+G + +I IL HR + QR I+Q Y +Y E+
Sbjct: 773 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 594
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
R+ SEL + ++A+LLW LDP RD + E++ + + R+ +I +R+ ++L
Sbjct: 593 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 414
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKA 576
++Q Y+ R+ LE D+ HT GD + LL+ V RYEGPEVD + +AK L++A
Sbjct: 413 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEA 240
>gb|DR687288.1|DR687288 EST1077369 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABQ20 3' end, mRNA sequence
Length = 716
Score = 149 bits (321), Expect = 1e-035
Identities = 65/178 (36%), Positives = 107/178 (60%)
Frame = +1 / +3
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ P +P +D+ L+KAF+G+G + +I IL HR + QR I+Q Y +Y E+
Sbjct: 69 MSTIIAPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 248
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
R+ SEL + ++A+LLW LDP RD + E++ + + R+ +I +R+ ++L
Sbjct: 249 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 428
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKA 576
++Q Y+ R+ LE D+ HT GD + LL+ V RYEGPEVD + +AK L++A
Sbjct: 429 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEA 602
>gb|DT634092.1|DT634092 EST1149023 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG217 3' end, mRNA sequence
Length = 752
Score = 149 bits (321), Expect = 1e-035
Identities = 65/178 (36%), Positives = 107/178 (60%)
Frame = +1 / +2
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ P +P +D+ L+KAF+G+G + +I IL HR + QR I+Q Y +Y E+
Sbjct: 77 MSTIIAPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 256
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
R+ SEL + ++A+LLW LDP RD + E++ + + R+ +I +R+ ++L
Sbjct: 257 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 436
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKA 576
++Q Y+ R+ LE D+ HT GD + LL+ V RYEGPEVD + +AK L++A
Sbjct: 437 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEA 610
>gb|DR118455.1|DR118455 RTMG1_17_C11.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_C11_A029 3', mRNA sequence
Length = 891
Score = 148 bits (317), Expect = 5e-035
Identities = 64/176 (36%), Positives = 106/176 (60%)
Frame = +1 / -3
Query: 49 SLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELS 228
++ +P +P +D+ L+KAF+G+G + +I IL HR + QR I+Q Y +Y E+
Sbjct: 862 TIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEEDFL 683
Query: 229 HRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMK 408
R+ SEL + ++A+LLW LDP RD + E++ + + R+ +I +R+ ++L ++
Sbjct: 682 KRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWSVR 503
Query: 409 QTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKA 576
Q Y+ R+ LE D+ HT GD + LL+ V RYEGPEVD + +AK L++A
Sbjct: 502 QAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEA 335
>gb|DR387861.1|DR387861 RTHG1_24_D03.g2_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_24_D03_A029 5', mRNA sequence
Length = 682
Score = 148 bits (317), Expect = 5e-035
Identities = 64/176 (36%), Positives = 106/176 (60%)
Frame = +1 / +3
Query: 49 SLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELS 228
++ +P +P +D+ L+KAF+G+G + +I IL HR + QR I+Q Y +Y E+
Sbjct: 15 TIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEEDFL 194
Query: 229 HRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMK 408
R+ SEL + ++A+LLW LDP RD + E++ + + R+ +I +R+ ++L ++
Sbjct: 195 KRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWSVR 374
Query: 409 QTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKA 576
Q Y+ R+ LE D+ HT GD + LL+ V RYEGPEVD + +AK L++A
Sbjct: 375 QAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEA 542
>gb|DR047558.1|DR047558 RTBOR1_1_H09.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_1_H09_A029 5', mRNA sequence
Length = 698
Score = 146 bits (314), Expect = 1e-034
Identities = 71/187 (37%), Positives = 105/187 (56%)
Frame = +1 / +2
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 68 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRLEKELHGKLE 247
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D RA ++IC+R+ +Q+ +++ Y R+ L+
Sbjct: 248 KAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREAYQKRYQRCLD 427
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXF 624
D+ T+G Q LLLA + R E VD T DAK LY+A E R GTDE F
Sbjct: 428 DDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGTDEDTFIRIF 607
Query: 625 TXRXWAH 645
+ R +H
Sbjct: 608 SERAVSH 628
>gb|DR056919.1|DR056919 RTNIT1_1_H10.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_1_H10_A029 3', mRNA sequence
Length = 736
Score = 146 bits (314), Expect = 1e-034
Identities = 71/187 (37%), Positives = 105/187 (56%)
Frame = +1 / -2
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 630 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRLEKELHGKLE 451
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D RA ++IC+R+ +Q+ +++ Y R+ L+
Sbjct: 450 KAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREAYQKRYQRCLD 271
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXF 624
D+ T+G Q LLLA + R E VD T DAK LY+A E R GTDE F
Sbjct: 270 DDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGTDEDTFIRIF 91
Query: 625 TXRXWAH 645
+ R +H
Sbjct: 90 SERAVSH 70
>gb|DR078956.1|DR078956 RTFEPL1_8_C02.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_8_C02_A029 3', mRNA sequence
Length = 864
Score = 146 bits (314), Expect = 1e-034
Identities = 71/187 (37%), Positives = 105/187 (56%)
Frame = +1 / -1
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 771 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRLEKELHGKLE 592
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D RA ++IC+R+ +Q+ +++ Y R+ L+
Sbjct: 591 KAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREAYQKRYQRCLD 412
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXF 624
D+ T+G Q LLLA + R E VD T DAK LY+A E R GTDE F
Sbjct: 411 DDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGTDEDTFIRIF 232
Query: 625 TXRXWAH 645
+ R +H
Sbjct: 231 SERAVSH 211
>gb|DR691737.1|DR691737 EST1081824 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADC32 3' end, mRNA sequence
Length = 725
Score = 145 bits (312), Expect = 2e-034
Identities = 63/178 (35%), Positives = 106/178 (59%)
Frame = +1 / +3
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ +P +P +D+ L+KAF+G+G + +I IL HR + QR I+Q Y +Y E+
Sbjct: 135 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 314
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
R+ SEL + ++A+LLW LDP RD + E++ + + R+ +I +R+ ++L
Sbjct: 315 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 494
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKA 576
++Q Y+ R+ LE D+ HT GD + LL+ V RYEGPE D + +AK ++A
Sbjct: 495 VRQAYHIRYKKSLEEDVAPHTHGDFRKLLVQLVSSYRYEGPEADTRLAKAEAKQSHEA 668
>dbj|BD236034.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 1293
Score = 145 bits (312), Expect = 2e-034
Identities = 64/177 (36%), Positives = 103/177 (58%)
Frame = +1 / +2
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M++LT+P + D L+ AF G+G + +I+IL HR++ QR LI+Q Y Y E+
Sbjct: 95 MSTLTVPQPLPPVADDCEQLRTAFAGWGTNEKLIISILGHRNAAQRKLIRQTYAETYGED 274
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
L + EL + ++ ++LW LDPA RD + EA T + +I C+R+P QL +
Sbjct: 275 LLKALDRELTNDFERLVVLWSLDPAERDAYLANEATKRWTSSNQVLMEIACTRSPQQLLM 454
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYK 573
+Q Y+AR+ +E D+ HHT+GD + LL+ R +G EV+ T+ +AK L++
Sbjct: 455 ARQAYHARYKKSMEEDVAHHTTGDFRKLLVPLGSSYRNDGDEVNMTLAKAEAKILHE 625
>gb|DT638197.1|DT638197 EST1153128 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHC20 3' end, mRNA sequence
Length = 814
Score = 94.5 bits (200), Expect(2) = 8e-034
Identities = 37/96 (38%), Positives = 63/96 (65%)
Frame = +1 / +3
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ +P + P +D+ L+KAF+G+G + ++I IL HR + QR +I+Q Y +Y E+
Sbjct: 84 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSYFQLYEED 263
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREAL 330
L R+ SEL+ + +KA+ W+LDPA RD + A+
Sbjct: 264 LLKRLESELSSDFEKAVFPWVLDPAERDAVISHGAI 371
Score = 69.3 bits (145), Expect(2) = 8e-034
Identities = 28/68 (41%), Positives = 46/68 (67%)
Frame = +1 / +1
Query: 364 DIICSRTPSQLXIMKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTI 543
+I +R+ ++L +++Q Y+ R+ LE D+ HTSG+ + LL+A V RYEGPEVD +
Sbjct: 403 EISSARSSAELLMVRQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHL 582
Query: 544 XTHDAKDL 567
+++AK L
Sbjct: 583 ASYEAKKL 606
>gb|DR693927.1|DR693927 EST1084017 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE595 3' end, mRNA sequence
Length = 812
Score = 94.5 bits (200), Expect(2) = 8e-034
Identities = 37/96 (38%), Positives = 63/96 (65%)
Frame = +1 / +1
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ +P + P +D+ L+KAF+G+G + ++I IL HR + QR +I+Q Y +Y E+
Sbjct: 76 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSYFQLYEED 255
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREAL 330
L R+ SEL+ + +KA+ W+LDPA RD + A+
Sbjct: 256 LLKRLESELSSDFEKAVFPWVLDPAERDAVISHGAI 363
Score = 69.3 bits (145), Expect(2) = 8e-034
Identities = 28/68 (41%), Positives = 46/68 (67%)
Frame = +1 / +2
Query: 364 DIICSRTPSQLXIMKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTI 543
+I +R+ ++L +++Q Y+ R+ LE D+ HTSG+ + LL+A V RYEGPEVD +
Sbjct: 395 EISSARSSAELLMVRQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHL 574
Query: 544 XTHDAKDL 567
+++AK L
Sbjct: 575 ASYEAKKL 598
>gb|CF394019.1|CF394019 RTDS2_2_B12.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_2_B12_A021 5', mRNA sequence
Length = 726
Score = 144 bits (308), Expect = 8e-034
Identities = 70/183 (38%), Positives = 103/183 (56%)
Frame = +1 / +3
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 90 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRTEIRETYYAMYKEDLCKRLEKELHGKLE 269
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D RA ++IC+R+ +Q+ +++ Y R+ L+
Sbjct: 270 KAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREAYQKRYQRCLD 449
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXF 624
D+ T+G Q LLLA + R E VD T DAK LY+A E R GTDE F
Sbjct: 450 DDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGTDEDTFIRIF 629
Query: 625 TXR 633
+ R
Sbjct: 630 SER 638
>gb|CF473280.1|CF473280 RTWW2_1_H04.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_1_H04_A021 5', mRNA sequence
Length = 685
Score = 144 bits (308), Expect = 8e-034
Identities = 70/183 (38%), Positives = 103/183 (56%)
Frame = +1 / +3
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 75 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRTEIRETYYAMYKEDLCKRLEKELHGKLE 254
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D RA ++IC+R+ +Q+ +++ Y R+ L+
Sbjct: 255 KAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREAYQKRYQRCLD 434
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXF 624
D+ T+G Q LLLA + R E VD T DAK LY+A E R GTDE F
Sbjct: 435 DDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGTDEDTFIRIF 614
Query: 625 TXR 633
+ R
Sbjct: 615 SER 623
>gb|CF474706.1|CF474706 RTWW2_7_D09.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_7_D09_A021 5', mRNA sequence
Length = 695
Score = 144 bits (308), Expect = 8e-034
Identities = 70/183 (38%), Positives = 103/183 (56%)
Frame = +1 / +3
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 72 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRTEIRETYYAMYKEDLCKRLEKELHGKLE 251
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D RA ++IC+R+ +Q+ +++ Y R+ L+
Sbjct: 252 KAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREAYQKRYQRCLD 431
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXF 624
D+ T+G Q LLLA + R E VD T DAK LY+A E R GTDE F
Sbjct: 432 DDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGTDEDTFIRIF 611
Query: 625 TXR 633
+ R
Sbjct: 612 SER 620
>gb|CO200810.1|CO200810 RTCNT2_1_E08.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_1_E08_A029 5', mRNA sequence
Length = 765
Score = 144 bits (308), Expect = 8e-034
Identities = 70/183 (38%), Positives = 103/183 (56%)
Frame = +1 / +3
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 66 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRLEKELHGKLE 245
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D RA ++IC+R+ +Q+ +++ Y R+ L+
Sbjct: 246 KAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREAYQKRYQRCLD 425
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXF 624
D+ T+G Q LLLA + R E VD T DAK LY+A E R GTDE F
Sbjct: 426 DDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGTDEDTFIRIF 605
Query: 625 TXR 633
+ R
Sbjct: 606 SER 614
>gb|DR050495.1|DR050495 RTBOR1_23_H07.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_23_H07_A029 5', mRNA sequence
Length = 724
Score = 144 bits (308), Expect = 8e-034
Identities = 70/183 (38%), Positives = 103/183 (56%)
Frame = +1 / +2
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 50 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRLEKELHGKLE 229
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D RA ++IC+R+ +Q+ +++ Y R+ L+
Sbjct: 230 KAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREAYQKRYQRCLD 409
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXF 624
D+ T+G Q LLLA + R E VD T DAK LY+A E R GTDE F
Sbjct: 410 DDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGTDEDTFIRIF 589
Query: 625 TXR 633
+ R
Sbjct: 590 SER 598
>gb|DR177124.1|DR177124 RTMNUT1_3_G01.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_3_G01_A029 3', mRNA sequence
Length = 697
Score = 144 bits (308), Expect = 8e-034
Identities = 70/183 (38%), Positives = 103/183 (56%)
Frame = +1 / -1
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 601 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRLEKELHGKLE 422
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D RA ++IC+R+ +Q+ +++ Y R+ L+
Sbjct: 421 KAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREAYQKRYQRCLD 242
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXF 624
D+ T+G Q LLLA + R E VD T DAK LY+A E R GTDE F
Sbjct: 241 DDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGTDEDTFIRIF 62
Query: 625 TXR 633
+ R
Sbjct: 61 SER 53
>gb|DR682441.1|DR682441 EST1072516 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA986 3' end, mRNA sequence
Length = 771
Score = 96.8 bits (205), Expect(2) = 1e-033
Identities = 38/96 (39%), Positives = 63/96 (65%)
Frame = +1 / +2
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++T+P + P +D+ L+KA +G+G D ++I IL HR + QR I+Q Y +Y E+
Sbjct: 71 MSTITVPVSTPTPAEDSERLRKAVEGWGTDEKSIIQILGHRTAAQRKFIRQIYFQLYKED 250
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREAL 330
L R+ SEL+ + +KA+ W+LDPA RD + +A+
Sbjct: 251 LLKRLESELSSHFEKAVFRWVLDPAERDAVICHDAI 358
Score = 66.6 bits (139), Expect(2) = 1e-033
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = +1 / +2
Query: 364 DIICSRTPSQLXIMKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTI 543
+I +R+ ++L +++Q Y+ R+ LE D+ H SG+ + LL+A V RYEGPEVD +
Sbjct: 392 EISSARSSAELLMVRQAYHIRYKKSLEEDVAEHISGNFRKLLVALVSSYRYEGPEVDMRL 571
Query: 544 XTHDAKDL 567
+ +AK L
Sbjct: 572 ASSEAKKL 595
>gb|DT631114.1|DT631114 EST1146045 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF513 3' end, mRNA sequence
Length = 763
Score = 96.8 bits (205), Expect(2) = 1e-033
Identities = 38/96 (39%), Positives = 63/96 (65%)
Frame = +1 / +1
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++T+P + P +D+ L+KA +G+G D ++I IL HR + QR I+Q Y +Y E+
Sbjct: 79 MSTITVPVSTPTPAEDSERLRKAVEGWGTDEKSIIQILGHRTAAQRKFIRQIYFQLYKED 258
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREAL 330
L R+ SEL+ + +KA+ W+LDPA RD + +A+
Sbjct: 259 LLKRLESELSSHFEKAVFRWVLDPAERDAVICHDAI 366
Score = 66.6 bits (139), Expect(2) = 1e-033
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = +1 / +1
Query: 364 DIICSRTPSQLXIMKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTI 543
+I +R+ ++L +++Q Y+ R+ LE D+ H SG+ + LL+A V RYEGPEVD +
Sbjct: 400 EISSARSSAELLMVRQAYHIRYKKSLEEDVAEHISGNFRKLLVALVSSYRYEGPEVDMRL 579
Query: 544 XTHDAKDL 567
+ +AK L
Sbjct: 580 ASSEAKKL 603
>gb|DR021894.1|DR021894 STRS1_47_C06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_47_C06_A034 5', mRNA sequence
Length = 738
Score = 143 bits (306), Expect = 2e-033
Identities = 62/164 (37%), Positives = 100/164 (60%)
Frame = +1 / +3
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D+ L+KAF+G+G + +I IL HR + QR I+Q Y +Y E+ R+ SEL + +
Sbjct: 6 EDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEEDFLKRLQSELTRDFE 185
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
+A+LLW LDP RD + E++ + + R+ +I +R+ ++L ++Q Y+ R+ LE
Sbjct: 186 RALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWSVRQAYHIRYKKSLE 365
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKA 576
D+ HT GD + LL+ V RYEGPEVD + +AK L++A
Sbjct: 366 EDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEA 497
>gb|CF475175.1|CF475175 RTWW2_14_F07.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_14_F07_A021 5', mRNA sequence
Length = 684
Score = 142 bits (304), Expect = 3e-033
Identities = 69/183 (37%), Positives = 103/183 (56%)
Frame = +1 / +3
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 54 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRTEIRETYYAMYKEDLCKRLEKELHGKLE 233
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D RA ++IC+R+ +Q+ +++ Y R+ L+
Sbjct: 234 KAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREAYQKRYQRCLD 413
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXF 624
D+ T+G Q LLLA + R E VD T DA+ LY+A E R GTDE F
Sbjct: 414 DDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAEMLYEASEGRCGTDEDTFIRIF 593
Query: 625 TXR 633
+ R
Sbjct: 594 SER 602
>gb|CO171645.1|CO171645 NDL1_23_A05.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_23_A05_A029 5', mRNA sequence
Length = 728
Score = 142 bits (304), Expect = 3e-033
Identities = 69/179 (38%), Positives = 101/179 (56%)
Frame = +1 / +2
Query: 97 DLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHKKAML 276
++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +KA++
Sbjct: 56 EIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRLEKELHGKLEKAIV 235
Query: 277 LWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLEHDIG 456
LW+ +PA RD + AL G D RA ++IC+R+ +Q+ +++ Y R+ L+ D+
Sbjct: 236 LWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREAYQKRYQRCLDDDVI 415
Query: 457 HHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXFTXR 633
T+G Q LLLA + R E VD T DAK LY+A E R GTDE F+ R
Sbjct: 416 CKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGTDEDTFIRIFSER 592
>dbj|BD236003.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 712
Score = 141 bits (303), Expect = 4e-033
Identities = 69/180 (38%), Positives = 101/180 (56%)
Frame = +1 / +1
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 121 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRLEKELHGKLE 300
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D RA ++IC+R+ +Q+ +++ Y R+ L+
Sbjct: 301 KAIVLWMHEPADRDAIIAGTALEGWCTDDRALIEVICTRSSTQIVKIREAYQKRYQRCLD 480
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXF 624
D+ T+G Q LLLA + R E VD DAK LY+AGE R GTDE F
Sbjct: 481 DDVICKTNGPFQKLLLALLKAHRCECKGVDINKARCDAKMLYEAGEGRCGTDEDTFIRIF 660
>gb|DR694455.1|DR694455 EST1084547 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEC67 3' end, mRNA sequence
Length = 837
Score = 94.1 bits (199), Expect(2) = 7e-033
Identities = 37/96 (38%), Positives = 61/96 (63%)
Frame = +1 / +1
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++T+P P +D+ L+KA +G+G D ++I IL HR + QR I+Q Y +Y E+
Sbjct: 157 MSTITVPVPTPTPAEDSERLRKAVEGWGTDEKSIIQILGHRTAAQRKFIRQIYFQLYKED 336
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREAL 330
L R+ SEL+ + +KA+ W+LDPA RD + + +
Sbjct: 337 LLKRLESELSSHFEKAVFRWVLDPAERDAVICHDTI 444
Score = 66.6 bits (139), Expect(2) = 7e-033
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = +1 / +1
Query: 364 DIICSRTPSQLXIMKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTI 543
+I +R+ ++L +++Q Y+ R+ LE D+ H SG+ + LL+A V RYEGPEVD +
Sbjct: 478 EISSARSSAELLMVRQAYHIRYKKSLEEDVAEHISGNFRKLLVALVSSYRYEGPEVDMRL 657
Query: 544 XTHDAKDL 567
+ +AK L
Sbjct: 658 ASSEAKKL 681
>gb|DT638522.1|DT638522 EST1153453 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHG20 3' end, mRNA sequence
Length = 824
Score = 94.1 bits (199), Expect(2) = 7e-033
Identities = 37/96 (38%), Positives = 61/96 (63%)
Frame = +1 / +3
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++T+P P +D+ L+KA +G+G D ++I IL HR + QR I+Q Y +Y E+
Sbjct: 165 MSTITVPVPTPTPAEDSERLRKAVEGWGTDEKSIIQILGHRTAAQRKFIRQIYFQLYKED 344
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREAL 330
L R+ SEL+ + +KA+ W+LDPA RD + + +
Sbjct: 345 LLKRLESELSSHFEKAVFRWVLDPAERDAVICHDTI 452
Score = 66.6 bits (139), Expect(2) = 7e-033
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = +1 / +3
Query: 364 DIICSRTPSQLXIMKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTI 543
+I +R+ ++L +++Q Y+ R+ LE D+ H SG+ + LL+A V RYEGPEVD +
Sbjct: 486 EISSARSSAELLMVRQAYHIRYKKSLEEDVAEHISGNFRKLLVALVSSYRYEGPEVDMRL 665
Query: 544 XTHDAKDL 567
+ +AK L
Sbjct: 666 ASSEAKKL 689
>gb|DR052795.1|DR052795 RTCA1_6_H10.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_6_H10_A029 5', mRNA sequence
Length = 653
Score = 140 bits (301), Expect = 8e-033
Identities = 68/183 (37%), Positives = 102/183 (55%)
Frame = +1 / +1
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 52 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRLEKELHGKLE 231
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D R ++IC+R+ +++ +++ Y R+ L+
Sbjct: 232 KAIVLWMHEPADRDAIIAGSALEGWCTDDRGLIEVICTRSSTRIVKIREAYQKRYQRCLD 411
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXF 624
D+ T+G Q LLLA + R E VD T DAK LY+A E R GTDE F
Sbjct: 412 DDVICKTNGPFQELLLALLKAHRCECQGVDVTKARCDAKMLYEASEGRCGTDEDTFIRIF 591
Query: 625 TXR 633
+ R
Sbjct: 592 SER 600
>gb|DR090287.1|DR090287 RTAL1_14_B08.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_14_B08_A029 3', mRNA sequence
Length = 735
Score = 140 bits (301), Expect = 8e-033
Identities = 69/187 (36%), Positives = 103/187 (55%)
Frame = +1 / -1
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 636 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRLEKELHGKLE 457
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D RA ++IC+R+ +Q+ +++ Y R+ L+
Sbjct: 456 KAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREAYQKRYQRCLD 277
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXF 624
D+ T+G Q LLLA + E VD T DAK LY+ E R GTDE F
Sbjct: 276 DDVICKTNGPFQKLLLALLKAH*CECKGVDITKARCDAKMLYEVSEGRCGTDEDTFIRIF 97
Query: 625 TXRXWAH 645
+ R +H
Sbjct: 96 SERAVSH 76
>gb|CF393700.1|CF393700 RTDR3_15_G09.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_15_G09_A022 5', mRNA
sequence
Length = 785
Score = 140 bits (300), Expect = 1e-032
Identities = 69/183 (37%), Positives = 102/183 (55%)
Frame = +1 / +1
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 88 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRLEKELHGKLE 267
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D A ++IC+R+ +Q+ +++ Y R+ L+
Sbjct: 268 KAIVLWMHEPADRDAIIAGSALEGWCTDDCALIEVICTRSSTQIVKIREAYQKRYQRCLD 447
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXF 624
D+ T+G Q LLLA + R E VD T DAK LY+A E R GTDE F
Sbjct: 448 DDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGTDEDTFIRIF 627
Query: 625 TXR 633
+ R
Sbjct: 628 SER 636
>gb|CO198975.1|CO198975 GEO1_17_H02.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_17_H02_A029 5', mRNA sequence
Length = 612
Score = 136 bits (291), Expect = 2e-031
Identities = 66/171 (38%), Positives = 98/171 (57%)
Frame = +1 / +2
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 98 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRLEKELHGKLE 277
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D RA ++IC+R+ +Q+ +++ Y R+ L+
Sbjct: 278 KAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREAYQKRYQRCLD 457
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGT 597
D+ T+G Q LLLA + R E VD T DAK LY+A E R GT
Sbjct: 458 DDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGT 610
>gb|DR162787.1|DR162787 RTFE1_20_B06.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_20_B06_A029 5', mRNA sequence
Length = 593
Score = 127 bits (271), Expect = 1e-028
Identities = 55/158 (34%), Positives = 94/158 (59%)
Frame = +1 / +1
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ +P +P +D+ L+KAF+G+G + +I IL HR + QR I+Q Y +Y E+
Sbjct: 118 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 297
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
R+ SEL + ++A+LLW LDP RD + E++ + + R+ +I +R+ ++L
Sbjct: 298 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 477
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRY 516
++Q Y+ R+ LE D+ HT GD + LL+ V RY
Sbjct: 478 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRY 591
>gb|DR110698.1|DR110698 RTS1_12_A01.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_12_A01_A029 5', mRNA sequence
Length = 753
Score = 126 bits (270), Expect = 1e-028
Identities = 55/145 (37%), Positives = 87/145 (60%)
Frame = +1 / +2
Query: 142 VINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHKKAMLLWILDPAGRDXTVLR 321
+I IL HR + QR I+Q Y +Y E+ R+ SEL + ++A+LLW LDP RD +
Sbjct: 11 IIEILGHRTAAQRRAIRQTYTQLYEEDFLKRLQSELTRDFERALLLWSLDPPQRDALLAY 190
Query: 322 EALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYV 501
E++ + + R+ +I +R+ ++L ++Q Y+ R+ LE D+ HT GD + LL+ V
Sbjct: 191 ESIKKWSPNNRSLLEISSARSSTELWAVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLV 370
Query: 502 GIPRYEGPEVDPTIXTHDAKDLYKA 576
RYEGPEVD + +AK L++A
Sbjct: 371 SSYRYEGPEVDTRLGKAEAKQLHEA 445
>gb|DR058701.1|DR058701 RTNIT1_13_H07.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_13_H07_A029 3', mRNA sequence
Length = 640
Score = 125 bits (267), Expect = 4e-028
Identities = 61/153 (39%), Positives = 88/153 (57%)
Frame = +1 / -1
Query: 175 QRGLIQQEYRAMYHEELSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLR 354
QR I++ Y AMY E+L R+ EL+G +KA++LW+ +PA RD + AL G D R
Sbjct: 625 QRKEIRETYYAMYKEDLCKRLEKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDR 446
Query: 355 AATDIICSRTPSQLXIMKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVD 534
A ++IC+R+ +Q+ +++ Y R+ L+ D+ T+G Q LLLA + R E VD
Sbjct: 445 ALIEVICTRSSTQIVKIREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVD 266
Query: 535 PTIXTHDAKDLYKAGEXRLGTDEXXXXXXFTXR 633
T DAK LY+A E R GTDE F+ R
Sbjct: 265 ITKARCDAKMLYEASEGRCGTDEDTFIRIFSER 167
>gb|DR682092.1|DR682092 EST1072167 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA667 3' end, mRNA sequence
Length = 770
Score = 123 bits (263), Expect = 1e-027
Identities = 62/189 (32%), Positives = 93/189 (49%)
Frame = +1 / +2
Query: 115 KGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHKKAMLLWILDP 294
KG + +IL R++ QR + + A+Y E++S + +EL GN +KA++LW+ DP
Sbjct: 119 KGIVASKGRLEHILASRNATQRKELGALFHALYKEDISTFLHAELCGNLQKAVVLWMHDP 298
Query: 295 AGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLEHDIGHHTSGD 474
A R + + L D RA T+I+CSRTP+++ +++ Y + LE DI T G
Sbjct: 299 AERVAIIAKTELMSQYPDFRALTEILCSRTPAEILRIREAYRRLYKVCLEEDIAQETVGP 478
Query: 475 HQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGTDEXXXXXXFTXRXWAHXAS 654
HQ LL A R +V+ DAK LY A E R+G DE + R H +
Sbjct: 479 HQKLLFALAKAQRCPSRDVNICQAKCDAKRLYGAREGRIGIDEGAIVKLLSERNLNHLRA 658
Query: 655 XSSAXHHMY 681
Y
Sbjct: 659 AFGCYKQFY 685
>gb|BF518299.1|BF518299 NXSI_037_F05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_037_F05 5' similar to Arabidopsis thaliana
sequence At1g35720 Ca2+-dependent membrane-binding
protein annexin see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 509
Score = 120 bits (257), Expect = 9e-027
Identities = 52/150 (34%), Positives = 90/150 (60%)
Frame = +1 / +3
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++T +P +D+ L+KAF+G+G + +I IL HR + QR I+Q Y +Y E+
Sbjct: 60 MSTITXXAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 239
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
R+ SEL + ++A+LLW LDP RD + E++ + + R+ +I +R+ ++L
Sbjct: 240 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 419
Query: 403 MKQTYYARFGTYLEHDIGHHTSGDHQXLLL 492
++Q Y+ R+ LE D+ HT GD + LL+
Sbjct: 420 VRQAYHIRYKKSLEEDVASHTHGDFRKLLV 509
>gb|BQ198048.1|BQ198048 NXLV124_G08_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV124_G08 5' similar to Arabidopsis thaliana
sequence At1g35720 Ca2+-dependent membrane-binding
protein annexin see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 678
Score = 116 bits (249), Expect = 1e-025
Identities = 60/171 (35%), Positives = 92/171 (53%)
Frame = +1 / +3
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 138 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRLEKELHGKLE 317
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D RA ++IC+R+ +Q+ +++ Y R+ L+
Sbjct: 318 KAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREVYQKRYQRCLD 497
Query: 445 HDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDAKDLYKAGEXRLGT 597
D+ T+G Q LL A + R E VD T A L + GT
Sbjct: 498 DDVICKTNGPFQKLLXALLKAHRCECKGVDLTKARXXAXMLXEXTXXXXGT 650
>gb|AL750869.1|AL750869 AL750869 RS Pinus pinaster cDNA clone RS01C06 similar to FIBER
ANNEXIN, mRNA sequence
Length = 444
Score = 116 bits (247), Expect = 2e-025
Identities = 56/145 (38%), Positives = 82/145 (56%)
Frame = +1 / +1
Query: 199 YRAMYHEELSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICS 378
Y AMY E+L R+ EL+G +KA++LW+ + A RD + R +L G D RA ++IC+
Sbjct: 4 YYAMYKEDLCKRLEKELHGKLEKAVVLWMHEAAERDAIIARTSLEGWRTDDRALIEVICT 183
Query: 379 RTPSQLXIMKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDA 558
R+ +Q+ +++ Y R+ L+ D+ T G +Q LLLA + R E VD DA
Sbjct: 184 RSSTQIVKIREAYQKRYQRCLDDDVFCKTKGPYQKLLLALLKAHRCECKGVDMNKVKCDA 363
Query: 559 KDLYKAGEXRLGTDEXXXXXXFTXR 633
LY+AGE R GTDE F+ R
Sbjct: 364 MLLYEAGEGRCGTDEETFIRIFSER 438
>gb|AL750912.1|AL750912 AL750912 RS Pinus pinaster cDNA clone RS01H05 similar to FIBER
ANNEXIN, mRNA sequence
Length = 408
Score = 113 bits (241), Expect = 1e-024
Identities = 55/135 (40%), Positives = 80/135 (59%)
Frame = +1 / +1
Query: 199 YRAMYHEELSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICS 378
Y AMY E+L R+ EL+G +KA++LW+ + A RD + R +L G D RA ++IC+
Sbjct: 4 YYAMYKEDLCKRLEKELHGKLEKAVVLWMHEAAERDAIIARTSLEGWRTDDRALIEVICT 183
Query: 379 RTPSQLXIMKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDA 558
R+ +Q+ +++ Y R+ L+ D+ T G +Q LLLA + R E VD DA
Sbjct: 184 RSSTQIVKIREAYQKRYQRCLDDDVFCKTKGPYQKLLLALLKAHRCECKGVDMNKXKCDA 363
Query: 559 KDLYKAGEXRLGTDE 603
LY+AGE R GTDE
Sbjct: 364 MLLYEAGEGRCGTDE 408
>gb|BG275254.1|BG275254 NXSI_138_F02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_138_F02 5' similar to Arabidopsis thaliana
sequence At1g35720 Ca2+-dependent membrane-binding
protein annexin see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 541
Score = 105 bits (225), Expect = 2e-022
Identities = 48/136 (35%), Positives = 76/136 (55%)
Frame = +1 / +3
Query: 85 QDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEELSHRISSELNGNHK 264
+D ++ A KG G D +I IL ++ QR I++ Y AMY E+L R+ EL+G +
Sbjct: 84 RDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRLEKELHGKLE 263
Query: 265 KAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXIMKQTYYARFGTYLE 444
KA++LW+ +PA RD + AL G D RA ++IC+ +Q+ +++ Y R+ L+
Sbjct: 264 KAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTXXSTQIVKIREAYQKRYQRCLD 443
Query: 445 HDIGHHTSGDHQXLLL 492
D T+G Q L L
Sbjct: 444 DDXXCKTNGPFQKLXL 491
>gb|DR687181.1|DR687181 EST1077260 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABO37 3' end, mRNA sequence
Length = 366
Score = 105 bits (223), Expect = 4e-022
Identities = 45/121 (37%), Positives = 73/121 (60%)
Frame = +1 / +2
Query: 199 YRAMYHEELSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICS 378
Y +Y E+L R+ SEL+ + +KA+ LW+L PA RD + A+ + I +
Sbjct: 2 YFQLYEEDLLKRLESELSSDFEKAVFLWVLHPAERDAVISHGAIKKWNAKNISLLQISSA 181
Query: 379 RTPSQLXIMKQTYYARFGTYLEHDIGHHTSGDHQXLLLAYVGIPRYEGPEVDPTIXTHDA 558
R+ ++L +++Q Y+ R+ LE D+ HTSG+ + LL+A V RYEGPEVD + +++A
Sbjct: 182 RSSAELLMVRQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEA 361
Query: 559 K 561
K
Sbjct: 362 K 364
>gb|DT637075.1|DT637075 EST1152006 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGZ42 3' end, mRNA sequence
Length = 549
Score = 104 bits (222), Expect = 6e-022
Identities = 45/134 (33%), Positives = 81/134 (60%)
Frame = +1 / +2
Query: 43 MASLTLPPAMANPRQDAIDLQKAFKGFGCDSTTVINILTHRDSVQRGLIQQEYRAMYHEE 222
M+++ +P +P +D+ L+KAF+G+G + +I IL HR + QR I+Q Y +Y E+
Sbjct: 143 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 322
Query: 223 LSHRISSELNGNHKKAMLLWILDPAGRDXTVLREALSGDTMDLRAATDIICSRTPSQLXI 402
R+ SEL + ++A+LLW LDP RD + E++ + + R+ +I +R+ ++L
Sbjct: 323 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 502
Query: 403 MKQTYYARFGTYLE 444
++Q Y+ R+ LE
Sbjct: 503 VRQAYHIRYKKSLE 544
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 325,457,102
Number of Sequences: 355925
Number of extensions: 4208917
Number of successful extensions: 27303
Number of sequences better than 1.0e-020: 58
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 9435587875
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)