TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAY3d01.yg.3.1
(808 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX677864.1|BX677864 BX677864 RN Pinus pinaster cDNA clon... 47 5e-013
gb|DR070769.1|DR070769 RTDK1_15_A12.g1_A029 Roots, dark Pin... 51 7e-010
gb|DR069510.1|DR069510 RTDK1_7_E03.g1_A029 Roots, dark Pinu... 51 9e-010
gb|CF393796.1|CF393796 RTDS2_1_A09.g1_A021 Drought-stressed... 59 1e-009
gb|DR072092.1|DR072092 RTDK1_24_C01.b1_A029 Roots, dark Pin... 56 1e-009
gb|DR018098.1|DR018098 STRS1_20_B02.g1_A034 Shoot tip pitch... 58 9e-008
gb|DR058244.1|DR058244 RTNIT1_10_D11.g1_A029 Roots minus ni... 57 1e-007
gb|DR101661.1|DR101661 STRR1_74_H08.g1_A033 Stem Response R... 57 1e-007
gb|CV032381.1|CV032381 RTNACL1_7_E11.g2_A029 Roots plus add... 57 2e-007
gb|DR018800.1|DR018800 STRS1_25_F10.g1_A034 Shoot tip pitch... 57 2e-007
gb|DR019214.1|DR019214 STRS1_28_B10.g1_A034 Shoot tip pitch... 57 2e-007
gb|DR022846.1|DR022846 STRS1_53_H02.g1_A034 Shoot tip pitch... 57 2e-007
gb|DR093702.1|DR093702 STRR1_9_H07.g1_A033 Stem Response Re... 57 2e-007
gb|DR096264.1|DR096264 STRR1_26_G07.g1_A033 Stem Response R... 57 2e-007
gb|DR166107.1|DR166107 RTPHOS1_9_B02.g2_A029 Roots minus ph... 57 2e-007
gb|DR745597.1|DR745597 RTCU1_30_F12.g1_A029 Roots plus adde... 57 2e-007
gb|CF396043.1|CF396043 RTDS2_20_H11.g1_A021 Drought-stresse... 57 2e-007
gb|DR016741.1|DR016741 STRS1_11_H07.g1_A034 Shoot tip pitch... 56 4e-007
gb|DR016499.1|DR016499 STRS1_10_B04.g1_A034 Shoot tip pitch... 55 6e-007
gb|DR053220.1|DR053220 RTCA1_9_F01.g1_A029 Roots minus calc... 55 6e-007
gb|CF398688.1|CF398688 RTDS3_13_E09.g1_A022 Drought-stresse... 55 8e-007
gb|DR112029.1|DR112029 RTS1_25_H03.b1_A029 Roots minus sulf... 55 8e-007
gb|DR159768.1|DR159768 RTFE1_1_A05.g1_A029 Roots minus iron... 55 8e-007
gb|DR167963.1|DR167963 RTPHOS1_22_F11.b1_A029 Roots minus p... 40 1e-006
gb|CV036480.1|CV036480 RTNACL1_59_C04.g1_A029 Roots plus ad... 54 2e-006
gb|CX652210.1|CX652210 COLD1_57_E02.g1_A029 Root cold Pinus... 53 2e-006
gb|CF394913.1|CF394913 RTDS2_8_B10.g1_A021 Drought-stressed... 37 3e-006
gb|AI813131.1|AI813131 23C8 Pine Lambda Zap Xylem library P... 52 4e-006
gb|DR101585.1|DR101585 STRR1_74_H08.b1_A033 Stem Response R... 52 5e-006
gb|CF385822.1|CF385822 RTDR1_6_B10.g1_A015 Loblolly pine ro... 51 7e-006
gb|CV032305.1|CV032305 RTNACL1_7_E11.b1_A029 Roots plus add... 51 7e-006
gb|DR016909.1|DR016909 STRS1_12_H07.g1_A034 Shoot tip pitch... 51 7e-006
gb|DR022130.1|DR022130 STRS1_49_C03.b1_A034 Shoot tip pitch... 51 7e-006
gb|DR090596.1|DR090596 RTAL1_16_D11.b1_A029 Roots plus adde... 51 7e-006
gb|DR096182.1|DR096182 STRR1_26_G07.b1_A033 Stem Response R... 51 7e-006
gb|CF396189.1|CF396189 RTDS2_15_H11.g1_A021 Drought-stresse... 51 1e-005
gb|CF664000.1|CF664000 RTCNT1_6_C08.g1_A029 Root control Pi... 51 1e-005
gb|CO176070.1|CO176070 NDL1_59_A09.g1_A029 Needles control ... 51 1e-005
gb|CO200922.1|CO200922 RTCNT2_2_A11.g1_A029 Root control 2 ... 51 1e-005
gb|CV031628.1|CV031628 RTNACL1_2_F02.g1_A029 Roots plus add... 51 1e-005
gb|CV036407.1|CV036407 RTNACL1_59_C04.b1_A029 Roots plus ad... 51 1e-005
gb|CX649229.1|CX649229 COLD1_33_G12.g1_A029 Root cold Pinus... 51 1e-005
gb|CX715235.1|CX715235 RTPQ1_32_E11.g1_A032 Roots treated w... 51 1e-005
gb|DR683582.1|DR683582 EST1073658 Normalized pine embryo li... 51 1e-005
gb|DT631534.1|DT631534 EST1146465 Normalized pine embryo li... 51 1e-005
gb|CF386022.1|CF386022 RTDR1_7_D01.g1_A015 Loblolly pine ro... 51 1e-005
gb|CF386305.1|CF386305 RTDR1_13_C02.g1_A015 Loblolly pine r... 51 1e-005
gb|CF386779.1|CF386779 RTDR1_16_C09.g1_A015 Loblolly pine r... 51 1e-005
gb|CF387232.1|CF387232 RTDR1_11_C09.g1_A015 Loblolly pine r... 51 1e-005
gb|CF387750.1|CF387750 RTDR1_19_B06.g1_A015 Loblolly pine r... 51 1e-005
gb|CF389476.1|CF389476 RTDR2_7_H06.g1_A021 Loblolly pine ro... 51 1e-005
gb|CF390625.1|CF390625 RTDR2_20_F04.g1_A021 Loblolly pine r... 51 1e-005
gb|CF395697.1|CF395697 RTDS2_16_E10.g1_A021 Drought-stresse... 51 1e-005
gb|CF400161.1|CF400161 RTWW1_3_H09.g1_A015 Well-watered lob... 51 1e-005
gb|CF401147.1|CF401147 RTWW1_10_H05.g1_A015 Well-watered lo... 51 1e-005
gb|CF401702.1|CF401702 RTWW1_14_F02.g1_A015 Well-watered lo... 51 1e-005
gb|CF402882.1|CF402882 RTWW1_23_C07.g1_A015 Well-watered lo... 51 1e-005
gb|CF403088.1|CF403088 RTWW1_24_H08.g1_A015 Well-watered lo... 51 1e-005
gb|CF474770.1|CF474770 RTWW2_7_D07.g1_A021 Well-watered lob... 51 1e-005
gb|CF475375.1|CF475375 RTWW2_13_G10.g1_A021 Well-watered lo... 51 1e-005
gb|CF475645.1|CF475645 RTWW2_11_A07.g1_A021 Well-watered lo... 51 1e-005
gb|CF477607.1|CF477607 RTWW3_8_E05.g1_A022 Well-watered lob... 51 1e-005
gb|CF478690.1|CF478690 RTWW3_16_E10.g1_A022 Well-watered lo... 51 1e-005
gb|CF479481.1|CF479481 RTWW3_22_E07.g1_A022 Well-watered lo... 51 1e-005
gb|CF668355.1|CF668355 RTCNT1_36_B02.b1_A029 Root control P... 51 1e-005
gb|CO198810.1|CO198810 GEO1_16_F03.g1_A029 Root gravitropis... 51 1e-005
gb|CO200019.1|CO200019 GEO2_5_A04.b1_A032 Root gravitropism... 51 1e-005
gb|CO200029.1|CO200029 GEO2_5_B04.b1_A032 Root gravitropism... 51 1e-005
gb|CO200100.1|CO200100 GEO2_5_A04.g1_A032 Root gravitropism... 51 1e-005
gb|CO200175.1|CO200175 GEO2_5_G12.g1_A032 Root gravitropism... 51 1e-005
gb|CV031655.1|CV031655 RTNACL1_2_H05.g1_A029 Roots plus add... 51 1e-005
gb|CX647479.1|CX647479 COLD1_16_E12.g1_A029 Root cold Pinus... 51 1e-005
gb|CX712480.1|CX712480 RTPQ1_2_F09.g2_A032 Roots treated wi... 51 1e-005
gb|CX712493.1|CX712493 RTPQ1_2_G11.g2_A032 Roots treated wi... 51 1e-005
gb|DR050422.1|DR050422 RTBOR1_23_H08.b1_A029 Roots plus add... 51 1e-005
gb|DR058962.1|DR058962 RTNIT1_14_H10.g1_A029 Roots minus ni... 51 1e-005
gb|DR069420.1|DR069420 RTDK1_7_E03.b1_A029 Roots, dark Pinu... 51 1e-005
gb|DR070690.1|DR070690 RTDK1_15_A12.b1_A029 Roots, dark Pin... 51 1e-005
gb|DR079085.1|DR079085 RTFEPL1_9_B01.b1_A029 Roots plus add... 51 1e-005
gb|DR079160.1|DR079160 RTFEPL1_9_B01.g1_A029 Roots plus add... 51 1e-005
gb|DR111152.1|DR111152 RTS1_15_E12.g1_A029 Roots minus sulf... 51 1e-005
gb|DR168384.1|DR168384 RTPHOS1_25_C08.b1_A029 Roots minus p... 51 1e-005
gb|DR742155.1|DR742155 RTCU1_2_D01.b1_A029 Roots plus added... 51 1e-005
gb|DR742298.1|DR742298 RTCU1_3_D02.b1_A029 Roots plus added... 51 1e-005
gb|CF477216.1|CF477216 RTWW3_6_F07.g1_A022 Well-watered lob... 50 2e-005
gb|CF477289.1|CF477289 RTWW3_6_C04.g1_A022 Well-watered lob... 50 2e-005
gb|CF478525.1|CF478525 RTWW3_20_C04.g1_A022 Well-watered lo... 50 2e-005
gb|CF479675.1|CF479675 RTWW3_11_E11.g1_A022 Well-watered lo... 50 2e-005
gb|DR688709.1|DR688709 EST1078794 Normalized pine embryo li... 50 2e-005
gb|DT635168.1|DT635168 EST1150099 Normalized pine embryo li... 50 2e-005
gb|CX715896.1|CX715896 RTPQ1_37_E09.g1_A032 Roots treated w... 40 2e-005
gb|CO369206.1|CO369206 RTK1_45_D07.g1_A029 Roots minus pota... 49 4e-005
gb|CO173029.1|CO173029 NDL1_33_C02.g1_A029 Needles control ... 49 5e-005
gb|DR692403.1|DR692403 EST1082491 Normalized pine embryo li... 35 5e-005
gb|DR682364.1|DR682364 EST1072439 Normalized pine embryo li... 35 5e-005
gb|DR113064.1|DR113064 RTS1_32_F04.g1_A029 Roots minus sulf... 48 7e-005
gb|CF400472.1|CF400472 RTWW1_5_C03.g1_A015 Well-watered lob... 35 9e-005
gb|CO173859.1|CO173859 NDL1_39_H04.g1_A029 Needles control ... 48 9e-005
gb|CO174700.1|CO174700 NDL1_45_E10.g1_A029 Needles control ... 48 9e-005
gb|CV034552.1|CV034552 RTNACL1_9_H12.g1_A029 Roots plus add... 48 9e-005
gb|CV035131.1|CV035131 RTNACL1_13_G03.g1_A029 Roots plus ad... 48 9e-005
gb|DR069528.1|DR069528 RTDK1_7_F10.g1_A029 Roots, dark Pinu... 48 9e-005
gb|DR092503.1|DR092503 STRR1_1_F08.g1_A033 Stem Response Re... 48 9e-005
gb|DR743660.1|DR743660 RTCU1_17_H06.b1_A029 Roots plus adde... 48 9e-005
gb|CF665807.1|CF665807 RTCNT1_18_D01.g1_A029 Root control P... 47 1e-004
gb|DR078833.1|DR078833 RTFEPL1_7_D07.b1_A029 Roots plus add... 46 2e-004
gb|DR021146.1|DR021146 STRS1_42_D06.g1_A034 Shoot tip pitch... 46 2e-004
gb|CX648630.1|CX648630 COLD1_29_H09.g1_A029 Root cold Pinus... 35 2e-004
gb|CX648309.1|CX648309 COLD1_27_G06.g1_A029 Root cold Pinus... 45 2e-004
gb|CF402929.1|CF402929 RTWW1_23_A11.g1_A015 Well-watered lo... 45 2e-004
gb|CF387399.1|CF387399 RTDR1_12_D01.g1_A015 Loblolly pine r... 45 2e-004
gb|CF395414.1|CF395414 RTDS2_11_D01.g1_A021 Drought-stresse... 45 2e-004
gb|CF395842.1|CF395842 RTDS2_17_A02.g1_A021 Drought-stresse... 45 2e-004
gb|CO158624.1|CO158624 FLD1_8_D01.b1_A029 Root flooded Pinu... 45 2e-004
gb|CF402305.1|CF402305 RTWW1_19_D12.g1_A015 Well-watered lo... 45 2e-004
gb|CO158614.1|CO158614 FLD1_8_C01.b1_A029 Root flooded Pinu... 45 2e-004
gb|DR072729.1|DR072729 RTDK1_28_F01.b1_A029 Roots, dark Pin... 45 2e-004
gb|BG039592.1|BG039592 NXSI_100_H02_F NXSI (Nsf Xylem Side ... 47 2e-004
gb|CF386831.1|CF386831 RTDR1_9_D01.b1_A015 Loblolly pine ro... 47 2e-004
gb|CO363443.1|CO363443 RTK1_9_F08.g1_A029 Roots minus potas... 47 2e-004
gb|CO364083.1|CO364083 RTK1_13_C10.g1_A029 Roots minus pota... 47 2e-004
gb|DR057948.1|DR057948 RTNIT1_8_F07.g1_A029 Roots minus nit... 47 2e-004
gb|DR110432.1|DR110432 RTS1_10_G10.g1_A029 Roots minus sulf... 35 2e-004
gb|DR387160.1|DR387160 RTHG1_19_H02.g1_A029 Roots plus adde... 35 2e-004
gb|DR164431.1|DR164431 RTFE1_48_H05.g1_A029 Roots minus iro... 35 2e-004
gb|CO366298.1|CO366298 RTK1_27_B10.b1_A029 Roots minus pota... 35 2e-004
gb|CX646481.1|CX646481 COLD1_9_D05.g1_A029 Root cold Pinus ... 35 2e-004
gb|DT638793.1|DT638793 EST1153724 Normalized pine embryo li... 35 2e-004
gb|CF402337.1|CF402337 RTWW1_19_G09.g1_A015 Well-watered lo... 36 2e-004
gb|BF608989.1|BF608989 NXSI_039_B05_F NXSI (Nsf Xylem Side ... 46 2e-004
gb|CF401287.1|CF401287 RTWW1_11_E07.g1_A015 Well-watered lo... 46 2e-004
gb|CV032541.1|CV032541 RTNACL1_8_G10.g1_A029 Roots plus add... 46 2e-004
gb|CF387208.1|CF387208 RTDR1_11_A03.g1_A015 Loblolly pine r... 44 3e-004
gb|DT636699.1|DT636699 EST1151630 Normalized pine embryo li... 46 3e-004
gb|CF664416.1|CF664416 RTCNT1_9_D05.g1_A029 Root control Pi... 44 3e-004
gb|DR053823.1|DR053823 RTCA1_13_C03.g1_A029 Roots minus cal... 44 4e-004
gb|DR163899.1|DR163899 RTFE1_45_D04.g1_A029 Roots minus iro... 44 4e-004
gb|CF387216.1|CF387216 RTDR1_11_G01.g1_A015 Loblolly pine r... 44 4e-004
gb|DR743685.1|DR743685 RTCU1_17_C02.g1_A029 Roots plus adde... 44 4e-004
gb|CV036263.1|CV036263 RTNACL1_57_H11.g1_A029 Roots plus ad... 44 4e-004
gb|CF388365.1|CF388365 RTDR2_2_H08.g1_A021 Loblolly pine ro... 44 4e-004
gb|DR742204.1|DR742204 RTCU1_2_B03.g1_A029 Roots plus added... 44 4e-004
gb|CF387199.1|CF387199 RTDR1_11_F05.g1_A015 Loblolly pine r... 44 4e-004
gb|DR089483.1|DR089483 RTAL1_9_B01.b1_A029 Roots plus added... 44 4e-004
gb|DN456289.1|DN456289 EST952088 Sequencing ESTs from loblo... 34 5e-004
gb|CF479617.1|CF479617 RTWW3_11_C12.b1_A022 Well-watered lo... 46 5e-004
gb|DR182052.1|DR182052 RTMNUT1_42_D02.g1_A029 Roots minus m... 44 5e-004
gb|DT626447.1|DT626447 EST1158371 Sequencing ESTs from lobl... 34 5e-004
gb|DN464830.1|DN464830 EST960629 Sequencing ESTs from loblo... 34 5e-004
gb|CV136936.1|CV136936 EST848145 Sequencing ESTs from loblo... 34 5e-004
gb|DN460915.1|DN460915 EST956714 Sequencing ESTs from loblo... 34 6e-004
gb|DT627111.1|DT627111 EST1160187 Sequencing ESTs from lobl... 34 6e-004
gb|CO365814.1|CO365814 RTK1_19_H09.b1_A029 Roots minus pota... 43 6e-004
gb|DR744138.1|DR744138 RTCU1_20_A08.g1_A029 Roots plus adde... 36 6e-004
gb|DR053427.1|DR053427 RTCA1_11_B12.b1_A029 Roots minus cal... 36 6e-004
gb|CO409072.1|CO409072 EST839457 Sequencing ESTs from loblo... 45 6e-004
gb|CO409603.1|CO409603 EST839988 Sequencing ESTs from loblo... 45 6e-004
gb|CO413999.1|CO413999 EST844384 Sequencing ESTs from loblo... 45 6e-004
gb|CO414116.1|CO414116 EST844501 Sequencing ESTs from loblo... 45 6e-004
gb|DN446164.1|DN446164 EST941963 Sequencing ESTs from loblo... 45 6e-004
gb|DN447561.1|DN447561 EST943360 Sequencing ESTs from loblo... 45 6e-004
gb|DN447717.1|DN447717 EST943516 Sequencing ESTs from loblo... 45 6e-004
gb|DT625981.1|DT625981 EST1157905 Sequencing ESTs from lobl... 45 6e-004
gb|DT624502.1|DT624502 EST1158789 Sequencing ESTs from lobl... 45 6e-004
gb|DR167567.1|DR167567 RTPHOS1_19_D07.g1_A029 Roots minus p... 38 8e-004
gb|DR058916.1|DR058916 RTNIT1_14_D09.g1_A029 Roots minus ni... 42 8e-004
gb|CO170645.1|CO170645 NDL1_15_G04.g1_A029 Needles control ... 45 9e-004
gb|CO172267.1|CO172267 NDL1_28_C10.g1_A029 Needles control ... 45 9e-004
gb|CX652138.1|CX652138 COLD1_57_E02.b1_A029 Root cold Pinus... 45 9e-004
gb|CF402750.1|CF402750 RTWW1_22_H01.g1_A015 Well-watered lo... 42 0.001
gb|DR179233.1|DR179233 RTMNUT1_16_G08.g1_A029 Roots minus m... 42 0.001
gb|CF387738.1|CF387738 RTDR1_19_B05.g1_A015 Loblolly pine r... 42 0.001
gb|CV138710.1|CV138710 EST849919 Sequencing ESTs from loblo... 32 0.001
gb|DN447649.1|DN447649 EST943448 Sequencing ESTs from loblo... 32 0.001
gb|CO413464.1|CO413464 EST843849 Sequencing ESTs from loblo... 32 0.001
gb|CO411223.1|CO411223 EST841608 Sequencing ESTs from loblo... 32 0.001
gb|CX650706.1|CX650706 COLD1_47_C05.g1_A029 Root cold Pinus... 32 0.001
gb|CF396532.1|CF396532 RTDS2_22_G01.g1_A021 Drought-stresse... 32 0.001
gb|DR088948.1|DR088948 RTAL1_5_D08.g1_A029 Roots plus added... 42 0.001
gb|CF402897.1|CF402897 RTWW1_23_G03.g1_A015 Well-watered lo... 44 0.001
gb|CO367187.1|CO367187 RTK1_32_E12.g1_A029 Roots minus pota... 44 0.001
gb|CF399303.1|CF399303 RTDS3_27_G05.g1_A022 Drought-stresse... 44 0.002
gb|CO174881.1|CO174881 NDL1_46_H02.g1_A029 Needles control ... 44 0.002
gb|DR072746.1|DR072746 RTDK1_28_G07.b1_A029 Roots, dark Pin... 44 0.002
gb|DR079919.1|DR079919 RTFEPL1_18_E03.g1_A029 Roots plus ad... 44 0.002
gb|DR388826.1|DR388826 RTHG1_30_E06.g1_A029 Roots plus adde... 44 0.002
gb|DN465657.1|DN465657 EST961456 Sequencing ESTs from loblo... 32 0.002
gb|CX715189.1|CX715189 RTPQ1_32_F12.b1_A032 Roots treated w... 32 0.002
gb|DR011995.1|DR011995 HEAT1_9_H04.b1_A029 Root at 37 C for... 43 0.002
gb|DR118501.1|DR118501 RTMG1_17_H12.b1_A029 Roots minus mag... 43 0.002
gb|DR118584.1|DR118584 RTMG1_17_H12.g1_A029 Roots minus mag... 43 0.002
gb|DR118658.1|DR118658 RTMG1_18_H12.b1_A029 Roots minus mag... 43 0.002
gb|DR118746.1|DR118746 RTMG1_18_H12.g1_A029 Roots minus mag... 43 0.002
gb|DR118981.1|DR118981 RTMG1_20_H12.b1_A029 Roots minus mag... 43 0.002
gb|DR119066.1|DR119066 RTMG1_20_H12.g1_A029 Roots minus mag... 43 0.002
gb|DR161882.1|DR161882 RTFE1_14_B01.g1_A029 Roots minus iro... 43 0.002
gb|DR743995.1|DR743995 RTCU1_19_C02.g1_A029 Roots plus adde... 43 0.002
gb|DR090135.1|DR090135 RTAL1_12_H09.g1_A029 Roots plus adde... 34 0.002
gb|CF385521.1|CF385521 RTDR1_4_C11.g1_A015 Loblolly pine ro... 41 0.003
gb|CO167733.1|CO167733 FLD1_70_G05.g1_A029 Root flooded Pin... 32 0.003
gb|DR024514.1|DR024514 STRS1_65_B08.g1_A034 Shoot tip pitch... 32 0.003
gb|DN630871.1|DN630871 EST981687 Subtracted pine embryo lib... 40 0.003
gb|CF391226.1|CF391226 RTDR3_4_B07.g1_A022 Loblolly pine ro... 40 0.003
gb|DR691467.1|DR691467 EST1081554 Normalized pine embryo li... 32 0.003
gb|DR024032.1|DR024032 STRS1_61_G01.g1_A034 Shoot tip pitch... 43 0.003
gb|DR092321.1|DR092321 RTAL1_28_A09.g1_A029 Roots plus adde... 43 0.003
gb|DR384323.1|DR384323 RTHG1_1_B07.g1_A029 Roots plus added... 43 0.003
gb|DR386863.1|DR386863 RTHG1_17_H07.g1_A029 Roots plus adde... 43 0.003
gb|DR687863.1|DR687863 EST1077946 Normalized pine embryo li... 43 0.003
gb|DT634605.1|DT634605 EST1149536 Normalized pine embryo li... 43 0.003
gb|CO161283.1|CO161283 FLD1_27_F12.g1_A029 Root flooded Pin... 32 0.004
gb|CF389311.1|CF389311 RTDR2_9_E01.g1_A021 Loblolly pine ro... 32 0.004
gb|DN611622.1|DN611622 EST964672 Subtracted pine embryo lib... 40 0.004
gb|DN612925.1|DN612925 EST965975 Subtracted pine embryo lib... 40 0.004
gb|CF388826.1|CF388826 RTDR2_15_B06.g1_A021 Loblolly pine r... 42 0.004
gb|DT635992.1|DT635992 EST1150923 Normalized pine embryo li... 42 0.004
gb|DR048401.1|DR048401 RTBOR1_8_D10.g2_A029 Roots plus adde... 32 0.005
gb|DR110062.1|DR110062 RTS1_7_C01.g1_A029 Roots minus sulfu... 42 0.006
gb|DR110065.1|DR110065 RTS1_7_D01.g1_A029 Roots minus sulfu... 42 0.006
gb|DN609357.1|DN609357 EST962407 Subtracted pine embryo lib... 40 0.007
gb|DN609962.1|DN609962 EST963012 Subtracted pine embryo lib... 40 0.007
gb|DN615268.1|DN615268 EST968318 Subtracted pine embryo lib... 40 0.008
gb|DN613726.1|DN613726 EST966776 Subtracted pine embryo lib... 40 0.008
gb|CF472227.1|CF472227 RTDS1_5_A07.g1_A015 Drought-stressed... 41 0.008
gb|DN611492.1|DN611492 EST964542 Subtracted pine embryo lib... 40 0.008
gb|DN611066.1|DN611066 EST964116 Subtracted pine embryo lib... 40 0.008
gb|DN612193.1|DN612193 EST965243 Subtracted pine embryo lib... 40 0.008
gb|DN612318.1|DN612318 EST965368 Subtracted pine embryo lib... 40 0.009
gb|CF402020.1|CF402020 RTWW1_16_E06.g1_A015 Well-watered lo... 30 0.012
gb|DR058444.1|DR058444 RTNIT1_11_G06.g1_A029 Roots minus ni... 39 0.013
gb|DR691711.1|DR691711 EST1081798 Normalized pine embryo li... 35 0.014
gb|AW010092.1|AW010092 PC01E12 Pine TriplEx pollen cone lib... 40 0.015
gb|DR092493.1|DR092493 STRR1_1_E09.g1_A033 Stem Response Re... 34 0.016
gb|CO362977.1|CO362977 RTK1_6_H07.g1_A029 Roots minus potas... 32 0.016
gb|DR685172.1|DR685172 EST1075249 Normalized pine embryo li... 34 0.016
gb|DR686589.1|DR686589 EST1076667 Normalized pine embryo li... 34 0.017
gb|BQ696984.1|BQ696984 NXPV_047_G08_F NXPV (Nsf Xylem Plani... 32 0.017
gb|DR686698.1|DR686698 EST1076776 Normalized pine embryo li... 34 0.018
gb|DT633746.1|DT633746 EST1148677 Normalized pine embryo li... 34 0.018
gb|DR685708.1|DR685708 EST1075785 Normalized pine embryo li... 34 0.018
gb|DT638925.1|DT638925 EST1153856 Normalized pine embryo li... 34 0.019
gb|DT633089.1|DT633089 EST1148020 Normalized pine embryo li... 34 0.020
gb|BI643919.1|BI643919 NXPV_129_D01_F NXPV (Nsf Xylem Plani... 40 0.021
gb|CF399458.1|CF399458 RTDS3_28_E07.g1_A022 Drought-stresse... 40 0.021
gb|CF474105.1|CF474105 RTWW2_18_E09.g1_A021 Well-watered lo... 40 0.021
gb|CO367235.1|CO367235 RTK1_33_C05.b1_A029 Roots minus pota... 40 0.021
gb|DR012991.1|DR012991 HEAT1_16_G06.b1_A029 Root at 37 C fo... 40 0.021
gb|DR694371.1|DR694371 EST1084463 Normalized pine embryo li... 35 0.022
gb|DR089679.1|DR089679 RTAL1_10_E01.b1_A029 Roots plus adde... 33 0.022
gb|DT638520.1|DT638520 EST1153451 Normalized pine embryo li... 35 0.022
gb|BG039309.1|BG039309 NXSI_097_F06_F NXSI (Nsf Xylem Side ... 32 0.023
gb|DN609443.1|DN609443 EST962493 Subtracted pine embryo lib... 40 0.029
gb|DN610609.1|DN610609 EST963659 Subtracted pine embryo lib... 40 0.029
gb|CF479186.1|CF479186 RTWW3_24_F01.g1_A022 Well-watered lo... 34 0.030
gb|CV138036.1|CV138036 EST849245 Sequencing ESTs from loblo... 32 0.040
gb|DT626593.1|DT626593 EST1158517 Sequencing ESTs from lobl... 32 0.040
gb|DR161057.1|DR161057 RTFE1_9_C11.g1_A029 Roots minus iron... 37 0.044
gb|DR112215.1|DR112215 RTS1_26_D08.g1_A029 Roots minus sulf... 39 0.054
gb|DR687221.1|DR687221 EST1077301 Normalized pine embryo li... 32 0.060
gb|DR049120.1|DR049120 RTBOR1_13_B07.g1_A029 Roots plus add... 38 0.075
gb|CF399969.1|CF399969 RTWW1_2_A06.b1_A015 Well-watered lob... 38 0.10
gb|DN615660.1|DN615660 EST968710 Subtracted pine embryo lib... 38 0.10
gb|DR099996.1|DR099996 STRR1_60_F05.g1_A033 Stem Response R... 38 0.10
gb|BG039595.1|BG039595 NXSI_100_H03_F NXSI (Nsf Xylem Side ... 38 0.10
gb|BX677417.1|BX677417 BX677417 RN Pinus pinaster cDNA clon... 32 0.10
gb|DR014779.1|DR014779 HEAT1_51_C11.g1_A029 Root at 37 C fo... 35 0.17
gb|DN610343.1|DN610343 EST963393 Subtracted pine embryo lib... 37 0.19
gb|DN611420.1|DN611420 EST964470 Subtracted pine embryo lib... 37 0.19
gb|DN611648.1|DN611648 EST964698 Subtracted pine embryo lib... 37 0.19
gb|AW754830.1|AW754830 PC06A10 Pine TriplEx pollen cone lib... 36 0.27
gb|CO409041.1|CO409041 EST839426 Sequencing ESTs from loblo... 36 0.27
gb|CO414076.1|CO414076 EST844461 Sequencing ESTs from loblo... 36 0.27
gb|DN446228.1|DN446228 EST942027 Sequencing ESTs from loblo... 36 0.27
gb|DN608969.1|DN608969 EST962019 Subtracted pine embryo lib... 36 0.27
gb|DN609537.1|DN609537 EST962587 Subtracted pine embryo lib... 36 0.27
gb|DN609994.1|DN609994 EST963044 Subtracted pine embryo lib... 36 0.27
gb|DN610198.1|DN610198 EST963248 Subtracted pine embryo lib... 36 0.27
gb|DN610349.1|DN610349 EST963399 Subtracted pine embryo lib... 36 0.27
gb|DN610453.1|DN610453 EST963503 Subtracted pine embryo lib... 36 0.27
gb|DN610828.1|DN610828 EST963878 Subtracted pine embryo lib... 36 0.27
gb|DN611548.1|DN611548 EST964598 Subtracted pine embryo lib... 36 0.27
gb|DN611633.1|DN611633 EST964683 Subtracted pine embryo lib... 36 0.27
gb|DN611896.1|DN611896 EST964946 Subtracted pine embryo lib... 36 0.27
gb|DN612338.1|DN612338 EST965388 Subtracted pine embryo lib... 36 0.27
gb|DN612614.1|DN612614 EST965664 Subtracted pine embryo lib... 36 0.27
gb|DN613477.1|DN613477 EST966527 Subtracted pine embryo lib... 36 0.27
gb|DN613564.1|DN613564 EST966614 Subtracted pine embryo lib... 36 0.27
gb|DN613578.1|DN613578 EST966628 Subtracted pine embryo lib... 36 0.27
gb|DN613579.1|DN613579 EST966629 Subtracted pine embryo lib... 36 0.27
gb|DN613887.1|DN613887 EST966937 Subtracted pine embryo lib... 36 0.27
gb|DN615124.1|DN615124 EST968174 Subtracted pine embryo lib... 36 0.27
gb|DN615587.1|DN615587 EST968637 Subtracted pine embryo lib... 36 0.27
gb|DN626417.1|DN626417 EST977233 Subtracted pine embryo lib... 36 0.27
gb|DN627160.1|DN627160 EST977976 Subtracted pine embryo lib... 36 0.27
gb|DN629087.1|DN629087 EST979903 Subtracted pine embryo lib... 36 0.27
gb|DN629328.1|DN629328 EST980144 Subtracted pine embryo lib... 36 0.27
gb|DN630632.1|DN630632 EST981448 Subtracted pine embryo lib... 36 0.27
gb|DN631882.1|DN631882 EST982698 Subtracted pine embryo lib... 36 0.27
gb|DN634428.1|DN634428 EST985244 Subtracted pine embryo lib... 36 0.27
gb|DN634432.1|DN634432 EST985248 Subtracted pine embryo lib... 36 0.27
gb|DR688925.1|DR688925 EST1079011 Normalized pine embryo li... 36 0.27
gb|DR689913.1|DR689913 EST1079999 Normalized pine embryo li... 36 0.27
gb|DR691406.1|DR691406 EST1081493 Normalized pine embryo li... 36 0.27
gb|DR692991.1|DR692991 EST1083079 Normalized pine embryo li... 36 0.27
gb|DT624327.1|DT624327 EST1158602 Sequencing ESTs from lobl... 36 0.27
gb|DT636006.1|DT636006 EST1150937 Normalized pine embryo li... 36 0.27
gb|AW011459.1|AW011459 ST21A06 Pine TriplEx shoot tip libra... 36 0.37
gb|CO199971.1|CO199971 GEO2_4_D12.g1_A032 Root gravitropism... 36 0.37
gb|CO370297.1|CO370297 RTK1_67_A09.b1_A029 Roots minus pota... 36 0.37
gb|CV034239.1|CV034239 RTNACL1_39_C12.g1_A029 Roots plus ad... 36 0.37
gb|DR050766.1|DR050766 RTBOR1_25_C04.g1_A029 Roots plus add... 36 0.37
gb|DR054191.1|DR054191 RTCA1_15_F12.g1_A029 Roots minus cal... 36 0.37
gb|DR081685.1|DR081685 RTFEPL1_31_B03.g1_A029 Roots plus ad... 36 0.37
gb|DR384247.1|DR384247 RTHG1_1_B07.b1_A029 Roots plus added... 36 0.37
gb|DR689807.1|DR689807 EST1079893 Normalized pine embryo li... 36 0.37
gb|DR691279.1|DR691279 EST1081365 Normalized pine embryo li... 36 0.37
gb|DT633427.1|DT633427 EST1148358 Normalized pine embryo li... 36 0.37
dbj|BD236520.1| Materials and method for modification of pl... 36 0.37
dbj|BD236523.1| Materials and method for modification of pl... 36 0.37
dbj|BD236524.1| Materials and method for modification of pl... 36 0.37
gb|AW010521.1|AW010521 ST07G04 Pine TriplEx shoot tip libra... 35 0.50
gb|CF401853.1|CF401853 RTWW1_15_G05.g1_A015 Well-watered lo... 35 0.50
gb|CO366379.1|CO366379 RTK1_27_B10.g1_A029 Roots minus pota... 35 0.50
gb|DN464223.1|DN464223 EST960022 Sequencing ESTs from loblo... 35 0.50
gb|DR068729.1|DR068729 RTDK1_2_C05.g1_A029 Roots, dark Pinu... 35 0.50
gb|DR089313.1|DR089313 RTAL1_7_H09.g1_A029 Roots plus added... 35 0.50
gb|DR102869.1|DR102869 STRR1_84_E03.g1_A033 Stem Response R... 35 0.50
gb|DR110341.1|DR110341 RTS1_10_G10.b1_A029 Roots minus sulf... 35 0.50
gb|DR387088.1|DR387088 RTHG1_19_H02.b1_A029 Roots plus adde... 35 0.50
gb|DT627501.1|DT627501 EST1160577 Sequencing ESTs from lobl... 35 0.50
gb|DN627129.1|DN627129 EST977945 Subtracted pine embryo lib... 33 0.64
gb|DN629261.1|DN629261 EST980077 Subtracted pine embryo lib... 33 0.64
gb|DN630005.1|DN630005 EST980821 Subtracted pine embryo lib... 33 0.64
gb|DN627626.1|DN627626 EST978442 Subtracted pine embryo lib... 33 0.65
gb|DN628861.1|DN628861 EST979677 Subtracted pine embryo lib... 33 0.65
gb|DN631578.1|DN631578 EST982394 Subtracted pine embryo lib... 33 0.65
gb|AI812904.1|AI812904 22C9 Pine Lambda Zap Xylem library P... 35 0.69
gb|AW981961.1|AW981961 PC22A08 Pine TriplEx pollen cone lib... 35 0.69
gb|CF385712.1|CF385712 RTDR1_5_B10.g1_A015 Loblolly pine ro... 35 0.69
gb|CO157899.1|CO157899 FLD1_2_H12.g1_A029 Root flooded Pinu... 35 0.69
gb|CV032520.1|CV032520 RTNACL1_8_E08.g1_A029 Roots plus add... 35 0.69
gb|CV135562.1|CV135562 EST846771 Sequencing ESTs from loblo... 35 0.69
gb|CX645399.1|CX645399 COLD1_2_B06.g1_A029 Root cold Pinus ... 35 0.69
gb|DN610816.1|DN610816 EST963866 Subtracted pine embryo lib... 35 0.69
gb|DR056997.1|DR056997 RTNIT1_1_H08.g1_A029 Roots minus nit... 35 0.69
gb|DR689315.1|DR689315 EST1079401 Normalized pine embryo li... 35 0.69
gb|DR689464.1|DR689464 EST1079550 Normalized pine embryo li... 35 0.69
gb|DR694281.1|DR694281 EST1084372 Normalized pine embryo li... 35 0.69
gb|DR695228.1|DR695228 EST1085321 Normalized pine embryo li... 35 0.69
gb|DT626342.1|DT626342 EST1158266 Sequencing ESTs from lobl... 35 0.69
gb|DT635677.1|DT635677 EST1150608 Normalized pine embryo li... 35 0.69
gb|DR181370.1|DR181370 RTMNUT1_38_B03.g2_A029 Roots minus m... 32 0.82
gb|CF385097.1|CF385097 RTDR1_1_A09.g1_A015 Loblolly pine ro... 32 0.89
gb|DR056578.1|DR056578 RTCA1_31_E11.b1_A029 Roots minus cal... 32 0.94
gb|CF392562.1|CF392562 RTDR3_6_C05.g1_A022 Loblolly pine ro... 35 0.95
gb|CF397352.1|CF397352 RTDS3_3_B05.b2_A022 Drought-stressed... 35 0.95
gb|CF477206.1|CF477206 RTWW3_6_A04.g1_A022 Well-watered lob... 35 0.95
gb|CF669732.1|CF669732 RTCNT1_45_E10.g1_A029 Root control P... 35 0.95
gb|CO162037.1|CO162037 FLD1_32_F12.g1_A029 Root flooded Pin... 35 0.95
gb|CO170258.1|CO170258 NDL1_12_F04.g1_A029 Needles control ... 35 0.95
gb|DR682460.1|DR682460 EST1072535 Normalized pine embryo li... 35 0.95
gb|DR683572.1|DR683572 EST1073648 Normalized pine embryo li... 35 0.95
gb|DR684087.1|DR684087 EST1074164 Normalized pine embryo li... 35 0.95
gb|DR686320.1|DR686320 EST1076398 Normalized pine embryo li... 35 0.95
gb|DR691288.1|DR691288 EST1081375 Normalized pine embryo li... 35 0.95
gb|DR692533.1|DR692533 EST1082621 Normalized pine embryo li... 35 0.95
gb|DT627752.1|DT627752 EST1156501 Subtracted pine embryo li... 35 0.95
gb|DT631130.1|DT631130 EST1146061 Normalized pine embryo li... 35 0.95
gb|DT637246.1|DT637246 EST1152177 Normalized pine embryo li... 35 0.95
gb|DR069811.1|DR069811 RTDK1_9_C09.g1_A029 Roots, dark Pinu... 31 1.0
gb|CF471464.1|CF471464 RTDS1_3_B01.g1_A015 Drought-stressed... 32 1.0
gb|CF402277.1|CF402277 RTWW1_19_H09.g1_A015 Well-watered lo... 32 1.2
gb|AW754518.1|AW754518 PC03B02 Pine TriplEx pollen cone lib... 34 1.3
gb|BQ197521.1|BQ197521 NXLV116_E12_F NXLV (Nsf Xylem Late w... 34 1.3
gb|CO158694.1|CO158694 FLD1_8_D01.g1_A029 Root flooded Pinu... 34 1.3
gb|CO369127.1|CO369127 RTK1_45_D04.b1_A029 Roots minus pota... 34 1.3
gb|DN611528.1|DN611528 EST964578 Subtracted pine embryo lib... 34 1.3
gb|DN626513.1|DN626513 EST977329 Subtracted pine embryo lib... 34 1.3
gb|DR100516.1|DR100516 STRR1_64_F05.g1_A033 Stem Response R... 34 1.3
gb|DR167161.1|DR167161 RTPHOS1_17_C11.b1_A029 Roots minus p... 34 1.3
gb|DR386779.1|DR386779 RTHG1_17_H07.b1_A029 Roots plus adde... 34 1.3
gb|DR388015.1|DR388015 RTHG1_25_D10.g1_A029 Roots plus adde... 34 1.3
gb|DR681810.1|DR681810 EST1071885 Normalized pine embryo li... 34 1.3
gb|DR682674.1|DR682674 EST1072749 Normalized pine embryo li... 34 1.3
gb|DR690184.1|DR690184 EST1080270 Normalized pine embryo li... 34 1.3
gb|DR693411.1|DR693411 EST1083499 Normalized pine embryo li... 34 1.3
gb|DR694399.1|DR694399 EST1084491 Normalized pine embryo li... 34 1.3
gb|DR694970.1|DR694970 EST1085063 Normalized pine embryo li... 34 1.3
gb|DT636000.1|DT636000 EST1150931 Normalized pine embryo li... 34 1.3
gb|DT638028.1|DT638028 EST1152959 Normalized pine embryo li... 34 1.3
gb|DT638666.1|DT638666 EST1153597 Normalized pine embryo li... 34 1.3
gb|CV033509.1|CV033509 RTNACL1_35_A08.b1_A029 Roots plus ad... 32 1.3
gb|DR181968.1|DR181968 RTMNUT1_42_D02.b1_A029 Roots minus m... 32 1.3
gb|AW754521.1|AW754521 PC03B05 Pine TriplEx pollen cone lib... 34 1.8
gb|AW758714.1|AW758714 NXNV_086_E02_F Nsf Xylem Normal wood... 34 1.8
gb|BE607136.1|BE607136 NXCI_037_B11_F NXCI (Nsf Xylem Compr... 34 1.8
gb|BX678759.1|BX678759 BX678759 RS Pinus pinaster cDNA clon... 34 1.8
gb|CO198937.1|CO198937 GEO1_17_D01.g1_A029 Root gravitropis... 34 1.8
gb|DN462472.1|DN462472 EST958271 Sequencing ESTs from loblo... 34 1.8
gb|DN608830.1|DN608830 EST961880 Subtracted pine embryo lib... 34 1.8
gb|DR692420.1|DR692420 EST1082508 Normalized pine embryo li... 34 1.8
gb|DR693722.1|DR693722 EST1083812 Normalized pine embryo li... 34 1.8
gb|DR744186.1|DR744186 RTCU1_20_F04.g1_A029 Roots plus adde... 34 1.8
gb|DT627104.1|DT627104 EST1160180 Sequencing ESTs from lobl... 34 1.8
gb|DT637123.1|DT637123 EST1152054 Normalized pine embryo li... 34 1.8
gb|CF474885.1|CF474885 RTWW2_8_F11.g1_A021 Well-watered lob... 33 2.5
gb|CF474899.1|CF474899 RTWW2_8_C07.g1_A021 Well-watered lob... 33 2.5
gb|DN448196.1|DN448196 EST943995 Sequencing ESTs from loblo... 33 2.5
gb|DN448318.1|DN448318 EST944117 Sequencing ESTs from loblo... 33 2.5
gb|DR683523.1|DR683523 EST1073599 Normalized pine embryo li... 33 2.5
gb|DR684428.1|DR684428 EST1074505 Normalized pine embryo li... 33 2.5
gb|DT626557.1|DT626557 EST1158481 Sequencing ESTs from lobl... 33 2.5
gb|DT624306.1|DT624306 EST1158581 Sequencing ESTs from lobl... 33 2.5
gb|DT632093.1|DT632093 EST1147024 Normalized pine embryo li... 33 2.5
gb|CF400946.1|CF400946 RTWW1_9_F06.b1_A015 Well-watered lob... 28 3.2
gb|CF400295.1|CF400295 RTWW1_4_H03.g1_A015 Well-watered lob... 33 3.4
gb|CF402934.1|CF402934 RTWW1_23_B07.g1_A015 Well-watered lo... 33 3.4
gb|CV035976.1|CV035976 RTNACL1_43_F09.g1_A029 Roots plus ad... 33 3.4
gb|DN626961.1|DN626961 EST977777 Subtracted pine embryo lib... 33 3.4
gb|DN629249.1|DN629249 EST980065 Subtracted pine embryo lib... 33 3.4
gb|DR015666.1|DR015666 STRS1_4_H06.g1_A034 Shoot tip pitch ... 33 3.4
gb|DR069001.1|DR069001 RTDK1_4_E06.b1_A029 Roots, dark Pinu... 33 3.4
gb|DR160928.1|DR160928 RTFE1_8_G07.g1_A029 Roots minus iron... 33 3.4
gb|DR745496.1|DR745496 RTCU1_30_A12.b1_A029 Roots plus adde... 33 3.4
gb|BQ698789.1|BQ698789 NXNV_063_H02_F Nsf Xylem Normal wood... 32 4.5
gb|AW754754.1|AW754754 PC07E03 Pine TriplEx pollen cone lib... 32 4.6
gb|BG275752.1|BG275752 NXSI_145_E04_F NXSI (Nsf Xylem Side ... 32 4.6
gb|CD025117.1|CD025117 NXSI_009_F04_F NXSI (Nsf Xylem Side ... 32 4.6
gb|CF401798.1|CF401798 RTWW1_15_H06.b1_A015 Well-watered lo... 32 4.6
gb|CR394353.1|CR394353 CR394353 RN Pinus pinaster cDNA clon... 32 4.6
gb|CO366429.1|CO366429 RTK1_27_G03.g1_A029 Roots minus pota... 32 4.6
gb|CO369283.1|CO369283 RTK1_46_D04.b1_A029 Roots minus pota... 32 4.6
gb|CV137071.1|CV137071 EST848280 Sequencing ESTs from loblo... 32 4.6
gb|CV147607.1|CV147607 EST858816 Sequencing ESTs from loblo... 32 4.6
gb|CX646356.1|CX646356 COLD1_8_G10.g1_A029 Root cold Pinus ... 32 4.6
gb|DN611048.1|DN611048 EST964098 Subtracted pine embryo lib... 32 4.6
gb|DN613341.1|DN613341 EST966391 Subtracted pine embryo lib... 32 4.6
gb|DN630152.1|DN630152 EST980968 Subtracted pine embryo lib... 32 4.6
gb|DR100358.1|DR100358 STRR1_63_B12.g1_A033 Stem Response R... 32 4.6
gb|DT626369.1|DT626369 EST1158293 Sequencing ESTs from lobl... 32 4.6
gb|CF474052.1|CF474052 RTWW2_18_F05.g1_A021 Well-watered lo... 28 4.6
gb|CX645882.1|CX645882 COLD1_5_G12.g1_A029 Root cold Pinus ... 28 4.7
gb|DR050990.1|DR050990 RTBOR1_27_A11.b1_A029 Roots plus add... 28 4.8
gb|CF401014.1|CF401014 RTWW1_9_F06.g1_A015 Well-watered lob... 28 5.0
gb|DR098627.1|DR098627 STRR1_46_G06.g1_A033 Stem Response R... 28 5.1
gb|DR050096.1|DR050096 RTBOR1_21_F04.b1_A029 Roots plus add... 28 5.1
gb|DR080137.1|DR080137 RTFEPL1_20_B12.g1_A029 Roots plus ad... 28 5.2
gb|CO201412.1|CO201412 RTCNT2_5_D04.g1_A029 Root control 2 ... 28 5.6
gb|DR024371.1|DR024371 STRS1_64_C02.g1_A034 Shoot tip pitch... 28 5.8
gb|DR684291.1|DR684291 EST1074368 Normalized pine embryo li... 28 6.2
gb|BQ290504.1|BQ290504 NXRV045_B02_F NXRV (Nsf Xylem Root w... 32 6.4
gb|CF389435.1|CF389435 RTDR2_7_D02.g1_A021 Loblolly pine ro... 32 6.4
gb|CR393740.1|CR393740 CR393740 RN Pinus pinaster cDNA clon... 32 6.4
gb|CO173420.1|CO173420 NDL1_36_D07.b1_A029 Needles control ... 32 6.4
gb|CO173505.1|CO173505 NDL1_36_D07.g1_A029 Needles control ... 32 6.4
gb|CO200088.1|CO200088 GEO2_5_G12.b1_A032 Root gravitropism... 32 6.4
gb|CO201837.1|CO201837 RTCNT2_8_B03.g1_A029 Root control 2 ... 32 6.4
gb|DN609852.1|DN609852 EST962902 Subtracted pine embryo lib... 32 6.4
gb|DN612503.1|DN612503 EST965553 Subtracted pine embryo lib... 32 6.4
gb|DR068649.1|DR068649 RTDK1_2_C05.b1_A029 Roots, dark Pinu... 32 6.4
gb|DR089163.1|DR089163 RTAL1_6_H12.g1_A029 Roots plus added... 32 6.4
gb|DR111095.1|DR111095 RTS1_15_E12.b1_A029 Roots minus sulf... 32 6.4
gb|DR386680.1|DR386680 RTHG1_16_F06.g1_A029 Roots plus adde... 32 6.4
gb|DR690147.1|DR690147 EST1080233 Normalized pine embryo li... 32 6.4
gb|DR694408.1|DR694408 EST1084500 Normalized pine embryo li... 32 6.4
gb|DT636058.1|DT636058 EST1150989 Normalized pine embryo li... 32 6.4
gb|CF668690.1|CF668690 RTCNT1_38_C05.b1_A029 Root control P... 29 7.4
gb|DR693757.1|DR693757 EST1083847 Normalized pine embryo li... 29 7.6
gb|CO361181.1|CO361181 NDL2_3_F08.b1_A029 Needles control 2... 31 8.8
gb|DR091537.1|DR091537 RTAL1_22_G08.b1_A029 Roots plus adde... 31 8.8
gb|DR684951.1|DR684951 EST1075028 Normalized pine embryo li... 31 8.8
gb|DT632763.1|DT632763 EST1147694 Normalized pine embryo li... 31 8.8
>gb|BX677864.1|BX677864 BX677864 RN Pinus pinaster cDNA clone RN45G03, mRNA sequence
Length = 523
Score = 47.3 bits (97), Expect(2) = 5e-013
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATL 355
G A++TGGA+GIG+A+ F + G V + D ++E GR +A +
Sbjct: 79 GKVAIITGGAAGIGEAIVRLFTKHGAKVVIADIADEAGRTLAEI 210
Score = 46.9 bits (96), Expect(2) = 5e-013
Identities = 24/86 (27%), Positives = 47/86 (54%)
Frame = +2 / +1
Query: 401 SSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAVN 580
++IF+ CDVS +++ A + ++ + LDI N AGI + +V + ++
Sbjct: 223 AAIFLHCDVSKEEDIRAAVDLAMEKHGQLDIMYNNAGINDPIMVKGVAEYEMEQFDRVMS 402
Query: 581 VNLVAVIDGTRIASQIMRNQKKPGVI 658
VN+ V+ G + A+++M +KK +I
Sbjct: 403 VNVRGVMLGIKHAARVMIPRKKGCII 480
Score = 39.6 bits (80), Expect(2) = 1e-005
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ LP SS S T P K+ A PMP APPV A +P
Sbjct: 203 ASVLPASSAMSAITTLAPCFVKSRTMASPMPAAPPVIIATLP 78
Score = 29.5 bits (58), Expect(2) = 1e-005
Identities = 25/75 (33%), Positives = 32/75 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +PS+T FTL + + + T + IPA L ISS
Sbjct: 467 FFLGIITRAACLMPSITPLTFTLITRSNCSISYSATPLTIIGSLIPALLYMISSCPCFSM 288
Query: 465 CFSKQAARLSALLTS 421
S A S+LLTS
Sbjct: 287 AKSTAALMSSSLLTS 243
>gb|DR070769.1|DR070769 RTDK1_15_A12.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_15_A12_A029 5', mRNA sequence
Length = 683
Score = 50.6 bits (104), Expect(2) = 7e-010
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +2 / +3
Query: 563 WRHAVNVNLVAVIDGTRIASQIMRNQKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMF 742
W +N N+V V++ Q M +Q+ P V+IN GS G+ +P Y+A+K V
Sbjct: 480 WTEVLNTNVVGVLNVQHTFVQSMLHQENPSVVINTGSKQGITNPPGNPAYNASKAAVKSI 659
Query: 743 TRSL 754
T SL
Sbjct: 660 TESL 671
Score = 35.0 bits (70), Expect(2) = 7e-010
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2 / +3
Query: 215 LKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
L G A++TG SGIG+A A G+ + + D +E + A V
Sbjct: 153 LHEGRVAVITGAGSGIGRAAAKVLANLGMKLALADVDQEGLEQTANEV 296
>gb|DR069510.1|DR069510 RTDK1_7_E03.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_7_E03_A029 5', mRNA sequence
Length = 805
Score = 50.6 bits (104), Expect(2) = 9e-010
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +2 / +1
Query: 563 WRHAVNVNLVAVIDGTRIASQIMRNQKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMF 742
W +N N+V V++ Q M +Q+ P V+IN GS G+ +P Y+A+K V
Sbjct: 484 WTEVLNTNVVGVLNVQHTFVQSMLHQENPSVVINTGSKQGITNPPGNPAYNASKAAVKSI 663
Query: 743 TRSL 754
T SL
Sbjct: 664 TESL 675
Score = 35.0 bits (70), Expect(2) = 9e-010
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2 / +1
Query: 215 LKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
L G A++TG SGIG+A A G+ + + D +E + A V
Sbjct: 157 LHEGRVAVITGAGSGIGRAAAKVLANLGMKLALADVDQEGLEQTANEV 300
>gb|CF393796.1|CF393796 RTDS2_1_A09.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_1_A09_A021 5', mRNA sequence
Length = 669
Score = 58.8 bits (122), Expect(2) = 1e-009
Identities = 31/113 (27%), Positives = 54/113 (47%)
Frame = +2 / +3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ R + + E K + P +I+V CDVS +++A + ++ Y LDI
Sbjct: 159 FTKHGARVIIADIADETGKVLAESLSPPAIYVHCDVSKEQDVSAAVDLTIEKYGQLDIMF 338
Query: 500 NCAGIANKTLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
N AG A LV + + VN+ V+ G + A+++M +KK +I
Sbjct: 339 NNAGTAPTALVKSVAEYEMEQFDRVMKVNVRGVMLGIKHAARVMIPRKKGTII 497
Score = 46.0 bits (94), Expect = 3e-004
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A++TGGA GIG+A+ F + G V + D ++E G+ +A + H D+
Sbjct: 99 GKVAIITGGAMGIGEAIVRLFTKHGARVIIADIADETGKVLAESLSPPAIYVHCDVSKEQ 278
Query: 404 SIFVKCDVS 430
+ D++
Sbjct: 279 DVSAAVDLT 305
Score = 36.3 bits (73), Expect(2) = 2e-005
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A + P SS S +T P K+ A P+P APPV A +P
Sbjct: 223 ARTFPVSSAMSAIMTLAPCFVKSRTMASPIPIAPPVIIATLP 98
Score = 32.2 bits (64), Expect(2) = 2e-005
Identities = 26/83 (31%), Positives = 35/83 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +PS+T FT + + + T + A+PA L ISS Y
Sbjct: 484 FFRGIITRAACLMPSITPLTFTFITRSNCSISYSATLLTRAVGAVPALLNMISSCPYFSM 305
Query: 465 CFSKQAARLSALLTSHLTNIEDG 397
S A +LLTS T + G
Sbjct: 304 VKSTAALTSCSLLTSQCT*MAGG 236
Score = 24.0 bits (46), Expect(2) = 1e-009
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN++ P
Sbjct: 601 LGKHGIRVNIVSP 639
>gb|DR072092.1|DR072092 RTDK1_24_C01.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_24_C01_A029 3', mRNA sequence
Length = 759
Score = 55.6 bits (115), Expect(2) = 1e-009
Identities = 23/64 (35%), Positives = 39/64 (60%)
Frame = +2 / -2
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
++N++ I TRIA + MR KKPG I+++ S P + P+YS +K + F R ++
Sbjct: 308 DINMMHPIRMTRIAIRKMREVKKPGTILHLSSITAQKPSVVLPLYSVSKAAISQFVRCMA 129
Query: 758 PLKR 769
PL++
Sbjct: 128 PLEQ 117
Score = 29.5 bits (58), Expect(2) = 1e-009
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2 / -2
Query: 230 SALVTGGASGIGKALCIAFARRGLFVTVVDFS 325
+ALVTGG SGI L + +G V + D +
Sbjct: 638 TALVTGGGSGINLELAKSLRGKGCAVLIADIA 543
>gb|DR018098.1|DR018098 STRS1_20_B02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_20_B02_A034 5', mRNA sequence
Length = 630
Score = 57.9 bits (120), Expect = 9e-008
Identities = 29/105 (27%), Positives = 52/105 (49%)
Frame = +2 / +1
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS ++++A + ++ Y LDI N AG +
Sbjct: 169 IADVAEKAGRKLEQSLSPAVATYVHCDVSKEEDVSAAVDVAIEKYGQLDIMYNNAGTNDS 348
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 349 FLVKSVAEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKGCII 483
Score = 45.1 bits (92), Expect = 6e-004
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ F + G V + D +E+ GR++
Sbjct: 82 GKVAIVTGGAAGIGEAIVQLFIKHGAKVVIADVAEKAGRKL 204
Score = 34.5 bits (69), Expect(2) = 4e-004
Identities = 18/39 (46%), Positives = 18/39 (46%)
Frame = -2 / -2
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S T P L A PMP APPVT A P
Sbjct: 197 LPAFSATSAITTLAPCLMNN*TMASPMPAAPPVTIATFP 81
Score = 29.0 bits (57), Expect(2) = 4e-004
Identities = 24/78 (30%), Positives = 32/78 (41%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +P +T FT + + + T L +PA L +SS Y
Sbjct: 470 FFRGIITRAACLMPCITPFTFTFITRSNCSISYSATLFTKKLSLVPALLYIMSS*PYFSM 291
Query: 465 CFSKQAARLSALLTSHLT 412
S A S+LLTS T
Sbjct: 290 ATSTAALTSSSLLTSQCT 237
>gb|DR058244.1|DR058244 RTNIT1_10_D11.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_10_D11_A029 5', mRNA sequence
Length = 767
Score = 57.4 bits (119), Expect = 1e-007
Identities = 29/105 (27%), Positives = 52/105 (49%)
Frame = +2 / +2
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS ++++A + ++ Y LDI N AG +
Sbjct: 206 IADVAEKAGRKLEQSLSPAVATYVHCDVSKEEDVSAAVDVAIEKYGQLDIMYNNAGTNDS 385
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 386 FLVKSVEEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKGCII 520
Score = 44.6 bits (91), Expect = 9e-004
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ F + G V + D +E+ GR++
Sbjct: 119 GKVAIVTGGAAGIGEAIVQLFIKHGAKVIIADVAEKAGRKL 241
Score = 35.4 bits (71), Expect(2) = 4e-004
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = -2 / -3
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S +T P L A PMP APPVT A P
Sbjct: 234 LPAFSATSAIMTLAPCLMNN*TMASPMPAAPPVTMATFP 118
Score = 28.1 bits (55), Expect(2) = 4e-004
Identities = 24/78 (30%), Positives = 32/78 (41%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +P +T FT + + + T L +PA L +SS Y
Sbjct: 507 FFRGIITRAACLMPCITPFTFTFITRSNCSISYSSTLFTKKLSLVPALLYIMSS*PYFSM 328
Query: 465 CFSKQAARLSALLTSHLT 412
S A S+LLTS T
Sbjct: 327 ATSTAALTSSSLLTSQCT 274
>gb|DR101661.1|DR101661 STRR1_74_H08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_H08_A033 5', mRNA sequence
Length = 556
Score = 57.4 bits (119), Expect = 1e-007
Identities = 29/105 (27%), Positives = 52/105 (49%)
Frame = +2 / +3
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS ++++A + ++ Y LDI N AG +
Sbjct: 192 IADVAEKAGRKLEQSLSPAVATYVHCDVSKEEDVSAAVDVAIEKYGQLDIMYNNAGTNDS 371
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 372 FLVKSVEEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKGCII 506
Score = 44.6 bits (91), Expect = 9e-004
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ F + G V + D +E+ GR++
Sbjct: 105 GKVAIVTGGAAGIGEAIVQLFIKHGAKVIIADVAEKAGRKL 227
Score = 35.4 bits (71), Expect(2) = 4e-004
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = -2 / -1
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S +T P L A PMP APPVT A P
Sbjct: 220 LPAFSATSAIMTLAPCLMNN*TMASPMPAAPPVTMATFP 104
Score = 28.1 bits (55), Expect(2) = 4e-004
Identities = 24/78 (30%), Positives = 32/78 (41%)
Frame = -2 / -1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +P +T FT + + + T L +PA L +SS Y
Sbjct: 493 FFRGIITRAACLMPCITPFTFTFITRSNCSISYSSTLFTKKLSLVPALLYIMSS*PYFSM 314
Query: 465 CFSKQAARLSALLTSHLT 412
S A S+LLTS T
Sbjct: 313 ATSTAALTSSSLLTSQCT 260
>gb|CV032381.1|CV032381 RTNACL1_7_E11.g2_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_7_E11_A029 5', mRNA sequence
Length = 613
Score = 57.0 bits (118), Expect = 2e-007
Identities = 29/105 (27%), Positives = 51/105 (48%)
Frame = +2 / +3
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS ++++A + + Y LDI N AG +
Sbjct: 207 IADVAEKAGRKLEQSLSPAVATYVHCDVSKEEDVSAAVDVAIDKYGQLDIMYNNAGTNDS 386
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 387 FLVKSVAEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKGCII 521
Score = 44.6 bits (91), Expect = 9e-004
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ F + G V + D +E+ GR++
Sbjct: 120 GKVAIVTGGAAGIGEAIVQLFIKHGAKVIIADVAEKAGRKL 242
Score = 35.0 bits (70), Expect(2) = 2e-004
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = -2 / -1
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S +T P L A PMP APPVT A P
Sbjct: 235 LPAFSATSAIMTLAPCLMNN*TMASPMPAAPPVTIATFP 119
Score = 29.9 bits (59), Expect(2) = 2e-004
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = -2 / -1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +P +T FT + + + T L +PA L +SS Y+
Sbjct: 508 FFRGIITRAACLMPCITPFTFTFITRSNCSISYSATLFTKKLSLVPALLYIMSS*PYLSM 329
Query: 465 CFSKQAARLSALLTSHLT 412
S A S+LLTS T
Sbjct: 328 ATSTAALTSSSLLTSQCT 275
>gb|DR018800.1|DR018800 STRS1_25_F10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_25_F10_A034 5', mRNA sequence
Length = 788
Score = 57.0 bits (118), Expect = 2e-007
Identities = 29/105 (27%), Positives = 51/105 (48%)
Frame = +2 / +2
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS ++++A + + Y LDI N AG +
Sbjct: 203 IADVAEKAGRKLEQSLSPAVATYVHCDVSKEEDVSAAVDVAIDKYGQLDIMYNNAGTNDS 382
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 383 FLVKSVAEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKGCII 517
Score = 44.6 bits (91), Expect = 9e-004
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ F + G V + D +E+ GR++
Sbjct: 116 GKVAIVTGGAAGIGEAIVQLFIKHGAKVIIADVAEKAGRKL 238
Score = 35.0 bits (70), Expect(2) = 2e-004
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = -2 / -3
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S +T P L A PMP APPVT A P
Sbjct: 231 LPAFSATSAIMTLAPCLMNN*TMASPMPAAPPVTIATFP 115
Score = 29.9 bits (59), Expect(2) = 2e-004
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +P +T FT + + + T L +PA L +SS Y+
Sbjct: 504 FFRGIITRAACLMPCITPFTFTFITRSNCSISYSATLFTKKLSLVPALLYIMSS*PYLSM 325
Query: 465 CFSKQAARLSALLTSHLT 412
S A S+LLTS T
Sbjct: 324 ATSTAALTSSSLLTSQCT 271
>gb|DR019214.1|DR019214 STRS1_28_B10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_B10_A034 5', mRNA sequence
Length = 857
Score = 57.0 bits (118), Expect = 2e-007
Identities = 30/105 (28%), Positives = 52/105 (49%)
Frame = +2 / +1
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L S+ +V CDVS ++++A + + Y LDI N AG +
Sbjct: 244 IADVAEKAGRKLAESLSPASATYVHCDVSKEEDVSAAVDLAMDKYGQLDIMYNNAGTNDS 423
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 424 FLVKSVAEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKGCII 558
Score = 46.9 bits (96), Expect = 2e-004
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G +VTGGA+GIG+A+ FA+ G V + D +E+ GR++A
Sbjct: 157 GKVVIVTGGAAGIGEAIVQLFAKHGAKVIIADVAEKAGRKLA 282
Score = 36.3 bits (73), Expect(2) = 3e-005
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ LP S S +T P A + A PMP APPVT P
Sbjct: 281 ASFLPAFSATSAIMTFAPCFANS*TMASPMPAAPPVTITTFP 156
Score = 31.3 bits (62), Expect(2) = 3e-005
Identities = 28/95 (29%), Positives = 40/95 (42%)
Frame = -2 / -1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +P +T FT + + + T L +PA L +SS Y+
Sbjct: 545 FFRGIITRAACLMPCITPFTFTFITRSNCSISYSATLFTRKLSLVPALLYIMSS*PYLSI 366
Query: 465 CFSKQAARLSALLTSHLTNIEDGILRSP*NLLFSF 361
S A S+LLTS T + D R + L +F
Sbjct: 365 ARSTAALTSSSLLTSQCT*VADAGERDSASFLPAF 261
>gb|DR022846.1|DR022846 STRS1_53_H02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_53_H02_A034 5', mRNA sequence
Length = 773
Score = 57.0 bits (118), Expect = 2e-007
Identities = 29/105 (27%), Positives = 51/105 (48%)
Frame = +2 / +2
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS ++++A + + Y LDI N AG +
Sbjct: 191 IADVAEKAGRKLEQSLSPAVATYVHCDVSKEEDVSAAVDVAIDKYGQLDIMYNNAGTNDS 370
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 371 FLVKSVAEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKGCII 505
Score = 44.6 bits (91), Expect = 9e-004
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ F + G V + D +E+ GR++
Sbjct: 104 GKVAIVTGGAAGIGEAIVQLFIKHGAKVIIADVAEKAGRKL 226
Score = 35.0 bits (70), Expect(2) = 2e-004
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = -2 / -3
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S +T P L A PMP APPVT A P
Sbjct: 219 LPAFSATSAIMTLAPCLMNN*TMASPMPAAPPVTIATFP 103
Score = 29.9 bits (59), Expect(2) = 2e-004
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +P +T FT + + + T L +PA L +SS Y+
Sbjct: 492 FFRGIITRAACLMPCITPFTFTFITRSNCSISYSATLFTKKLSLVPALLYIMSS*PYLSM 313
Query: 465 CFSKQAARLSALLTSHLT 412
S A S+LLTS T
Sbjct: 312 ATSTAALTSSSLLTSQCT 259
>gb|DR093702.1|DR093702 STRR1_9_H07.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_9_H07_A033 5', mRNA sequence
Length = 742
Score = 57.0 bits (118), Expect = 2e-007
Identities = 30/105 (28%), Positives = 52/105 (49%)
Frame = +2 / +2
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L S+ +V CDVS ++++A + + Y LDI N AG +
Sbjct: 215 IADVAEKAGRKLPESLSPASATYVHCDVSKEEDVSAAVDLAMDKYGQLDIMYNNAGTNDS 394
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 395 FLVKSVAEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKGCII 529
Score = 45.1 bits (92), Expect = 6e-004
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G +VTGGA+GIG+A+ FA+ G V + D +E+ GR++
Sbjct: 128 GKVVIVTGGAAGIGEAIVQLFAKHGAKVIIADVAEKAGRKL 250
Score = 35.0 bits (70), Expect(2) = 7e-005
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = -2 / -2
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S +T P A + A PMP APPVT P
Sbjct: 243 LPAFSATSAIMTFAPCFANS*TMASPMPAAPPVTITTFP 127
Score = 31.3 bits (62), Expect(2) = 7e-005
Identities = 28/95 (29%), Positives = 40/95 (42%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +P +T FT + + + T L +PA L +SS Y+
Sbjct: 516 FFRGIITRAACLMPCITPFTFTFITRSNCSISYSATLFTRKLSLVPALLYIMSS*PYLSI 337
Query: 465 CFSKQAARLSALLTSHLTNIEDGILRSP*NLLFSF 361
S A S+LLTS T + D R + L +F
Sbjct: 336 ARSTAALTSSSLLTSQCT*VADAGERDSGSFLPAF 232
>gb|DR096264.1|DR096264 STRR1_26_G07.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_26_G07_A033 5', mRNA sequence
Length = 788
Score = 57.0 bits (118), Expect = 2e-007
Identities = 29/105 (27%), Positives = 51/105 (48%)
Frame = +2 / +1
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS ++++A + + Y LDI N AG +
Sbjct: 115 IADVAEKAGRKLEQSLSPAVATYVHCDVSKEEDVSAAVDVAIDKYGQLDIMYNNAGTNDS 294
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 295 FLVKSVAEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKGCII 429
Score = 44.6 bits (91), Expect = 9e-004
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ F + G V + D +E+ GR++
Sbjct: 28 GKVAIVTGGAAGIGEAIVQLFIKHGAKVIIADVAEKAGRKL 150
Score = 35.0 bits (70), Expect(2) = 2e-004
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = -2 / -1
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S +T P L A PMP APPVT A P
Sbjct: 143 LPAFSATSAIMTLAPCLMNN*TMASPMPAAPPVTIATFP 27
Score = 29.9 bits (59), Expect(2) = 2e-004
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = -2 / -1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +P +T FT + + + T L +PA L +SS Y+
Sbjct: 416 FFRGIITRAACLMPCITPFTFTFITRSNCSISYSATLFTKKLSLVPALLYIMSS*PYLSM 237
Query: 465 CFSKQAARLSALLTSHLT 412
S A S+LLTS T
Sbjct: 236 ATSTAALTSSSLLTSQCT 183
>gb|DR166107.1|DR166107 RTPHOS1_9_B02.g2_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_9_B02_A029 5', mRNA sequence
Length = 584
Score = 57.0 bits (118), Expect = 2e-007
Identities = 29/105 (27%), Positives = 51/105 (48%)
Frame = +2 / +3
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS ++++A + + Y LDI N AG +
Sbjct: 246 IADVAEKAGRKLEQSLSPAVATYVHCDVSKEEDVSAAVDVAIDKYGQLDIMYNNAGTNDS 425
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 426 FLVKSVAEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKGCII 560
Score = 44.6 bits (91), Expect = 9e-004
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ F + G V + D +E+ GR++
Sbjct: 159 GKVAIVTGGAAGIGEAIVQLFIKHGAKVIIADVAEKAGRKL 281
Score = 35.0 bits (70), Expect(2) = 2e-004
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = -2 / -2
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S +T P L A PMP APPVT A P
Sbjct: 274 LPAFSATSAIMTLAPCLMNN*TMASPMPAAPPVTIATFP 158
Score = 29.9 bits (59), Expect(2) = 2e-004
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +P +T FT + + + T L +PA L +SS Y+
Sbjct: 547 FFRGIITRAACLMPCITPFTFTFITRSNCSISYSATLFTKKLSLVPALLYIMSS*PYLSM 368
Query: 465 CFSKQAARLSALLTSHLT 412
S A S+LLTS T
Sbjct: 367 ATSTAALTSSSLLTSQCT 314
>gb|DR745597.1|DR745597 RTCU1_30_F12.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_30_F12_A029 5', mRNA sequence
Length = 779
Score = 57.0 bits (118), Expect = 2e-007
Identities = 29/105 (27%), Positives = 51/105 (48%)
Frame = +2 / +3
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS ++++A + + Y LDI N AG +
Sbjct: 216 IADVAEKAGRKLEQSLSPAVATYVHCDVSKEEDVSAAVDVAIDKYGQLDIMYNNAGTNDS 395
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 396 FLVKSVAEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKGCII 530
Score = 44.6 bits (91), Expect = 9e-004
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ F + G V + D +E+ GR++
Sbjct: 129 GKVAIVTGGAAGIGEAIVQLFIKHGAKVIIADVAEKAGRKL 251
Score = 35.0 bits (70), Expect(2) = 2e-004
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = -2 / -2
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S +T P L A PMP APPVT A P
Sbjct: 244 LPAFSATSAIMTLAPCLMNN*TMASPMPAAPPVTIATFP 128
Score = 29.9 bits (59), Expect(2) = 2e-004
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +P +T FT + + + T L +PA L +SS Y+
Sbjct: 517 FFRGIITRAACLMPCITPFTFTFITRSNCSISYSATLFTKKLSLVPALLYIMSS*PYLSM 338
Query: 465 CFSKQAARLSALLTSHLT 412
S A S+LLTS T
Sbjct: 337 ATSTAALTSSSLLTSQCT 284
>gb|CF396043.1|CF396043 RTDS2_20_H11.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_20_H11_A021 5', mRNA sequence
Length = 668
Score = 56.5 bits (117), Expect = 2e-007
Identities = 29/105 (27%), Positives = 51/105 (48%)
Frame = +2 / +2
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS ++++A + + Y LDI N AG +
Sbjct: 206 IADVAEKAGRKLEQSLSPAVATYVHCDVSKEEDVSATVDVAIDKYGQLDIMYNNAGTNDS 385
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 386 FLVKSVAEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKGCII 520
Score = 44.6 bits (91), Expect = 9e-004
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ F + G V + D +E+ GR++
Sbjct: 119 GKVAIVTGGAAGIGEAIVQLFIKHGAKVIIADVAEKAGRKL 241
Score = 35.0 bits (70), Expect(2) = 7e-005
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = -2 / -3
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S +T P L A PMP APPVT A P
Sbjct: 234 LPAFSATSAIMTLAPCLMNN*TMASPMPAAPPVTIATFP 118
Score = 31.3 bits (62), Expect(2) = 7e-005
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +P +T FTL + + + T L +PA L +SS Y+
Sbjct: 507 FFRGIITRAACLMPCITPFTFTLITRSNCSISYSATLFTKKLSLVPALLYIMSS*PYLSM 328
Query: 465 CFSKQAARLSALLTSHLT 412
S A S+LLTS T
Sbjct: 327 ATSTVALTSSSLLTSQCT 274
>gb|DR016741.1|DR016741 STRS1_11_H07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_11_H07_A034 5', mRNA sequence
Length = 888
Score = 55.6 bits (115), Expect = 4e-007
Identities = 30/105 (28%), Positives = 52/105 (49%)
Frame = +2 / +3
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L S+ +V CDVS ++++A + + Y LDI N AG +
Sbjct: 18 IADVAEKAG*KLAESLSPASATYVHCDVSKEEDVSAAVDLAMDKYGQLDIMYNNAGTNDS 197
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 198 FLVKSVAEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKGCII 332
>gb|DR016499.1|DR016499 STRS1_10_B04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_10_B04_A034 5', mRNA sequence
Length = 937
Score = 55.1 bits (114), Expect = 6e-007
Identities = 29/105 (27%), Positives = 51/105 (48%)
Frame = +2 / +1
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L S+ +V CDV ++++A + + Y LDI N AG +
Sbjct: 244 IADVAEKAGRKLAESLSPASATYVHCDVGKEEDVSAAVDLAMDKYGQLDIMYNNAGTNDS 423
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 424 FLVKSVAEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKGCII 558
Score = 46.9 bits (96), Expect = 2e-004
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G +VTGGA+GIG+A+ FA+ G V + D +E+ GR++A
Sbjct: 157 GKVVIVTGGAAGIGEAIVQLFAKHGAKVIIADVAEKAGRKLA 282
Score = 37.3 bits (75), Expect = 0.14
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ LP S S +T P A + A PMP APPVT +P
Sbjct: 281 ASFLPAFSATSAIMTFAPCFANS*TMASPMPAAPPVTITTLP 156
>gb|DR053220.1|DR053220 RTCA1_9_F01.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_9_F01_A029 5', mRNA sequence
Length = 560
Score = 55.1 bits (114), Expect = 6e-007
Identities = 29/105 (27%), Positives = 51/105 (48%)
Frame = +2 / +3
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS ++++A + + Y LDI N AG +
Sbjct: 141 IADVAEKAGRKLEESLSPAVATYVHCDVSKEEDVSAAVDVAMDKYGQLDIMYNNAGTNDS 320
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 321 FLVKSVVEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKGCII 455
Score = 44.6 bits (91), Expect = 9e-004
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ F + G V + D +E+ GR++
Sbjct: 54 GKVAIVTGGAAGIGEAIVRLFIKHGAKVIIADVAEKAGRKL 176
Score = 35.4 bits (71), Expect(2) = 1e-004
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = -2 / -2
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S +T P L A PMP APPVT A P
Sbjct: 169 LPAFSATSAIMTLAPCLMNNRTMASPMPAAPPVTIATFP 53
Score = 29.9 bits (59), Expect(2) = 1e-004
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +P +T FT + + + T L +PA L +SS Y+
Sbjct: 442 FFRGIITRAACLMPCITPFTFTFITRSNCSISYSTTLFTKKLSLVPALLYIMSSWPYLSM 263
Query: 465 CFSKQAARLSALLTSHLT 412
S A S+LLTS T
Sbjct: 262 ATSTAALTSSSLLTSQCT 209
>gb|CF398688.1|CF398688 RTDS3_13_E09.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_13_E09_A022 5', mRNA sequence
Length = 629
Score = 54.7 bits (113), Expect = 8e-007
Identities = 29/105 (27%), Positives = 51/105 (48%)
Frame = +2 / +3
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS +++A + + Y LDI N AG ++
Sbjct: 60 IADVAEKAGRKLEESLSPAVATYVHCDVSKEKDVSAAVDVAMDKYGQLDIMYNNAGTNDR 239
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 240 FLVKSVVEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKGCII 374
>gb|DR112029.1|DR112029 RTS1_25_H03.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_25_H03_A029 3', mRNA sequence
Length = 808
Score = 54.7 bits (113), Expect = 8e-007
Identities = 28/102 (27%), Positives = 50/102 (49%)
Frame = +2 / +1
Query: 353 LVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLV 532
+ +K K L + +V CDVS ++++A + ++ Y LDI N AG + LV
Sbjct: 4 VAEKAGRKLEQSLSPAVATYVDCDVSKEEDVSAAVDVAIEKYGQLDIMYNNAGTNDSFLV 183
Query: 533 YDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
+ +NVN+ V+ G + A+++M +KK +I
Sbjct: 184 KSVEEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKGCII 309
>gb|DR159768.1|DR159768 RTFE1_1_A05.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_1_A05_A029 5', mRNA sequence
Length = 814
Score = 54.7 bits (113), Expect = 8e-007
Identities = 29/105 (27%), Positives = 51/105 (48%)
Frame = +2 / +2
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS +++A + + Y LDI N AG ++
Sbjct: 158 IADVAEKAGRKLEESLSPAVATYVHCDVSKEKDVSAAVDVAMDKYGQLDIMYNNAGTNDR 337
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 338 FLVKSVVEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKGCII 472
Score = 44.1 bits (90), Expect = 0.001
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ F + G V + D +E+ GR++
Sbjct: 71 GKVAVVTGGAAGIGEAIVRLFIKHGAKVIIADVAEKAGRKL 193
Score = 36.8 bits (74), Expect(2) = 4e-004
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -2 / -2
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S +T P L A PMP APPVT+A P
Sbjct: 186 LPAFSATSAIMTLAPCLMNNRTMASPMPAAPPVTTATFP 70
Score = 26.7 bits (52), Expect(2) = 4e-004
Identities = 23/78 (29%), Positives = 32/78 (41%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +P +T FT + + + T L +PA L +SS Y+
Sbjct: 459 FFRGIITRAACLMPCITPFTFTFITRSNCSISYSTTLFTKNLSLVPALLYIMSSWPYLSM 280
Query: 465 CFSKQAARLSALLTSHLT 412
S A +LLTS T
Sbjct: 279 ATSTAALTSFSLLTSQCT 226
>gb|DR167963.1|DR167963 RTPHOS1_22_F11.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_22_F11_A029 3', mRNA sequence
Length = 604
Score = 39.6 bits (80), Expect(2) = 1e-006
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2 / -1
Query: 416 KCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVY 535
KCDV+N D+ A FE + T+ +D+ + AGI + Y
Sbjct: 367 KCDVTNWDSQLALFELGISTFGAIDVVVANAGITENGVFY 248
Score = 32.7 bits (65), Expect(2) = 1e-006
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2 / -1
Query: 212 ELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHG 385
E G L+TG A+GIGK + FA+ + + D + EV ++K + G
Sbjct: 544 ERSRGKVVLITGAAAGIGKETALVFAQFEAKLVLGDLNGAGIDEVVAQIKKSGGQAVG 371
>gb|CV036480.1|CV036480 RTNACL1_59_C04.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_59_C04_A029 5', mRNA sequence
Length = 847
Score = 53.8 bits (111), Expect = 2e-006
Identities = 29/105 (27%), Positives = 50/105 (47%)
Frame = +2 / +2
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS +++A + + Y LDI N AG +
Sbjct: 158 IADVAEKAGRKLEESLSPAVATYVHCDVSKEKDVSAAVDVAMDKYGQLDIMYNNAGTNDS 337
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
LV + +NVN+ V+ G + A+++M +KK +I
Sbjct: 338 FLVKSVVEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKGCII 472
Score = 44.1 bits (90), Expect = 0.001
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ F + G V + D +E+ GR++
Sbjct: 71 GKVAVVTGGAAGIGEAIVRLFIKHGAKVIIADVAEKAGRKL 193
Score = 36.8 bits (74), Expect(2) = 3e-004
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -2 / -2
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S +T P L A PMP APPVT+A P
Sbjct: 186 LPAFSATSAIMTLAPCLMNNRTMASPMPAAPPVTTATFP 70
Score = 27.2 bits (53), Expect(2) = 3e-004
Identities = 23/78 (29%), Positives = 32/78 (41%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +P +T FT + + + T L +PA L +SS Y+
Sbjct: 459 FFRGIITRAACLMPCITPFTFTFITRSNCSISYSTTLFTKKLSLVPALLYIMSSWPYLSM 280
Query: 465 CFSKQAARLSALLTSHLT 412
S A +LLTS T
Sbjct: 279 ATSTAALTSFSLLTSQCT 226
>gb|CX652210.1|CX652210 COLD1_57_E02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_57_E02_A029 5', mRNA sequence
Length = 804
Score = 53.3 bits (110), Expect = 2e-006
Identities = 28/113 (24%), Positives = 55/113 (48%)
Frame = +2 / +1
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F+++ R + + E+ K + P + +V CDVS +++A + ++ + LDI
Sbjct: 127 FTKQGARVIIADIADESGKNLAESLSPPATYVHCDVSKEQDISAAVDLAIELHGQLDIMF 306
Query: 500 NCAGIANKTLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
N AG A V + ++VN+ V+ G + A+++M +KK +I
Sbjct: 307 NNAGTAESGSVKSVAEYEMEQYDRVMSVNVRGVMLGIKHAARVMIPRKKGCII 465
Score = 46.9 bits (96), Expect = 2e-004
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = +2 / +1
Query: 203 GEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
G G A++TG A G+G+A+ F ++G V + D ++E+G+ +A + + H
Sbjct: 46 GSQRRLEGKVAIITGAAMGLGEAIARLFTKQGARVIIADIADESGKNLAESLSPPATYVH 225
Query: 383 GDLRIPSSIFVKCDVS 430
D+ I D++
Sbjct: 226 CDVSKEQDISAAVDLA 273
Score = 31.3 bits (62), Expect = 8.8
Identities = 27/83 (32%), Positives = 34/83 (40%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +PSMT FTL + + + T A+PA L ISS
Sbjct: 452 FFRGIITRAACLMPSMTPLTFTLITRSYCSISYSATLFTEPDSAVPALLNMISSCPCSSM 273
Query: 465 CFSKQAARLSALLTSHLTNIEDG 397
S A +LLTS T + G
Sbjct: 272 AKSTAALMSCSLLTSQCT*VAGG 204
>gb|CF394913.1|CF394913 RTDS2_8_B10.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_8_B10_A021 5', mRNA sequence
Length = 751
Score = 37.3 bits (75), Expect(2) = 3e-006
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2 / +3
Query: 392 RIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
R+ ++F DVS+A+++ A E V Y LDI IN AGI
Sbjct: 162 RMGKAMFKYADVSSAEDVEALVEAAVAEYGRLDIMINNAGI 284
Score = 33.6 bits (67), Expect(2) = 3e-006
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVD 319
A+VTG +SG+G+A+ +A A G + D
Sbjct: 9 AIVTGSSSGVGRAIALALASEGACIVCSD 95
Score = 30.4 bits (60), Expect(2) = 0.10
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = -2 / -1
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDGIL 391
IPA L+ IS Y T S +A+ SA LTS NI IL
Sbjct: 283 IPALLIMISRRPYSATAASTRASTSSAELTSAYLNIAFPIL 161
Score = 24.9 bits (48), Expect(2) = 0.10
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2 / -1
Query: 297 PLLAKAIQSAFPMPEAPPVTSADM 226
P AKA A P PE PVT A +
Sbjct: 73 PSEAKAKAMALPTPEDEPVTIATL 2
>gb|AI813131.1|AI813131 23C8 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 530
Score = 52.4 bits (108), Expect = 4e-006
Identities = 27/109 (24%), Positives = 54/109 (49%)
Frame = +2 / +2
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F+++ R + + E+ K + P + +V CDVS +++A + ++ + LDI
Sbjct: 137 FTKQGARVIIADIADESGKNLAESLSPPATYVHCDVSKEQDISAAVDLAIELHGQLDIMF 316
Query: 500 NCAGIANKTLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKK 646
N AG A V + + ++VN+ V+ G + A+++M +KK
Sbjct: 317 NNAGTAESGSVKNVAEYEMEQYDRVMSVNVRRVMLGIKHAARVMIPRKK 463
Score = 46.9 bits (96), Expect = 2e-004
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = +2 / +2
Query: 203 GEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
G G A++TG A G+G+A+ F ++G V + D ++E+G+ +A + + H
Sbjct: 56 GSQRRLEGKVAIITGAAMGLGEAIARLFTKQGARVIIADIADESGKNLAESLSPPATYVH 235
Query: 383 GDLRIPSSIFVKCDVS 430
D+ I D++
Sbjct: 236 CDVSKEQDISAAVDLA 283
Score = 31.3 bits (62), Expect = 8.8
Identities = 27/83 (32%), Positives = 34/83 (40%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FF I A +PSMT FTL + + + T A+PA L ISS
Sbjct: 462 FFRGIITRAACLMPSMTLLTFTLITRSYCSISYSATFFTEPDSAVPALLNMISSCPCSSM 283
Query: 465 CFSKQAARLSALLTSHLTNIEDG 397
S A +LLTS T + G
Sbjct: 282 AKSTAALMSCSLLTSQCT*VAGG 214
>gb|DR101585.1|DR101585 STRR1_74_H08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_H08_A033 3', mRNA sequence
Length = 828
Score = 51.9 bits (107), Expect = 5e-006
Identities = 25/83 (30%), Positives = 44/83 (53%)
Frame = +2 / +2
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAVNVNL 589
+V CDVS ++++A + ++ Y LDI N AG + LV + +NVN+
Sbjct: 35 YVHCDVSKEEDVSAAVDVAIEKYGQLDIMYNNAGTNDSFLVKSVEEYDMEQFDRVINVNV 214
Query: 590 VAVIDGTRIASQIMRNQKKPGVI 658
V+ G + A+++M +KK +I
Sbjct: 215 KGVMHGIKHAARVMIPRKKGCII 283
>gb|CF385822.1|CF385822 RTDR1_6_B10.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_6_B10_A015 5', mRNA
sequence
Length = 726
Score = 51.5 bits (106), Expect = 7e-006
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 251 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVI 430
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 431 SVNVRGVMLGIKHAARVMIPRKKGSII 511
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 113 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 292
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 293 DISTVVDLA 319
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 237 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 112
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 498 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 337
>gb|CV032305.1|CV032305 RTNACL1_7_E11.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_7_E11_A029 3', mRNA sequence
Length = 770
Score = 51.5 bits (106), Expect = 7e-006
Identities = 25/83 (30%), Positives = 43/83 (51%)
Frame = +2 / +1
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAVNVNL 589
+V CDVS ++++A + + Y LDI N AG + LV + +NVN+
Sbjct: 7 YVHCDVSKEEDVSAAVDVAIDKYGQLDIMYNNAGTNDSFLVKSVAEYDMEQFDRVINVNV 186
Query: 590 VAVIDGTRIASQIMRNQKKPGVI 658
V+ G + A+++M +KK +I
Sbjct: 187 KGVMHGIKHAARVMIPRKKGCII 255
>gb|DR016909.1|DR016909 STRS1_12_H07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_12_H07_A034 5', mRNA sequence
Length = 766
Score = 51.5 bits (106), Expect = 7e-006
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = +2 / +1
Query: 401 SSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAVN 580
S+ +V CDVS ++++A + + Y LDI N AG + LV + +N
Sbjct: 28 SATYVHCDVSKEEDVSAAVDLAMDKYGQLDIMYNNAGTNDSFLVKSVAEYDMEQFDRVMN 207
Query: 581 VNLVAVIDGTRIASQIMRNQKKPGVI 658
VN+ V+ G + A+++M +KK +I
Sbjct: 208 VNVKGVMHGIKHAARVMIPRKKGCII 285
>gb|DR022130.1|DR022130 STRS1_49_C03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_49_C03_A034 3', mRNA sequence
Length = 791
Score = 51.5 bits (106), Expect = 7e-006
Identities = 25/83 (30%), Positives = 43/83 (51%)
Frame = +2 / +3
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAVNVNL 589
+V CDVS ++++A + + Y LDI N AG + LV + +NVN+
Sbjct: 3 YVHCDVSKEEDVSAAVDVAIDKYGQLDIMYNNAGTNDSFLVKSVAEYDMEQFDRVINVNV 182
Query: 590 VAVIDGTRIASQIMRNQKKPGVI 658
V+ G + A+++M +KK +I
Sbjct: 183 KGVMHGIKHAARVMIPRKKGCII 251
>gb|DR090596.1|DR090596 RTAL1_16_D11.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_16_D11_A029 3', mRNA sequence
Length = 809
Score = 51.5 bits (106), Expect = 7e-006
Identities = 28/113 (24%), Positives = 55/113 (48%)
Frame = +2 / -2
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ + + + E K + PS+ + CDVS +++ A + ++ Y LDI
Sbjct: 700 FTKHGAKVIIADLADEVGKKLAESLSPSATYAHCDVSKEEDIRAVVDMTMEKYGQLDIMY 521
Query: 500 NCAGIANKTLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
N AGI++ L + ++VN+ V+ G + A+++M +KK +I
Sbjct: 520 NNAGISDALLFQRVEEYDMEAYDRVMSVNVRGVMLGIKHAARVMIPRKKGCII 362
Score = 46.0 bits (94), Expect = 3e-004
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A++TGGA G+G+A+ F + G V + D ++E G+++A + + H D+
Sbjct: 760 GKVAIITGGAMGMGEAIARLFTKHGAKVIIADLADEVGKKLAESLSPSATYAHCDVSKEE 581
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 580 DIRAVVDMT 554
Score = 38.6 bits (78), Expect(2) = 9e-005
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -2 / +3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ LP SS +S +T P K+ A P+P APPV A +P
Sbjct: 636 ASFLPTSSARSAIMTLAPCFVKSRAIASPIPMAPPVIIATLP 761
Score = 27.2 bits (53), Expect(2) = 9e-005
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -2 / +3
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
IPA L ISS Y S A S+LLTS + +G
Sbjct: 507 IPALLYMISS*PYFSMVISTTALMSSSLLTSQCA*VAEG 623
>gb|DR096182.1|DR096182 STRR1_26_G07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_26_G07_A033 3', mRNA sequence
Length = 782
Score = 51.5 bits (106), Expect = 7e-006
Identities = 25/83 (30%), Positives = 43/83 (51%)
Frame = +2 / +2
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAVNVNL 589
+V CDVS ++++A + + Y LDI N AG + LV + +NVN+
Sbjct: 29 YVHCDVSKEEDVSAAVDVAIDKYGQLDIMYNNAGTNDSFLVKSVAEYDMEQFDRVINVNV 208
Query: 590 VAVIDGTRIASQIMRNQKKPGVI 658
V+ G + A+++M +KK +I
Sbjct: 209 KGVMHGIKHAARVMIPRKKGCII 277
>gb|CF396189.1|CF396189 RTDS2_15_H11.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_15_H11_A021 5', mRNA sequence
Length = 784
Score = 51.0 bits (105), Expect = 1e-005
Identities = 26/113 (23%), Positives = 57/113 (50%)
Frame = +2 / +1
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F+++ + + + E + + P++ F+ CDVS +++ A + ++ + LDI
Sbjct: 121 FTKQGAKVIIADIADEAGRTLAESLSPAATFLHCDVSKEEDITAAVDLAMEKHGQLDIMY 300
Query: 500 NCAGIANKTLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
N AGI + +V + ++VN+ V+ G + A+++M +KK +I
Sbjct: 301 NNAGINDPVMVKGVAEYEMEQFDRVMSVNVRGVMLGIKHAARVMIPRKKGCII 459
Score = 50.6 bits (104), Expect = 1e-005
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA+GIG+A+ F ++G V + D ++E GR +A + + H D+
Sbjct: 61 GKVAIVTGGAAGIGEAIVRLFTKQGAKVIIADIADEAGRTLAESLSPAATFLHCDVSKEE 240
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 241 DITAAVDLA 267
Score = 42.8 bits (87), Expect(2) = 1e-004
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ LP SS S +T P K+ A PMP APPVT A +P
Sbjct: 185 ASVLPASSAMSAIMTLAPCFVKSRTMASPMPAAPPVTIATLP 60
Score = 22.6 bits (43), Expect(2) = 1e-004
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2 / -3
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
IPA L ISS S A S+LLTS + G
Sbjct: 314 IPALLYMISSCPCFSMAKSTAAVMSSSLLTSQCRKVAAG 198
>gb|CF664000.1|CF664000 RTCNT1_6_C08.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_6_C08_A029 5', mRNA sequence
Length = 456
Score = 51.0 bits (105), Expect = 1e-005
Identities = 26/96 (27%), Positives = 46/96 (47%)
Frame = +2 / +3
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS +++A + + Y LDI N AG ++
Sbjct: 165 IADVAEKAGRKLEESLSPAVATYVHCDVSKEKDVSAAVDVAMDKYGQLDIMYNNAGTNDR 344
Query: 524 TLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIM 631
LV + +NVN+ V+ G + A+++M
Sbjct: 345 FLVKSVVEYDMEQFDRVMNVNVKGVMHGIKHAARVM 452
Score = 44.1 bits (90), Expect = 0.001
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ F + G V + D +E+ GR++
Sbjct: 78 GKVAVVTGGAAGIGEAIVRLFIKHGAKVIIADVAEKAGRKL 200
Score = 36.8 bits (74), Expect(2) = 6e-004
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -2 / -3
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S +T P L A PMP APPVT+A P
Sbjct: 193 LPAFSATSAIMTLAPCLMNNRTMASPMPAAPPVTTATFP 77
Score = 26.3 bits (51), Expect(2) = 6e-004
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = -2 / -3
Query: 618 AMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCTCFSKQAARL 439
A +P +T FT + + + T L +PA L +SS Y+ S A
Sbjct: 439 ACLMPCITPFTFTFITRSNCSISYSTTLFTKNLSLVPALLYIMSSWPYLSMATSTAALTS 260
Query: 438 SALLTSHLT 412
+LLTS T
Sbjct: 259 FSLLTSQCT 233
>gb|CO176070.1|CO176070 NDL1_59_A09.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_59_A09_A029 5', mRNA sequence
Length = 803
Score = 51.0 bits (105), Expect = 1e-005
Identities = 26/113 (23%), Positives = 57/113 (50%)
Frame = +2 / +3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F+++ + + + E + + P++ F+ CDVS +++ A + ++ + LDI
Sbjct: 126 FTKQGAKVIIADIADEAGRTLAESLSPAATFLHCDVSKEEDITAAVDLAMEKHGQLDIMY 305
Query: 500 NCAGIANKTLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
N AGI + +V + ++VN+ V+ G + A+++M +KK +I
Sbjct: 306 NNAGINDPVMVKGVAEYEMEQFDRVMSVNVRGVMLGIKHAARVMIPRKKGCII 464
Score = 50.6 bits (104), Expect = 1e-005
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA+GIG+A+ F ++G V + D ++E GR +A + + H D+
Sbjct: 66 GKVAIVTGGAAGIGEAIVRLFTKQGAKVIIADIADEAGRTLAESLSPAATFLHCDVSKEE 245
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 246 DITAAVDLA 272
Score = 42.8 bits (87), Expect(2) = 1e-004
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ LP SS S +T P K+ A PMP APPVT A +P
Sbjct: 190 ASVLPASSAMSAIMTLAPCFVKSRTMASPMPAAPPVTIATLP 65
Score = 22.6 bits (43), Expect(2) = 1e-004
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2 / -2
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
IPA L ISS S A S+LLTS + G
Sbjct: 319 IPALLYMISSCPCFSMAKSTAAVMSSSLLTSQCRKVAAG 203
>gb|CO200922.1|CO200922 RTCNT2_2_A11.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_2_A11_A029 5', mRNA sequence
Length = 482
Score = 51.0 bits (105), Expect = 1e-005
Identities = 26/113 (23%), Positives = 57/113 (50%)
Frame = +2 / +3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F+++ + + + E + + P++ F+ CDVS +++ A + ++ + LDI
Sbjct: 111 FTKQGAKVIIADIADEAGRTLAESLSPAATFLHCDVSKEEDITAAVDLAMEKHGQLDIMY 290
Query: 500 NCAGIANKTLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
N AGI + +V + ++VN+ V+ G + A+++M +KK +I
Sbjct: 291 NNAGINDPVMVKGVAEYEMEQFDRVMSVNVRGVMLGIKHAARVMIPRKKGCII 449
Score = 50.6 bits (104), Expect = 1e-005
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA+GIG+A+ F ++G V + D ++E GR +A + + H D+
Sbjct: 51 GKVAIVTGGAAGIGEAIVRLFTKQGAKVIIADIADEAGRTLAESLSPAATFLHCDVSKEE 230
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 231 DITAAVDLA 257
Score = 42.3 bits (86), Expect(2) = 2e-004
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ LP SS S +T P K+ A PMP APPVT A +P
Sbjct: 175 ASVLPASSAMSAIMTLAPCFVKSRTIASPMPAAPPVTIATLP 50
Score = 22.6 bits (43), Expect(2) = 2e-004
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2 / -2
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
IPA L ISS S A S+LLTS + G
Sbjct: 304 IPALLYMISSCPCFSMAKSTAAVMSSSLLTSQCRKVAAG 188
>gb|CV031628.1|CV031628 RTNACL1_2_F02.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_2_F02_A029 5', mRNA sequence
Length = 732
Score = 51.0 bits (105), Expect = 1e-005
Identities = 26/113 (23%), Positives = 57/113 (50%)
Frame = +2 / +3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F+++ + + + E + + P++ F+ CDVS +++ A + ++ + LDI
Sbjct: 135 FTKQGAKVIIADIADEAGRTLAESLSPAATFLHCDVSKEEDITAAVDLAMEKHGQLDIMY 314
Query: 500 NCAGIANKTLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
N AGI + +V + ++VN+ V+ G + A+++M +KK +I
Sbjct: 315 NNAGINDPVMVKGVAEYEMEQFDRVMSVNVRGVMLGIKHAARVMIPRKKGCII 473
Score = 50.6 bits (104), Expect = 1e-005
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA+GIG+A+ F ++G V + D ++E GR +A + + H D+
Sbjct: 75 GKVAIVTGGAAGIGEAIVRLFTKQGAKVIIADIADEAGRTLAESLSPAATFLHCDVSKEE 254
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 255 DITAAVDLA 281
Score = 42.8 bits (87), Expect(2) = 1e-004
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ LP SS S +T P K+ A PMP APPVT A +P
Sbjct: 199 ASVLPASSAMSAIMTLAPCFVKSRTMASPMPAAPPVTIATLP 74
Score = 22.6 bits (43), Expect(2) = 1e-004
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2 / -3
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
IPA L ISS S A S+LLTS + G
Sbjct: 328 IPALLYMISSCPCFSMAKSTAAVMSSSLLTSQCRKVAAG 212
>gb|CV036407.1|CV036407 RTNACL1_59_C04.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_59_C04_A029 3', mRNA sequence
Length = 836
Score = 51.0 bits (105), Expect = 1e-005
Identities = 28/102 (27%), Positives = 48/102 (47%)
Frame = +2 / +3
Query: 353 LVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLV 532
+ +K K L + +V CDVS +++A + + Y LDI N AG + LV
Sbjct: 3 VAEKAGRKLEESLSPAVATYVHCDVSKEXDVSAAVDVAMDKYGQLDIMYNNAGTNDSFLV 182
Query: 533 YDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
+ +NVN+ V+ G + A+++M +KK +I
Sbjct: 183 KSVVEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKGCII 308
>gb|CX649229.1|CX649229 COLD1_33_G12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_33_G12_A029 5', mRNA sequence
Length = 752
Score = 51.0 bits (105), Expect = 1e-005
Identities = 26/113 (23%), Positives = 57/113 (50%)
Frame = +2 / +3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F+++ + + + E + + P++ F+ CDVS +++ A + ++ + LDI
Sbjct: 141 FTKQGAKVIIADIADEAGRTLAESLSPAATFLHCDVSKEEDITAAVDLAMEKHGQLDIMY 320
Query: 500 NCAGIANKTLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
N AGI + +V + ++VN+ V+ G + A+++M +KK +I
Sbjct: 321 NNAGINDPVMVKGVAEYEMEQFDRVMSVNVRGVMLGIKHAARVMIPRKKGCII 479
Score = 50.6 bits (104), Expect = 1e-005
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA+GIG+A+ F ++G V + D ++E GR +A + + H D+
Sbjct: 81 GKVAIVTGGAAGIGEAIVRLFTKQGAKVIIADIADEAGRTLAESLSPAATFLHCDVSKEE 260
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 261 DITAAVDLA 287
Score = 42.3 bits (86), Expect(2) = 2e-004
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ LP SS S +T P K+ A PMP APPVT A +P
Sbjct: 205 ASVLPASSAMSAIMTLAPCFVKSRTIASPMPAAPPVTIATLP 80
Score = 22.6 bits (43), Expect(2) = 2e-004
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2 / -2
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
IPA L ISS S A S+LLTS + G
Sbjct: 334 IPALLYMISSCPCFSMAKSTAAVMSSSLLTSQCRKVAAG 218
>gb|CX715235.1|CX715235 RTPQ1_32_E11.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_32_E11_A032 5', mRNA sequence
Length = 704
Score = 51.0 bits (105), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 165 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMFNNAGINDAVLVKSVAEYDMVEYDRVM 344
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 345 SVNVRGVMLGIKHAARVMIPRKKGSII 425
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 27 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 206
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 207 DISTVVDLA 233
Score = 39.1 bits (79), Expect(2) = 0.006
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 151 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 26
Score = 22.6 bits (43), Expect(2) = 0.006
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 412 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLNIISS 251
>gb|DR683582.1|DR683582 EST1073658 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAI91 3' end, mRNA sequence
Length = 676
Score = 51.0 bits (105), Expect = 1e-005
Identities = 26/113 (23%), Positives = 57/113 (50%)
Frame = +2 / +1
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F+++ + + + E + + P++ F+ CDVS +++ A + ++ + LDI
Sbjct: 175 FTKQGAKVIIADIADEAGRTLAESLSPAATFLHCDVSKEEDITAAVDLAMEKHGQLDIMY 354
Query: 500 NCAGIANKTLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
N AGI + +V + ++VN+ V+ G + A+++M +KK +I
Sbjct: 355 NNAGINDPVMVKGVAEYEMEQFDRVMSVNVRGVMLGIKHAARVMIPRKKGCII 513
Score = 50.6 bits (104), Expect = 1e-005
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA+GIG+A+ F ++G V + D ++E GR +A + + H D+
Sbjct: 115 GKVAIVTGGAAGIGEAIVRLFTKQGAKVIIADIADEAGRTLAESLSPAATFLHCDVSKEE 294
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 295 DITAAVDLA 321
Score = 42.8 bits (87), Expect(2) = 1e-004
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ LP SS S +T P K+ A PMP APPVT A +P
Sbjct: 239 ASVLPASSAMSAIMTLAPCFVKSRTMASPMPAAPPVTIATLP 114
Score = 22.6 bits (43), Expect(2) = 1e-004
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2 / -3
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
IPA L ISS S A S+LLTS + G
Sbjct: 368 IPALLYMISSCPCFSMAKSTAAVMSSSLLTSQCRKVAAG 252
>gb|DT631534.1|DT631534 EST1146465 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF979 3' end, mRNA sequence
Length = 893
Score = 51.0 bits (105), Expect = 1e-005
Identities = 26/113 (23%), Positives = 57/113 (50%)
Frame = +2 / +3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F+++ + + + E + + P++ F+ CDVS +++ A + ++ + LDI
Sbjct: 183 FTKQGAKVIIADIADEAGRTLAESLSPAATFLHCDVSKEEDITAAVDLAMEKHGQLDIMY 362
Query: 500 NCAGIANKTLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
N AGI + +V + ++VN+ V+ G + A+++M +KK +I
Sbjct: 363 NNAGINDPVMVKGVAEYEMEQFDRVMSVNVRGVMLGIKHAARVMIPRKKGCII 521
Score = 50.6 bits (104), Expect = 1e-005
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA+GIG+A+ F ++G V + D ++E GR +A + + H D+
Sbjct: 123 GKVAIVTGGAAGIGEAIVRLFTKQGAKVIIADIADEAGRTLAESLSPAATFLHCDVSKEE 302
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 303 DITAAVDLA 329
Score = 42.8 bits (87), Expect(2) = 1e-004
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ LP SS S +T P K+ A PMP APPVT A +P
Sbjct: 247 ASVLPASSAMSAIMTLAPCFVKSRTMASPMPAAPPVTIATLP 122
Score = 22.6 bits (43), Expect(2) = 1e-004
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2 / -2
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
IPA L ISS S A S+LLTS + G
Sbjct: 376 IPALLYMISSCPCFSMAKSTAAVMSSSLLTSQCRKVAAG 260
>gb|CF386022.1|CF386022 RTDR1_7_D01.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_7_D01_A015 5', mRNA
sequence
Length = 696
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 261 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 440
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 441 SVNVRGVMLGIKHAARVMIPRKKGSII 521
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 123 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 302
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 303 DISTVVDLA 329
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 247 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 122
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 508 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 347
>gb|CF386305.1|CF386305 RTDR1_13_C02.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_13_C02_A015 5', mRNA
sequence
Length = 673
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 236 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 415
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 416 SVNVRGVMLGIKHAARVMIPRKKGSII 496
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 98 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 277
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 278 DISTVVDLA 304
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 222 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 97
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 483 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 322
>gb|CF386779.1|CF386779 RTDR1_16_C09.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_16_C09_A015 5', mRNA
sequence
Length = 714
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 137 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 316
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 317 SVNVRGVMLGIKHAARVMIPRKKGSII 397
Score = 45.1 bits (92), Expect = 6e-004
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPSSIF 412
A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+ I
Sbjct: 8 AIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEEDIS 187
Query: 413 VKCDVS 430
D++
Sbjct: 188 TVVDLA 205
Score = 35.9 bits (72), Expect(2) = 0.040
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
A LP S KS +T P K+ A P+P APPVT A +
Sbjct: 123 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATL 1
Score = 23.1 bits (44), Expect(2) = 0.040
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 384 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 223
>gb|CF387232.1|CF387232 RTDR1_11_C09.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_11_C09_A015 5', mRNA
sequence
Length = 735
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 261 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 440
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 441 SVNVRGVMLGIKHAARVMIPRKKGSII 521
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 123 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 302
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 303 DISTVVDLA 329
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 247 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 122
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 508 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 347
>gb|CF387750.1|CF387750 RTDR1_19_B06.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_19_B06_A015 5', mRNA
sequence
Length = 647
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 231 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 410
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 411 SVNVRGVMLGIKHAARVMIPRKKGSII 491
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 93 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 272
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 273 DISTVVDLA 299
Score = 39.1 bits (79), Expect(2) = 0.004
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 217 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 92
Score = 23.1 bits (44), Expect(2) = 0.004
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 478 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 317
>gb|CF389476.1|CF389476 RTDR2_7_H06.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_7_H06_A021 5', mRNA
sequence
Length = 658
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 277 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 456
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 457 SVNVRGVMLGIKHAARVMIPRKKGSII 537
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 139 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 318
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 319 DISTVVDLA 345
Score = 38.2 bits (77), Expect(2) = 0.008
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A P
Sbjct: 263 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATFP 138
Score = 23.1 bits (44), Expect(2) = 0.008
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 524 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 363
>gb|CF390625.1|CF390625 RTDR2_20_F04.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_20_F04_A021 5', mRNA
sequence
Length = 751
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 145 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 324
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 325 SVNVRGVMLGIKHAARVMIPRKKGSII 405
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 7 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 186
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 187 DISTVVDLA 213
Score = 38.2 bits (77), Expect(2) = 0.009
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A P
Sbjct: 131 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATFP 6
Score = 23.1 bits (44), Expect(2) = 0.009
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 392 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 231
>gb|CF395697.1|CF395697 RTDS2_16_E10.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_16_E10_A021 5', mRNA sequence
Length = 708
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 275 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 454
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 455 SVNVRGVMLGIKHAARVMIPRKKGSII 535
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 137 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 316
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 317 DISTVVDLA 343
Score = 38.2 bits (77), Expect(2) = 0.009
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A P
Sbjct: 261 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATFP 136
Score = 23.1 bits (44), Expect(2) = 0.009
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 522 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 361
>gb|CF400161.1|CF400161 RTWW1_3_H09.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_3_H09_A015 5', mRNA sequence
Length = 733
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 258 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 437
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 438 SVNVRGVMLGIKHAARVMIPRKKGSII 518
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 120 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 299
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 300 DISTVVDLA 326
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 244 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 119
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 505 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 344
>gb|CF401147.1|CF401147 RTWW1_10_H05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_10_H05_A015 5', mRNA sequence
Length = 632
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 173 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 352
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 353 SVNVRGVMLGIKHAARVMIPRKKGSII 433
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 35 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 214
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 215 DISTVVDLA 241
Score = 39.1 bits (79), Expect(2) = 0.004
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 159 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 34
Score = 23.1 bits (44), Expect(2) = 0.004
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 420 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 259
>gb|CF401702.1|CF401702 RTWW1_14_F02.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_14_F02_A015 5', mRNA sequence
Length = 716
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 262 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 441
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 442 SVNVRGVMLGIKHAARVMIPRKKGSII 522
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 124 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 303
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 304 DISTVVDLA 330
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 248 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 123
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 509 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 348
>gb|CF402882.1|CF402882 RTWW1_23_C07.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_23_C07_A015 5', mRNA sequence
Length = 726
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 260 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 439
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 440 SVNVRGVMLGIKHAARVMIPRKKGSII 520
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 122 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 301
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 302 DISTVVDLA 328
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 246 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 121
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 507 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 346
>gb|CF403088.1|CF403088 RTWW1_24_H08.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_24_H08_A015 5', mRNA sequence
Length = 719
Score = 50.6 bits (104), Expect = 1e-005
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +2 / +1
Query: 563 WRHAVNVNLVAVIDGTRIASQIMRNQKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMF 742
W +N N+V V++ Q M +Q+ P V+IN GS G+ +P Y+A+K V
Sbjct: 280 WTEVLNTNVVGVLNVQHTFVQSMLHQENPSVVINTGSKQGITNPPGNPAYNASKAAVKSI 459
Query: 743 TRSL 754
T SL
Sbjct: 460 TESL 471
>gb|CF474770.1|CF474770 RTWW2_7_D07.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_7_D07_A021 5', mRNA sequence
Length = 722
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 256 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 435
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 436 SVNVRGVMLGIKHAARVMIPRKKGSII 516
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 118 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 297
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 298 DISTVVDLA 324
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 242 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 117
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 503 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 342
>gb|CF475375.1|CF475375 RTWW2_13_G10.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_13_G10_A021 5', mRNA sequence
Length = 687
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 95 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 274
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 275 SVNVRGVMLGIKHAARVMIPRKKGSII 355
>gb|CF475645.1|CF475645 RTWW2_11_A07.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_11_A07_A021 5', mRNA sequence
Length = 696
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 261 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 440
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 441 SVNVRGVMLGIKHAARVMIPRKKGSII 521
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 123 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 302
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 303 DISTVVDLA 329
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 247 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 122
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 508 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 347
>gb|CF477607.1|CF477607 RTWW3_8_E05.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_8_E05_A022 5', mRNA sequence
Length = 709
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 234 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 413
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 414 SVNVRGVMLGIKHAARVMIPRKKGSII 494
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 96 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 275
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 276 DISTVVDLA 302
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 220 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 95
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 481 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 320
>gb|CF478690.1|CF478690 RTWW3_16_E10.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_16_E10_A022 5', mRNA sequence
Length = 684
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 229 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 408
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 409 SVNVRGVMLGIKHAARVMIPRKKGSII 489
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 91 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 270
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 271 DISTVVDLA 297
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 215 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 90
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 476 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 315
>gb|CF479481.1|CF479481 RTWW3_22_E07.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_22_E07_A022 5', mRNA sequence
Length = 767
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 57 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 236
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 237 SVNVRGVMLGIKHAARVMIPRKKGSII 317
>gb|CF668355.1|CF668355 RTCNT1_36_B02.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_B02_A029 3', mRNA sequence
Length = 691
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / -2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 435 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 256
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 255 SVNVRGVMLGIKHAARVMIPRKKGSII 175
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 573 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 394
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 393 DISTVVDLA 367
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / +2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 449 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 574
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / +2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 188 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 349
>gb|CO198810.1|CO198810 GEO1_16_F03.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_16_F03_A029 5', mRNA sequence
Length = 540
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 72 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 251
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 252 SVNVRGVMLGIKHAARVMIPRKKGSII 332
>gb|CO200019.1|CO200019 GEO2_5_A04.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_5_A04_A032 3', mRNA sequence
Length = 906
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / -3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 625 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 446
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 445 SVNVRGVMLGIKHAARVMIPRKKGSII 365
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / -3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 763 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 584
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 583 DISTVVDLA 557
Score = 39.1 bits (79), Expect(2) = 0.006
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / +3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 639 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 764
Score = 23.1 bits (44), Expect(2) = 0.006
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / +3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 378 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 539
>gb|CO200029.1|CO200029 GEO2_5_B04.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_5_B04_A032 3', mRNA sequence
Length = 858
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / -3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 577 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 398
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 397 SVNVRGVMLGIKHAARVMIPRKKGSII 317
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / -3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 715 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 536
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 535 DISTVVDLA 509
Score = 39.1 bits (79), Expect(2) = 0.006
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / +3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 591 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 716
Score = 23.1 bits (44), Expect(2) = 0.006
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / +3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 330 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 491
>gb|CO200100.1|CO200100 GEO2_5_A04.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_5_A04_A032 5', mRNA sequence
Length = 868
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / -1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 868 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 689
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 688 SVNVRGVMLGIKHAARVMIPRKKGSII 608
>gb|CO200175.1|CO200175 GEO2_5_G12.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_5_G12_A032 5', mRNA sequence
Length = 795
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 261 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 440
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 441 SVNVRGVMLGIKHAARVMIPRKKGSII 521
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 123 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 302
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 303 DISTVVDLA 329
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 247 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 122
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 508 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 347
>gb|CV031655.1|CV031655 RTNACL1_2_H05.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_2_H05_A029 5', mRNA sequence
Length = 737
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 261 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 440
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 441 SVNVRGVMLGIKHAARVMIPRKKGSII 521
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 123 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 302
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 303 DISTVVDLA 329
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 247 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 122
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 508 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 347
>gb|CX647479.1|CX647479 COLD1_16_E12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_16_E12_A029 5', mRNA sequence
Length = 641
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 239 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 418
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 419 SVNVRGVMLGIKHAARVMIPRKKGSII 499
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 101 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 280
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 281 DISTVVDLA 307
Score = 39.1 bits (79), Expect(2) = 0.004
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 225 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 100
Score = 23.1 bits (44), Expect(2) = 0.004
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 486 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 325
>gb|CX712480.1|CX712480 RTPQ1_2_F09.g2_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_2_F09_A032 5', mRNA sequence
Length = 689
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 253 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 432
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 433 SVNVRGVMLGIKHAARVMIPRKKGSII 513
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 115 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 294
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 295 DISTVVDLA 321
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 239 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 114
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 500 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 339
>gb|CX712493.1|CX712493 RTPQ1_2_G11.g2_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_2_G11_A032 5', mRNA sequence
Length = 856
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 279 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 458
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 459 SVNVRGVMLGIKHAARVMIPRKKGSII 539
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 141 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 320
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 321 DISTVVDLA 347
Score = 39.1 bits (79), Expect(2) = 0.006
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 265 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 140
Score = 23.1 bits (44), Expect(2) = 0.006
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 526 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 365
>gb|DR050422.1|DR050422 RTBOR1_23_H08.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_23_H08_A029 3', mRNA sequence
Length = 760
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / -1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 475 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 296
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 295 SVNVRGVMLGIKHAARVMIPRKKGSII 215
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / -1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 613 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 434
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 433 DISTVVDLA 407
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / +3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 489 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 614
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / +3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 228 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 389
>gb|DR058962.1|DR058962 RTNIT1_14_H10.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_14_H10_A029 5', mRNA sequence
Length = 545
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 261 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 440
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 441 SVNVRGVMLGIKHAARVMIPRKKGSII 521
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 123 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 302
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 303 DISTVVDLA 329
Score = 39.1 bits (79), Expect(2) = 0.004
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 247 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 122
Score = 23.1 bits (44), Expect(2) = 0.004
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 508 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 347
>gb|DR069420.1|DR069420 RTDK1_7_E03.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_7_E03_A029 3', mRNA sequence
Length = 829
Score = 50.6 bits (104), Expect = 1e-005
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +2 / +1
Query: 563 WRHAVNVNLVAVIDGTRIASQIMRNQKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMF 742
W +N N+V V++ Q M +Q+ P V+IN GS G+ +P Y+A+K V
Sbjct: 142 WTEVLNTNVVGVLNVQHTFVQSMLHQENPSVVINTGSKQGITNPPGNPAYNASKAAVKSI 321
Query: 743 TRSL 754
T SL
Sbjct: 322 TESL 333
>gb|DR070690.1|DR070690 RTDK1_15_A12.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_15_A12_A029 3', mRNA sequence
Length = 785
Score = 50.6 bits (104), Expect = 1e-005
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +2 / +3
Query: 563 WRHAVNVNLVAVIDGTRIASQIMRNQKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMF 742
W +N N+V V++ Q M +Q+ P V+IN GS G+ +P Y+A+K V
Sbjct: 84 WTEVLNTNVVGVLNVQHTFVQSMLHQENPSVVINTGSKQGITNPPGNPAYNASKAAVKSI 263
Query: 743 TRSL 754
T SL
Sbjct: 264 TESL 275
>gb|DR079085.1|DR079085 RTFEPL1_9_B01.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_B01_A029 3', mRNA sequence
Length = 894
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / -2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 569 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 390
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 389 SVNVRGVMLGIKHAARVMIPRKKGSII 309
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 707 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 528
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 527 DISTVVDLA 501
Score = 38.2 bits (77), Expect(2) = 0.011
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / +1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A P
Sbjct: 583 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATFP 708
Score = 23.1 bits (44), Expect(2) = 0.011
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / +1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 322 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 483
>gb|DR079160.1|DR079160 RTFEPL1_9_B01.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_B01_A029 5', mRNA sequence
Length = 894
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / -1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 831 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 652
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 651 SVNVRGVMLGIKHAARVMIPRKKGSII 571
>gb|DR111152.1|DR111152 RTS1_15_E12.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_15_E12_A029 5', mRNA sequence
Length = 781
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 263 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 442
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 443 SVNVRGVMLGIKHAARVMIPRKKGSII 523
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 125 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 304
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 305 DISTVVDLA 331
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 249 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 124
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 510 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 349
>gb|DR168384.1|DR168384 RTPHOS1_25_C08.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_25_C08_A029 3', mRNA sequence
Length = 723
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / -1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 432 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 253
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 252 SVNVRGVMLGIKHAARVMIPRKKGSII 172
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / -1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 570 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 391
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 390 DISTVVDLA 364
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / +2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 446 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 571
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / +2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 185 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 346
>gb|DR742155.1|DR742155 RTCU1_2_D01.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_2_D01_A029 3', mRNA sequence
Length = 652
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / -2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 372 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 193
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 192 SVNVRGVMLGIKHAARVMIPRKKGSII 112
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 510 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 331
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 330 DISTVVDLA 304
Score = 39.1 bits (79), Expect(2) = 0.004
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / +2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 386 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 511
Score = 23.1 bits (44), Expect(2) = 0.004
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / +2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 125 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 286
>gb|DR742298.1|DR742298 RTCU1_3_D02.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_3_D02_A029 3', mRNA sequence
Length = 642
Score = 50.6 bits (104), Expect = 1e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / -2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 362 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 183
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 182 SVNVRGVMLGIKHAARVMIPRKKGSII 102
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 500 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 321
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 320 DISTVVDLA 294
Score = 39.1 bits (79), Expect(2) = 0.004
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / +1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 376 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 501
Score = 23.1 bits (44), Expect(2) = 0.004
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / +1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 115 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 276
>gb|CF477216.1|CF477216 RTWW3_6_F07.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_6_F07_A022 5', mRNA sequence
Length = 692
Score = 50.1 bits (103), Expect = 2e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 226 PSATYVHCDVSKEEDISTVVDFAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 405
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 406 SVNVRGVMLGIKHAARVMIPRKKGSII 486
Score = 45.5 bits (93), Expect = 5e-004
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 88 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDV 255
Score = 38.2 bits (77), Expect(2) = 0.009
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A P
Sbjct: 212 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATFP 87
Score = 23.1 bits (44), Expect(2) = 0.009
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -1
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 473 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 312
>gb|CF477289.1|CF477289 RTWW3_6_C04.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_6_C04_A022 5', mRNA sequence
Length = 693
Score = 50.1 bits (103), Expect = 2e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 258 PSATYVHCDVSKEEDISTVVDFAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 437
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 438 SVNVRGVMLGIKHAARVMIPRKKGSII 518
Score = 45.5 bits (93), Expect = 5e-004
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 120 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDV 287
Score = 38.2 bits (77), Expect(2) = 0.009
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A P
Sbjct: 244 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATFP 119
Score = 23.1 bits (44), Expect(2) = 0.009
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 505 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 344
>gb|CF478525.1|CF478525 RTWW3_20_C04.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_20_C04_A022 5', mRNA sequence
Length = 727
Score = 50.1 bits (103), Expect = 2e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 262 PSATYVHCDVSKEEDISTVVDFAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 441
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 442 SVNVRGVMLGIKHAARVMIPRKKGSII 522
Score = 45.5 bits (93), Expect = 5e-004
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 124 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDV 291
Score = 38.2 bits (77), Expect(2) = 0.009
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A P
Sbjct: 248 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATFP 123
Score = 23.1 bits (44), Expect(2) = 0.009
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 509 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 348
>gb|CF479675.1|CF479675 RTWW3_11_E11.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_11_E11_A022 5', mRNA sequence
Length = 671
Score = 50.1 bits (103), Expect = 2e-005
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 236 PSATYVHCDVSKEEDISTVVDFAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 415
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 416 SVNVRGVMLGIKHAARVMIPRKKGSII 496
Score = 45.5 bits (93), Expect = 5e-004
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 98 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDV 265
Score = 38.2 bits (77), Expect(2) = 0.008
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A P
Sbjct: 222 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATFP 97
Score = 23.1 bits (44), Expect(2) = 0.008
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 483 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 322
>gb|DR688709.1|DR688709 EST1078794 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC960 3' end, mRNA sequence
Length = 756
Score = 50.1 bits (103), Expect = 2e-005
Identities = 25/87 (28%), Positives = 46/87 (52%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS + ++ + ++ + LDI N AGI + LV + +
Sbjct: 307 PSATYVHCDVSKEEGISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 486
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 487 SVNVRGVMLGIKHAARVMIPRKKGSII 567
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 169 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 348
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 349 GISTVVDLA 375
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 293 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 168
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -2
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 554 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 393
>gb|DT635168.1|DT635168 EST1150099 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGD88 3' end, mRNA sequence
Length = 786
Score = 50.1 bits (103), Expect = 2e-005
Identities = 25/87 (28%), Positives = 46/87 (52%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS + ++ + ++ + LDI N AGI + LV + +
Sbjct: 315 PSATYVHCDVSKEEGISTVVDLAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 494
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
+VN+ V+ G + A+++M +KK +I
Sbjct: 495 SVNVRGVMLGIKHAARVMIPRKKGSII 575
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 177 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 356
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 357 GISTVVDLA 383
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 301 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 176
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
FF I A +PS+T FTL + + + T IPA L ISS
Sbjct: 562 FFLGIITRAACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 401
>gb|CX715896.1|CX715896 RTPQ1_37_E09.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_37_E09_A032 5', mRNA sequence
Length = 706
Score = 40.0 bits (81), Expect(2) = 2e-005
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2 / +3
Query: 215 LKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
L G ++TG A GIG++ + FA+ G V V D E+ + VA
Sbjct: 105 LLAGEVVIITGAAQGIGRSAAVIFAKEGAKVVVSDLDEKKAQLVA 239
Score = 35.0 bits (70), Expect = 0.69
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
ATS F S +S T T P LAK + P+P A PV P
Sbjct: 238 ATS*AFFSSRSLTTTFAPSLAKMTAALLPIPWAAPVMITTSP 113
Score = 30.4 bits (60), Expect(2) = 2e-005
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 629 MRNQKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
++ K+ IIN+ S +GL+ Y+AAK V+ T++++
Sbjct: 489 IKGNKENRSIINVSSVSGLHGNVGQANYAAAKAAVIGLTKTIA 617
>gb|CO369206.1|CO369206 RTK1_45_D07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_45_D07_A029 5', mRNA sequence
Length = 401
Score = 49.2 bits (101), Expect = 4e-005
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G +A + + H D+
Sbjct: 119 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGNSLAEQLSPSATYVHCDVSKEE 298
Query: 404 SIFVKCDVS 430
IF D++
Sbjct: 299 DIFTVVDLA 325
Score = 39.1 bits (79), Expect = 0.040
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 243 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 118
Score = 37.3 bits (75), Expect = 0.14
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLV 532
PS+ +V CDVS +++ + ++ + LDI N AGI + LV
Sbjct: 257 PSATYVHCDVSKEEDIFTVVDLAMEKHGQLDIMYNNAGINDAVLV 391
>gb|CO173029.1|CO173029 NDL1_33_C02.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_33_C02_A029 5', mRNA sequence
Length = 737
Score = 48.7 bits (100), Expect = 5e-005
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A+VTGGA+GIG+A+ F + G V + D ++E GR +A + + H D+
Sbjct: 172 GKVAIVTGGAAGIGEAIVRLFTKHGAKVIIADIADEAGRTLAESLSPAATFLHCDV 339
Score = 46.0 bits (94), Expect = 3e-004
Identities = 24/113 (21%), Positives = 52/113 (46%)
Frame = +2 / +1
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ + + + E + + P++ F+ CDVS ++++A + ++ + LDI
Sbjct: 232 FTKHGAKVIIADIADEAGRTLAESLSPAATFLHCDVSKEEDMSAAVDLAIEKHGQLDIMF 411
Query: 500 NCAGIANKTLVYDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
N AG V + + VN+ + G + A+++M +KK +I
Sbjct: 412 NNAGTIEIVAVGSVAEYEVEQFDRVMRVNVRGTMLGIKHAARVMIPRKKGTII 570
Score = 42.8 bits (87), Expect(2) = 7e-005
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ LP SS S +T P K+ A PMP APPVT A +P
Sbjct: 296 ASVLPASSAMSAIMTLAPCFVKSRTMASPMPAAPPVTIATLP 171
Score = 23.5 bits (45), Expect(2) = 7e-005
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2 / -1
Query: 531 TSVLLAIPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
T+ + +PA L ISS S A S+LLTS + G
Sbjct: 443 TATISIVPALLNMISSCPCFSMAKSTAALMSSSLLTSQCRKVAAG 309
>gb|DR692403.1|DR692403 EST1082491 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADL74 3' end, mRNA sequence
Length = 809
Score = 34.5 bits (69), Expect(2) = 5e-005
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2 / +1
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+I K D++N +A F+ QT+ + I ++CAG+
Sbjct: 463 AISCKADIANPSQIAQLFDIAEQTFGSVHILVHCAGV 573
Score = 32.2 bits (64), Expect(2) = 5e-005
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A+VTG + GIGK + I A +G V V
Sbjct: 286 GRVAIVTGASGGIGKDIAIHLAEKGAKVVV 375
>gb|DR682364.1|DR682364 EST1072439 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA941 3' end, mRNA sequence
Length = 765
Score = 34.5 bits (69), Expect(2) = 5e-005
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2 / +2
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+I K D++N +A F+ QT+ + I ++CAG+
Sbjct: 461 AISCKADIANPSQIAQLFDIAEQTFGSVHILVHCAGV 571
Score = 32.2 bits (64), Expect(2) = 5e-005
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A+VTG + GIGK + I A +G V V
Sbjct: 284 GRVAIVTGASGGIGKDIAIHLAEKGAKVVV 373
>gb|DR113064.1|DR113064 RTS1_32_F04.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_32_F04_A029 5', mRNA sequence
Length = 573
Score = 48.3 bits (99), Expect = 7e-005
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2 / +3
Query: 203 GEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
G + G A++TGGA GIG+A+ F G V + D S+E G+++A + + H
Sbjct: 162 GSKQRLEGKVAIITGGAMGIGEAIVRLFTNHGAKVIIADLSDEVGKKLAESLSPSATYVH 341
Query: 383 GDL 391
D+
Sbjct: 342 CDV 350
Score = 40.0 bits (81), Expect(2) = 0.001
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPAQ 196
A+ LP SS++S +T P K+ A P+P APPV A P P +
Sbjct: 307 ASFLPTSSDRSAIMTLAP*FVKSRTMASPIPMAPPVIIATFPSSRCFDPLE 155
Score = 37.3 bits (75), Expect = 0.14
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2 / +3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F+ + + + E K + PS+ +V CDVS ++ A + ++ + LDI
Sbjct: 243 FTNHGAKVIIADLSDEVGKKLAESLSPSATYVHCDVSKEQDVKAVVDLAIEKHGQLDIMY 422
Query: 500 NCAGI 514
N AGI
Sbjct: 423 NNAGI 437
Score = 22.1 bits (42), Expect(2) = 0.001
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2 / -3
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
IPA L ISS S A +LLTS T + +G
Sbjct: 436 IPALLYMISS*PCFSMAKSTTALTSCSLLTSQCT*VAEG 320
>gb|CF400472.1|CF400472 RTWW1_5_C03.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_5_C03_A015 5', mRNA sequence
Length = 766
Score = 34.5 bits (69), Expect(2) = 9e-005
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2 / +3
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+I K D++N +A F+ QT+ + I ++CAG+
Sbjct: 621 AISCKADIANPSQIAQLFDIAEQTFGSVHILVHCAGV 731
Score = 31.3 bits (62), Expect(2) = 9e-005
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A+VTG + GIGK + I A +G V V
Sbjct: 444 GRVAIVTGASGGIGKDIAIHLAGKGAKVVV 533
>gb|CO173859.1|CO173859 NDL1_39_H04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_39_H04_A029 5', mRNA sequence
Length = 640
Score = 47.8 bits (98), Expect = 9e-005
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A++TGGA+GIG A+ F + G V + D ++E G+ +A + + H D+
Sbjct: 49 GKVAIITGGAAGIGDAIVRLFTKHGAKVIIADIADEAGKNLAESLSPPATYVHCDVTKEE 228
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 229 DISAAVDLA 255
Score = 38.6 bits (78), Expect = 0.054
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP SS S +T P K+ A PMP APPV A +P
Sbjct: 173 AKFLPASSAMSAIMTLAPCFVKSRTIASPMPAAPPVIIATLP 48
Score = 35.0 bits (70), Expect = 0.69
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +2 / +1
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ + + + E K + P + +V CDV+ ++++A + ++ + LDI
Sbjct: 109 FTKHGAKVIIADIADEAGKNLAESLSPPATYVHCDVTKEEDISAAVDLAMEKHGQLDIMY 288
Query: 500 NCAG 511
N AG
Sbjct: 289 NNAG 300
>gb|CO174700.1|CO174700 NDL1_45_E10.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_45_E10_A029 5', mRNA sequence
Length = 725
Score = 47.8 bits (98), Expect = 9e-005
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A++TGGA+GIG A+ F + G V + D ++E G+ +A + + H D+
Sbjct: 52 GKVAIITGGAAGIGDAIVRLFTKHGAKVIIADIADEAGKNLAESLSPPATYVHCDVTKEE 231
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 232 DISAAVDLA 258
Score = 38.6 bits (78), Expect = 0.054
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP SS S +T P K+ A PMP APPV A +P
Sbjct: 176 AKFLPASSAMSAIMTLAPCFVKSRTIASPMPAAPPVIIATLP 51
Score = 35.0 bits (70), Expect = 0.69
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +2 / +1
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ + + + E K + P + +V CDV+ ++++A + ++ + LDI
Sbjct: 112 FTKHGAKVIIADIADEAGKNLAESLSPPATYVHCDVTKEEDISAAVDLAMEKHGQLDIMY 291
Query: 500 NCAG 511
N AG
Sbjct: 292 NNAG 303
>gb|CV034552.1|CV034552 RTNACL1_9_H12.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_9_H12_A029 5', mRNA sequence
Length = 683
Score = 47.8 bits (98), Expect = 9e-005
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2 / +1
Query: 203 GEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
G + G A++TGGA GIG+A+ F G V + D S+E G+++A + + H
Sbjct: 103 GSKQRLEGKVAIITGGAMGIGEAIVRLFTNHGAKVIIADLSDEVGKKLAESLSPSATYAH 282
Query: 383 GDL 391
D+
Sbjct: 283 CDV 291
Score = 40.0 bits (81), Expect = 0.021
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPAQ 196
A+ LP SS++S +T P K+ A P+P APPV A P P +
Sbjct: 248 ASFLPTSSDRSAIMTLAP*FVKSRTMASPIPMAPPVIIATFPSSRCFDPLE 96
Score = 35.4 bits (71), Expect = 0.50
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2 / +1
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F+ + + + E K + PS+ + CDVS ++ A + ++ + LDI
Sbjct: 184 FTNHGAKVIIADLSDEVGKKLAESLSPSATYAHCDVSKEQDVKAVVDLAIEKHGQLDIMY 363
Query: 500 NCAGI 514
N AGI
Sbjct: 364 NNAGI 378
>gb|CV035131.1|CV035131 RTNACL1_13_G03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_13_G03_A029 5', mRNA sequence
Length = 730
Score = 47.8 bits (98), Expect = 9e-005
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2 / +3
Query: 203 GEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
G + G A++TGGA GIG+A+ F G V + D S+E G+++A + + H
Sbjct: 162 GSKQRLEGKVAIITGGAMGIGEAIVRLFTNHGAKVIIADLSDEVGKKLAESLSPSATYAH 341
Query: 383 GDL 391
D+
Sbjct: 342 CDV 350
Score = 40.0 bits (81), Expect = 0.021
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPAQ 196
A+ LP SS++S +T P K+ A P+P APPV A P P +
Sbjct: 307 ASFLPTSSDRSAIMTLAP*FVKSRTMASPIPMAPPVIIATFPSSRCFDPLE 155
Score = 35.4 bits (71), Expect = 0.50
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2 / +3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F+ + + + E K + PS+ + CDVS ++ A + ++ + LDI
Sbjct: 243 FTNHGAKVIIADLSDEVGKKLAESLSPSATYAHCDVSKEQDVKAVVDLAIEKHGQLDIMY 422
Query: 500 NCAGI 514
N AGI
Sbjct: 423 NNAGI 437
>gb|DR069528.1|DR069528 RTDK1_7_F10.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_7_F10_A029 5', mRNA sequence
Length = 898
Score = 47.8 bits (98), Expect = 9e-005
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2 / +3
Query: 203 GEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
G + G A++TGGA GIG+A+ F G V + D S+E G+++A + + H
Sbjct: 27 GSKQRLEGKVAIITGGAMGIGEAIVRLFTNHGAKVIIADLSDEVGKKLAESLSPSATYAH 206
Query: 383 GDL 391
D+
Sbjct: 207 CDV 215
Score = 40.0 bits (81), Expect = 0.021
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPAQ 196
A+ LP SS++S +T P K+ A P+P APPV A P P +
Sbjct: 172 ASFLPTSSDRSAIMTLAP*FVKSRTMASPIPMAPPVIIATFPSSRCFDPLE 20
Score = 35.4 bits (71), Expect = 0.50
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2 / +3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F+ + + + E K + PS+ + CDVS ++ A + ++ + LDI
Sbjct: 108 FTNHGAKVIIADLSDEVGKKLAESLSPSATYAHCDVSKEQDVKAVVDLAIEKHGQLDIMY 287
Query: 500 NCAGI 514
N AGI
Sbjct: 288 NNAGI 302
>gb|DR092503.1|DR092503 STRR1_1_F08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_F08_A033 5', mRNA sequence
Length = 909
Score = 47.8 bits (98), Expect = 9e-005
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A++TGGA+GIG A+ F + G V + D ++E G+ +A + + H D+
Sbjct: 65 GKVAIITGGAAGIGDAIVRLFTKHGAKVIIADIADEAGKNLAESLSPPATYVHCDVTKEE 244
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 245 DISAAVDLA 271
Score = 38.6 bits (78), Expect = 0.054
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP SS S +T P K+ A PMP APPV A +P
Sbjct: 189 AKFLPASSAMSAIMTLAPCFVKSRTIASPMPAAPPVIIATLP 64
Score = 35.0 bits (70), Expect = 0.69
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +2 / +2
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ + + + E K + P + +V CDV+ ++++A + ++ + LDI
Sbjct: 125 FTKHGAKVIIADIADEAGKNLAESLSPPATYVHCDVTKEEDISAAVDLAMEKHGQLDIMY 304
Query: 500 NCAG 511
N AG
Sbjct: 305 NNAG 316
>gb|DR743660.1|DR743660 RTCU1_17_H06.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_17_H06_A029 3', mRNA sequence
Length = 727
Score = 47.8 bits (98), Expect = 9e-005
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2 / -2
Query: 203 GEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
G + G A++TGGA GIG+A+ F G V + D S+E G+++A + + H
Sbjct: 648 GSKQRLEGKVAIITGGAMGIGEAIVRLFTNHGAKVIIADLSDEVGKKLAESLSPSATYAH 469
Query: 383 GDL 391
D+
Sbjct: 468 CDV 460
Score = 40.0 bits (81), Expect = 0.021
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -2 / +2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPAQ 196
A+ LP SS++S +T P K+ A P+P APPV A P P +
Sbjct: 503 ASFLPTSSDRSAIMTLAP*FVKSRTMASPIPMAPPVIIATFPSSRCFDPLE 655
Score = 35.4 bits (71), Expect = 0.50
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2 / -2
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F+ + + + E K + PS+ + CDVS ++ A + ++ + LDI
Sbjct: 567 FTNHGAKVIIADLSDEVGKKLAESLSPSATYAHCDVSKEQDVKAVVDLAIEKHGQLDIMY 388
Query: 500 NCAGI 514
N AGI
Sbjct: 387 NNAGI 373
>gb|CF665807.1|CF665807 RTCNT1_18_D01.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_18_D01_A029 5', mRNA sequence
Length = 229
Score = 47.3 bits (97), Expect = 1e-004
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +2 / +2
Query: 203 GEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
G L G A++TG A G+G+A+ F ++G V + D ++E+G+ +A + + H
Sbjct: 41 GSQRLLEGKVAIITGAAMGLGEAIARLFTKQGARVIIADIADESGKNLAESLCPPATYLH 220
Query: 383 GDL 391
D+
Sbjct: 221 CDV 229
>gb|DR078833.1|DR078833 RTFEPL1_7_D07.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_7_D07_A029 3', mRNA sequence
Length = 868
Score = 45.5 bits (93), Expect(2) = 2e-004
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G AL+TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 828 GKVALITGGASGIGEASAKLFVENGAQVVIADIQDDLGNCLAKSLSPNACYFHCDV 661
Score = 35.4 bits (71), Expect = 0.50
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -2 / +2
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPA 199
++A P SS S T P + A PMP APPV A +P +S A
Sbjct: 698 DLAKQFPRSS*MSAITTCAPFSTNNLALASPMPLAPPVIRATLPSSLILSTA 853
Score = 32.2 bits (64), Expect = 4.6
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2 / -2
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F E + V +Q + P++ + CDVS +++A + V+ + LDI
Sbjct: 768 FVENGAQVVIADIQDDLGNCLAKSLSPNACYFHCDVSKETDVSALVDYTVEKHGHLDIMF 589
Query: 500 NCAGI 514
+ AGI
Sbjct: 588 SNAGI 574
Score = 22.1 bits (42), Expect(2) = 2e-004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / -2
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 327 LAQHGIRVNCVSP 289
>gb|DR021146.1|DR021146 STRS1_42_D06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_42_D06_A034 5', mRNA sequence
Length = 647
Score = 45.5 bits (93), Expect(2) = 2e-004
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A++TGGA GIG+A+ F + G V + D ++E G ++A + + H D+
Sbjct: 92 GKVAIITGGAMGIGEAIVRLFTKHGAKVIIADIADEVGSKMADSLSPGATYVHCDVSKEE 271
Query: 404 SIFVKCDVS 430
+ D++
Sbjct: 272 EVSAAVDLA 298
Score = 38.2 bits (77), Expect(2) = 0.020
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP SS S +T P K+ A PMP APPV A +P
Sbjct: 216 AILLPTSSAMSAIMTLAPCFVKSRTMASPMPIAPPVIIATLP 91
Score = 21.7 bits (41), Expect(2) = 2e-004
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 761 LKRHGVRVNVLCP 799
L ++G+RVNV+ P
Sbjct: 587 LGKYGIRVNVVSP 625
Score = 21.7 bits (41), Expect(2) = 0.020
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2 / -3
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
+PA L IS+ S A S+LLTS T + G
Sbjct: 345 VPALLYMISTCPCFSMAKSTAALTSSSLLTSQCT*VAPG 229
>gb|CX648630.1|CX648630 COLD1_29_H09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_29_H09_A029 5', mRNA sequence
Length = 714
Score = 35.4 bits (71), Expect(2) = 2e-004
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2 / +2
Query: 638 QKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
+K+ G +INI S GL YSAAK GV+ T++++
Sbjct: 515 KKRKGRVINIASVVGLTGNIGQANYSAAKAGVIGLTKTVA 634
Score = 31.8 bits (63), Expect(2) = 2e-004
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTV 313
A+VTG + GIGKA+ ++ R G V V
Sbjct: 146 AVVTGASRGIGKAIALSLGRAGCKVLV 226
>gb|CX648309.1|CX648309 COLD1_27_G06.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_27_G06_A029 5', mRNA sequence
Length = 775
Score = 44.6 bits (91), Expect = 9e-004
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TGGASGIG+ + F + G V + D ++E G+ +A
Sbjct: 103 GKVAIITGGASGIGEGIVRLFTKHGARVIIADIADETGKILA 228
Score = 44.1 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2 / +1
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ R + + E K + P + +V+CDVS +++A + ++ Y LDI
Sbjct: 163 FTKHGARVIIADIADETGKILAESLSPPATYVRCDVSKEQDVSAAVDLAMEKYAQLDIMF 342
Query: 500 NCAGIAN 520
N AGI +
Sbjct: 343 NNAGIVD 363
Score = 38.6 bits (78), Expect(2) = 2e-004
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP SS S +T P K+ PMP+APPV A +P
Sbjct: 227 ARILPVSSAMSAIMTLAPCFVKSRTMPSPMPDAPPVIIATLP 102
Score = 26.3 bits (51), Expect(2) = 2e-004
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2 / -3
Query: 531 TSVLLAIPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
T + IPA L ISS Y S A +LLTS T + G
Sbjct: 374 TLTVSTIPALLNMISSCAYFSMAKSTAALTSCSLLTSQRT*VAGG 240
>gb|CF402929.1|CF402929 RTWW1_23_A11.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_23_A11_A015 5', mRNA sequence
Length = 734
Score = 44.6 bits (91), Expect = 9e-004
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TGGASGIG+ + F + G V + D ++E G+ +A
Sbjct: 59 GKVAIITGGASGIGEGIVRLFTKHGARVIIADIADETGKILA 184
Score = 44.1 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2 / +2
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ R + + E K + P + +V+CDVS +++A + ++ Y LDI
Sbjct: 119 FTKHGARVIIADIADETGKILAESLSPPATYVRCDVSKEQDVSAAVDLAMEKYAQLDIMF 298
Query: 500 NCAGIAN 520
N AGI +
Sbjct: 299 NNAGIVD 319
Score = 38.6 bits (78), Expect(2) = 2e-004
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP SS S +T P K+ PMP+APPV A +P
Sbjct: 183 ARILPVSSAMSAIMTLAPCFVKSRTMPSPMPDAPPVIIATLP 58
Score = 26.3 bits (51), Expect(2) = 2e-004
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2 / -3
Query: 531 TSVLLAIPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
T + IPA L ISS Y S A +LLTS T + G
Sbjct: 330 TLTVSTIPALLNMISSCAYFSMAKSTAALTSCSLLTSQRT*VAGG 196
>gb|CF387399.1|CF387399 RTDR1_12_D01.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_12_D01_A015 5', mRNA
sequence
Length = 711
Score = 44.6 bits (91), Expect = 9e-004
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TGGASGIG+ + F + G V + D ++E G+ +A
Sbjct: 107 GKVAIITGGASGIGEGIVRLFTKHGARVIIADIADETGKILA 232
Score = 44.1 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2 / +2
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ R + + E K + P + +V+CDVS +++A + ++ Y LDI
Sbjct: 167 FTKHGARVIIADIADETGKILAESLSPPATYVRCDVSKEQDVSAAVDLAMEKYAQLDIMF 346
Query: 500 NCAGIAN 520
N AGI +
Sbjct: 347 NNAGIVD 367
Score = 38.6 bits (78), Expect(2) = 2e-004
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP SS S +T P K+ PMP+APPV A +P
Sbjct: 231 ARILPVSSAMSAIMTLAPCFVKSRTMPSPMPDAPPVIIATLP 106
Score = 26.3 bits (51), Expect(2) = 2e-004
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2 / -1
Query: 531 TSVLLAIPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
T + IPA L ISS Y S A +LLTS T + G
Sbjct: 378 TLTVSTIPALLNMISSCAYFSMAKSTAALTSCSLLTSQRT*VAGG 244
>gb|CF395414.1|CF395414 RTDS2_11_D01.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_11_D01_A021 5', mRNA sequence
Length = 707
Score = 44.6 bits (91), Expect = 9e-004
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TGGASGIG+ + F + G V + D ++E G+ +A
Sbjct: 98 GKVAIITGGASGIGEGIVRLFTKHGARVIIADIADETGKILA 223
Score = 44.1 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2 / +2
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ R + + E K + P + +V+CDVS +++A + ++ Y LDI
Sbjct: 158 FTKHGARVIIADIADETGKILAESLSPPATYVRCDVSKEQDVSAAVDLAMEKYAQLDIMF 337
Query: 500 NCAGIAN 520
N AGI +
Sbjct: 338 NNAGIVD 358
Score = 38.6 bits (78), Expect(2) = 2e-004
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP SS S +T P K+ PMP+APPV A +P
Sbjct: 222 ARILPVSSAMSAIMTLAPCFVKSRTMPSPMPDAPPVIIATLP 97
Score = 26.3 bits (51), Expect(2) = 2e-004
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2 / -3
Query: 531 TSVLLAIPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
T + IPA L ISS Y S A +LLTS T + G
Sbjct: 369 TLTVSTIPALLNMISSCAYFSMAKSTAALTSCSLLTSQRT*VAGG 235
>gb|CF395842.1|CF395842 RTDS2_17_A02.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_17_A02_A021 5', mRNA sequence
Length = 706
Score = 44.6 bits (91), Expect = 9e-004
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TGGASGIG+ + F + G V + D ++E G+ +A
Sbjct: 100 GKVAIITGGASGIGEGIVRLFTKHGARVIIADIADETGKILA 225
Score = 44.1 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2 / +1
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ R + + E K + P + +V+CDVS +++A + ++ Y LDI
Sbjct: 160 FTKHGARVIIADIADETGKILAESLSPPATYVRCDVSKEQDVSAAVDLAMEKYAQLDIMF 339
Query: 500 NCAGIAN 520
N AGI +
Sbjct: 340 NNAGIVD 360
Score = 38.6 bits (78), Expect(2) = 2e-004
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP SS S +T P K+ PMP+APPV A +P
Sbjct: 224 ARILPVSSAMSAIMTLAPCFVKSRTMPSPMPDAPPVIIATLP 99
Score = 26.3 bits (51), Expect(2) = 2e-004
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2 / -3
Query: 531 TSVLLAIPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
T + IPA L ISS Y S A +LLTS T + G
Sbjct: 371 TLTVSTIPALLNMISSCAYFSMAKSTAALTSCSLLTSQRT*VAGG 237
>gb|CO158624.1|CO158624 FLD1_8_D01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_8_D01_A029 3', mRNA sequence
Length = 667
Score = 44.6 bits (91), Expect = 9e-004
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2 / -3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TGGASGIG+ + F + G V + D ++E G+ +A
Sbjct: 557 GKVAIITGGASGIGEGIVRLFTKHGARVIIADIADETGKILA 432
Score = 44.1 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2 / -3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ R + + E K + P + +V+CDVS +++A + ++ Y LDI
Sbjct: 497 FTKHGARVIIADIADETGKILAESLSPPATYVRCDVSKEQDVSAAVDLAMEKYAQLDIMF 318
Query: 500 NCAGIAN 520
N AGI +
Sbjct: 317 NNAGIVD 297
Score = 38.6 bits (78), Expect(2) = 2e-004
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / +1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP SS S +T P K+ PMP+APPV A +P
Sbjct: 433 ARILPVSSAMSAIMTLAPCFVKSRTMPSPMPDAPPVIIATLP 558
Score = 26.3 bits (51), Expect(2) = 2e-004
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2 / +1
Query: 531 TSVLLAIPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
T + IPA L ISS Y S A +LLTS T + G
Sbjct: 286 TLTVSTIPALLNMISSCAYFSMAKSTAALTSCSLLTSQRT*VAGG 420
>gb|CF402305.1|CF402305 RTWW1_19_D12.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_19_D12_A015 5', mRNA sequence
Length = 663
Score = 44.6 bits (91), Expect = 9e-004
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TGGASGIG+ + F + G V + D ++E G+ +A
Sbjct: 59 GKVAIITGGASGIGEGIVRLFTKHGARVIIADIADETGKILA 184
Score = 44.1 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2 / +2
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ R + + E K + P + +V+CDVS +++A + ++ Y LDI
Sbjct: 119 FTKHGARVIIADIADETGKILAESLSPPATYVRCDVSKEQDVSAAVDLAMEKYAQLDIMF 298
Query: 500 NCAGIAN 520
N AGI +
Sbjct: 299 NNAGIVD 319
Score = 38.6 bits (78), Expect(2) = 2e-004
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP SS S +T P K+ PMP+APPV A +P
Sbjct: 183 ARILPVSSAMSAIMTLAPCFVKSRTMPSPMPDAPPVIIATLP 58
Score = 26.3 bits (51), Expect(2) = 2e-004
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2 / -1
Query: 531 TSVLLAIPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
T + IPA L ISS Y S A +LLTS T + G
Sbjct: 330 TLTVSTIPALLNMISSCAYFSMAKSTAALTSCSLLTSQRT*VAGG 196
>gb|CO158614.1|CO158614 FLD1_8_C01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_8_C01_A029 3', mRNA sequence
Length = 589
Score = 44.6 bits (91), Expect = 9e-004
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2 / -3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TGGASGIG+ + F + G V + D ++E G+ +A
Sbjct: 494 GKVAIITGGASGIGEGIVRLFTKHGARVIIADIADETGKILA 369
Score = 44.1 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2 / -3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ R + + E K + P + +V+CDVS +++A + ++ Y LDI
Sbjct: 434 FTKHGARVIIADIADETGKILAESLSPPATYVRCDVSKEQDVSAAVDLAMEKYAQLDIMF 255
Query: 500 NCAGIAN 520
N AGI +
Sbjct: 254 NNAGIVD 234
Score = 38.6 bits (78), Expect(2) = 2e-004
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / +1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP SS S +T P K+ PMP+APPV A +P
Sbjct: 370 ARILPVSSAMSAIMTLAPCFVKSRTMPSPMPDAPPVIIATLP 495
Score = 26.3 bits (51), Expect(2) = 2e-004
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2 / +1
Query: 531 TSVLLAIPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
T + IPA L ISS Y S A +LLTS T + G
Sbjct: 223 TLTVSTIPALLNMISSCAYFSMAKSTAALTSCSLLTSQRT*VAGG 357
>gb|DR072729.1|DR072729 RTDK1_28_F01.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_28_F01_A029 3', mRNA sequence
Length = 588
Score = 44.6 bits (91), Expect = 9e-004
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2 / -1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TGGASGIG+ + F + G V + D ++E G+ +A
Sbjct: 486 GKVAIITGGASGIGEGIVRLFTKHGARVIIADIADETGKILA 361
Score = 44.1 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2 / -1
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ R + + E K + P + +V+CDVS +++A + ++ Y LDI
Sbjct: 426 FTKHGARVIIADIADETGKILAESLSPPATYVRCDVSKEQDVSAAVDLAMEKYAQLDIMF 247
Query: 500 NCAGIAN 520
N AGI +
Sbjct: 246 NNAGIVD 226
Score = 38.6 bits (78), Expect(2) = 2e-004
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / +2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP SS S +T P K+ PMP+APPV A +P
Sbjct: 362 ARILPVSSAMSAIMTLAPCFVKSRTMPSPMPDAPPVIIATLP 487
Score = 26.3 bits (51), Expect(2) = 2e-004
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2 / +2
Query: 531 TSVLLAIPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
T + IPA L ISS Y S A +LLTS T + G
Sbjct: 215 TLTVSTIPALLNMISSCAYFSMAKSTAALTSCSLLTSQRT*VAGG 349
>gb|BG039592.1|BG039592 NXSI_100_H02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_100_H02 5' similar to Arabidopsis thaliana
sequence At3g26770 short chain alcohol dehydrogenase
like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 429
Score = 46.9 bits (96), Expect = 2e-004
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = +2 / +3
Query: 203 GEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
G G A++TG A G+G+A+ F ++G V + D ++E+G+ +A + + H
Sbjct: 36 GSQRRLEGKVAIITGAAMGLGEAIARLFTKQGARVIIADIADESGKNLAESLSPPATYVH 215
Query: 383 GDLRIPSSIFVKCDVS 430
D+ I D++
Sbjct: 216 CDVSKEQDISAAVDLA 263
Score = 39.1 bits (79), Expect = 0.040
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2 / +3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F+++ R + + E+ K + P + +V CDVS +++A + ++ + LDI
Sbjct: 117 FTKQGARVIIADIADESGKNLAESLSPPATYVHCDVSKEQDISAAVDLAIELHGQLDIMF 296
Query: 500 NCAGIAN 520
N A A+
Sbjct: 297 NNAXTAD 317
>gb|CF386831.1|CF386831 RTDR1_9_D01.b1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_9_D01_A015 3', mRNA
sequence
Length = 626
Score = 46.9 bits (96), Expect = 2e-004
Identities = 23/85 (27%), Positives = 40/85 (47%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 505 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 326
Query: 404 SIFVKCDVSNADNLAACFEKHVQTY 478
I + + AA + + Y
Sbjct: 325 DISXSGGFGHGETRAARYNVQQRRY 251
Score = 39.1 bits (79), Expect = 0.040
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / +3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 381 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 506
>gb|CO363443.1|CO363443 RTK1_9_F08.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_9_F08_A029 5', mRNA sequence
Length = 835
Score = 46.9 bits (96), Expect = 2e-004
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +2 / +1
Query: 203 GEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
G+ G A++TGGASGIG+A+ F + G V + D +++ G +A + + H
Sbjct: 49 GQKRRLEGKVAIITGGASGIGEAIVRLFTKHGAKVIIADIADDAGGNLAESLSPLATYVH 228
Query: 383 GDLRIPSSIFVKCDVS 430
D+ I D++
Sbjct: 229 CDVSKEEDISTAVDLA 276
Score = 40.5 bits (82), Expect = 0.015
Identities = 21/87 (24%), Positives = 42/87 (48%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
P + +V CDVS ++++ + ++ LDI N AG ++ + +
Sbjct: 208 PLATYVHCDVSKEEDISTAVDLAMEKKGQLDIMYNNAGTVEFRVIESVAEYDMEQFDRVM 387
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
VN+ V+ G + A+++M +KK +I
Sbjct: 388 RVNVRGVMLGIKHAARVMIPRKKGCII 468
Score = 38.6 bits (78), Expect(2) = 0.019
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2 / -3
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISP 202
P SS S +T P K+ A PMP+APPV A +P P
Sbjct: 182 PASSAMSAIMTLAPCFVKSRTIASPMPDAPPVIIATLPSSRRFCP 48
Score = 21.7 bits (41), Expect(2) = 0.019
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2 / -3
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
+PA L ISS + S S+LLTS T + G
Sbjct: 323 VPALLYMISS*PFFSIAKSTAVLISSSLLTSQCT*VARG 207
>gb|CO364083.1|CO364083 RTK1_13_C10.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_13_C10_A029 5', mRNA sequence
Length = 786
Score = 46.9 bits (96), Expect = 2e-004
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +2 / +3
Query: 203 GEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
G+ G A++TGGASGIG+A+ F + G V + D +++ G +A + + H
Sbjct: 51 GQKRRLEGKVAIITGGASGIGEAIVRLFTKHGAKVIIADIADDAGGNLAESLSPLATYVH 230
Query: 383 GDLRIPSSIFVKCDVS 430
D+ I D++
Sbjct: 231 CDVSKEEDISTAVDLA 278
Score = 40.5 bits (82), Expect = 0.015
Identities = 21/87 (24%), Positives = 42/87 (48%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
P + +V CDVS ++++ + ++ LDI N AG ++ + +
Sbjct: 210 PLATYVHCDVSKEEDISTAVDLAMEKKGQLDIMYNNAGTVEFRVIESVAEYDMEQFDRVM 389
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
VN+ V+ G + A+++M +KK +I
Sbjct: 390 RVNVRGVMLGIKHAARVMIPRKKGCII 470
Score = 38.6 bits (78), Expect(2) = 0.018
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2 / -3
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISP 202
P SS S +T P K+ A PMP+APPV A +P P
Sbjct: 184 PASSAMSAIMTLAPCFVKSRTIASPMPDAPPVIIATLPSSRRFCP 50
Score = 21.7 bits (41), Expect(2) = 0.018
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2 / -3
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
+PA L ISS + S S+LLTS T + G
Sbjct: 325 VPALLYMISS*PFFSIAKSTAVLISSSLLTSQCT*VARG 209
>gb|DR057948.1|DR057948 RTNIT1_8_F07.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_8_F07_A029 5', mRNA sequence
Length = 872
Score = 46.9 bits (96), Expect = 2e-004
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +2 / +1
Query: 203 GEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
G+ G A++TGGASGIG+A+ F + G V + D +++ G +A + + H
Sbjct: 97 GQKRRLEGKVAIITGGASGIGEAIVRLFTKHGAKVIIADIADDAGGNLAESLSPLATYVH 276
Query: 383 GDLRIPSSIFVKCDVS 430
D+ I D++
Sbjct: 277 CDVSKEEDISTAVDLA 324
Score = 40.5 bits (82), Expect = 0.015
Identities = 21/87 (24%), Positives = 42/87 (48%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
P + +V CDVS ++++ + ++ LDI N AG ++ + +
Sbjct: 256 PLATYVHCDVSKEEDISTAVDLAMEKKGQLDIMYNNAGTVEFRVIESVAEYDMEQFDRVM 435
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
VN+ V+ G + A+++M +KK +I
Sbjct: 436 RVNVRGVMLGIKHAARVMIPRKKGCII 516
Score = 38.6 bits (78), Expect(2) = 0.020
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2 / -1
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISP 202
P SS S +T P K+ A PMP+APPV A +P P
Sbjct: 230 PASSAMSAIMTLAPCFVKSRTIASPMPDAPPVIIATLPSSRRFCP 96
Score = 21.7 bits (41), Expect(2) = 0.020
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2 / -1
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
+PA L ISS + S S+LLTS T + G
Sbjct: 371 VPALLYMISS*PFFSIAKSTAVLISSSLLTSQCT*VARG 255
>gb|DR110432.1|DR110432 RTS1_10_G10.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_10_G10_A029 5', mRNA sequence
Length = 812
Score = 35.4 bits (71), Expect(2) = 2e-004
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2 / +2
Query: 638 QKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
+K+ G +INI S GL YSAAK GV+ T++++
Sbjct: 425 KKRKGRVINIASVVGLTGNIGQANYSAAKAGVIGLTKTVA 544
Score = 31.8 bits (63), Expect(2) = 2e-004
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTV 313
A+VTG + GIGKA+ ++ R G V V
Sbjct: 56 AVVTGASRGIGKAIALSLGRAGCKVLV 136
>gb|DR387160.1|DR387160 RTHG1_19_H02.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_19_H02_A029 5', mRNA sequence
Length = 817
Score = 35.4 bits (71), Expect(2) = 2e-004
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2 / +2
Query: 638 QKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
+K+ G +INI S GL YSAAK GV+ T++++
Sbjct: 641 KKRKGRVINIASVVGLTGNIGQANYSAAKAGVIGLTKTVA 760
Score = 31.8 bits (63), Expect(2) = 2e-004
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTV 313
A+VTG + GIGKA+ ++ R G V V
Sbjct: 272 AVVTGASRGIGKAIALSLGRAGCKVLV 352
>gb|DR164431.1|DR164431 RTFE1_48_H05.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_48_H05_A029 5', mRNA sequence
Length = 852
Score = 35.4 bits (71), Expect(2) = 2e-004
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2 / +3
Query: 638 QKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
+K+ G +INI S GL YSAAK GV+ T++++
Sbjct: 642 KKRKGRVINIASVVGLTGNIGQANYSAAKAGVIGLTKTVA 761
Score = 31.8 bits (63), Expect(2) = 2e-004
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTV 313
A+VTG + GIGKA+ ++ R G V V
Sbjct: 273 AVVTGASRGIGKAIALSLGRAGCKVLV 353
>gb|CO366298.1|CO366298 RTK1_27_B10.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_27_B10_A029 3', mRNA sequence
Length = 868
Score = 35.4 bits (71), Expect(2) = 2e-004
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2 / -3
Query: 638 QKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
+K+ G +INI S GL YSAAK GV+ T++++
Sbjct: 203 KKRKGRVINIASVVGLTGNIGQANYSAAKAGVIGLTKTVA 84
Score = 31.8 bits (63), Expect(2) = 2e-004
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / -3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTV 313
A+VTG + GIGKA+ ++ R G V V
Sbjct: 572 AVVTGASRGIGKAIALSLGRAGCKVLV 492
>gb|CX646481.1|CX646481 COLD1_9_D05.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_9_D05_A029 5', mRNA sequence
Length = 876
Score = 35.4 bits (71), Expect(2) = 2e-004
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2 / +3
Query: 638 QKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
+K+ G +INI S GL YSAAK GV+ T++++
Sbjct: 672 KKRKGRVINIASVVGLTGNIGQANYSAAKAGVIGLTKTVA 791
Score = 31.8 bits (63), Expect(2) = 2e-004
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTV 313
A+VTG + GIGKA+ ++ R G V V
Sbjct: 303 AVVTGASRGIGKAIALSLGRAGCKVLV 383
>gb|DT638793.1|DT638793 EST1153724 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHJ54 3' end, mRNA sequence
Length = 874
Score = 35.4 bits (71), Expect(2) = 2e-004
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2 / +3
Query: 638 QKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
+K+ G +INI S GL YSAAK GV+ T++++
Sbjct: 660 KKRKGRVINIASVVGLTGNIGQANYSAAKAGVIGLTKTVA 779
Score = 31.8 bits (63), Expect(2) = 2e-004
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTV 313
A+VTG + GIGKA+ ++ R G V V
Sbjct: 291 AVVTGASRGIGKAIALSLGRAGCKVLV 371
>gb|CF402337.1|CF402337 RTWW1_19_G09.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_19_G09_A015 5', mRNA sequence
Length = 636
Score = 35.9 bits (72), Expect(2) = 2e-004
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQK 364
G LVTGGA+G + + FA +G V + D + + + +QK
Sbjct: 19 GRVVLVTGGAAGPSRDAALMFATKGANVVIGDIYQSGAQGIVDAIQK 159
Score = 28.6 bits (56), Expect(2) = 2e-004
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +2 / +1
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
+I+ +CDV+ ++ + FE ++ + G+DI I
Sbjct: 181 AIWKRCDVTIWEDQVSLFESAMKAFGGIDIVI 276
>gb|BF608989.1|BF608989 NXSI_039_B05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_039_B05 5' similar to Arabidopsis thaliana
sequence At2g47140 alcohol dehydrogenase like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 321
Score = 46.4 bits (95), Expect = 2e-004
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A++TGGA GIG+A+ F + G V + D ++E G ++A + + H D+
Sbjct: 47 GKVAIITGGAMGIGEAIVRLFTKHGAKVIIADIADEVGSKLADSLSPRATYVHCDVSKEE 226
Query: 404 SIFVKCDVS 430
+ D++
Sbjct: 227 EVSAAVDLA 253
Score = 39.1 bits (79), Expect = 0.040
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ LP SS S +T P K+ A PMP APPV A +P
Sbjct: 171 ASLLPTSSAMSAIMTLAPCFVKSRTMASPMPIAPPVIIATLP 46
Score = 31.8 bits (63), Expect = 6.4
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2 / +2
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ + + + E D P + +V CDVS + ++A + ++ + LDI
Sbjct: 107 FTKHGAKVIIADIADEVGSKLADSLSPRATYVHCDVSKEEEVSAAVDLAMEKHGQLDIMY 286
Query: 500 NCA 508
N A
Sbjct: 287 NNA 295
>gb|CF401287.1|CF401287 RTWW1_11_E07.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_11_E07_A015 5', mRNA sequence
Length = 610
Score = 46.4 bits (95), Expect = 2e-004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 123 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDVSKEE 302
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 303 DISTVVDLA 329
Score = 39.1 bits (79), Expect = 0.040
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A +P
Sbjct: 247 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATLP 122
Score = 38.6 bits (78), Expect = 0.054
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLV 532
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV
Sbjct: 261 PSATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGINDAVLV 395
>gb|CV032541.1|CV032541 RTNACL1_8_G10.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_8_G10_A029 5', mRNA sequence
Length = 811
Score = 46.4 bits (95), Expect = 2e-004
Identities = 26/98 (26%), Positives = 48/98 (48%)
Frame = +2 / +2
Query: 365 ENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDT 544
E K + P + +V CDVS ++++ + ++ Y LDI N AGI + L
Sbjct: 41 EAGKILAESLSPPATYVHCDVSKEHDISSVVDLAMEKYGQLDIMYNNAGINDALLFQKVE 220
Query: 545 SDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVI 658
+ ++VN+ V+ G + A+++M +KK +I
Sbjct: 221 EYDMEQYDKVMSVNVRGVMLGIKHAARVMIPRKKGCII 334
>gb|CF387208.1|CF387208 RTDR1_11_A03.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_11_A03_A015 5', mRNA
sequence
Length = 762
Score = 44.1 bits (90), Expect(2) = 3e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 14 GKVAVITGGASGIGEASAKLFVENGAQVVIADIQDDLGNCLAKSLSPNACYFHCDV 181
Score = 35.0 bits (70), Expect = 0.69
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2 / -1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++A P SS S T P + A PMP APPV +A +P
Sbjct: 144 DLAKQFPRSS*MSAITTCAPFSTNNLALASPMPLAPPVITATLP 13
Score = 32.2 bits (64), Expect = 4.6
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2 / +2
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F E + V +Q + P++ + CDVS +++A + V+ + LDI
Sbjct: 74 FVENGAQVVIADIQDDLGNCLAKSLSPNACYFHCDVSKETDVSALVDYAVEKHGHLDIMF 253
Query: 500 NCAGI 514
+ AGI
Sbjct: 254 SNAGI 268
Score = 22.1 bits (42), Expect(2) = 3e-004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 515 LAQHGIRVNCVSP 553
>gb|DT636699.1|DT636699 EST1151630 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGU80 3' end, mRNA sequence
Length = 836
Score = 46.0 bits (94), Expect = 3e-004
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A++TGGA+GIG + F + G V + D ++E G+ +A + + H D+
Sbjct: 99 GKVAIITGGAAGIGDGIVRLFTKHGAKVIIADIADEAGKNLAESLSPPATYVHCDVTKEE 278
Query: 404 SIFVKCDVS 430
I D++
Sbjct: 279 DISTAVDLA 305
Score = 36.3 bits (73), Expect = 0.27
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP SS S +T P K+ PMP APPV A +P
Sbjct: 223 AKFLPASSAMSAIMTLAPCFVKSRTIPSPMPAAPPVIIATLP 98
Score = 33.1 bits (66), Expect = 2.5
Identities = 14/64 (21%), Positives = 31/64 (48%)
Frame = +2 / +3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ + + + E K + P + +V CDV+ ++++ + ++ + LDI
Sbjct: 159 FTKHGAKVIIADIADEAGKNLAESLSPPATYVHCDVTKEEDISTAVDLAMEKHGQLDIMY 338
Query: 500 NCAG 511
N AG
Sbjct: 339 NNAG 350
>gb|CF664416.1|CF664416 RTCNT1_9_D05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_9_D05_A029 5', mRNA sequence
Length = 588
Score = 43.7 bits (89), Expect(2) = 3e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 14 GKVAVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 181
Score = 36.8 bits (74), Expect = 0.19
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2 / -1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++A P SS S T P + A PMP APPV +A +P
Sbjct: 144 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITATLP 13
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 152 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 268
Score = 22.1 bits (42), Expect(2) = 3e-004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 517 LAQHGIRVNCVSP 555
>gb|DR053823.1|DR053823 RTCA1_13_C03.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_13_C03_A029 5', mRNA sequence
Length = 619
Score = 43.7 bits (89), Expect(2) = 4e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 42 GKVAVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 209
Score = 38.2 bits (77), Expect = 0.075
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2 / -1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPA 199
++A P SS S T P + A PMP APPV +A +P +S A
Sbjct: 172 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITATLPSSLILSTA 17
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 180 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 296
Score = 22.1 bits (42), Expect(2) = 4e-004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 543 LAQHGIRVNCVSP 581
>gb|DR163899.1|DR163899 RTFE1_45_D04.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_45_D04_A029 5', mRNA sequence
Length = 852
Score = 44.1 bits (90), Expect(2) = 4e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 17 GKVAVITGGASGIGEASAKLFVENGAQVVIADIQDDLGNCLAKSLSPNACYFHCDV 184
Score = 35.0 bits (70), Expect = 0.69
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2 / -1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++A P SS S T P + A PMP APPV +A +P
Sbjct: 147 DLAKQFPRSS*MSAITTCAPFSTNNLALASPMPLAPPVITATLP 16
Score = 32.2 bits (64), Expect = 4.6
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2 / +2
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F E + V +Q + P++ + CDVS +++A + V+ + LDI
Sbjct: 77 FVENGAQVVIADIQDDLGNCLAKSLSPNACYFHCDVSKETDVSALVDYAVEKHGHLDIMF 256
Query: 500 NCAGI 514
+ AGI
Sbjct: 257 SNAGI 271
Score = 22.1 bits (42), Expect(2) = 4e-004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 518 LAQHGIRVNCVSP 556
>gb|CF387216.1|CF387216 RTDR1_11_G01.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_11_G01_A015 5', mRNA
sequence
Length = 628
Score = 43.7 bits (89), Expect(2) = 4e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 15 GKVAVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 182
Score = 36.8 bits (74), Expect = 0.19
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2 / -1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++A P SS S T P + A PMP APPV +A +P
Sbjct: 145 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITATLP 14
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 153 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 269
Score = 22.1 bits (42), Expect(2) = 4e-004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 516 LAQHGIRVNCVSP 554
>gb|DR743685.1|DR743685 RTCU1_17_C02.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_17_C02_A029 5', mRNA sequence
Length = 900
Score = 44.1 bits (90), Expect(2) = 4e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 8 GQVAVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 175
Score = 35.4 bits (71), Expect = 0.50
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2 / -1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++A P SS S T P + A PMP APPV +A P
Sbjct: 138 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITATCP 7
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 146 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 262
Score = 22.1 bits (42), Expect(2) = 4e-004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 509 LAQHGIRVNCVSP 547
>gb|CV036263.1|CV036263 RTNACL1_57_H11.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_57_H11_A029 5', mRNA sequence
Length = 708
Score = 43.7 bits (89), Expect(2) = 4e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 13 GKVAVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 180
Score = 36.3 bits (73), Expect = 0.27
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = -2 / -2
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLS 214
++A P SS S T P + A PMP APPV +A P S
Sbjct: 143 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITATFPPAS 3
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 151 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 267
Score = 22.1 bits (42), Expect(2) = 4e-004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 514 LAQHGIRVNCVSP 552
>gb|CF388365.1|CF388365 RTDR2_2_H08.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_2_H08_A021 5', mRNA
sequence
Length = 735
Score = 43.7 bits (89), Expect(2) = 4e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 35 GKVAVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 202
Score = 38.2 bits (77), Expect = 0.075
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2 / -1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPA 199
++A P SS S T P + A PMP APPV +A +P +S A
Sbjct: 165 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITATLPSSLILSTA 10
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 173 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 289
Score = 22.1 bits (42), Expect(2) = 4e-004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 536 LAQHGIRVNCVSP 574
>gb|DR742204.1|DR742204 RTCU1_2_B03.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_2_B03_A029 5', mRNA sequence
Length = 748
Score = 43.7 bits (89), Expect(2) = 4e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 9 GKVAVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 176
Score = 36.8 bits (74), Expect = 0.19
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2 / -1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++A P SS S T P + A PMP APPV +A +P
Sbjct: 139 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITATLP 8
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 147 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 263
Score = 22.1 bits (42), Expect(2) = 4e-004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 510 LAQHGIRVNCVSP 548
>gb|CF387199.1|CF387199 RTDR1_11_F05.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_11_F05_A015 5', mRNA
sequence
Length = 761
Score = 43.7 bits (89), Expect(2) = 4e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 45 GKVAVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 212
Score = 38.6 bits (78), Expect = 0.054
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -2 / -2
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPAQ 196
++A P SS S T P + A PMP APPV +A +P +S A+
Sbjct: 175 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITATLPSSLILSTAR 17
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 183 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 299
Score = 22.1 bits (42), Expect(2) = 4e-004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 546 LAQHGIRVNCVSP 584
>gb|DR089483.1|DR089483 RTAL1_9_B01.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_9_B01_A029 3', mRNA sequence
Length = 764
Score = 43.7 bits (89), Expect(2) = 4e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2 / -1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 722 GKVAVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 555
Score = 38.2 bits (77), Expect = 0.075
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2 / +1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPA 199
++A P SS S T P + A PMP APPV +A +P +S A
Sbjct: 592 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITATLPSSLILSTA 747
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / -1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 584 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 468
Score = 22.1 bits (42), Expect(2) = 4e-004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / -1
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 221 LAQHGIRVNCVSP 183
>gb|DN456289.1|DN456289 EST952088 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGN42 5' end, mRNA sequence
Length = 775
Score = 33.6 bits (67), Expect(2) = 5e-004
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G L+TG +SGIG+ + +A+RG + VV EVA
Sbjct: 184 GKVVLITGASSGIGQHMAWEYAKRGANLVVVARRRNRLEEVA 309
Score = 32.2 bits (64), Expect(2) = 5e-004
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2 / +1
Query: 638 QKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSL 754
Q++ G I+ I S P VYSAAKG ++ F +L
Sbjct: 562 QRRRGQIVVISSMIAFLPFPFTTVYSAAKGALLNFFETL 678
>gb|CF479617.1|CF479617 RTWW3_11_C12.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_11_C12_A022 3', mRNA sequence
Length = 564
Score = 45.5 bits (93), Expect = 5e-004
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2 / -3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A+VTGGA GIG+A+ F + G V + D +++ G+ +A + + H D+
Sbjct: 376 GKVAIVTGGAMGIGEAIVRLFTKHGAKVIIADLADKAGKSLAEQLSPSATYVHCDV 209
Score = 45.1 bits (92), Expect = 6e-004
Identities = 22/78 (28%), Positives = 42/78 (53%)
Frame = +2 / -3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
PS+ +V CDVS ++++ + ++ + LDI N AGI + LV + +
Sbjct: 238 PSATYVHCDVSKEEDISTVVDFAMEKHGQLDIMYNNAGINDAVLVKSVAEYDMVEYDRVM 59
Query: 578 NVNLVAVIDGTRIASQIM 631
+VN+ V+ G + A+++M
Sbjct: 58 SVNVRGVMLGIKHAARVM 5
Score = 38.2 bits (77), Expect(2) = 0.013
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / +3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S KS +T P K+ A P+P APPVT A P
Sbjct: 252 ARLLPALSAKSAIMTLAPCFVKSRTMASPIPIAPPVTIATFP 377
Score = 22.1 bits (42), Expect(2) = 0.013
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2 / +3
Query: 618 AMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISS 484
A +PS+T FTL + + + T IPA L ISS
Sbjct: 18 ACLMPSITPLTFTLITRSYSTMSYSATLFTRTASLIPALLYIISS 152
>gb|DR182052.1|DR182052 RTMNUT1_42_D02.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_42_D02_A029 5', mRNA sequence
Length = 854
Score = 43.7 bits (89), Expect(2) = 5e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 11 GKVAVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 178
Score = 36.8 bits (74), Expect = 0.19
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2 / -3
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++A P SS S T P + A PMP APPV +A +P
Sbjct: 141 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITATLP 10
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 149 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 265
Score = 22.1 bits (42), Expect(2) = 5e-004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 512 LAQHGIRVNCVSP 550
>gb|DT626447.1|DT626447 EST1158371 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAA90 5' end, mRNA sequence
Length = 896
Score = 33.6 bits (67), Expect(2) = 5e-004
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G L+TG +SGIG+ + +A+RG + VV EVA
Sbjct: 174 GKVVLITGASSGIGQHMAWEYAKRGANLVVVARRRNRLEEVA 299
Score = 32.2 bits (64), Expect(2) = 5e-004
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2 / +3
Query: 638 QKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSL 754
Q++ G I+ I S P VYSAAKG ++ F +L
Sbjct: 552 QRRRGQIVVISSMIAFLPFPFTTVYSAAKGALLNFFETL 668
>gb|DN464830.1|DN464830 EST960629 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJH26 5' end, mRNA sequence
Length = 909
Score = 33.6 bits (67), Expect(2) = 5e-004
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G L+TG +SGIG+ + +A+RG + VV EVA
Sbjct: 180 GKVVLITGASSGIGQHMAWEYAKRGANLVVVARRRNRLEEVA 305
Score = 32.2 bits (64), Expect(2) = 5e-004
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2 / +3
Query: 638 QKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSL 754
Q++ G I+ I S P VYSAAKG ++ F +L
Sbjct: 558 QRRRGQIVVISSMIAFLPFPFTTVYSAAKGALLNFFETL 674
>gb|CV136936.1|CV136936 EST848145 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAI19 5' end, mRNA sequence
Length = 916
Score = 33.6 bits (67), Expect(2) = 5e-004
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G L+TG +SGIG+ + +A+RG + VV EVA
Sbjct: 176 GKVVLITGASSGIGQHMAWEYAKRGANLVVVARRRNRLEEVA 301
Score = 32.2 bits (64), Expect(2) = 5e-004
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2 / +2
Query: 638 QKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSL 754
Q++ G I+ I S P VYSAAKG ++ F +L
Sbjct: 554 QRRRGQIVVISSMIAFLPFPFTTVYSAAKGALLNFFETL 670
>gb|DN460915.1|DN460915 EST956714 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPII408 5' end, mRNA sequence
Length = 940
Score = 33.6 bits (67), Expect(2) = 6e-004
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G L+TG +SGIG+ + +A+RG + VV EVA
Sbjct: 167 GKVVLITGASSGIGQHMAWEYAKRGANLVVVARRRNRLEEVA 292
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2 / +2
Query: 638 QKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSL 754
Q++ G I+ I S P VYSAAKG ++ F +L
Sbjct: 545 QRRRGQIVVISSMIAFLPFPFTTVYSAAKGALLNFFETL 661
>gb|DT627111.1|DT627111 EST1160187 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAV02 5' end, mRNA sequence
Length = 977
Score = 33.6 bits (67), Expect(2) = 6e-004
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G L+TG +SGIG+ + +A+RG + VV EVA
Sbjct: 165 GKVVLITGASSGIGQHMAWEYAKRGANLVVVARRRNRLEEVA 290
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2 / +3
Query: 638 QKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSL 754
Q++ G I+ I S P VYSAAKG ++ F +L
Sbjct: 543 QRRRGQIVVISSMIAFLPFPFTTVYSAAKGALLNFFETL 659
>gb|CO365814.1|CO365814 RTK1_19_H09.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_19_H09_A029 3', mRNA sequence
Length = 729
Score = 43.2 bits (88), Expect(2) = 6e-004
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+ F G V + D ++ G +A + FH D+
Sbjct: 716 GKVAVITGGASGIGEESAKLFVENGAQVVIADIQDDFGNRLAKSLAPNACYFHCDV 549
Score = 31.3 bits (62), Expect = 8.8
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2 / +1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++A P SS S T P + + P+P APPV +A +P
Sbjct: 586 DLAKRFPKSS*MSAITTCAPFSTNNLALSSPIPLAPPVITATLP 717
Score = 22.1 bits (42), Expect(2) = 6e-004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / -2
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 215 LAQHGIRVNCVSP 177
>gb|DR744138.1|DR744138 RTCU1_20_A08.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_20_A08_A029 5', mRNA sequence
Length = 771
Score = 36.3 bits (73), Expect(2) = 6e-004
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENG 337
G +ALVTGG GIG A +A A G V +V +G
Sbjct: 44 GKNALVTGGTRGIGAACALALAEAGANVCLVQREPTDG 157
Score = 33.1 bits (66), Expect = 2.5
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2 / -1
Query: 315 TTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSS 211
T T P A+A A P+P PPVTSA +P S+
Sbjct: 135 TRHTLAPASARARAHAAPIPRVPPVTSAFLPERSN 31
Score = 29.0 bits (57), Expect(2) = 6e-004
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2 / +2
Query: 644 KPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
+ G I+N S P Y+AAKG + T+SLS
Sbjct: 440 REGKIVNFCSLMSYQGGLTIPAYAAAKGALGQLTKSLS 553
>gb|DR053427.1|DR053427 RTCA1_11_B12.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_11_B12_A029 3', mRNA sequence
Length = 786
Score = 36.3 bits (73), Expect(2) = 6e-004
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENG 337
G +ALVTGG GIG A +A A G V +V +G
Sbjct: 725 GKNALVTGGTRGIGAACALALAEAGANVCLVQREPTDG 612
Score = 35.0 bits (70), Expect = 0.69
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -2 / +1
Query: 315 TTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSS 211
T T P A+A A PMP PPVTSA +P S+
Sbjct: 634 TRHTLAPASARARAHAAPMPRVPPVTSAFLPERSN 738
Score = 29.0 bits (57), Expect(2) = 6e-004
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2 / -2
Query: 644 KPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
+ G I+N S P Y+AAKG + T+SLS
Sbjct: 329 REGKIVNFCSLMSYQGGLTIPAYAAAKGALGQLTKSLS 216
>gb|CO409072.1|CO409072 EST839457 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAKL01 5' end, mRNA sequence
Length = 939
Score = 45.1 bits (92), Expect = 6e-004
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G AL+TG ASGIG+A F + G V + D +E G E A + + H D+
Sbjct: 175 GKVALITGAASGIGRASAEEFIKNGAKVMIADIQDELGMEAARELGPNSDFIHCDV 342
Score = 36.8 bits (74), Expect = 0.19
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / -2
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+++A S+P SS S +T P + A PMP A PV A +P
Sbjct: 308 SSLAASMPNSSWMSAIITLAPFFMNSSAEARPMPLAAPVIKATLP 174
Score = 33.6 bits (67), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTL 529
P+S F+ CDV+ + + + + + LDI N AGI L
Sbjct: 313 PNSDFIHCDVTQEEQVEEAVNQTISKHGQLDIMYNNAGIPGPLL 444
>gb|CO409603.1|CO409603 EST839988 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAKS12 5' end, mRNA sequence
Length = 832
Score = 45.1 bits (92), Expect = 6e-004
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G AL+TG ASGIG+A F + G V + D +E G E A + + H D+
Sbjct: 142 GKVALITGAASGIGRASAEEFIKNGAKVMIADIQDELGMEAARELGPNSDFIHCDV 309
Score = 36.8 bits (74), Expect = 0.19
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / -3
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+++A S+P SS S +T P + A PMP A PV A +P
Sbjct: 275 SSLAASMPNSSWMSAIITLAPFFMNSSAEARPMPLAAPVIKATLP 141
Score = 33.6 bits (67), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTL 529
P+S F+ CDV+ + + + + + LDI N AGI L
Sbjct: 280 PNSDFIHCDVTQEEQVEEAVNQTISKHGQLDIMYNNAGIPGPLL 411
>gb|CO413999.1|CO413999 EST844384 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMI36 5' end, mRNA sequence
Length = 954
Score = 45.1 bits (92), Expect = 6e-004
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G AL+TG ASGIG+A F + G V + D +E G E A + + H D+
Sbjct: 142 GKVALITGAASGIGRASAEEFIKNGAKVMIADIQDELGMEAARELGPNSDFIHCDV 309
Score = 36.8 bits (74), Expect = 0.19
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / -2
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+++A S+P SS S +T P + A PMP A PV A +P
Sbjct: 275 SSLAASMPNSSWMSAIITLAPFFMNSSAEARPMPLAAPVIKATLP 141
Score = 33.6 bits (67), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTL 529
P+S F+ CDV+ + + + + + LDI N AGI L
Sbjct: 280 PNSDFIHCDVTQEEQVEEAVNQTISKHGQLDIMYNNAGIPGPLL 411
>gb|CO414116.1|CO414116 EST844501 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMJ95 5' end, mRNA sequence
Length = 635
Score = 45.1 bits (92), Expect = 6e-004
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G AL+TG ASGIG+A F + G V + D +E G E A + + H D+
Sbjct: 175 GKVALITGAASGIGRASAEEFIKNGAKVMIADIQDELGMEAARELGPNSDFIHCDV 342
Score = 36.8 bits (74), Expect = 0.19
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / -1
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+++A S+P SS S +T P + A PMP A PV A +P
Sbjct: 308 SSLAASMPNSSWMSAIITLAPFFMNSSAEARPMPLAAPVIKATLP 174
Score = 32.7 bits (65), Expect = 3.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTL 529
P+S F+ CDV+ + + + + LDI N AGI L
Sbjct: 313 PNSDFIHCDVTQEEQVEEAVNHTISKHGQLDIMYNNAGIPGPLL 444
>gb|DN446164.1|DN446164 EST941963 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBE63 5' end, mRNA sequence
Length = 943
Score = 45.1 bits (92), Expect = 6e-004
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G AL+TG ASGIG+A F + G V + D +E G E A + + H D+
Sbjct: 175 GKVALITGAASGIGRASAEEFIKNGAKVMIADIQDELGMEAARELGPNSDFIHCDV 342
Score = 36.8 bits (74), Expect = 0.19
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / -3
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+++A S+P SS S +T P + A PMP A PV A +P
Sbjct: 308 SSLAASMPNSSWMSAIITLAPFFMNSSAEARPMPLAAPVIKATLP 174
Score = 33.6 bits (67), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTL 529
P+S F+ CDV+ + + + + + LDI N AGI L
Sbjct: 313 PNSDFIHCDVTQEEQVEEAVNQTISKHGQLDIMYNNAGIPGPLL 444
>gb|DN447561.1|DN447561 EST943360 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBU34 5' end, mRNA sequence
Length = 953
Score = 45.1 bits (92), Expect = 6e-004
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G AL+TG ASGIG+A F + G V + D +E G E A + + H D+
Sbjct: 142 GKVALITGAASGIGRASAEEFIKNGAKVMIADIQDELGMEAARELGPNSDFIHCDV 309
Score = 36.8 bits (74), Expect = 0.19
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / -1
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+++A S+P SS S +T P + A PMP A PV A +P
Sbjct: 275 SSLAASMPNSSWMSAIITLAPFFMNSSAEARPMPLAAPVIKATLP 141
Score = 33.6 bits (67), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTL 529
P+S F+ CDV+ + + + + + LDI N AGI L
Sbjct: 280 PNSDFIHCDVTQEEQVEEAVNQTISKHGQLDIMYNNAGIPGPLL 411
>gb|DN447717.1|DN447717 EST943516 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBW35 5' end, mRNA sequence
Length = 892
Score = 45.1 bits (92), Expect = 6e-004
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G AL+TG ASGIG+A F + G V + D +E G E A + + H D+
Sbjct: 179 GKVALITGAASGIGRASAEEFIKNGAKVMIADIQDELGMEAARELGPNSDFIHCDV 346
Score = 36.8 bits (74), Expect = 0.19
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / -2
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+++A S+P SS S +T P + A PMP A PV A +P
Sbjct: 312 SSLAASMPNSSWMSAIITLAPFFMNSSAEARPMPLAAPVIKATLP 178
Score = 33.6 bits (67), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTL 529
P+S F+ CDV+ + + + + + LDI N AGI L
Sbjct: 317 PNSDFIHCDVTQEEQVEEAVNQTISKHGQLDIMYNNAGIPGPLL 448
>gb|DT625981.1|DT625981 EST1157905 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA578 5' end, mRNA sequence
Length = 960
Score = 45.1 bits (92), Expect = 6e-004
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G AL+TG ASGIG+A F + G V + D +E G E A + + H D+
Sbjct: 104 GKVALITGAASGIGRASAEEFIKNGAKVMIADIQDELGMEAARELGPNSDFIHCDV 271
Score = 36.8 bits (74), Expect = 0.19
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / -1
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+++A S+P SS S +T P + A PMP A PV A +P
Sbjct: 237 SSLAASMPNSSWMSAIITLAPFFMNSSAEARPMPLAAPVIKATLP 103
Score = 33.6 bits (67), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTL 529
P+S F+ CDV+ + + + + + LDI N AGI L
Sbjct: 242 PNSDFIHCDVTQEEQVEEAVNQTISKHGQLDIMYNNAGIPGPLL 373
>gb|DT624502.1|DT624502 EST1158789 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAF44 5' end, mRNA sequence
Length = 881
Score = 45.1 bits (92), Expect = 6e-004
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G AL+TG ASGIG+A F + G V + D +E G E A + + H D+
Sbjct: 142 GKVALITGAASGIGRASAEEFIKNGAKVMIADIQDELGMEAARELGPNSDFIHCDV 309
Score = 36.8 bits (74), Expect = 0.19
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / -1
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+++A S+P SS S +T P + A PMP A PV A +P
Sbjct: 275 SSLAASMPNSSWMSAIITLAPFFMNSSAEARPMPLAAPVIKATLP 141
Score = 33.6 bits (67), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTL 529
P+S F+ CDV+ + + + + + LDI N AGI L
Sbjct: 280 PNSDFIHCDVTQEEQVEEAVNQTISKHGQLDIMYNNAGIPGPLL 411
>gb|DR167567.1|DR167567 RTPHOS1_19_D07.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_19_D07_A029 5', mRNA sequence
Length = 797
Score = 38.2 bits (77), Expect(2) = 8e-004
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2 / +1
Query: 230 SALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
SA++TG SGIG + FA G V +VD + + VA L+
Sbjct: 49 SAIITGAGSGIGLETSLLFASEGANVLLVDVNVKAAESVAALI 177
Score = 24.4 bits (47), Expect(2) = 8e-004
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2 / +1
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+I VK DV + + V+ + LDI N AGI
Sbjct: 202 AIAVKTDVGVEKEIKDAVDLAVKEFGRLDIMFNNAGI 312
>gb|DR058916.1|DR058916 RTNIT1_14_D09.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_14_D09_A029 5', mRNA sequence
Length = 568
Score = 42.3 bits (86), Expect(2) = 8e-004
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 14 AVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 172
Score = 33.1 bits (66), Expect = 2.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2 / -2
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSA 232
++A P SS S T P + A PMP APPV +A
Sbjct: 135 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITA 13
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 143 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 259
Score = 22.1 bits (42), Expect(2) = 8e-004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 506 LAQHGIRVNCVSP 544
>gb|CO170645.1|CO170645 NDL1_15_G04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_15_G04_A029 5', mRNA sequence
Length = 762
Score = 44.6 bits (91), Expect = 9e-004
Identities = 22/87 (25%), Positives = 43/87 (49%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
P++ F+ CDVS ++++A + ++ + LDI N AG V + +
Sbjct: 48 PAATFLHCDVSKEEDMSAAVDLAIEKHGQLDIMFNNAGTIEIVAVGSVAEYEVEQFDRVM 227
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
VN+ + G + A+++M +KK +I
Sbjct: 228 RVNVRGTMLGIKHAARVMIPRKKGTII 308
>gb|CO172267.1|CO172267 NDL1_28_C10.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_28_C10_A029 5', mRNA sequence
Length = 782
Score = 44.6 bits (91), Expect = 9e-004
Identities = 22/87 (25%), Positives = 43/87 (49%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
P++ F+ CDVS ++++A + ++ + LDI N AG V + +
Sbjct: 50 PAATFLHCDVSKEEDMSAAVDLAIEKHGQLDIMFNNAGTIEIVAVGSVAEYEVEQFDRVM 229
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
VN+ + G + A+++M +KK +I
Sbjct: 230 RVNVRGTMLGIKHAARVMIPRKKGTII 310
>gb|CX652138.1|CX652138 COLD1_57_E02.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_57_E02_A029 3', mRNA sequence
Length = 750
Score = 44.6 bits (91), Expect = 9e-004
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +2 / +3
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAVNVNL 589
+V CDVS +++A + ++ + LDI N AG A V + ++VN+
Sbjct: 9 YVHCDVSKEQDISAAVDLAIELHGQLDIMFNNAGTAESGSVKSVAEYEMEQYDRVMSVNV 188
Query: 590 VAVIDGTRIASQIMRNQKKPGVI 658
V+ G + A+++M +KK +I
Sbjct: 189 RGVMLGIKHAARVMIPRKKGCII 257
>gb|CF402750.1|CF402750 RTWW1_22_H01.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_22_H01_A015 5', mRNA sequence
Length = 626
Score = 42.3 bits (86), Expect(2) = 0.001
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G +++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 13 GKVSVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 180
Score = 34.5 bits (69), Expect = 0.95
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -2 / -1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++A P SS S T P + A PMP APPV + +P
Sbjct: 143 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITETLP 12
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 151 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 267
Score = 22.1 bits (42), Expect(2) = 0.001
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 514 LAQHGIRVNCVSP 552
>gb|DR179233.1|DR179233 RTMNUT1_16_G08.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_16_G08_A029 5', mRNA sequence
Length = 671
Score = 42.3 bits (86), Expect(2) = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 3 AVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 161
Score = 33.1 bits (66), Expect = 2.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2 / -2
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSA 232
++A P SS S T P + A PMP APPV +A
Sbjct: 124 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITA 2
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 132 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 248
Score = 22.1 bits (42), Expect(2) = 0.001
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 495 LAQHGIRVNCVSP 533
>gb|CF387738.1|CF387738 RTDR1_19_B05.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_19_B05_A015 5', mRNA
sequence
Length = 716
Score = 42.3 bits (86), Expect(2) = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 9 AVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 167
Score = 33.6 bits (67), Expect = 1.8
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2 / -2
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
++A P SS S T P + A PMP APPV +A +
Sbjct: 130 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITATL 2
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 138 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 254
Score = 22.1 bits (42), Expect(2) = 0.001
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 501 LAQHGIRVNCVSP 539
>gb|CV138710.1|CV138710 EST849919 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIB637 5' end, mRNA sequence
Length = 866
Score = 32.2 bits (64), Expect(2) = 0.001
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2 / +3
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+I K DV+ +A F+ QT+ L I +N AG+A+
Sbjct: 183 AIVCKADVAEPSQVAHLFDMAEQTFGTLHIVVNNAGVAD 299
Score = 29.9 bits (59), Expect(2) = 0.001
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A+VTG + GIG+ + + A +G V V
Sbjct: 12 GRVAIVTGASRGIGREIALHLAEKGAKVVV 101
>gb|DN447649.1|DN447649 EST943448 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBV40 5' end, mRNA sequence
Length = 836
Score = 32.2 bits (64), Expect(2) = 0.001
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2 / +2
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+I K DV+ +A F+ QT+ L I +N AG+A+
Sbjct: 287 AIVCKADVAEPSQVAHLFDMAEQTFGTLHIVVNNAGVAD 403
Score = 29.9 bits (59), Expect(2) = 0.001
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A+VTG + GIG+ + + A +G V V
Sbjct: 116 GRVAIVTGASRGIGREIALHLAEKGAKVVV 205
>gb|CO413464.1|CO413464 EST843849 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMB28 5' end, mRNA sequence
Length = 825
Score = 32.2 bits (64), Expect(2) = 0.001
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2 / +2
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+I K DV+ +A F+ QT+ L I +N AG+A+
Sbjct: 287 AIVCKADVAEPSQVAHLFDMAEQTFGTLHIVVNNAGVAD 403
Score = 29.9 bits (59), Expect(2) = 0.001
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A+VTG + GIG+ + + A +G V V
Sbjct: 116 GRVAIVTGASRGIGREIALHLAEKGAKVVV 205
>gb|CO411223.1|CO411223 EST841608 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALH41 5' end, mRNA sequence
Length = 811
Score = 32.2 bits (64), Expect(2) = 0.001
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2 / +2
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+I K DV+ +A F+ QT+ L I +N AG+A+
Sbjct: 287 AIVCKADVAEPSQVAHLFDMAEQTFGTLHIVVNNAGVAD 403
Score = 29.9 bits (59), Expect(2) = 0.001
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A+VTG + GIG+ + + A +G V V
Sbjct: 116 GRVAIVTGASRGIGREIALHLAEKGAKVVV 205
>gb|CX650706.1|CX650706 COLD1_47_C05.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_47_C05_A029 5', mRNA sequence
Length = 742
Score = 32.2 bits (64), Expect(2) = 0.001
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2 / +2
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+I K DV+ +A F+ QT+ L I +N AG+A+
Sbjct: 176 AIVCKADVAEPSQVAHLFDTAEQTFGTLHIVVNNAGVAD 292
Score = 29.9 bits (59), Expect(2) = 0.001
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A+VTG + GIG+ + + A +G V V
Sbjct: 5 GRVAIVTGASRGIGREIALHLAEKGAKVVV 94
>gb|CF396532.1|CF396532 RTDS2_22_G01.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_22_G01_A021 5', mRNA sequence
Length = 530
Score = 32.2 bits (64), Expect(2) = 0.001
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2 / +3
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+I K DV+ +A F+ QT+ L I +N AG+A+
Sbjct: 183 AIVCKADVAEPSQVAHLFDTAEQTFGTLHIVVNNAGVAD 299
Score = 29.9 bits (59), Expect(2) = 0.001
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A+VTG + GIG+ + + A +G V V
Sbjct: 12 GRVAIVTGASRGIGREIALHLAEKGAKVVV 101
>gb|DR088948.1|DR088948 RTAL1_5_D08.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_5_D08_A029 5', mRNA sequence
Length = 821
Score = 42.3 bits (86), Expect(2) = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 3 AVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 161
Score = 33.1 bits (66), Expect = 2.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2 / -2
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSA 232
++A P SS S T P + A PMP APPV +A
Sbjct: 124 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITA 2
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 132 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 248
Score = 22.1 bits (42), Expect(2) = 0.001
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 495 LAQHGIRVNCVSP 533
>gb|CF402897.1|CF402897 RTWW1_23_G03.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_23_G03_A015 5', mRNA sequence
Length = 670
Score = 44.1 bits (90), Expect = 0.001
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +2 / +3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F++ R + V E K + P + +V+CDVS +++A + ++ Y LDI
Sbjct: 126 FTKHGARVIIADVAYETGKILAESLSPPATYVRCDVSKEQDVSAAVDLAMEKYAQLDIMF 305
Query: 500 NCAGIAN 520
N AGI +
Sbjct: 306 NNAGIVD 326
Score = 42.3 bits (86), Expect = 0.004
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TGGASGIG+ + F + G V + D + E G+ +A
Sbjct: 66 GKVAIITGGASGIGEGIVRLFTKHGARVIIADVAYETGKILA 191
Score = 35.9 bits (72), Expect = 0.37
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A LP S S +T P K+ PMP+APPV A +P
Sbjct: 190 ARILPVSYATSAIMTLAPCFVKSRTMPSPMPDAPPVIIATLP 65
>gb|CO367187.1|CO367187 RTK1_32_E12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_E12_A029 5', mRNA sequence
Length = 834
Score = 44.1 bits (90), Expect = 0.001
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 64 GKVAVITGGASGIGEASAKLFVENGAQVVIADIQDDLGNCLAKSLSPNACYFHCDV 231
Score = 35.0 bits (70), Expect = 0.69
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2 / -2
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++A P SS S T P + A PMP APPV +A +P
Sbjct: 194 DLAKQFPRSS*MSAITTCAPFSTNNLALASPMPLAPPVITATLP 63
>gb|CF399303.1|CF399303 RTDS3_27_G05.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_27_G05_A022 5', mRNA sequence
Length = 669
Score = 43.7 bits (89), Expect = 0.002
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +2 / +3
Query: 203 GEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
G + G A++TGGA GIG+A+ F V + D S+E G+++A + + H
Sbjct: 78 GSKQRLEGKVAIITGGAMGIGEAIVRLFTNHVAKVIIADLSDEVGKKLAESLSPSATYAH 257
Query: 383 GDL 391
D+
Sbjct: 258 CDV 266
Score = 36.3 bits (73), Expect = 0.27
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPAQ 196
A+ LP SS++S +T K+ A P+P APPV A P P +
Sbjct: 223 ASFLPTSSDRSAIMTLAT*FVKSRTMASPIPMAPPVIIATFPSSRCFDPLE 71
Score = 34.5 bits (69), Expect = 0.95
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2 / +3
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
PS+ + CDVS ++ A + ++ + LDI N AGI
Sbjct: 237 PSATYAHCDVSKEQDVKAVVDLAIEKHGQLDIMYNNAGI 353
>gb|CO174881.1|CO174881 NDL1_46_H02.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_46_H02_A029 5', mRNA sequence
Length = 683
Score = 43.7 bits (89), Expect = 0.002
Identities = 22/87 (25%), Positives = 43/87 (49%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAV 577
P++ F+ CDVS ++++A + + + LDI N AG + V + +
Sbjct: 74 PAATFLHCDVSKEEDMSAAVDLAIAKHGQLDIMFNNAGTIDIVAVGSVAEYEVEQFDRVM 253
Query: 578 NVNLVAVIDGTRIASQIMRNQKKPGVI 658
VN+ + G + A+++M +KK +I
Sbjct: 254 RVNVRGTMLGIKHAARVMIPRKKGTII 334
>gb|DR072746.1|DR072746 RTDK1_28_G07.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_28_G07_A029 3', mRNA sequence
Length = 534
Score = 43.7 bits (89), Expect = 0.002
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 419 GKVAVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 252
Score = 36.8 bits (74), Expect = 0.19
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2 / +1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++A P SS S T P + A PMP APPV +A +P
Sbjct: 289 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITATLP 420
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / -2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 281 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 165
>gb|DR079919.1|DR079919 RTFEPL1_18_E03.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_18_E03_A029 5', mRNA sequence
Length = 405
Score = 43.7 bits (89), Expect = 0.002
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ FA+ G V + D + + GR++
Sbjct: 124 GKVAIVTGGAAGIGEAIVRLFAKHGAKVIIADVA*KGGRKL 246
Score = 37.3 bits (75), Expect = 0.14
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2 / +1
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + K K L + +V CDVS ++++A + + Y LDI N AG +
Sbjct: 211 IADVA*KGGRKLEESLSPAVATYVHCDVSKEEDVSAAVDVAMDKYGQLDIMYNNAGTNDS 390
Query: 524 TLV 532
LV
Sbjct: 391 VLV 399
Score = 33.6 bits (67), Expect(2) = 0.004
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = -2 / -2
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S +T P A + A PMP APPVT A P
Sbjct: 239 LPPFYATSAIMTFAPCFANSRTMASPMPAAPPVTIATFP 123
Score = 26.7 bits (52), Expect(2) = 0.004
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2 / -2
Query: 531 TSVLLAIPAQLMQISSPLYVCTCFSKQAARLSALLTSHLT 412
T L +PA L +SS Y+ S A S+LLTS T
Sbjct: 398 TKTLSLVPALLYIMSSWPYLSMATSTAALTSSSLLTSQCT 279
>gb|DR388826.1|DR388826 RTHG1_30_E06.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_30_E06_A029 5', mRNA sequence
Length = 521
Score = 43.7 bits (89), Expect = 0.002
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 14 GKVAVITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHFDV 181
Score = 36.8 bits (74), Expect = 0.19
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2 / -3
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++A P SS S T P + A PMP APPV +A +P
Sbjct: 144 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVITATLP 13
>gb|DN465657.1|DN465657 EST961456 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJT03 5' end, mRNA sequence
Length = 926
Score = 32.2 bits (64), Expect(2) = 0.002
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2 / +3
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+I K DV+ +A F+ QT+ L I +N AG+A+
Sbjct: 183 AIVCKADVAEPSQVAHLFDTAEQTFGTLHIVVNNAGVAD 299
Score = 29.0 bits (57), Expect(2) = 0.002
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A+VTG + GIG+ + A +G V V
Sbjct: 12 GRVAIVTGASRGIGREIAFHLAEKGAKVVV 101
>gb|CX715189.1|CX715189 RTPQ1_32_F12.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_32_F12_A032 3', mRNA sequence
Length = 773
Score = 32.2 bits (64), Expect(2) = 0.002
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2 / -2
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+I K DV+ +A F+ QT+ L I +N AG+A+
Sbjct: 580 AIVCKADVAEPSQVAHLFDTAEQTFGTLHIVVNNAGVAD 464
Score = 29.0 bits (57), Expect(2) = 0.002
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A+VTG + GIG+ + A +G V V
Sbjct: 751 GRVAIVTGASRGIGREIAFHLAEKGAKVVV 662
>gb|DR011995.1|DR011995 HEAT1_9_H04.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_9_H04_A029 3', mRNA sequence
Length = 317
Score = 43.2 bits (88), Expect = 0.002
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2 / -1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGASGIG+ F G V + D ++ G +A + FH D+
Sbjct: 281 GKVAVITGGASGIGEESAKLFVENGAQVVIADIQDDFGNRLAKSLAPNACYFHCDV 114
Score = 32.7 bits (65), Expect = 3.4
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -2 / +1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPA 199
++A P SS S T P + + P+P APPV +A +P +S A
Sbjct: 151 DLAKRFPKSS*MSAITTCAPFSTNNLALSSPIPLAPPVITATLPSSLILSTA 306
>gb|DR118501.1|DR118501 RTMG1_17_H12.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_H12_A029 3', mRNA sequence
Length = 380
Score = 43.2 bits (88), Expect = 0.002
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGA GIG+A+ F G V + D ++E G+ +A + + H D+
Sbjct: 147 GKVAIITGGAMGIGEAITRLFTDHGAKVIIADLADEAGKILAESLSPPATYVHCDV 314
Score = 36.3 bits (73), Expect = 0.27
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISP 202
A LP SS +S +T P K+ A P+P APPV A +P P
Sbjct: 271 ARILPASSARSAIMTLAP*SVKSRVMASPIPIAPPVIIATLPSSRRFDP 125
Score = 31.3 bits (62), Expect = 8.8
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +2 / +3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDI 493
F++ + + + E K + P + +V CDVS ++++ + ++ Y LDI
Sbjct: 207 FTDHGAKVIIADLADEAGKILAESLSPPATYVHCDVSKEHDISSVVDLAMEKYGQLDI 380
>gb|DR118584.1|DR118584 RTMG1_17_H12.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_H12_A029 5', mRNA sequence
Length = 381
Score = 43.2 bits (88), Expect = 0.002
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGA GIG+A+ F G V + D ++E G+ +A + + H D+
Sbjct: 128 GKVAIITGGAMGIGEAITRLFTDHGAKVIIADLADEAGKILAESLSPPATYVHCDV 295
Score = 36.3 bits (73), Expect = 0.27
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISP 202
A LP SS +S +T P K+ A P+P APPV A +P P
Sbjct: 252 ARILPASSARSAIMTLAP*SVKSRVMASPIPIAPPVIIATLPSSRRFDP 106
Score = 31.3 bits (62), Expect = 8.8
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +2 / +2
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDI 493
F++ + + + E K + P + +V CDVS ++++ + ++ Y LDI
Sbjct: 188 FTDHGAKVIIADLADEAGKILAESLSPPATYVHCDVSKEHDISSVVDLAMEKYGQLDI 361
>gb|DR118658.1|DR118658 RTMG1_18_H12.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_18_H12_A029 3', mRNA sequence
Length = 401
Score = 43.2 bits (88), Expect = 0.002
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGA GIG+A+ F G V + D ++E G+ +A + + H D+
Sbjct: 147 GKVAIITGGAMGIGEAITRLFTDHGAKVIIADLADEAGKILAESLSPPATYVHCDV 314
Score = 36.3 bits (73), Expect = 0.27
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISP 202
A LP SS +S +T P K+ A P+P APPV A +P P
Sbjct: 271 ARILPASSARSAIMTLAP*SVKSRVMASPIPIAPPVIIATLPSSRRFDP 125
>gb|DR118746.1|DR118746 RTMG1_18_H12.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_18_H12_A029 5', mRNA sequence
Length = 383
Score = 43.2 bits (88), Expect = 0.002
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGA GIG+A+ F G V + D ++E G+ +A + + H D+
Sbjct: 130 GKVAIITGGAMGIGEAITRLFTDHGAKVIIADLADEAGKILAESLSPPATYVHCDV 297
Score = 36.3 bits (73), Expect = 0.27
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISP 202
A LP SS +S +T P K+ A P+P APPV A +P P
Sbjct: 254 ARILPASSARSAIMTLAP*SVKSRVMASPIPIAPPVIIATLPSSRRFDP 108
Score = 31.3 bits (62), Expect = 8.8
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +2 / +1
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDI 493
F++ + + + E K + P + +V CDVS ++++ + ++ Y LDI
Sbjct: 190 FTDHGAKVIIADLADEAGKILAESLSPPATYVHCDVSKEHDISSVVDLAMEKYGQLDI 363
>gb|DR118981.1|DR118981 RTMG1_20_H12.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_20_H12_A029 3', mRNA sequence
Length = 404
Score = 43.2 bits (88), Expect = 0.002
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGA GIG+A+ F G V + D ++E G+ +A + + H D+
Sbjct: 147 GKVAIITGGAMGIGEAITRLFTDHGAKVIIADLADEAGKILAESLSPPATYVHCDV 314
Score = 36.3 bits (73), Expect = 0.27
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISP 202
A LP SS +S +T P K+ A P+P APPV A +P P
Sbjct: 271 ARILPASSARSAIMTLAP*SVKSRVMASPIPIAPPVIIATLPSSRRFDP 125
Score = 31.3 bits (62), Expect = 8.8
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +2 / +3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDI 493
F++ + + + E K + P + +V CDVS ++++ + ++ Y LDI
Sbjct: 207 FTDHGAKVIIADLADEAGKILAESLSPPATYVHCDVSKEHDISSVVDLAMEKYGQLDI 380
>gb|DR119066.1|DR119066 RTMG1_20_H12.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_20_H12_A029 5', mRNA sequence
Length = 376
Score = 43.2 bits (88), Expect = 0.002
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G A++TGGA GIG+A+ F G V + D ++E G+ +A + + H D+
Sbjct: 123 GKVAIITGGAMGIGEAITRLFTDHGAKVIIADLADEAGKILAESLSPPATYVHCDV 290
Score = 36.3 bits (73), Expect = 0.27
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISP 202
A LP SS +S +T P K+ A P+P APPV A +P P
Sbjct: 247 ARILPASSARSAIMTLAP*SVKSRVMASPIPIAPPVIIATLPSSRRFDP 101
Score = 31.3 bits (62), Expect = 8.8
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +2 / +3
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDI 493
F++ + + + E K + P + +V CDVS ++++ + ++ Y LDI
Sbjct: 183 FTDHGAKVIIADLADEAGKILAESLSPPATYVHCDVSKEHDISSVVDLAMEKYGQLDI 356
>gb|DR161882.1|DR161882 RTFE1_14_B01.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_14_B01_A029 5', mRNA sequence
Length = 405
Score = 43.2 bits (88), Expect = 0.002
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A+VTGGA+GIG+A+ F + G V + D +E+ GR++
Sbjct: 81 GKVAVVTGGAAGIGEAIVRLFIKLGAKVIIADVAEKAGRKL 203
Score = 39.1 bits (79), Expect = 0.040
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2 / +3
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANK 523
+A + +K K L + +V CDVS +++A + + Y LDI N AG ++
Sbjct: 168 IADVAEKAGRKLEESLSPAVATYVHCDVSKEKDVSAAVDVAMDKYGQLDIMYNNAGTNDR 347
Query: 524 TLV 532
LV
Sbjct: 348 FLV 356
Score = 36.3 bits (73), Expect(2) = 0.009
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -2 / -3
Query: 339 LPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
LP S S +T P L A PMP APPVT+A P
Sbjct: 196 LPAFSATSAIMTLAPSLMNNRTMASPMPAAPPVTTATFP 80
Score = 22.6 bits (43), Expect(2) = 0.009
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2 / -3
Query: 531 TSVLLAIPAQLMQISSPLYVCTCFSKQAARLSALLTSHLT 412
T L +PA L +SS Y+ S A +LLTS T
Sbjct: 355 TKNLSLVPALLYIMSSWPYLSMATSTAALTSFSLLTSQCT 236
>gb|DR743995.1|DR743995 RTCU1_19_C02.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_19_C02_A029 5', mRNA sequence
Length = 792
Score = 43.2 bits (88), Expect = 0.002
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +2 / +1
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPSSIF 412
A++TGGASGIG+A F + G V + D ++ G+++A + H D+ +
Sbjct: 142 AIITGGASGIGEATVRLFTKHGAKVIIADIADAAGKKLAESLSPSAIFLHCDVTNEQDVG 321
Query: 413 VKCDVS 430
D++
Sbjct: 322 AAVDLA 339
Score = 42.3 bits (86), Expect = 0.004
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +2 / +1
Query: 308 TVVDFSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGL 487
TV F++ + + + K + PS+IF+ CDV+N ++ A + V+ + L
Sbjct: 181 TVRLFTKHGAKVIIADIADAAGKKLAESLSPSAIFLHCDVTNEQDVGAAVDLAVEKHGQL 360
Query: 488 DICINCAGI 514
DI N AGI
Sbjct: 361 DIMFNNAGI 387
Score = 34.5 bits (69), Expect = 0.95
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
A+ P +S S +T P K+ A PMP+APPV A +
Sbjct: 257 ASFFPAASAMSAIMTLAPCFVKSRTVASPMPDAPPVIIATL 135
>gb|DR090135.1|DR090135 RTAL1_12_H09.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_12_H09_A029 5', mRNA sequence
Length = 623
Score = 34.1 bits (68), Expect(2) = 0.002
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2 / +2
Query: 230 SALVTGGASGIGKALCIAFARRGLFVTVVDFSEENG 337
+ALVTGG GIG A +A A G V +V +G
Sbjct: 29 NALVTGGTRGIGAACALALAEAGANVCLVQREPTDG 136
Score = 31.8 bits (63), Expect = 6.4
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -2 / -3
Query: 315 TTVTNKPLLAKAIQSAFPMPEAPPVTSA 232
T T P A+A A PMP PPVTSA
Sbjct: 114 TRHTLAPASARARAHAAPMPRVPPVTSA 31
Score = 29.0 bits (57), Expect(2) = 0.002
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2 / +2
Query: 644 KPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
+ G I+N S P Y+AAKG + T+SLS
Sbjct: 419 REGKIVNFCSLMSYQGGLTIPAYAAAKGALGQLTKSLS 532
>gb|CF385521.1|CF385521 RTDR1_4_C11.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_4_C11_A015 5', mRNA
sequence
Length = 728
Score = 40.9 bits (83), Expect(2) = 0.003
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2 / +1
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
A++TGG+SGIG+A F G V + D ++ G +A + FH D+
Sbjct: 4 AVITGGSSGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 162
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 133 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 249
Score = 22.1 bits (42), Expect(2) = 0.003
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 496 LAQHGIRVNCVSP 534
>gb|CO167733.1|CO167733 FLD1_70_G05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_70_G05_A029 5', mRNA sequence
Length = 708
Score = 32.2 bits (64), Expect(2) = 0.003
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2 / +1
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+I K DV+ +A F+ QT+ L I +N AG+A+
Sbjct: 166 AIVCKADVAEPSQVAHLFDTAEQTFGTLHIVVNNAGVAD 282
Score = 28.6 bits (56), Expect(2) = 0.003
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2 / +1
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTV 313
A+VTG + GIG+ + + A +G V V
Sbjct: 4 AIVTGASRGIGREIALHLAEKGAKVVV 84
>gb|DR024514.1|DR024514 STRS1_65_B08.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_65_B08_A034 5', mRNA sequence
Length = 600
Score = 32.2 bits (64), Expect(2) = 0.003
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2 / +2
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+I K DV+ +A F+ QT+ L I +N AG+A+
Sbjct: 164 AIVCKADVAEPSQVAHLFDTAEQTFGTLHIVVNNAGVAD 280
Score = 28.6 bits (56), Expect(2) = 0.003
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTV 313
A+VTG + GIG+ + + A +G V V
Sbjct: 2 AIVTGASRGIGREIALHLAEKGAKVVV 82
>gb|DN630871.1|DN630871 EST981687 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAC093, mRNA sequence
Length = 740
Score = 39.6 bits (80), Expect(2) = 0.003
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
G ALVTGG SGIG+A+C FA G V S + ++
Sbjct: 235 GKVALVTGGDSGIGRAVCHQFALEGATVAFTYISGQEDKD 354
Score = 23.5 bits (45), Expect(2) = 0.003
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 710 YSAAKGGVVMFTR 748
YS+ KG +V FTR
Sbjct: 700 YSSTKGAIVSFTR 738
>gb|CF391226.1|CF391226 RTDR3_4_B07.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_4_B07_A022 5', mRNA
sequence
Length = 612
Score = 40.5 bits (82), Expect(2) = 0.003
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2 / +2
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
++TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 5 VITGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 160
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 131 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 247
Score = 31.3 bits (62), Expect = 8.8
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -2 / -1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPV 241
++A P SS S T P + A PMP APPV
Sbjct: 123 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPV 10
Score = 22.1 bits (42), Expect(2) = 0.003
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 494 LAQHGIRVNCVSP 532
>gb|DR691467.1|DR691467 EST1081554 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAD876 3' end, mRNA sequence
Length = 854
Score = 31.8 bits (63), Expect(2) = 0.003
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTV 313
A+VTG + GIGKA+ ++ R G V V
Sbjct: 368 AVVTGASRGIGKAIALSLGRAGCKVLV 448
Score = 31.3 bits (62), Expect(2) = 0.003
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2 / +2
Query: 638 QKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSL 754
+K+ G +INI S GL YSAAK V+ T+++
Sbjct: 737 KKRKGRVINIASVVGLTGNIGQANYSAAKARVIGLTKTV 853
>gb|DR024032.1|DR024032 STRS1_61_G01.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_61_G01_A034 5', mRNA sequence
Length = 752
Score = 42.8 bits (87), Expect = 0.003
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A++TGGASGIG+A F + G V + D + G+++A + H D+
Sbjct: 105 GKVAIITGGASGIGEATVRLFTKHGAKVIIADVGDAAGKKLAESLSPPAIFVHCDVTNEQ 284
Query: 404 SIFVKCDVS 430
+ D++
Sbjct: 285 DVGAAVDLT 311
Score = 41.4 bits (84), Expect = 0.008
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +2 / +3
Query: 308 TVVDFSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGL 487
TV F++ + + V K + P +IFV CDV+N ++ A + V+ + L
Sbjct: 153 TVRLFTKHGAKVIIADVGDAAGKKLAESLSPPAIFVHCDVTNEQDVGAAVDLTVEKHGQL 332
Query: 488 DICINCAGI 514
DI N AGI
Sbjct: 333 DIMFNNAGI 359
Score = 37.7 bits (76), Expect(2) = 0.005
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ P +S S +T P K+ A PMP+APPV A +P
Sbjct: 229 ASFFPAASPTSAIMTLAPCFVKSRTVASPMPDAPPVIIATLP 104
Score = 22.1 bits (42), Expect(2) = 0.005
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -2 / -2
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
IPA L ISS T S A +L+TS T I G
Sbjct: 358 IPALLNIISS*PCFSTVKSTAAPTSCSLVTSQCTKIAGG 242
>gb|DR092321.1|DR092321 RTAL1_28_A09.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_28_A09_A029 5', mRNA sequence
Length = 510
Score = 42.8 bits (87), Expect = 0.003
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TGGASGIG+A F + G V + D ++ G+++A
Sbjct: 72 GKVAIITGGASGIGEATVRLFTKHGAKVIIADVADAAGKKLA 197
Score = 39.6 bits (80), Expect = 0.029
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +2 / +3
Query: 308 TVVDFSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGL 487
TV F++ + + V K + P +IFV+C+V+N ++ A + V+ + L
Sbjct: 120 TVRLFTKHGAKVIIADVADAAGKKLAESLSPPAIFVRCEVTNEQDVGAAVDLTVEKHGQL 299
Query: 488 DICINCAG 511
DI N AG
Sbjct: 300 DIMFNNAG 323
Score = 37.7 bits (76), Expect = 0.10
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ P +S S +T P K+ A PMP+APPV A +P
Sbjct: 196 ASFFPAASATSAIMTLAPCFVKSRTVASPMPDAPPVIIATLP 71
>gb|DR384323.1|DR384323 RTHG1_1_B07.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_1_B07_A029 5', mRNA sequence
Length = 731
Score = 42.8 bits (87), Expect = 0.003
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TGGASGIG+A F + G V + D ++ G+++A
Sbjct: 133 GKVAIITGGASGIGEATVRLFTKHGAKVIIADVADAAGKKLA 258
Score = 40.0 bits (81), Expect = 0.021
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2 / +1
Query: 308 TVVDFSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGL 487
TV F++ + + V K + P +IFV C+V+N ++ A + V+ + L
Sbjct: 181 TVRLFTKHGAKVIIADVADAAGKKLAESLSPPAIFVHCEVTNEQDVGAAVDLTVEKHGQL 360
Query: 488 DICINCAGI 514
DI N AGI
Sbjct: 361 DIMFNNAGI 387
Score = 37.7 bits (76), Expect(2) = 0.005
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ P +S S +T P K+ A PMP+APPV A +P
Sbjct: 257 ASFFPAASATSAIMTLAPCFVKSRTVASPMPDAPPVIIATLP 132
Score = 22.1 bits (42), Expect(2) = 0.005
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -2 / -1
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
IPA L ISS T S A +L+TS T I G
Sbjct: 386 IPALLNIISS*PCFSTVKSTAAPTSCSLVTSQCTKIAGG 270
>gb|DR386863.1|DR386863 RTHG1_17_H07.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_17_H07_A029 5', mRNA sequence
Length = 751
Score = 42.8 bits (87), Expect = 0.003
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TGGASGIG+A F + G V + D ++ G+++A
Sbjct: 74 GKVAIITGGASGIGEATVRLFTKHGAKVIIADVADAAGKKLA 199
Score = 40.0 bits (81), Expect = 0.021
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +2 / +2
Query: 308 TVVDFSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGL 487
TV F++ + + V K + P +IFV CDV+N ++ A V+ + L
Sbjct: 122 TVRLFTKHGAKVIIADVADAAGKKLAESLSPPAIFVHCDVTNEQDVGAAVYLTVEKHGQL 301
Query: 488 DICINCAGI 514
DI N AGI
Sbjct: 302 DIMFNNAGI 328
Score = 37.7 bits (76), Expect = 0.10
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ P +S S +T P K+ A PMP+APPV A +P
Sbjct: 198 ASFFPAASATSAIMTLAPCFVKSRTVASPMPDAPPVIIATLP 73
>gb|DR687863.1|DR687863 EST1077946 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABX46 3' end, mRNA sequence
Length = 846
Score = 42.8 bits (87), Expect = 0.003
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A++TGGASGIG+A F + G V + D + G+++A + H D+
Sbjct: 178 GKVAIITGGASGIGEATVRLFTKHGAKVIIADVGDAAGKKLAESLSPPAIFVHCDVTNEQ 357
Query: 404 SIFVKCDVS 430
+ D++
Sbjct: 358 DVGAAVDLT 384
Score = 41.4 bits (84), Expect = 0.008
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +2 / +1
Query: 308 TVVDFSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGL 487
TV F++ + + V K + P +IFV CDV+N ++ A + V+ + L
Sbjct: 226 TVRLFTKHGAKVIIADVGDAAGKKLAESLSPPAIFVHCDVTNEQDVGAAVDLTVEKHGQL 405
Query: 488 DICINCAGI 514
DI N AGI
Sbjct: 406 DIMFNNAGI 432
Score = 37.7 bits (76), Expect(2) = 0.005
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ P +S S +T P K+ A PMP+APPV A +P
Sbjct: 302 ASFFPAASPTSAIMTLAPCFVKSRTVASPMPDAPPVIIATLP 177
Score = 22.1 bits (42), Expect(2) = 0.005
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -2 / -2
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
IPA L ISS T S A +L+TS T I G
Sbjct: 431 IPALLNIISS*PCFSTVKSTAAPTSCSLVTSQCTKIAGG 315
>gb|DT634605.1|DT634605 EST1149536 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG778 3' end, mRNA sequence
Length = 752
Score = 42.8 bits (87), Expect = 0.003
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A++TGGASGIG+A F + G V + D + G+++A + H D+
Sbjct: 186 GKVAIITGGASGIGEATVRLFTKHGAKVIIADVGDAAGKKLAESLSPPAIFVHCDVTNEQ 365
Query: 404 SIFVKCDVS 430
+ D++
Sbjct: 366 DVGAAVDLT 392
Score = 41.4 bits (84), Expect = 0.008
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +2 / +3
Query: 308 TVVDFSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGL 487
TV F++ + + V K + P +IFV CDV+N ++ A + V+ + L
Sbjct: 234 TVRLFTKHGAKVIIADVGDAAGKKLAESLSPPAIFVHCDVTNEQDVGAAVDLTVEKHGQL 413
Query: 488 DICINCAGI 514
DI N AGI
Sbjct: 414 DIMFNNAGI 440
Score = 37.7 bits (76), Expect(2) = 0.005
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ P +S S +T P K+ A PMP+APPV A +P
Sbjct: 310 ASFFPAASPTSAIMTLAPCFVKSRTVASPMPDAPPVIIATLP 185
Score = 22.1 bits (42), Expect(2) = 0.005
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -2 / -2
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
IPA L ISS T S A +L+TS T I G
Sbjct: 439 IPALLNIISS*PCFSTVKSTAAPTSCSLVTSQCTKIAGG 323
>gb|CO161283.1|CO161283 FLD1_27_F12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_27_F12_A029 5', mRNA sequence
Length = 863
Score = 32.2 bits (64), Expect(2) = 0.004
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2 / +1
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+I K DV+ +A F+ QT+ L I +N AG+A+
Sbjct: 166 AIVCKADVAEPSQVAHLFDTAEQTFGTLHIVVNNAGVAD 282
Score = 28.1 bits (55), Expect(2) = 0.004
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2 / +1
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTV 313
A+VTG + GIG+ + + A +G V V
Sbjct: 4 AIVTGASRGIGREIALHLAEQGAKVVV 84
>gb|CF389311.1|CF389311 RTDR2_9_E01.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_9_E01_A021 5', mRNA
sequence
Length = 578
Score = 32.2 bits (64), Expect(2) = 0.004
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G ALVTGG GIG+ G V V D VA
Sbjct: 230 GQVALVTGGGQGIGRGFAHGLGEAGAKVAVADLELIRAETVA 355
Score = 31.8 bits (63), Expect = 6.4
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2 / -3
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++ AT S KS T T P + PMP PPVT A P
Sbjct: 363 SSFATVSARMSSKSATATLAPASPSPCANPRPMP*PPPVTKATCP 229
Score = 28.1 bits (55), Expect(2) = 0.004
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2 / +2
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
++ ++ DVS + A +K V T+ L I N AGI
Sbjct: 383 ALAIQVDVSKKEECEAMVKKVVDTWGQLHIAFNNAGI 493
>gb|DN611622.1|DN611622 EST964672 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAB466, mRNA sequence
Length = 813
Score = 40.5 bits (82), Expect(2) = 0.004
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
G ALVTGG SGIG+A+C FA G+ V S + ++
Sbjct: 626 GKVALVTGGDSGIGRAVCHQFALEGVTVAFTYISGQEDKD 507
Score = 22.1 bits (42), Expect(2) = 0.004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / -2
Query: 710 YSAAKGGVVMFTR 748
Y++ KG +V FTR
Sbjct: 161 YTSTKGAIVSFTR 123
>gb|DN612925.1|DN612925 EST965975 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABL87, mRNA sequence
Length = 854
Score = 40.5 bits (82), Expect(2) = 0.004
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2 / -1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
G ALVTGG SGIG+A+C FA G+ V S + ++
Sbjct: 788 GKVALVTGGDSGIGRAVCHQFALEGVTVAFTYISGQEDKD 669
Score = 22.1 bits (42), Expect(2) = 0.004
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / -1
Query: 710 YSAAKGGVVMFTR 748
Y++ KG +V FTR
Sbjct: 323 YTSTKGAIVSFTR 285
>gb|CF388826.1|CF388826 RTDR2_15_B06.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_15_B06_A021 5', mRNA
sequence
Length = 681
Score = 42.3 bits (86), Expect = 0.004
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGG SGIG+A+C FA G V V S + +QK D + P
Sbjct: 77 GKVAVVTGGDSGIGRAVCYHFALEGATVAFVYLSPAEEVDAEETLQKLREYKTADAKDPM 256
Query: 404 SI 409
I
Sbjct: 257 KI 262
Score = 40.5 bits (82), Expect = 0.015
Identities = 25/64 (39%), Positives = 31/64 (48%)
Frame = -2 / -1
Query: 414 TNIEDGILRSP*NLLFSF*TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTS 235
T I G L S SF + S + E+ T T P AK +A PMPE+PPVT+
Sbjct: 267 TGIFMGSLASAVLYSLSFCRVSSASTSSAGER*TKATVAPSKAKW*HTALPMPESPPVTT 88
Query: 234 ADMP 223
A P
Sbjct: 87 ATFP 76
>gb|DT635992.1|DT635992 EST1150923 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGM85 3' end, mRNA sequence
Length = 754
Score = 42.3 bits (86), Expect = 0.004
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A++TGGASGIG+A F + G V + D + G+++A + H D+
Sbjct: 183 GEVAIITGGASGIGEATVRLFTKHGAKVIIADVGDAAGKKLAESLSPPAIFVHCDVTNEQ 362
Query: 404 SIFVKCDVS 430
+ D++
Sbjct: 363 DVGAAVDLT 389
Score = 41.4 bits (84), Expect = 0.008
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +2 / +3
Query: 308 TVVDFSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGL 487
TV F++ + + V K + P +IFV CDV+N ++ A + V+ + L
Sbjct: 231 TVRLFTKHGAKVIIADVGDAAGKKLAESLSPPAIFVHCDVTNEQDVGAAVDLTVEKHGQL 410
Query: 488 DICINCAGI 514
DI N AGI
Sbjct: 411 DIMFNNAGI 437
Score = 36.3 bits (73), Expect(2) = 0.012
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ P +S S +T P K+ A PMP+APPV A P
Sbjct: 307 ASFFPAASPTSAIMTLAPCFVKSRTVASPMPDAPPVIIATSP 182
Score = 22.1 bits (42), Expect(2) = 0.012
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -2 / -1
Query: 513 IPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDG 397
IPA L ISS T S A +L+TS T I G
Sbjct: 436 IPALLNIISS*PCFSTVKSTAAPTSCSLVTSQCTKIAGG 320
>gb|DR048401.1|DR048401 RTBOR1_8_D10.g2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_8_D10_A029 5', mRNA sequence
Length = 687
Score = 32.2 bits (64), Expect(2) = 0.005
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2 / +1
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+I K DV+ +A F+ QT+ L I +N AG+A+
Sbjct: 166 AIVCKADVAEPSQVAHLFDTAEQTFGTLHIVVNNAGVAD 282
Score = 27.6 bits (54), Expect(2) = 0.005
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2 / +1
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTV 313
A+VTG + GIG+ + A +G V V
Sbjct: 4 AIVTGASRGIGREIAFHLAEKGAKVVV 84
>gb|DR110062.1|DR110062 RTS1_7_C01.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_7_C01_A029 5', mRNA sequence
Length = 378
Score = 41.8 bits (85), Expect = 0.006
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G AL+TGGASGI +A F G V + D ++ G +A + FH D+
Sbjct: 122 GKVALITGGASGIREASAKLFVENGAQVVIADIQDDLGNCLAKSLSPNACYFHCDV 289
Score = 32.2 bits (64), Expect = 4.6
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2 / +2
Query: 320 FSEENGREVATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICI 499
F E + V +Q + P++ + CDVS +++A + V+ + LDI
Sbjct: 182 FVENGAQVVIADIQDDLGNCLAKSLSPNACYFHCDVSKETDVSALVDYTVEKHGHLDIMF 361
Query: 500 NCAGI 514
+ AGI
Sbjct: 362 SNAGI 376
>gb|DR110065.1|DR110065 RTS1_7_D01.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_7_D01_A029 5', mRNA sequence
Length = 454
Score = 41.8 bits (85), Expect = 0.006
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G AL+TGGASGI +A F G V + D ++ G +A + FH D+
Sbjct: 105 GKVALITGGASGIREASAKLFVENGAQVVIADIQDDLGNCLAKSLSPNACYFHCDV 272
>gb|DN609357.1|DN609357 EST962407 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAAB88, mRNA sequence
Length = 799
Score = 39.6 bits (80), Expect(2) = 0.007
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2 / -3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
G ALVTGG SGIG+A+C FA G V S + ++
Sbjct: 788 GKVALVTGGDSGIGRAVCHQFALEGATVAFTYISGQEDKD 669
Score = 22.1 bits (42), Expect(2) = 0.007
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / -3
Query: 710 YSAAKGGVVMFTR 748
Y++ KG +V FTR
Sbjct: 323 YTSTKGAIVSFTR 285
>gb|DN609962.1|DN609962 EST963012 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAAJ72, mRNA sequence
Length = 812
Score = 39.6 bits (80), Expect(2) = 0.007
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
G ALVTGG SGIG+A+C FA G V S + ++
Sbjct: 175 GKVALVTGGDSGIGRAVCHQFALEGATVAFTYISGQEDKD 294
Score = 22.1 bits (42), Expect(2) = 0.007
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 710 YSAAKGGVVMFTR 748
Y++ KG +V FTR
Sbjct: 640 YTSTKGAIVSFTR 678
>gb|DN615268.1|DN615268 EST968318 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSACD82, mRNA sequence
Length = 855
Score = 39.6 bits (80), Expect(2) = 0.008
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
G ALVTGG SGIG+A+C FA G V S + ++
Sbjct: 788 GKVALVTGGDSGIGRAVCHQFALEGATVAFTYISGQEDKD 669
Score = 22.1 bits (42), Expect(2) = 0.008
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / -2
Query: 710 YSAAKGGVVMFTR 748
Y++ KG +V FTR
Sbjct: 323 YTSTKGAIVSFTR 285
>gb|DN613726.1|DN613726 EST966776 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABV68, mRNA sequence
Length = 895
Score = 39.6 bits (80), Expect(2) = 0.008
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
G ALVTGG SGIG+A+C FA G V S + ++
Sbjct: 295 GKVALVTGGDSGIGRAVCHQFALEGATVAFTYISGQEDKD 414
Score = 22.1 bits (42), Expect(2) = 0.008
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 710 YSAAKGGVVMFTR 748
Y++ KG +V FTR
Sbjct: 760 YTSTKGAIVSFTR 798
>gb|CF472227.1|CF472227 RTDS1_5_A07.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_5_A07_A015 5', mRNA sequence
Length = 717
Score = 41.4 bits (84), Expect = 0.008
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
AT FSS + T T PL A+A + PMPE PPVT A +
Sbjct: 189 ATRSSFSSVRPTMYTLAPLTARAWVAIRPMPEPPPVTRATL 67
Score = 37.7 bits (76), Expect = 0.10
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
ALVTGG SGIG A A G V +V +EE VA L + N
Sbjct: 74 ALVTGGGSGIGLMATQALAVNGAKVYIVGRTEEKLERVAELYAQNN 211
>gb|DN611492.1|DN611492 EST964542 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAB287, mRNA sequence
Length = 903
Score = 39.6 bits (80), Expect(2) = 0.008
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
G ALVTGG SGIG+A+C FA G V S + ++
Sbjct: 154 GKVALVTGGDSGIGRAVCHQFALEGATVAFTYISGQEDKD 273
Score = 22.1 bits (42), Expect(2) = 0.008
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 710 YSAAKGGVVMFTR 748
Y++ KG +V FTR
Sbjct: 619 YTSTKGAIVSFTR 657
>gb|DN611066.1|DN611066 EST964116 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAAX39, mRNA sequence
Length = 909
Score = 39.6 bits (80), Expect(2) = 0.008
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
G ALVTGG SGIG+A+C FA G V S + ++
Sbjct: 265 GKVALVTGGDSGIGRAVCHQFALEGATVAFTYISGQEDKD 384
Score = 22.1 bits (42), Expect(2) = 0.008
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 710 YSAAKGGVVMFTR 748
Y++ KG +V FTR
Sbjct: 730 YTSTKGAIVSFTR 768
>gb|DN612193.1|DN612193 EST965243 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABC19, mRNA sequence
Length = 942
Score = 39.6 bits (80), Expect(2) = 0.008
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
G ALVTGG SGIG+A+C FA G V S + ++
Sbjct: 307 GKVALVTGGDSGIGRAVCHQFALEGATVAFTYISGQEDKD 426
Score = 22.1 bits (42), Expect(2) = 0.008
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 710 YSAAKGGVVMFTR 748
Y++ KG +V FTR
Sbjct: 772 YTSTKGAIVSFTR 810
>gb|DN612318.1|DN612318 EST965368 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABE02, mRNA sequence
Length = 962
Score = 39.6 bits (80), Expect(2) = 0.009
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
G ALVTGG SGIG+A+C FA G V S + ++
Sbjct: 328 GKVALVTGGDSGIGRAVCHQFALEGATVAFTYISGQEDKD 447
Score = 22.1 bits (42), Expect(2) = 0.009
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 710 YSAAKGGVVMFTR 748
Y++ KG +V FTR
Sbjct: 794 YTSTKGAIVSFTR 832
>gb|CF402020.1|CF402020 RTWW1_16_E06.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_16_E06_A015 5', mRNA sequence
Length = 750
Score = 29.9 bits (59), Expect(2) = 0.012
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2 / +3
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+I K +V+ +A F+ QT+ L I +N AG+A+
Sbjct: 183 AIVCKANVAEPSQVAHLFDTAEQTFGTLHIVVNNAGVAD 299
Score = 28.6 bits (56), Expect(2) = 0.012
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTV 313
A+VTG + GIG+ + + A +G V V
Sbjct: 21 AIVTGASRGIGREIALHLAEKGAKVVV 101
>gb|DR058444.1|DR058444 RTNIT1_11_G06.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_11_G06_A029 5', mRNA sequence
Length = 765
Score = 38.6 bits (78), Expect(2) = 0.013
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2 / +2
Query: 242 TGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
TGGASGIG+A F G V + D ++ G +A + FH D+
Sbjct: 11 TGGASGIGEASAKLFVENGAQVVIADIRDDLGNCLAKSLSPNACYFHCDV 160
Score = 31.8 bits (63), Expect = 6.4
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2 / -1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVT 238
++A P SS S T P + A PMP APPV+
Sbjct: 123 DLAKQFPRSSRMSAITTCAPFSTNNLALASPMPLAPPVS 7
Score = 31.8 bits (63), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2 / +2
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ + CDVS +++A + V+ + LDI + AGI
Sbjct: 131 PNACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGI 247
Score = 22.1 bits (42), Expect(2) = 0.013
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 761 LKRHGVRVNVLCP 799
L +HG+RVN + P
Sbjct: 494 LAQHGIRVNCVSP 532
>gb|DR691711.1|DR691711 EST1081798 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADB87 3' end, mRNA sequence
Length = 867
Score = 34.5 bits (69), Expect(2) = 0.014
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2 / +3
Query: 218 KPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQ 361
K G A+VTG GIG++ I ARR + + +V S +++A +Q
Sbjct: 336 KYGSWAIVTGPTDGIGRSFAIQLARRKINLVLVGRSPSKFKDLADELQ 479
Score = 26.3 bits (51), Expect(2) = 0.014
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 640 KEARCHNKHW 669
KE RCH +HW
Sbjct: 728 KEERCHREHW 757
>gb|AW010092.1|AW010092 PC01E12 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC01E12, mRNA sequence
Length = 475
Score = 40.5 bits (82), Expect = 0.015
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G +VTGGA GIG+A+ F + G V + + E GR +A + + H D+
Sbjct: 211 GKVPIVTGGAXGIGEAIVRLFTKHGAKVIIXXIAYEAGRTLAESLSPAATFLHCDV 378
Score = 36.3 bits (73), Expect = 0.27
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A+ LP S +T P K+ A PMP APPVT +P
Sbjct: 335 ASVLPASYAMXXIMTLAPCFVKSRTMASPMPXAPPVTIGTLP 210
>gb|DR092493.1|DR092493 STRR1_1_E09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_E09_A033 5', mRNA sequence
Length = 700
Score = 34.1 bits (68), Expect(2) = 0.016
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2 / +1
Query: 218 KPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQ 361
K G A+VTG GIG++ I ARR + + +V S +++A +Q
Sbjct: 274 KYGSWAIVTGPTDGIGRSFAIQLARRKINLVLVGRSPSKLKDLADELQ 417
Score = 26.3 bits (51), Expect(2) = 0.016
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 640 KEARCHNKHW 669
KE RCH +HW
Sbjct: 666 KEERCHREHW 695
>gb|CO362977.1|CO362977 RTK1_6_H07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_6_H07_A029 5', mRNA sequence
Length = 820
Score = 32.2 bits (64), Expect(2) = 0.016
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2 / +1
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+I K DV+ +A F+ QT+ L I +N AG+A+
Sbjct: 157 AIVCKADVAEPSQVAHLFDTAEQTFGTLHIVVNNAGVAD 273
Score = 25.8 bits (50), Expect(2) = 0.016
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2 / +1
Query: 239 VTGGASGIGKALCIAFARRGLFVTV 313
VTG + GIG+ + + A +G V V
Sbjct: 1 VTGASRGIGREIALHLAEKGAKVVV 75
>gb|DR685172.1|DR685172 EST1075249 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAB083 3' end, mRNA sequence
Length = 731
Score = 34.1 bits (68), Expect(2) = 0.016
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2 / +1
Query: 218 KPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQ 361
K G A+VTG GIG++ I ARR + + +V S +++A +Q
Sbjct: 253 KYGSWAIVTGPTDGIGRSFAIQLARRKINLVLVGRSPSKLKDLADELQ 396
Score = 26.3 bits (51), Expect(2) = 0.016
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 640 KEARCHNKHW 669
KE RCH +HW
Sbjct: 645 KEERCHREHW 674
>gb|DR686589.1|DR686589 EST1076667 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABH66 3' end, mRNA sequence
Length = 738
Score = 34.1 bits (68), Expect(2) = 0.017
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2 / +1
Query: 218 KPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQ 361
K G A+VTG GIG++ I ARR + + +V S +++A +Q
Sbjct: 136 KYGSWAIVTGPTDGIGRSFAIQLARRKINLVLVGRSPSKLKDLADELQ 279
Score = 26.3 bits (51), Expect(2) = 0.017
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 640 KEARCHNKHW 669
KE RCH +HW
Sbjct: 528 KEERCHREHW 557
>gb|BQ696984.1|BQ696984 NXPV_047_G08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_047_G08 5' similar to Arabidopsis
thaliana sequence At3g03980 putative short-chain type
dehydrogenase/reductase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 570
Score = 32.2 bits (64), Expect(2) = 0.017
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2 / +1
Query: 404 SIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+I K DV+ +A F+ QT+ L I +N AG+A+
Sbjct: 157 AIVCKADVAEPSQVAHLFDMAEQTFGTLHIVVNNAGVAD 273
Score = 25.8 bits (50), Expect(2) = 0.017
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2 / +1
Query: 239 VTGGASGIGKALCIAFARRGLFVTV 313
VTG + GIG+ + + A +G V V
Sbjct: 1 VTGASRGIGREIALHLAEKGAKVVV 75
>gb|DR686698.1|DR686698 EST1076776 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABI85 3' end, mRNA sequence
Length = 800
Score = 34.1 bits (68), Expect(2) = 0.018
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2 / +1
Query: 218 KPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQ 361
K G A+VTG GIG++ I ARR + + +V S +++A +Q
Sbjct: 370 KYGSWAIVTGPTDGIGRSFAIQLARRKINLVLVGRSPSKLKDLADELQ 513
Score = 26.3 bits (51), Expect(2) = 0.018
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 640 KEARCHNKHW 669
KE RCH +HW
Sbjct: 762 KEERCHREHW 791
>gb|DT633746.1|DT633746 EST1148677 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFY27 3' end, mRNA sequence
Length = 806
Score = 34.1 bits (68), Expect(2) = 0.018
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2 / +3
Query: 218 KPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQ 361
K G A+VTG GIG++ I ARR + + +V S +++A +Q
Sbjct: 378 KYGSWAIVTGPTDGIGRSFAIQLARRKINLVLVGRSPSKLKDLADELQ 521
Score = 26.3 bits (51), Expect(2) = 0.018
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 640 KEARCHNKHW 669
KE RCH +HW
Sbjct: 770 KEERCHREHW 799
>gb|DR685708.1|DR685708 EST1075785 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAB695 3' end, mRNA sequence
Length = 818
Score = 34.1 bits (68), Expect(2) = 0.018
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2 / +3
Query: 218 KPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQ 361
K G A+VTG GIG++ I ARR + + +V S +++A +Q
Sbjct: 336 KYGSWAIVTGPTDGIGRSFAIQLARRKINLVLVGRSPSKLKDLADELQ 479
Score = 26.3 bits (51), Expect(2) = 0.018
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 640 KEARCHNKHW 669
KE RCH +HW
Sbjct: 728 KEERCHREHW 757
>gb|DT638925.1|DT638925 EST1153856 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHL07 3' end, mRNA sequence
Length = 840
Score = 34.1 bits (68), Expect(2) = 0.019
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2 / +2
Query: 218 KPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQ 361
K G A+VTG GIG++ I ARR + + +V S +++A +Q
Sbjct: 341 KYGSWAIVTGPTDGIGRSFAIQLARRKINLVLVGRSPSKLKDLADELQ 484
Score = 26.3 bits (51), Expect(2) = 0.019
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +1
Query: 640 KEARCHNKHW 669
KE RCH +HW
Sbjct: 733 KEERCHREHW 762
>gb|DT633089.1|DT633089 EST1148020 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFR17 3' end, mRNA sequence
Length = 875
Score = 34.1 bits (68), Expect(2) = 0.020
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2 / +2
Query: 218 KPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQ 361
K G A+VTG GIG++ I ARR + + +V S +++A +Q
Sbjct: 344 KYGSWAIVTGPTDGIGRSFAIQLARRKINLVLVGRSPSKLKDLADELQ 487
Score = 26.3 bits (51), Expect(2) = 0.020
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +1
Query: 640 KEARCHNKHW 669
KE RCH +HW
Sbjct: 736 KEERCHREHW 765
>gb|BI643919.1|BI643919 NXPV_129_D01_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_129_D01 5' similar to Arabidopsis
thaliana sequence At4g03140 putative alcohol
dehydrogenase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 303
Score = 40.0 bits (81), Expect = 0.021
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +2 / +3
Query: 203 GEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
G G A++TG A G+G+A+ F + G V + D ++E+ + + + + H
Sbjct: 81 GXQRRLEGKVAIITGAAMGLGEAIARLFTKXGARVIIADIADESXKNLTESLSPPTTYVH 260
Query: 383 GDL 391
D+
Sbjct: 261 CDV 269
>gb|CF399458.1|CF399458 RTDS3_28_E07.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_28_E07_A022 5', mRNA sequence
Length = 662
Score = 40.0 bits (81), Expect = 0.021
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEEN 334
G ++TGG SGIG+A+ + FA G +TV EE+
Sbjct: 116 GRKVIITGGDSGIGRAIALLFALEGADLTVTYLPEEH 226
>gb|CF474105.1|CF474105 RTWW2_18_E09.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_18_E09_A021 5', mRNA sequence
Length = 755
Score = 40.0 bits (81), Expect = 0.021
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
G++A+VTGG SGIG A RG V + + E+G V + K+N
Sbjct: 12 GLTAIVTGGTSGIGTETVRVLALRGARVIMPARNMESGHRVKEAILKDN 158
>gb|CO367235.1|CO367235 RTK1_33_C05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_33_C05_A029 3', mRNA sequence
Length = 796
Score = 40.0 bits (81), Expect = 0.021
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2 / -1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEEN 334
G ++TGG SGIG+A+ + FA G +TV EE+
Sbjct: 625 GRKVIITGGDSGIGRAIALLFALEGADLTVTYLPEEH 515
>gb|DR012991.1|DR012991 HEAT1_16_G06.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_16_G06_A029 3', mRNA sequence
Length = 753
Score = 40.0 bits (81), Expect = 0.021
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
G++A+VTGG SGIG A RG V + + E+G V + K+N
Sbjct: 569 GLTAIVTGGTSGIGTETVRVLALRGARVIMPARNMESGHRVKEAILKDN 423
>gb|DR694371.1|DR694371 EST1084463 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEB59 3' end, mRNA sequence
Length = 862
Score = 34.5 bits (69), Expect(2) = 0.022
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKE 367
A+VTG GIG + A++GL + + + G+EV +Q E
Sbjct: 327 AVVTGSNKGIGHEIVRQLAKQGLTIVLTSRDQVRGQEVVASLQTE 461
Score = 23.1 bits (44), Expect(2) = 0.022
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2 / +3
Query: 470 QTYNGLDICINCAGI 514
+ Y G+DI +N AG+
Sbjct: 537 EQYGGIDILVNNAGV 581
>gb|DR089679.1|DR089679 RTAL1_10_E01.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_10_E01_A029 3', mRNA sequence
Length = 859
Score = 33.1 bits (66), Expect(2) = 0.022
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2 / -1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVD 319
++TGGASG+G+ L A R + V V+D
Sbjct: 487 VITGGASGVGELLANTLAVRNITVVVLD 404
Score = 24.4 bits (47), Expect(2) = 0.022
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +2 / -1
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYD 538
+ +CDVS+ + + + ++ I +N AGI L+ D
Sbjct: 367 YYECDVSDWEQVKTVAKAVIEEVGQPTILVNNAGIVQGKLLLD 239
>gb|DT638520.1|DT638520 EST1153451 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHG18 3' end, mRNA sequence
Length = 836
Score = 34.5 bits (69), Expect(2) = 0.022
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKE 367
A+VTG GIG + A++GL + + + G+EV +Q E
Sbjct: 335 AVVTGSNKGIGHEIVRQLAKQGLTIVLTSRDQVRGQEVVASLQTE 469
Score = 23.1 bits (44), Expect(2) = 0.022
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2 / +2
Query: 470 QTYNGLDICINCAGI 514
+ Y G+DI +N AG+
Sbjct: 545 EQYGGIDILVNNAGV 589
Database: Pinus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:25 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 370,321,183
Number of Sequences: 355925
Number of extensions: 4671502
Number of successful extensions: 36383
Number of sequences better than 10.0: 508
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 11646211320
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)