TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAS2h09.yg.3.5
(1992 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR050898.1|DR050898 RTBOR1_26_H05.b1_A029 Roots plus add... 304 1e-081
gb|BQ290999.1|BQ290999 NXRV054_D07_F NXRV (Nsf Xylem Root w... 285 9e-076
gb|BQ634727.1|BQ634727 NXRV072_E09_F NXRV (Nsf Xylem Root w... 284 2e-075
gb|DR071883.1|DR071883 RTDK1_22_E02.g1_A029 Roots, dark Pin... 252 6e-066
gb|AY356372.1| Pinus taeda R2R3-MYB transcription factor (M... 252 8e-066
gb|BX784172.1|BX784172 BX784172 Pinus pinaster differenciat... 237 3e-061
gb|DR685654.1|DR685654 EST1075731 Normalized pine embryo li... 236 5e-061
gb|AY356371.1| Pinus taeda R2R3-MYB transcription factor (M... 233 3e-060
gb|CX650454.1|CX650454 COLD1_45_F10.g1_A029 Root cold Pinus... 233 4e-060
gb|DR024153.1|DR024153 STRS1_62_E05.g1_A034 Shoot tip pitch... 233 4e-060
gb|CF388213.1|CF388213 RTDR2_1_B07.g1_A021 Loblolly pine ro... 232 7e-060
gb|DR694473.1|DR694473 EST1084565 Normalized pine embryo li... 232 7e-060
gb|DT638742.1|DT638742 EST1153673 Normalized pine embryo li... 232 7e-060
gb|DR161095.1|DR161095 RTFE1_9_G03.g1_A029 Roots minus iron... 232 9e-060
gb|DR744198.1|DR744198 RTCU1_20_G08.g1_A029 Roots plus adde... 232 9e-060
gb|CF387084.1|CF387084 RTDR1_10_E10.g1_A015 Loblolly pine r... 231 1e-059
gb|DR060728.1|DR060728 RTNIT1_29_D06.g1_A029 Roots minus ni... 230 2e-059
gb|DR111301.1|DR111301 RTS1_16_F03.g1_A029 Roots minus sulf... 229 6e-059
gb|DR117116.1|DR117116 RTMG1_4_G10.g1_A029 Roots minus magn... 229 6e-059
gb|BX681391.1|BX681391 BX681391 RS Pinus pinaster cDNA clon... 228 9e-059
gb|BF517838.1|BF517838 NXSI_027_G09_F NXSI (Nsf Xylem Side ... 228 1e-058
gb|CO200901.1|CO200901 RTCNT2_2_G06.b1_A029 Root control 2 ... 228 1e-058
gb|DR161238.1|DR161238 RTFE1_10_D10.g1_A029 Roots minus iro... 226 3e-058
gb|AW011253.1|AW011253 ST18F02 Pine TriplEx shoot tip libra... 225 1e-057
gb|CF393225.1|CF393225 RTDR3_17_D12.g1_A022 Loblolly pine r... 225 1e-057
gb|CO367178.1|CO367178 RTK1_32_E03.g1_A029 Roots minus pota... 224 1e-057
gb|CF472757.1|CF472757 RTDS1_11_D09.g1_A015 Drought-stresse... 222 7e-057
gb|DR023090.1|DR023090 STRS1_55_A05.g1_A034 Shoot tip pitch... 222 7e-057
gb|DR161451.1|DR161451 RTFE1_11_H03.g1_A029 Roots minus iro... 222 7e-057
gb|CF388652.1|CF388652 RTDR2_4_A10.g1_A021 Loblolly pine ro... 221 1e-056
gb|DR111427.1|DR111427 RTS1_17_F02.g1_A029 Roots minus sulf... 221 1e-056
gb|DR387774.1|DR387774 RTHG1_24_B11.b1_A029 Roots plus adde... 221 1e-056
gb|DR694707.1|DR694707 EST1084799 Normalized pine embryo li... 221 1e-056
gb|DT638995.1|DT638995 EST1153926 Normalized pine embryo li... 221 1e-056
gb|DR011035.1|DR011035 HEAT1_3_A03.b1_A029 Root at 37 C for... 221 1e-056
gb|DR387764.1|DR387764 RTHG1_24_A11.b1_A029 Roots plus adde... 221 1e-056
gb|CV034082.1|CV034082 RTNACL1_38_B11.g1_A029 Roots plus ad... 221 2e-056
gb|DR164052.1|DR164052 RTFE1_46_B11.g1_A029 Roots minus iro... 219 7e-056
gb|DR168212.1|DR168212 RTPHOS1_23_H12.g1_A029 Roots minus p... 218 9e-056
gb|DR014768.1|DR014768 HEAT1_51_B07.g1_A029 Root at 37 C fo... 217 2e-055
gb|DR111240.1|DR111240 RTS1_16_G05.b1_A029 Roots minus sulf... 216 3e-055
gb|DR099337.1|DR099337 STRR1_54_G08.g1_A033 Stem Response R... 216 5e-055
gb|CF391376.1|CF391376 RTDR3_1_G04.g1_A022 Loblolly pine ro... 215 6e-055
gb|CF401736.1|CF401736 RTWW1_14_C05.g1_A015 Well-watered lo... 214 2e-054
gb|CF669490.1|CF669490 RTCNT1_44_A10.b1_A029 Root control P... 214 2e-054
gb|DR178268.1|DR178268 RTMNUT1_10_C01.g1_A029 Roots minus m... 214 2e-054
gb|CF667045.1|CF667045 RTCNT1_27_G11.g1_A029 Root control P... 214 2e-054
gb|CF667523.1|CF667523 RTCNT1_30_H07.g1_A029 Root control P... 214 2e-054
gb|BX679906.1|BX679906 BX679906 RS Pinus pinaster cDNA clon... 214 2e-054
gb|CO198121.1|CO198121 GEO1_11_A02.g1_A029 Root gravitropis... 214 2e-054
gb|CO361397.1|CO361397 NDL2_4_D03.g1_A029 Needles control 2... 214 2e-054
gb|BQ701670.1|BQ701670 NXSI_118_C02_F NXSI (Nsf Xylem Side ... 213 3e-054
gb|CF477905.1|CF477905 RTWW3_13_C03.g1_A022 Well-watered lo... 213 4e-054
gb|CO361899.1|CO361899 NDL2_7_G04.g1_A029 Needles control 2... 213 4e-054
gb|CO361315.1|CO361315 NDL2_4_D03.b1_A029 Needles control 2... 211 1e-053
gb|CO365658.1|CO365658 RTK1_18_A01.g1_A029 Roots minus pota... 211 1e-053
gb|BX680288.1|BX680288 BX680288 RS Pinus pinaster cDNA clon... 209 7e-053
gb|DR014691.1|DR014691 HEAT1_51_B07.b1_A029 Root at 37 C fo... 209 7e-053
gb|DR017658.1|DR017658 STRS1_17_E03.g1_A034 Shoot tip pitch... 209 7e-053
gb|CO366297.1|CO366297 RTK1_27_B09.b1_A029 Roots minus pota... 208 1e-052
gb|CF470618.1|CF470618 RTDS1_13_H10.g1_A015 Drought-stresse... 206 4e-052
gb|DR057958.1|DR057958 RTNIT1_8_G05.g1_A029 Roots minus nit... 206 5e-052
gb|DR167765.1|DR167765 RTPHOS1_20_H05.g1_A029 Roots minus p... 205 7e-052
gb|CF396041.1|CF396041 RTDS2_20_C12.g1_A021 Drought-stresse... 205 9e-052
gb|CX648418.1|CX648418 COLD1_28_B12.g1_A029 Root cold Pinus... 204 2e-051
gb|DR014928.1|DR014928 HEAT1_52_A11.g1_A029 Root at 37 C fo... 204 2e-051
gb|DR079932.1|DR079932 RTFEPL1_18_F11.g1_A029 Roots plus ad... 204 2e-051
gb|DR683171.1|DR683171 EST1073247 Normalized pine embryo li... 203 3e-051
gb|DR683172.1|DR683172 EST1073248 Normalized pine embryo li... 203 3e-051
gb|DT631296.1|DT631296 EST1146227 Normalized pine embryo li... 203 3e-051
gb|CX646616.1|CX646616 COLD1_10_A05.g1_A029 Root cold Pinus... 203 5e-051
gb|CF671993.1|CF671993 RTCNT1_60_D02.g1_A029 Root control P... 200 2e-050
gb|CF402623.1|CF402623 RTWW1_21_B11.g1_A015 Well-watered lo... 200 3e-050
gb|AW064634.1|AW064634 ST33H05 Pine TriplEx shoot tip libra... 198 1e-049
gb|CF389081.1|CF389081 RTDR2_13_A10.g1_A021 Loblolly pine r... 196 4e-049
gb|CO158547.1|CO158547 FLD1_7_D03.g1_A029 Root flooded Pinu... 196 5e-049
gb|CO172303.1|CO172303 NDL1_28_G10.g1_A029 Needles control ... 196 5e-049
gb|CX647457.1|CX647457 COLD1_16_B04.g1_A029 Root cold Pinus... 195 7e-049
gb|DR167401.1|DR167401 RTPHOS1_18_C09.g1_A029 Roots minus p... 195 1e-048
gb|CF395899.1|CF395899 RTDS2_19_G06.g1_A021 Drought-stresse... 194 2e-048
gb|CO162972.1|CO162972 FLD1_38_D09.g1_A029 Root flooded Pin... 193 4e-048
gb|CF397637.1|CF397637 RTDS3_4_A07.g1_A022 Drought-stressed... 192 9e-048
gb|DR384384.1|DR384384 RTHG1_1_H06.g1_A029 Roots plus added... 192 9e-048
gb|DR384689.1|DR384689 RTHG1_3_H06.g1_A029 Roots plus added... 192 9e-048
gb|CO163969.1|CO163969 FLD1_45_A11.b1_A029 Root flooded Pin... 191 2e-047
gb|DR163874.1|DR163874 RTFE1_45_A12.g1_A029 Roots minus iro... 190 2e-047
gb|DR694940.1|DR694940 EST1085033 Normalized pine embryo li... 190 2e-047
gb|DT639133.1|DT639133 EST1154064 Normalized pine embryo li... 190 2e-047
gb|DR110104.1|DR110104 RTS1_8_C03.g1_A029 Roots minus sulfu... 189 5e-047
gb|CF391408.1|CF391408 RTDR3_1_E10.g1_A022 Loblolly pine ro... 189 6e-047
gb|CF394327.1|CF394327 RTDS2_4_B08.g1_A021 Drought-stressed... 189 6e-047
gb|CF395727.1|CF395727 RTDS2_16_B07.g1_A021 Drought-stresse... 189 6e-047
gb|CF400460.1|CF400460 RTWW1_5_H12.g1_A015 Well-watered lob... 189 6e-047
gb|CV034623.1|CV034623 RTNACL1_10_A11.g1_A029 Roots plus ad... 188 9e-047
gb|CF397272.1|CF397272 RTDS3_2_C01.g1_A022 Drought-stressed... 188 1e-046
gb|CF668816.1|CF668816 RTCNT1_38_G11.g1_A029 Root control P... 188 1e-046
gb|DR117421.1|DR117421 RTMG1_6_G12.g1_A029 Roots minus magn... 188 1e-046
gb|DR058733.1|DR058733 RTNIT1_13_C07.g1_A029 Roots minus ni... 188 2e-046
gb|AW065119.1|AW065119 ST39H05 Pine TriplEx shoot tip libra... 187 2e-046
gb|DR052727.1|DR052727 RTCA1_6_B03.g1_A029 Roots minus calc... 186 4e-046
gb|DR020720.1|DR020720 STRS1_38_G12.g1_A034 Shoot tip pitch... 186 6e-046
gb|CF399612.1|CF399612 RTDS3_26_H01.g1_A022 Drought-stresse... 185 8e-046
gb|DR098778.1|DR098778 STRR1_47_G01.g1_A033 Stem Response R... 185 1e-045
gb|CF396247.1|CF396247 RTDS2_15_B11.g1_A021 Drought-stresse... 121 1e-045
gb|DR015810.1|DR015810 STRS1_5_F07.g1_A034 Shoot tip pitch ... 150 5e-045
gb|CO176256.1|CO176256 NDL1_60_G12.g1_A029 Needles control ... 182 7e-045
gb|CF667292.1|CF667292 RTCNT1_29_G02.b1_A029 Root control P... 182 1e-044
gb|CO162411.1|CO162411 FLD1_35_D02.b1_A029 Root flooded Pin... 182 1e-044
gb|CO201585.1|CO201585 RTCNT2_6_F07.g1_A029 Root control 2 ... 181 2e-044
gb|BF609979.1|BF609979 NXSI_053_C11_F NXSI (Nsf Xylem Side ... 180 3e-044
gb|DR051127.1|DR051127 RTBOR1_27_G08.g1_A029 Roots plus add... 180 3e-044
gb|DT633408.1|DT633408 EST1148339 Normalized pine embryo li... 145 3e-044
gb|DR686505.1|DR686505 EST1076583 Normalized pine embryo li... 145 3e-044
gb|CF385274.1|CF385274 RTDR1_2_D01.g1_A015 Loblolly pine ro... 179 5e-044
gb|DT633531.1|DT633531 EST1148462 Normalized pine embryo li... 147 6e-044
gb|DR686108.1|DR686108 EST1076186 Normalized pine embryo li... 147 6e-044
gb|DR744906.1|DR744906 RTCU1_25_E06.g1_A029 Roots plus adde... 147 6e-044
gb|AW065064.1|AW065064 ST39B10 Pine TriplEx shoot tip libra... 179 7e-044
gb|CF475091.1|CF475091 RTWW2_5_F10.g1_A021 Well-watered lob... 144 4e-043
gb|CO368386.1|CO368386 RTK1_40_G08.b1_A029 Roots minus pota... 176 6e-043
gb|DR081462.1|DR081462 RTFEPL1_29_G04.g1_A029 Roots plus ad... 176 6e-043
gb|DR015700.1|DR015700 STRS1_5_D02.b1_A034 Shoot tip pitch ... 175 1e-042
gb|CO170303.1|CO170303 NDL1_13_D05.b1_A029 Needles control ... 151 1e-042
gb|DR179654.1|DR179654 RTMNUT1_23_B05.g2_A029 Roots minus m... 167 1e-042
gb|CO368639.1|CO368639 RTK1_41_H02.g1_A029 Roots minus pota... 142 2e-042
gb|DR683147.1|DR683147 EST1073223 Normalized pine embryo li... 172 8e-042
gb|DT631233.1|DT631233 EST1146164 Normalized pine embryo li... 172 8e-042
gb|CO362169.1|CO362169 RTK1_1_F07.g1_A029 Roots minus potas... 171 1e-041
gb|DR059561.1|DR059561 RTNIT1_18_A02.g1_A029 Roots minus ni... 171 2e-041
gb|DT632905.1|DT632905 EST1147836 Normalized pine embryo li... 171 2e-041
gb|BG319376.1|BG319376 NXPV_027_C05_F NXPV (Nsf Xylem Plani... 170 3e-041
gb|BX678005.1|BX678005 BX678005 RN Pinus pinaster cDNA clon... 170 4e-041
gb|CN852309.1|CN852309 Pi148-1 Salicylate-treated slash pin... 168 1e-040
gb|DR101609.1|DR101609 STRR1_74_C02.g1_A033 Stem Response R... 167 3e-040
gb|CF390133.1|CF390133 RTDR2_12_C07.g1_A021 Loblolly pine r... 97 3e-040
gb|DR015783.1|DR015783 STRS1_5_D02.g1_A034 Shoot tip pitch ... 166 5e-040
gb|CF391868.1|CF391868 RTDR3_10_B04.g1_A022 Loblolly pine r... 166 7e-040
gb|DR069928.1|DR069928 RTDK1_10_F06.b1_A029 Roots, dark Pin... 166 7e-040
gb|DR072123.1|DR072123 RTDK1_24_F01.b1_A029 Roots, dark Pin... 166 7e-040
gb|DR094442.1|DR094442 STRR1_14_D03.g1_A033 Stem Response R... 166 7e-040
gb|CF401126.1|CF401126 RTWW1_10_H02.b1_A015 Well-watered lo... 165 9e-040
gb|DR055413.1|DR055413 RTCA1_23_C03.g2_A029 Roots minus cal... 138 1e-039
gb|CO173370.1|CO173370 NDL1_35_F03.g1_A029 Needles control ... 164 2e-039
gb|DR386238.1|DR386238 RTHG1_13_G03.g1_A029 Roots plus adde... 163 3e-039
gb|DR111182.1|DR111182 RTS1_16_A02.b1_A029 Roots minus sulf... 161 1e-038
gb|BQ654804.1|BQ654804 NXRV085_H06_F NXRV (Nsf Xylem Root w... 161 2e-038
gb|CF393224.1|CF393224 RTDR3_17_B01.g1_A022 Loblolly pine r... 160 4e-038
gb|CV033497.1|CV033497 RTNACL1_34_H05.g1_A029 Roots plus ad... 160 4e-038
gb|DR089238.1|DR089238 RTAL1_7_A05.g1_A029 Roots plus added... 160 4e-038
gb|DR384837.1|DR384837 RTHG1_4_H08.g1_A029 Roots plus added... 160 4e-038
gb|CF663690.1|CF663690 RTCNT1_4_C02.g1_A029 Root control Pi... 159 6e-038
gb|CV034962.1|CV034962 RTNACL1_12_F05.g1_A029 Roots plus ad... 159 6e-038
gb|CX714163.1|CX714163 RTPQ1_18_D03.g1_A032 Roots treated w... 159 6e-038
gb|CO164542.1|CO164542 FLD1_48_E08.g1_A029 Root flooded Pin... 155 7e-037
gb|DR101544.1|DR101544 STRR1_74_C02.b1_A033 Stem Response R... 154 3e-036
gb|CF396536.1|CF396536 RTDS2_22_H07.g1_A021 Drought-stresse... 141 4e-036
gb|CO173249.1|CO173249 NDL1_35_A08.b1_A029 Needles control ... 153 5e-036
gb|BE520012.1|BE520012 NXCI_028_B03_F NXCI (Nsf Xylem Compr... 152 7e-036
gb|CV035967.1|CV035967 RTNACL1_43_E10.g1_A029 Roots plus ad... 150 2e-035
gb|CX651169.1|CX651169 COLD1_50_D03.g1_A029 Root cold Pinus... 150 3e-035
gb|DR690028.1|DR690028 EST1080114 Normalized pine embryo li... 111 3e-034
gb|DT635793.1|DT635793 EST1150724 Normalized pine embryo li... 111 3e-034
gb|DR746217.1|DR746217 RTCU1_35_B06.g1_A029 Roots plus adde... 145 1e-033
gb|CO173319.1|CO173319 NDL1_35_A08.g1_A029 Needles control ... 138 1e-031
gb|CO361388.1|CO361388 NDL2_4_C06.g1_A029 Needles control 2... 135 2e-031
gb|DR079868.1|DR079868 RTFEPL1_18_F11.b1_A029 Roots plus ad... 138 2e-031
gb|DR167833.1|DR167833 RTPHOS1_21_A06.g1_A029 Roots minus p... 138 2e-031
gb|CO362724.1|CO362724 RTK1_5_A02.g1_A029 Roots minus potas... 113 7e-030
gb|DR167893.1|DR167893 RTPHOS1_21_G02.g1_A029 Roots minus p... 131 1e-029
gb|DR020641.1|DR020641 STRS1_38_G12.b1_A034 Shoot tip pitch... 129 5e-029
gb|BX250447.1|BX250447 BX250447 Pinus pinaster differenciat... 129 7e-029
gb|CF672338.1|CF672338 RTCNT1_62_H04.g1_A029 Root control P... 87 1e-026
gb|CF387233.1|CF387233 RTDR1_11_B07.g1_A015 Loblolly pine r... 121 2e-026
gb|CF392063.1|CF392063 RTDR3_12_C02.g1_A022 Loblolly pine r... 85 5e-026
gb|DR096412.1|DR096412 STRR1_27_G02.g1_A033 Stem Response R... 117 2e-025
gb|DR117678.1|DR117678 RTMG1_8_A10.g1_A029 Roots minus magn... 115 1e-024
gb|DR117679.1|DR117679 RTMG1_8_A11.g1_A029 Roots minus magn... 115 1e-024
gb|DR109956.1|DR109956 RTS1_1_B02.b1_A029 Roots minus sulfu... 113 4e-024
gb|CF665728.1|CF665728 RTCNT1_18_C05.b1_A029 Root control P... 113 5e-024
gb|DR017577.1|DR017577 STRS1_17_E03.b1_A034 Shoot tip pitch... 111 2e-023
gb|DR050127.1|DR050127 RTBOR1_21_A09.g1_A029 Roots plus add... 95 2e-023
gb|DR013838.1|DR013838 HEAT1_21_G09.g1_A029 Root at 37 C fo... 95 2e-023
gb|DR024798.1|DR024798 STRS1_67_B12.g1_A034 Shoot tip pitch... 95 2e-023
gb|DR089099.1|DR089099 RTAL1_6_B11.g1_A029 Roots plus added... 95 2e-023
gb|CO364221.1|CO364221 RTK1_14_A05.g1_A029 Roots minus pota... 95 2e-023
gb|CV139163.1|CV139163 EST850372 Sequencing ESTs from loblo... 95 2e-023
gb|DR024941.1|DR024941 STRS1_68_B11.g1_A034 Shoot tip pitch... 95 2e-023
gb|DT626587.1|DT626587 EST1158511 Sequencing ESTs from lobl... 95 2e-023
gb|CF669684.1|CF669684 RTCNT1_45_A07.g1_A029 Root control P... 95 2e-023
gb|CF386912.1|CF386912 RTDR1_9_D07.g1_A015 Loblolly pine ro... 95 2e-023
gb|DR059765.1|DR059765 RTNIT1_19_D08.g1_A029 Roots minus ni... 110 3e-023
gb|DN448288.1|DN448288 EST944087 Sequencing ESTs from loblo... 92 5e-023
gb|DT625580.1|DT625580 EST1157504 Sequencing ESTs from lobl... 92 5e-023
gb|CN783759.1|CN783759 EST782450 Sequencing ESTs from loblo... 92 5e-023
gb|CV138259.1|CV138259 EST849468 Sequencing ESTs from loblo... 92 5e-023
gb|DT624539.1|DT624539 EST1158826 Sequencing ESTs from lobl... 92 5e-023
gb|DN458982.1|DN458982 EST954781 Sequencing ESTs from loblo... 94 6e-023
gb|CN783895.1|CN783895 EST782586 Sequencing ESTs from loblo... 94 6e-023
gb|DN464734.1|DN464734 EST960533 Sequencing ESTs from loblo... 94 6e-023
gb|DN455288.1|DN455288 EST951087 Sequencing ESTs from loblo... 94 6e-023
gb|CV135175.1|CV135175 EST846384 Sequencing ESTs from loblo... 94 6e-023
gb|DN463709.1|DN463709 EST959508 Sequencing ESTs from loblo... 94 6e-023
gb|DT626735.1|DT626735 EST1159811 Sequencing ESTs from lobl... 94 6e-023
gb|CO412408.1|CO412408 EST842793 Sequencing ESTs from loblo... 94 6e-023
gb|DN452317.1|DN452317 EST948116 Sequencing ESTs from loblo... 94 6e-023
gb|CV136199.1|CV136199 EST847408 Sequencing ESTs from loblo... 94 6e-023
gb|DN447482.1|DN447482 EST943281 Sequencing ESTs from loblo... 94 6e-023
gb|DN456471.1|DN456471 EST952270 Sequencing ESTs from loblo... 94 6e-023
gb|CO411548.1|CO411548 EST841933 Sequencing ESTs from loblo... 94 6e-023
gb|CO414624.1|CO414624 EST845009 Sequencing ESTs from loblo... 94 6e-023
gb|CD022618.1|CD022618 NXPV_071_H11_F NXPV (Nsf Xylem Plani... 108 2e-022
gb|CO367106.1|CO367106 RTK1_32_E03.b1_A029 Roots minus pota... 108 2e-022
gb|CV033833.1|CV033833 RTNACL1_36_H06.g1_A029 Roots plus ad... 106 4e-022
gb|DR112102.1|DR112102 RTS1_25_H07.g1_A029 Roots minus sulf... 106 4e-022
gb|CO162486.1|CO162486 FLD1_35_D02.g1_A029 Root flooded Pin... 105 8e-022
gb|BE241255.1|BE241255 NXNV_183_D12_F Nsf Xylem Normal wood... 104 3e-021
gb|DR015297.1|DR015297 STRS1_2_D10.g1_A034 Shoot tip pitch ... 103 4e-021
gb|CX648339.1|CX648339 COLD1_28_B12.b1_A029 Root cold Pinus... 102 7e-021
gb|DR120088.1|DR120088 RTMG1_27_A10.g2_A029 Roots minus mag... 100 3e-020
gb|DR100867.1|DR100867 STRR1_68_H01.g1_A033 Stem Response R... 100 4e-020
gb|CF403056.1|CF403056 RTWW1_24_G08.g1_A015 Well-watered lo... 98 2e-019
gb|DR098178.1|DR098178 STRR1_39_D04.g1_A033 Stem Response R... 98 2e-019
gb|CF395399.1|CF395399 RTDS2_11_H08.g1_A021 Drought-stresse... 96 6e-019
gb|BQ701199.1|BQ701199 NXSI_023_G01_F NXSI (Nsf Xylem Side ... 90 7e-019
gb|CO361758.1|CO361758 NDL2_6_H01.g1_A029 Needles control 2... 78 9e-019
gb|CF672556.1|CF672556 RTCNT1_64_A03.g1_A029 Root control P... 95 1e-018
gb|CO366361.1|CO366361 RTK1_27_A03.g1_A029 Roots minus pota... 95 1e-018
gb|DT627526.1|DT627526 EST1160602 Sequencing ESTs from lobl... 94 4e-018
gb|BE644136.1|BE644136 NXCI_054_H06_F NXCI (Nsf Xylem Compr... 93 6e-018
gb|CD020726.1|CD020726 NXNV_088_G08_F Nsf Xylem Normal wood... 93 8e-018
gb|CF470298.1|CF470298 RTDS1_18_B11.g1_A015 Drought-stresse... 69 9e-018
gb|BQ654678.1|BQ654678 NXRV084_C01_F NXRV (Nsf Xylem Root w... 92 1e-017
gb|DR094280.1|DR094280 STRR1_13_C10.g1_A033 Stem Response R... 91 3e-017
gb|DR120873.1|DR120873 RTMG1_32_B08.g1_A029 Roots minus mag... 91 3e-017
gb|DR167601.1|DR167601 RTPHOS1_19_G10.g1_A029 Roots minus p... 91 3e-017
gb|DR177927.1|DR177927 RTMNUT1_8_E11.b1_A029 Roots minus mi... 91 3e-017
gb|DR080000.1|DR080000 RTFEPL1_19_A02.g1_A029 Roots plus ad... 90 4e-017
gb|BF610487.1|BF610487 NXSI_059_A09_F NXSI (Nsf Xylem Side ... 83 1e-016
gb|CO165016.1|CO165016 FLD1_51_F09.g1_A029 Root flooded Pin... 89 1e-016
gb|DR386158.1|DR386158 RTHG1_13_G03.b1_A029 Roots plus adde... 89 1e-016
gb|BG319341.1|BG319341 NXPV_026_G12_F NXPV (Nsf Xylem Plani... 80 2e-016
gb|BX000680.1|BX000680 BX000680 Pinus pinaster xylem Pinus ... 86 7e-016
gb|CO164694.1|CO164694 FLD1_49_E04.g1_A029 Root flooded Pin... 86 9e-016
gb|CX646566.1|CX646566 COLD1_10_D06.b1_A029 Root cold Pinus... 85 1e-015
gb|CF398623.1|CF398623 RTDS3_13_E02.b1_A022 Drought-stresse... 84 2e-015
gb|CF474496.1|CF474496 RTWW2_9_D02.b1_A021 Well-watered lob... 84 2e-015
gb|DR692411.1|DR692411 EST1082499 Normalized pine embryo li... 84 5e-015
gb|DT637439.1|DT637439 EST1152370 Normalized pine embryo li... 84 5e-015
gb|CV034016.1|CV034016 RTNACL1_38_B11.b1_A029 Roots plus ad... 83 9e-015
gb|DR016585.1|DR016585 STRS1_11_A12.b1_A034 Shoot tip pitch... 70 1e-014
gb|CO367346.1|CO367346 RTK1_33_F05.g1_A029 Roots minus pota... 80 6e-014
gb|DR057870.1|DR057870 RTNIT1_8_G05.b1_A029 Roots minus nit... 80 6e-014
gb|DR016667.1|DR016667 STRS1_11_A12.g1_A034 Shoot tip pitch... 70 2e-013
gb|CO361678.1|CO361678 NDL2_6_H01.b1_A029 Needles control 2... 78 3e-013
gb|AI725044.1|AI725044 943 PtIFG2 Pinus taeda cDNA clone 88... 76 1e-012
gb|CF478238.1|CF478238 RTWW3_19_H07.g1_A022 Well-watered lo... 75 1e-012
gb|CO175228.1|CO175228 NDL1_53_H05.b1_A029 Needles control ... 75 1e-012
gb|DR052207.1|DR052207 RTCA1_3_C09.b1_A029 Roots minus calc... 54 2e-012
gb|DN463162.1|DN463162 EST958961 Sequencing ESTs from loblo... 75 2e-012
gb|AL750878.1|AL750878 AL750878 RS Pinus pinaster cDNA clon... 57 4e-012
gb|DR023047.1|DR023047 STRS1_55_D09.b1_A034 Shoot tip pitch... 73 7e-012
gb|CF395696.1|CF395696 RTDS2_16_F12.g1_A021 Drought-stresse... 72 1e-011
gb|CF663743.1|CF663743 RTCNT1_4_H05.g1_A029 Root control Pi... 72 2e-011
gb|CF393923.1|CF393923 RTDS2_2_G07.b1_A021 Drought-stressed... 70 5e-011
gb|CO200971.1|CO200971 RTCNT2_2_F10.g1_A029 Root control 2 ... 70 5e-011
gb|CX646534.1|CX646534 COLD1_10_A05.b1_A029 Root cold Pinus... 68 2e-010
gb|DR016135.1|DR016135 STRS1_7_H08.g1_A034 Shoot tip pitch ... 53 4e-010
gb|CF396127.1|CF396127 RTDS2_13_D06.g1_A021 Drought-stresse... 65 1e-009
gb|DR096185.1|DR096185 STRR1_26_G11.b1_A033 Stem Response R... 65 2e-009
gb|CD025338.1|CD025338 NXSI_044_F04_F NXSI (Nsf Xylem Side ... 64 3e-009
gb|CF470509.1|CF470509 RTDS1_13_H10.b1_A015 Drought-stresse... 64 3e-009
gb|CF476017.1|CF476017 RTWW2_16_B11.g1_A021 Well-watered lo... 63 5e-009
gb|DR099264.1|DR099264 STRR1_54_G08.b1_A033 Stem Response R... 63 5e-009
gb|BX680071.1|BX680071 BX680071 RS Pinus pinaster cDNA clon... 63 7e-009
gb|DR011876.1|DR011876 HEAT1_8_B02.g1_A029 Root at 37 C for... 63 7e-009
gb|DR015213.1|DR015213 STRS1_2_D10.b1_A034 Shoot tip pitch ... 63 7e-009
gb|DR101912.1|DR101912 STRR1_76_E01.g1_A033 Stem Response R... 62 1e-008
gb|DR014845.1|DR014845 HEAT1_52_A11.b1_A029 Root at 37 C fo... 62 2e-008
gb|BQ697390.1|BQ697390 NXPV_053_G01_F NXPV (Nsf Xylem Plani... 61 3e-008
gb|DR161362.1|DR161362 RTFE1_11_H03.b1_A029 Roots minus iro... 60 7e-008
gb|DR052135.1|DR052135 RTCA1_2_D08.g1_A029 Roots minus calc... 54 1e-007
gb|CF386859.1|CF386859 RTDR1_9_D11.b1_A015 Loblolly pine ro... 59 1e-007
gb|DR120011.1|DR120011 RTMG1_27_A10.b1_A029 Roots minus mag... 58 2e-007
gb|DR052278.1|DR052278 RTCA1_3_C09.g1_A029 Roots minus calc... 54 2e-007
gb|DR092612.1|DR092612 STRR1_2_B11.g1_A033 Stem Response Re... 57 6e-007
gb|DR117333.1|DR117333 RTMG1_6_G12.b1_A029 Roots minus magn... 57 6e-007
gb|BQ696771.1|BQ696771 NXPV_045_A10_F NXPV (Nsf Xylem Plani... 46 1e-006
gb|CX647021.1|CX647021 COLD1_13_A07.b1_A029 Root cold Pinus... 54 3e-006
gb|DR052055.1|DR052055 RTCA1_2_D08.b1_A029 Roots minus calc... 54 3e-006
gb|AL750032.1|AL750032 AL750032 AS Pinus pinaster cDNA clon... 53 6e-006
gb|AL750151.1|AL750151 AL750151 AS Pinus pinaster cDNA clon... 53 6e-006
gb|BX667586.1|BX667586 BX667586 RN Pinus pinaster cDNA clon... 51 4e-005
gb|DR052339.1|DR052339 RTCA1_4_B02.b1_A029 Roots minus calc... 40 5e-005
gb|BX679518.1|BX679518 BX679518 RS Pinus pinaster cDNA clon... 40 8e-005
gb|BE451890.1|BE451890 NXCI_004_G10_F NXCI (Nsf Xylem Compr... 49 1e-004
gb|BF186052.1|BF186052 NXCI_132_E09_F NXCI (Nsf Xylem Compr... 49 1e-004
gb|CD016573.1|CD016573 NXCI_051_A04_F NXCI (Nsf Xylem Compr... 49 1e-004
gb|CF398912.1|CF398912 RTDS3_11_F06.b1_A022 Drought-stresse... 48 2e-004
gb|CF477238.1|CF477238 RTWW3_6_E02.g1_A022 Well-watered lob... 47 4e-004
gb|BV079719.1| Pp_Pp2 Pinus pinaster megagametophytes Pinus... 47 4e-004
gb|BQ703169.1|BQ703169 NXSI_137_D03_F NXSI (Nsf Xylem Side ... 46 7e-004
gb|AW226481.1|AW226481 ST82H01 Pine TriplEx shoot tip libra... 46 0.001
gb|DN614363.1|DN614363 EST967413 Subtracted pine embryo lib... 44 0.003
gb|AW064812.1|AW064812 ST36A12 Pine TriplEx shoot tip libra... 44 0.005
gb|DN630652.1|DN630652 EST981468 Subtracted pine embryo lib... 44 0.005
gb|DT630347.1|DT630347 EST1154759 Subtracted pine embryo li... 44 0.005
gb|DR162691.1|DR162691 RTFE1_19_C08.g1_A029 Roots minus iro... 43 0.006
gb|AA556562.1|AA556562 417 Loblolly pine C Pinus taeda cDNA... 32 0.013
gb|DR686482.1|DR686482 EST1076560 Normalized pine embryo li... 41 0.031
gb|CV034559.1|CV034559 RTNACL1_10_A11.b1_A029 Roots plus ad... 40 0.058
gb|DR179574.1|DR179574 RTMNUT1_23_B05.b2_A029 Roots minus m... 40 0.079
gb|BF169447.1|BF169447 NXCI_121_F06_F NXCI (Nsf Xylem Compr... 39 0.15
gb|BF221125.1|BF221125 NXCI_163_F11_F NXCI (Nsf Xylem Compr... 39 0.15
gb|BF778142.1|BF778142 NXSI_077_F06_F NXSI (Nsf Xylem Side ... 39 0.15
gb|CO164762.1|CO164762 FLD1_50_D06.b1_A029 Root flooded Pin... 39 0.15
gb|CO164837.1|CO164837 FLD1_50_D06.g1_A029 Root flooded Pin... 39 0.15
gb|DN449894.1|DN449894 EST945693 Sequencing ESTs from loblo... 39 0.15
gb|DN457591.1|DN457591 EST953390 Sequencing ESTs from loblo... 39 0.15
gb|DN463736.1|DN463736 EST959535 Sequencing ESTs from loblo... 39 0.15
gb|DR054763.1|DR054763 RTCA1_19_A07.g1_A029 Roots minus cal... 39 0.15
gb|DR099228.1|DR099228 STRR1_54_C02.b1_A033 Stem Response R... 39 0.15
gb|DR099296.1|DR099296 STRR1_54_C02.g1_A033 Stem Response R... 39 0.15
gb|DT626558.1|DT626558 EST1158482 Sequencing ESTs from lobl... 39 0.15
gb|DT626751.1|DT626751 EST1159827 Sequencing ESTs from lobl... 39 0.15
gb|CF472904.1|CF472904 RTDS1_12_G03.g1_A015 Drought-stresse... 38 0.21
gb|DR054697.1|DR054697 RTCA1_19_A07.b1_A029 Roots minus cal... 38 0.21
gb|BF777458.1|BF777458 NXSI_071_G12_F NXSI (Nsf Xylem Side ... 36 0.73
gb|CD023829.1|CD023829 NXRV_010_G10_F NXRV (Nsf Xylem Root ... 36 0.73
gb|CF392981.1|CF392981 RTDR3_18_A12.b1_A022 Loblolly pine r... 36 0.73
gb|CF471801.1|CF471801 RTDS1_6_C04.g1_A015 Drought-stressed... 36 0.73
gb|DR111812.1|DR111812 RTS1_20_H10.b1_A029 Roots minus sulf... 36 1.0
gb|CO164623.1|CO164623 FLD1_49_F02.b1_A029 Root flooded Pin... 35 1.9
gb|CO164703.1|CO164703 FLD1_49_F02.g1_A029 Root flooded Pin... 35 1.9
gb|DR097752.1|DR097752 STRR1_36_F06.g3_A033 Stem Response R... 29 2.1
gb|DN608801.1|DN608801 EST961851 Subtracted pine embryo lib... 35 2.6
gb|DN609910.1|DN609910 EST962960 Subtracted pine embryo lib... 35 2.6
gb|AW010745.1|AW010745 ST11G12 Pine TriplEx shoot tip libra... 34 3.6
gb|BX250138.1|BX250138 BX250138 Pinus pinaster differenciat... 34 3.6
gb|CF470396.1|CF470396 RTDS1_17_E08.b1_A015 Drought-stresse... 34 3.6
gb|CF470479.1|CF470479 RTDS1_17_E08.g1_A015 Drought-stresse... 34 3.6
gb|CF667810.1|CF667810 RTCNT1_32_D11.g1_A029 Root control P... 34 3.6
gb|BX667557.1|BX667557 BX667557 RN Pinus pinaster cDNA clon... 34 3.6
gb|CN784965.1|CN784965 EST783656 Sequencing ESTs from loblo... 34 3.6
gb|CN785589.1|CN785589 EST784280 Sequencing ESTs from loblo... 34 3.6
gb|CO414400.1|CO414400 EST844785 Sequencing ESTs from loblo... 34 3.6
gb|CV134123.1|CV134123 EST845332 Sequencing ESTs from loblo... 34 3.6
gb|CV147023.1|CV147023 EST858232 Sequencing ESTs from loblo... 34 3.6
gb|CV147082.1|CV147082 EST858291 Sequencing ESTs from loblo... 34 3.6
gb|DN449116.1|DN449116 EST944915 Sequencing ESTs from loblo... 34 3.6
gb|DN453680.1|DN453680 EST949479 Sequencing ESTs from loblo... 34 3.6
gb|DN456735.1|DN456735 EST952534 Sequencing ESTs from loblo... 34 3.6
gb|DN458859.1|DN458859 EST954658 Sequencing ESTs from loblo... 34 3.6
gb|DN462138.1|DN462138 EST957937 Sequencing ESTs from loblo... 34 3.6
gb|DN463667.1|DN463667 EST959466 Sequencing ESTs from loblo... 34 3.6
gb|DN609187.1|DN609187 EST962237 Subtracted pine embryo lib... 34 3.6
gb|DN609683.1|DN609683 EST962733 Subtracted pine embryo lib... 34 3.6
gb|DN611833.1|DN611833 EST964883 Subtracted pine embryo lib... 34 3.6
gb|DN614968.1|DN614968 EST968018 Subtracted pine embryo lib... 34 3.6
gb|DR018748.1|DR018748 STRS1_25_A09.g1_A034 Shoot tip pitch... 34 3.6
gb|DR022022.1|DR022022 STRS1_48_H02.b1_A034 Shoot tip pitch... 34 3.6
gb|DR022102.1|DR022102 STRS1_48_H02.g1_A034 Shoot tip pitch... 34 3.6
gb|DR071897.1|DR071897 RTDK1_22_F07.g1_A029 Roots, dark Pin... 34 3.6
gb|DR095692.1|DR095692 STRR1_23_A07.b1_A033 Stem Response R... 34 3.6
gb|CF397183.1|CF397183 RTDS3_2_H10.b2_A022 Drought-stressed... 34 4.9
gb|BX678338.1|BX678338 BX678338 RN Pinus pinaster cDNA clon... 34 4.9
gb|CV135573.1|CV135573 EST846782 Sequencing ESTs from loblo... 34 4.9
gb|DN454568.1|DN454568 EST950367 Sequencing ESTs from loblo... 34 4.9
gb|DN457420.1|DN457420 EST953219 Sequencing ESTs from loblo... 34 4.9
gb|DN458548.1|DN458548 EST954347 Sequencing ESTs from loblo... 34 4.9
gb|DN461340.1|DN461340 EST957139 Sequencing ESTs from loblo... 34 4.9
gb|DN628751.1|DN628751 EST979567 Subtracted pine embryo lib... 34 4.9
gb|DN632216.1|DN632216 EST983032 Subtracted pine embryo lib... 34 4.9
gb|DT629899.1|DT629899 EST1154311 Subtracted pine embryo li... 34 4.9
gb|DT629914.1|DT629914 EST1154326 Subtracted pine embryo li... 34 4.9
gb|DT630385.1|DT630385 EST1154797 Subtracted pine embryo li... 34 4.9
gb|CD025405.1|CD025405 NXSI_051_D05_F NXSI (Nsf Xylem Side ... 25 5.7
gb|BM492278.1|BM492278 NXRV_024_B02_F NXRV (Nsf Xylem Root ... 33 6.8
gb|CF663568.1|CF663568 RTCNT1_3_F04.g1_A029 Root control Pi... 33 6.8
gb|CF669324.1|CF669324 RTCNT1_42_H09.b1_A029 Root control P... 33 6.8
gb|BX680795.1|BX680795 BX680795 RS Pinus pinaster cDNA clon... 33 6.8
gb|CX645699.1|CX645699 COLD1_4_F08.g1_A029 Root cold Pinus ... 33 6.8
gb|DR694695.1|DR694695 EST1084787 Normalized pine embryo li... 33 6.8
gb|DR180184.1|DR180184 RTMNUT1_27_B03.b1_A029 Roots minus m... 28 6.9
gb|CF393008.1|CF393008 RTDR3_18_A12.g1_A022 Loblolly pine r... 33 9.3
gb|DN448698.1|DN448698 EST944497 Sequencing ESTs from loblo... 33 9.3
gb|DR070780.1|DR070780 RTDK1_15_C03.g1_A029 Roots, dark Pin... 33 9.3
>gb|DR050898.1|DR050898 RTBOR1_26_H05.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_26_H05_A029 3', mRNA sequence
Length = 793
Score = 304 bits (658), Expect = 1e-081
Identities = 114/133 (85%), Positives = 125/133 (93%)
Frame = +3 / -2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGRHSCCYKQKLRKGLWSPEEDEKL+ HITK+GHGCWS+VPK AGLQRCGKSCRLRWINY
Sbjct: 699 MGRHSCCYKQKLRKGLWSPEEDEKLVRHITKYGHGCWSAVPKQAGLQRCGKSCRLRWINY 520
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F+ EE+LI+ELH+VLGNRWSQIA LPGRTDNEIKNLWNSCIKKKLRQ+G
Sbjct: 519 LRPDLKRGTFSPQEENLIVELHSVLGNRWSQIATHLPGRTDNEIKNLWNSCIKKKLRQRG 340
Query: 618 IDPNTHKPLTEAD 656
IDPNTH+PL+E +
Sbjct: 339 IDPNTHRPLSEVN 301
Score = 162 bits (348), Expect = 9e-039
Identities = 75/132 (56%), Positives = 79/132 (59%)
Frame = -3 / +2
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSW 470
S+ GL VLGSMP CLSFFLMHEF RFLISLSVLPG C AI*DHLFPRT C
Sbjct: 308 SLRGLCVLGSMPRCLSFFLMHEFQRFLISLSVLPGRCVAI*DHLFPRTECSSTMRFSSCG 487
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXX 290
N P RSGL+* IH SLQLFP PA GT LQ PWP V+
Sbjct: 488 ENVPRFRSGLK*LIHRSLQLFPQRWRPACFGTALQHPWPYLVIWRTSFSSSSGDHKPFLS 667
Query: 289 FCL*QQECLPIS 254
FCL*Q E PI+
Sbjct: 668 FCL*QHEWRPIT 703
Score = 149 bits (320), Expect = 6e-035
Identities = 66/136 (48%), Positives = 93/136 (68%)
Frame = -2 / +1
Query: 656 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 477
I L++ V V I A LP+LL +ARVP +LDL+IS Q+ C LRPPVPED +Q ++E+FF
Sbjct: 301 IHLAERPVRVRIYASLPKLLFNARVPEVLDLVISSSGQMCCYLRPPVPED*MQFNNEIFF 480
Query: 476 VLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
+ EC SL++W Q+V PP+P TL A L+ S + PA+MA+ + H+ LIL R P+ L
Sbjct: 481 LRRECASLQIWSQVVDPPKPATLPATLEASLLWHCTPASMAVFGNMAHQLLILFRRPQTL 660
Query: 296 SQLLLVAARMPPHLNA 249
+ L VAAR+ PH ++
Sbjct: 661 PEFLFVAARVAPHYSS 708
Score = 52.4 bits (108), Expect(2) = 3e-015
Identities = 27/46 (58%), Positives = 34/46 (73%)
Frame = +2 / -1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY*G 652
EQVVSN + +AR++** DQE +ELVH +EA A RH S H QA+ G
Sbjct: 442 EQVVSNSNTSARKN**RDQEPLELVH*KEA*ATRHRS*HAQASQRG 305
Score = 50.6 bits (104), Expect(2) = 3e-015
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +2 / -1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
+G +LLQ E ++G +V G*E + + PW+LE ++ W +R+EL A VD+L
Sbjct: 700 NGAPLVLLQTETQEGFVVSGRG*EAGAPYYQIRPWMLECSAKASWPPALREELQASVDQL 521
Query: 437 SE 442
E
Sbjct: 520 LE 515
Score = 42.8 bits (87), Expect(2) = 3e-007
Identities = 28/70 (40%), Positives = 34/70 (48%)
Frame = +1 / -3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WG AAT+R+ R G +RMR+ + AM AG + L A RV G GG T
Sbjct: 698 WGATRAATNRNSGRVCGLRKRMRSWCAILPNTAMDAGVQCQSKLASSVAGRVAGFGGSTT 519
Query: 439 *GQTSREGHS 468
* Q E HS
Sbjct: 518 *DQI*SEAHS 489
Score = 39.1 bits (79), Expect(2) = 0.020
Identities = 26/69 (37%), Positives = 30/69 (43%)
Frame = -1 / +3
Query: 465 MPLS*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSAS 286
M L+ L S S ST A NS R Q SS HG + SHP T P S
Sbjct: 492 MCLASDLVSSS*STEACNSSRNAGGQLALALHSSIHGRIW*YGAPASHPLPETTNPS*VS 671
Query: 285 ACSSKNASP 259
CSS + +P
Sbjct: 672 VCSSTSGAP 698
Score = 33.1 bits (66), Expect(2) = 3e-007
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = +1 / -3
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPT 636
Q C LI RSR GTRA +RS G +A I T T
Sbjct: 422 QHICPEELITRSRTSGTRALKRSLGNEA*ILTRT 321
Score = 24.0 bits (46), Expect(2) = 0.020
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1 / +3
Query: 660 RDQPQ*VACGCWDQCL 613
R P+* AC C D CL
Sbjct: 297 RHSPR*EACAC*DLCL 344
>gb|BQ290999.1|BQ290999 NXRV054_D07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV054_D07 5' similar to Arabidopsis thaliana
sequence At1g09540 putative transcription factor (MYB61)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 764
Score = 285 bits (616), Expect = 9e-076
Identities = 108/129 (83%), Positives = 116/129 (89%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGRHSCCYKQKLRKGLWSPEEDEKL+ HITK+GHGCWS+VPK AGLQRCGKSCRLRWINY
Sbjct: 320 MGRHSCCYKQKLRKGLWSPEEDEKLVRHITKYGHGCWSAVPKQAGLQRCGKSCRLRWINY 499
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F+ EE+LI+ELH+VLGNRWSQIA LPGRTDNEIKNLWNSCIK R +G
Sbjct: 500 LRPDLKRGTFSPQEENLIVELHSVLGNRWSQIATHLPGRTDNEIKNLWNSCIKXXXRXRG 679
Query: 618 IDPNTHKPL 644
ID NTH PL
Sbjct: 680 IDXNTHXPL 706
Score = 144 bits (310), Expect = 1e-033
Identities = 69/129 (53%), Positives = 72/129 (55%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G VL SMP L FLMHEF RFLISLSVLPG C AI*DHLFPRT C N
Sbjct: 702 GXCVLXSMPRXLXXFLMHEFQRFLISLSVLPGRCVAI*DHLFPRTECSSTMRFSSCGENV 523
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL 281
P RSGL+* IH SLQLFP PA GT LQ PWP V+ FCL
Sbjct: 522 PRFRSGLK*LIHRSLQLFPQRWRPACFGTALQHPWPYLVIWRTSFSSSSGDHKPFLSFCL 343
Query: 280 *QQECLPIS 254
*Q E PI+
Sbjct: 342 *QHEWRPIT 316
Score = 140 bits (300), Expect = 4e-032
Identities = 61/129 (47%), Positives = 85/129 (65%)
Frame = -2 / -2
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
V V I A P +ARVP +LDL+IS Q+ C LRPPVPED +Q ++E+FF+ EC S
Sbjct: 697 VRVXIYASXPXXXFNARVPEVLDLVISSSGQVCCYLRPPVPED*MQFNNEIFFLRRECAS 518
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVA 276
L++W Q+V PP+P TL A L+ S + PA+MA+ + H+ LIL R P+ L + L VA
Sbjct: 517 LQIWSQVVDPPKPATLPATLEASLLWHCTPASMAVFGNMAHQLLILFRRPQTLPEFLFVA 338
Query: 275 ARMPPHLNA 249
AR+ PH ++
Sbjct: 337 ARVAPHYSS 311
Score = 50.6 bits (104), Expect(2) = 1e-011
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
+G +LLQ E ++G +V G*E + + PW+LE ++ W +R+EL A VD+L
Sbjct: 319 NGAPLVLLQTETQEGFVVSGRG*EAGAPYYQIRPWMLECSAKASWPPALREELQASVDQL 498
Query: 437 SE 442
E
Sbjct: 499 LE 504
Score = 42.8 bits (87), Expect(2) = 2e-005
Identities = 28/70 (40%), Positives = 34/70 (48%)
Frame = +1 / +3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WG AAT+R+ R G +RMR+ + AM AG + L A RV G GG T
Sbjct: 321 WGATRAATNRNSGRVCGLRKRMRSWCAILPNTAMDAGVQCQSKLASSVAGRVAGFGGSTT 500
Query: 439 *GQTSREGHS 468
* Q E HS
Sbjct: 501 *DQI*SEAHS 530
Score = 40.0 bits (81), Expect(2) = 1e-011
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH 619
EQVVSN + AR++** DQE +ELVH + RH
Sbjct: 577 EQVVSNSNTPARKN**RDQEPLELVH*KXXXXTRH 681
Score = 39.1 bits (79), Expect = 0.11
Identities = 26/69 (37%), Positives = 30/69 (43%)
Frame = -1 / -1
Query: 465 MPLS*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSAS 286
M L+ L S S ST A NS R Q SS HG + SHP T P S
Sbjct: 527 MCLASDLVSSS*STEACNSSRNAGGQLALALHSSIHGRIW*YGAPASHPLPETTNPS*VS 348
Query: 285 ACSSKNASP 259
CSS + +P
Sbjct: 347 VCSSTSGAP 321
Score = 27.2 bits (53), Expect(2) = 2e-005
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +3
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKA 618
Q +C LI RSR GTRA + G +A
Sbjct: 597 QHTCPEELITRSRTSGTRALKXXXGXEA 680
>gb|BQ634727.1|BQ634727 NXRV072_E09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV072_E09 5' similar to Arabidopsis thaliana
sequence At1g09540 putative transcription factor (MYB61)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 742
Score = 284 bits (614), Expect = 2e-075
Identities = 108/129 (83%), Positives = 116/129 (89%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGRHSCCYKQKLRKGLWSPEEDEKL+ HITK+GHGCWS+VPK AGLQRCGKSCRLRWINY
Sbjct: 326 MGRHSCCYKQKLRKGLWSPEEDEKLVRHITKYGHGCWSAVPKQAGLQRCGKSCRLRWINY 505
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F+ E+LI+ELH+VLGNRWSQIA LPG TDNEIKNLWNSCIKKKLRQ+G
Sbjct: 506 LRPDLKRGTFSPXXENLIVELHSVLGNRWSQIATHLPGXTDNEIKNLWNSCIKKKLRQRG 685
Query: 618 IDPNTHKPL 644
NTH PL
Sbjct: 686 XXXNTHXPL 712
Score = 150 bits (322), Expect = 3e-035
Identities = 71/129 (55%), Positives = 74/129 (57%)
Frame = -3 / -2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G VL P CLSFFLMHEF RFLISLSVLPG C AI*DHLFPRT C N
Sbjct: 708 GXCVLXXXPRCLSFFLMHEFQRFLISLSVLPGRCVAI*DHLFPRTECSSTMRFSXXGENV 529
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL 281
P RSGL+* IH SLQLFP PA GT LQ PWP V+ FCL
Sbjct: 528 PRFRSGLK*LIHRSLQLFPQRWRPACFGTALQHPWPYLVIWRTSFSSSSGDHKPFLSFCL 349
Query: 280 *QQECLPIS 254
*Q E PI+
Sbjct: 348 *QHEWRPIT 322
Score = 139 bits (298), Expect = 7e-032
Identities = 62/136 (45%), Positives = 86/136 (63%)
Frame = -2 / -1
Query: 656 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 477
I + V V LP LL +ARVP +LDL+IS Q+ C LRPPVPED +Q ++E+F
Sbjct: 724 IXXXERXVRVXXXXXLPXLLFNARVPEVLDLVISXSGQVCCYLRPPVPED*MQFNNEIFX 545
Query: 476 VLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
EC SL++W Q+V PP+P TL A L+ S + PA+MA+ + H+ LIL R P+ L
Sbjct: 544 XRRECASLQIWSQVVDPPKPATLPATLEASLLWHCTPASMAVFGNMAHQLLILFRRPQTL 365
Query: 296 SQLLLVAARMPPHLNA 249
+ L VAAR+ PH ++
Sbjct: 364 PEFLFVAARVAPHYSS 317
Score = 50.6 bits (104), Expect(2) = 1e-011
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
+G +LLQ E ++G +V G*E + + PW+LE ++ W +R+EL A VD+L
Sbjct: 325 NGAPLVLLQTETQEGFVVSGRG*EAGAPYYQIRPWMLECSAKASWPPALREELQASVDQL 504
Query: 437 SE 442
E
Sbjct: 505 LE 510
Score = 42.8 bits (87), Expect(2) = 1e-006
Identities = 28/70 (40%), Positives = 34/70 (48%)
Frame = +1 / +3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WG AAT+R+ R G +RMR+ + AM AG + L A RV G GG T
Sbjct: 327 WGATRAATNRNSGRVCGLRKRMRSWCAILPNTAMDAGVQCQSKLASSVAGRVAGFGGSTT 506
Query: 439 *GQTSREGHS 468
* Q E HS
Sbjct: 507 *DQI*SEAHS 536
Score = 40.0 bits (81), Expect(2) = 1e-011
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEA 610
EQVVSN + AR+ ** DQE +ELVH +EA A
Sbjct: 583 EQVVSNSNTPARKX**RDQEPLELVH*KEAXA 678
Score = 39.1 bits (79), Expect = 0.11
Identities = 26/69 (37%), Positives = 30/69 (43%)
Frame = -1 / -3
Query: 465 MPLS*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSAS 286
M L+ L S S ST A NS R Q SS HG + SHP T P S
Sbjct: 533 MCLASDLVSSS*STEACNSSRNAGGQLALALHSSIHGRIW*YGAPASHPLPETTNPS*VS 354
Query: 285 ACSSKNASP 259
CSS + +P
Sbjct: 353 VCSSTSGAP 327
Score = 31.3 bits (62), Expect(2) = 1e-006
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1 / +3
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPT 636
Q +C LI RSR GTRA +RS G T T
Sbjct: 603 QHTCPEXLITRSRTSGTRALKRSXGNXXXXLTRT 704
>gb|DR071883.1|DR071883 RTDK1_22_E02.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_22_E02_A029 5', mRNA sequence
Length = 708
Score = 252 bits (545), Expect = 6e-066
Identities = 98/132 (74%), Positives = 109/132 (82%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L+KG W+ EED KL+N IT HGHGCW VPKLAGL RCGKSCRLRW N
Sbjct: 169 KMGRQPCCDKVGLKKGPWTAEEDRKLVNFITLHGHGCWREVPKLAGLLRCGKSCRLRWTN 348
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
YLRPDLKRG ++ EE LII+LHA +GNRWS+IAAQLPGRTDNEIKN WN+ IKKKLRQ
Sbjct: 349 YLRPDLKRGLLSESEEKLIIDLHAAIGNRWSRIAAQLPGRTDNEIKNYWNTRIKKKLRQM 528
Query: 615 GIDPNTHKPLTE 650
GIDP THKPLT+
Sbjct: 529 GIDPVTHKPLTQ 564
Score = 138 bits (297), Expect = 9e-032
Identities = 65/133 (48%), Positives = 73/133 (54%)
Frame = -3 / -2
Query: 646 VSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWA 467
V GLWV GS+P SFFL+ F FLISLSVLPG+CAAI DHLFP AC
Sbjct: 560 VRGLWVTGSIPIWRSFFLILVFQ*FLISLSVLPGNCAAIRDHLFPMAACRSMMSFSSDSD 381
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXF 287
N P +SG +*F+ +LQL PHL PASLGT Q PWPC V+
Sbjct: 380 NNPRFKSGRK*FVQRNLQLLPHLSRPASLGTSRQHPWPCRVIKFTSFLSSSAVHGPFFNP 201
Query: 286 CL*QQECLPISTQ 248
L Q CLPI Q
Sbjct: 200 TLSQHGCLPIFCQ 162
Score = 124 bits (265), Expect = 2e-027
Identities = 59/133 (44%), Positives = 83/133 (62%)
Frame = -2 / -1
Query: 656 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 477
+ L + LVG I++ L Q LLD RVP ILDL+IS PWQLR + PP+P S+ ++DE+
Sbjct: 570 LHLGERLVGHRIDSHLAQFLLDPRVPVILDLVISSPWQLRSDS*PPIPYGSM*INDELLL 391
Query: 476 VLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
+ +L++ Q++ P Q TTL+ + S+FG APA+MAM IH+F + L P L
Sbjct: 390 *FRQ*STLQIRAQVICPTQSTTLATSKQTSKFGYFAPASMAMQGDKIHQFSVFLCSPWTL 211
Query: 296 SQLLLVAARMPPH 258
Q V AR+PPH
Sbjct: 210 LQSHFVTARLPPH 172
Score = 51.9 bits (107), Expect(2) = 1e-012
Identities = 24/60 (40%), Positives = 40/60 (66%)
Frame = +2 / +3
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
+GEA +L Q+ E+G++ G +T E ++ AWPW+L +QT W++ + +EL* +DKL
Sbjct: 171 NGEATVL*QSGIEEGSMDCRGRQKTGEFYHPAWPWMLARSTQTCWSA*MWQEL*IALDKL 350
Score = 42.3 bits (86), Expect(2) = 1e-012
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +1 / +2
Query: 538 RSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
R+CQG LI RSRI GTR SRR+ R I PTS
Sbjct: 452 RNCQGELITRSRITGTRGSRRNCARWESIL*PTS 553
Score = 40.5 bits (82), Expect(2) = 2e-007
Identities = 24/54 (44%), Positives = 27/54 (50%)
Frame = +1 / +2
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVV 417
+WGG A T * R G R+ N *I MAM AGA +PN L RVV
Sbjct: 170 KWGGNRAVTKWD*RRVHGLQRKTENW*ILSPCMAMDAGAKYPNLLVCLDVARVV 331
Score = 38.2 bits (77), Expect = 0.21
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = -1 / -3
Query: 441 SDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNAS 262
+ +LS + YNS Q+VW +S HGHA +S V P + P S C S AS
Sbjct: 355 ASNLSNAIYNSCHI*ADQQVWVLRASIHGHAG**NSPVFCLPLQSMDPSSIPLCHSTVAS 176
Query: 261 P 259
P
Sbjct: 175 P 173
Score = 35.9 bits (72), Expect(2) = 2e-007
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY 646
E VV+N A ARE+** DQE +E QEE + + S PQA++
Sbjct: 429 E*VVTNRCAIAREN**RDQELLEHEDQEETAPDGNRSCDPQASH 560
>gb|AY356372.1| Pinus taeda R2R3-MYB transcription factor (MYB1) mRNA, complete cds
Length = 1023
Score = 252 bits (544), Expect = 8e-066
Identities = 98/131 (74%), Positives = 108/131 (82%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K L+KG W+ EED KL+N IT HGHGCW VPKLAGL RCGKSCRLRW NY
Sbjct: 1 MGRQPCCDKVGLKKGPWTAEEDRKLVNFITLHGHGCWREVPKLAGLLRCGKSCRLRWTNY 180
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG ++ EE LII+LHA +GNRWS+IAAQLPGRTDNEIKN WN+ IKKKLRQ G
Sbjct: 181 LRPDLKRGLLSESEEKLIIDLHAAIGNRWSRIAAQLPGRTDNEIKNYWNTRIKKKLRQMG 360
Query: 618 IDPNTHKPLTE 650
IDP THKPLT+
Sbjct: 361 IDPVTHKPLTQ 393
Score = 136 bits (291), Expect = 6e-031
Identities = 63/129 (48%), Positives = 71/129 (55%)
Frame = -3 / -2
Query: 646 VSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWA 467
V GLWV GS+P SFFL+ F FLISLSVLPG+CAAI DHLFP AC
Sbjct: 389 VRGLWVTGSIPIWRSFFLILVFQ*FLISLSVLPGNCAAIRDHLFPMAACRSMMSFSSDSD 210
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXF 287
N P +SG +*F+ +LQL PHL PASLGT Q PWPC V+
Sbjct: 209 NNPRFKSGRK*FVQRNLQLLPHLSRPASLGTSRQHPWPCRVIKFTSFLSSSAVHGPFFNP 30
Query: 286 CL*QQECLP 260
L Q CLP
Sbjct: 29 TLSQHGCLP 3
Score = 124 bits (265), Expect = 2e-027
Identities = 59/133 (44%), Positives = 83/133 (62%)
Frame = -2 / -1
Query: 656 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 477
+ L + LVG I++ L Q LLD RVP ILDL+IS PWQLR + PP+P S+ ++DE+
Sbjct: 399 LHLGERLVGHRIDSHLAQFLLDPRVPVILDLVISSPWQLRSDS*PPIPYGSM*INDELLL 220
Query: 476 VLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
+ +L++ Q++ P Q TTL+ + S+FG APA+MAM IH+F + L P L
Sbjct: 219 *FRQ*STLQIRAQVICPTQSTTLATSKQTSKFGYFAPASMAMQGDKIHQFSVFLCSPWTL 40
Query: 296 SQLLLVAARMPPH 258
Q V AR+PPH
Sbjct: 39 LQSHFVTARLPPH 1
Score = 51.5 bits (106), Expect(2) = 2e-012
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +2 / +3
Query: 260 GEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
GEA +L Q+ E+G++ G +T E ++ AWPW+L +QT W++ + +EL* +DKL
Sbjct: 3 GEATVL*QSGIEEGSMDCRGRQKTGEFYHPAWPWMLARSTQTCWSA*MWQEL*IALDKL 179
Score = 42.3 bits (86), Expect(2) = 2e-012
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +1 / +2
Query: 538 RSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
R+CQG LI RSRI GTR SRR+ R I PTS
Sbjct: 281 RNCQGELITRSRITGTRGSRRNCARWESIL*PTS 382
Score = 39.6 bits (80), Expect(2) = 4e-007
Identities = 24/53 (45%), Positives = 26/53 (49%)
Frame = +1 / +2
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVV 417
WGG A T * R G R+ N *I MAM AGA +PN L RVV
Sbjct: 2 WGGNRAVTKWD*RRVHGLQRKTENW*ILSPCMAMDAGAKYPNLLVCLDVARVV 160
Score = 38.2 bits (77), Expect = 0.21
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = -1 / -3
Query: 441 SDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNAS 262
+ +LS + YNS Q+VW +S HGHA +S V P + P S C S AS
Sbjct: 184 ASNLSNAIYNSCHI*ADQQVWVLRASIHGHAG**NSPVFCLPLQSMDPSSIPLCHSTVAS 5
Query: 261 P 259
P
Sbjct: 4 P 2
Score = 35.9 bits (72), Expect(2) = 4e-007
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY 646
E VV+N A ARE+** DQE +E QEE + + S PQA++
Sbjct: 258 E*VVTNRCAIAREN**RDQELLEHEDQEETAPDGNRSCDPQASH 389
>gb|BX784172.1|BX784172 BX784172 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 130B11, mRNA sequence
Length = 685
Score = 237 bits (511), Expect = 3e-061
Identities = 93/135 (68%), Positives = 106/135 (78%)
Frame = +3 / +2
Query: 243 LHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRL 422
+ C G S K KLRKGLWSPEED+KL+N++ K+G GCWS V K AGLQRCGKSCRL
Sbjct: 47 MSCTTGGLSSPISKPKLRKGLWSPEEDDKLINYMMKNGQGCWSDVAKQAGLQRCGKSCRL 226
Query: 423 RWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
RWINYLRPDLKRGAF+ EE LII LH++LGNRWSQIAA+LPGRTDNEIKN WNSCIKKK
Sbjct: 227 RWINYLRPDLKRGAFSPQEEQLIIHLHSILGNRWSQIAARLPGRTDNEIKNFWNSCIKKK 406
Query: 603 LRQKGIDPNTHKPLT 647
L+ N K ++
Sbjct: 407 LKHLSASTNNSKSIS 451
Score = 130 bits (279), Expect = 3e-029
Identities = 57/90 (63%), Positives = 61/90 (67%)
Frame = -3 / -2
Query: 610 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*F 431
C +FF M EF +FLISLSV PG AAI*DHL PR C NAP LRSGL+*
Sbjct: 414 CFNFFFMQEFQKFLISLSVRPGKRAAI*DHLLPRMECRCMINCSSWGENAPRLRSGLK*L 235
Query: 430 IHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
IHLSLQLFPHL PA L T LQQPWP F+M
Sbjct: 234 IHLSLQLFPHLCRPACLATSLQQPWPFFIM 145
Score = 116 bits (249), Expect = 4e-025
Identities = 53/101 (52%), Positives = 70/101 (69%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLLL A VP ILDL++ Q CNLRPPV E+ +Q+ D++FF+ +C + EV P IV P
Sbjct: 409 QLLLYAGVPEILDLVVRTSGQTGCNLRPPVAENGMQVYDQLFFLG*KCTAFEVGP*IVNP 230
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPE 303
PQPT SA L+ S G+ APA +A+ +V+ EF+ILLR PE
Sbjct: 229 PQPTAFSASLQTSLLGDIAPATLAVFHHVVDEFIILLRRPE 107
Score = 61.6 bits (128), Expect(2) = 1e-010
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = +2 / +1
Query: 278 LQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVD 430
LQ +A++ LV *GG* TH+ H++ P LLE C Q W++++RK+L*AEVD
Sbjct: 82 LQTQAKERPLVA*GG**THQLHDEKRPGLLERCRQASWSAEMRKKL*AEVD 234
Score = 57.9 bits (120), Expect(2) = 2e-009
Identities = 33/65 (50%), Positives = 40/65 (61%)
Frame = +1 / +3
Query: 271 LAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQT 450
L + + S* + SG LRRM NS T* A AGA+ P+ L + AE+ VG*GG TI*G T
Sbjct: 75 LPSPNPS*GKASGRLRRMINSSTT**KTARVAGAMSPSKLVCRDAEKAVG*GGLTI*GPT 254
Query: 451 SREGH 465
S H
Sbjct: 255 SNAVH 269
Score = 49.2 bits (101), Expect = 1e-004
Identities = 25/50 (50%), Positives = 28/50 (56%)
Frame = -1 / -3
Query: 453 *GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTR 304
*G A +S STSAY+ FR Q W SS+ G C *V HPPQ TR
Sbjct: 257 *GRALNS*STSAYSFFRISADQLAWRHRSSNPGRFSSCS**VYHPPQATR 108
Score = 26.3 bits (51), Expect(2) = 1e-010
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +1 / +3
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAV 666
Q C RSRI GT A RRS* PT + L LI +
Sbjct: 339 QPVCPDVRTTRSRISGTPA*RRS*NTFRPPPTTVNLSLHLIVPI 470
Score = 25.8 bits (50), Expect(2) = 2e-009
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 566 DQESMELVHQEEAE 607
DQE +EL+H+EE E
Sbjct: 370 DQEFLELLHKEEVE 411
>gb|DR685654.1|DR685654 EST1075731 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAB633 3' end, mRNA sequence
Length = 786
Score = 236 bits (509), Expect = 5e-061
Identities = 94/150 (62%), Positives = 111/150 (74%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
EMGR CC K L+KG W+ EED+KL++ I HGH CW +VPKLAGL RCGKSCRLRW N
Sbjct: 25 EMGRQPCCDKVGLKKGPWTAEEDQKLISFILNHGHCCWRAVPKLAGLLRCGKSCRLRWTN 204
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
YLRPDLKRG ++ EE LII+LH+ LGNRWS+IAA LPGRTDNEIKN WN+ IKKKL++
Sbjct: 205 YLRPDLKRGLLSESEEQLIIDLHSQLGNRWSKIAAHLPGRTDNEIKNYWNTHIKKKLKRM 384
Query: 615 GIDPNTHKPLTEADHGGAAPTISTERTSGS 704
GIDP TH P+ + G + E T S
Sbjct: 385 GIDPVTHGPIIDQAEGKPSKPALDEVTEES 474
Score = 105 bits (225), Expect = 8e-022
Identities = 54/127 (42%), Positives = 73/127 (57%)
Frame = -2 / -1
Query: 626 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEV 447
GI++ QLLLD VP ILD II P Q+ NLRPPV E +++++E+ F PS +V
Sbjct: 396 GIDSHALQLLLDMSVPVILDFIICPSRQVCGNLRPPVTELGMEINNELLFRF**KPSFQV 217
Query: 446 WPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARM 267
WP ++ PP + + SE N PAAMAM+ +E L+LL P Q LV AR+
Sbjct: 216 WP*VIRPP*SAAFTTSEQASELRNCTPAAMAMVENERNELLVLLGSPWSFLQSHLVTARL 37
Query: 266 PPHLNAM 246
PHL +
Sbjct: 36 SPHLRRL 16
Score = 60.2 bits (125), Expect(2) = 8e-020
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = -3 / -2
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
S+ G V GS+P SFFL+ F FLISLSV PG CAAI DHL P
Sbjct: 419 SIMGPCVTGSIPMRFSFFLI*VFQ*FLISLSVRPGKCAAILDHLLP 282
Score = 58.3 bits (121), Expect(2) = 8e-020
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = -3 / -2
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
+P RSG +*F+HL+LQL PHL PAS GT QQ WP
Sbjct: 233 SPRFRSGRK*FVHLNLQLLPHLSRPASFGTARQQQWP 123
Score = 47.8 bits (98), Expect(2) = 2e-008
Identities = 28/70 (40%), Positives = 36/70 (51%)
Frame = +1 / +2
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG* 432
LRWG A T * + G RR R+S ++ +MA+AAG F +SL + *GG
Sbjct: 23 LRWGDNRAVTRWD*RKDHGLPRRTRSSFLSFSTMAIAAGVQFRSSLACSDVVKAAD*GGR 202
Query: 433 TI*GQTSREG 462
GQT EG
Sbjct: 203 ITYGQT*NEG 232
Score = 43.7 bits (89), Expect(2) = 5e-007
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2 / +3
Query: 254 *DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDK 433
*DG +L Q E+ + GG E H H++ WP LL S+ RW +++ +L +VD+
Sbjct: 24 *DGATTVL*QGGTEERTMDCRGGPEAHFFHSQPWPLLLACSSEARWPAQMW*KLQIKVDE 203
Query: 434 L 436
L
Sbjct: 204 L 206
Score = 35.9 bits (72), Expect = 1.0
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = -1 / -3
Query: 450 GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSK 271
GLA + ST + + QR E +SS+GH * S PP+ + S C S
Sbjct: 220 GLAVSNSSTLICSFYHI*AGQRASELHASSNGHG*E*KK*ASGPPRQSMVLSSVPPCHST 41
Query: 270 NASPSQR 250
+PSQ+
Sbjct: 40 VVAPSQK 20
Score = 32.2 bits (64), Expect(2) = 2e-008
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1 / +2
Query: 541 SCQGGLIMRSRIYGTRASRRS*GRKALIP 627
+C G IM+SRI GT SRRS* IP
Sbjct: 311 TCLDGQIMKSRITGTLISRRS*SAWESIP 397
Score = 31.3 bits (62), Expect(2) = 5e-007
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2 / +3
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEA 610
QVV +C A D **+QE +E +QEEAEA
Sbjct: 288 QVV*DCRTLAWTDR**NQELLEHSYQEEAEA 380
>gb|AY356371.1| Pinus taeda R2R3-MYB transcription factor (MYB4) mRNA, complete cds
Length = 945
Score = 233 bits (504), Expect = 3e-060
Identities = 92/135 (68%), Positives = 105/135 (77%)
Frame = +3 / +1
Query: 243 LHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRL 422
+ C G S K KLRKGLWSPEED+KL+N++ K+G GCWS V K AGLQRCGKSCRL
Sbjct: 1 MSCTTGGLSSPVSKPKLRKGLWSPEEDDKLINYMMKNGQGCWSDVAKQAGLQRCGKSCRL 180
Query: 423 RWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
RWINYLRPDLKRGAF+ EE II LH++LGNRWSQIAA+LPGRTDNEIKN WNSCIKKK
Sbjct: 181 RWINYLRPDLKRGAFSPQEEHWIIHLHSILGNRWSQIAARLPGRTDNEIKNFWNSCIKKK 360
Query: 603 LRQKGIDPNTHKPLT 647
L+ N K ++
Sbjct: 361 LKHLSASTNNSKSIS 405
Score = 131 bits (280), Expect = 2e-029
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -3 / -2
Query: 610 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*F 431
C +FF M EF +FLISLSV PG+ AAI*DHL PR C NAP LRSGL+*
Sbjct: 368 CFNFFFMQEFQKFLISLSVRPGNRAAI*DHLLPRMECKCMIQCSSWGENAPRLRSGLK*L 189
Query: 430 IHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
IHLSLQLFPHL PA L T LQQPWP F+M
Sbjct: 188 IHLSLQLFPHLCRPACLATSLQQPWPFFIM 99
Score = 114 bits (244), Expect = 2e-024
Identities = 53/101 (52%), Positives = 69/101 (68%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLLL A VP ILDL++ Q CNLRPPV E+ +Q+ D +FF+ +C + EV P IV P
Sbjct: 363 QLLLYAGVPEILDLVVRTSGQPGCNLRPPVAENGMQVYDPMFFLG*KCTAFEVGP*IVNP 184
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPE 303
PQPT SA L+ S G+ APA +A+ +V+ EF+ILLR PE
Sbjct: 183 PQPTAFSASLQTSLLGDIAPATLAVFHHVVDEFIILLRRPE 61
Score = 61.6 bits (128), Expect(2) = 4e-011
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = +2 / +3
Query: 278 LQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVD 430
LQ +A++ LV *GG* TH+ H++ P LLE C Q W++++RK+L*AEVD
Sbjct: 36 LQTQAKERPLVA*GG**THQLHDEKRPGLLERCRQASWSAEMRKKL*AEVD 188
Score = 57.9 bits (120), Expect(2) = 2e-009
Identities = 33/65 (50%), Positives = 40/65 (61%)
Frame = +1 / +2
Query: 271 LAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQT 450
L + + S* + SG LRRM NS T* A AGA+ P+ L + AE+ VG*GG TI*G T
Sbjct: 29 LPSPNPS*GKASGRLRRMINSSTT**KTARVAGAMSPSKLVCRDAEKAVG*GGLTI*GPT 208
Query: 451 SREGH 465
S H
Sbjct: 209 SNAVH 223
Score = 49.2 bits (101), Expect = 1e-004
Identities = 25/50 (50%), Positives = 28/50 (56%)
Frame = -1 / -3
Query: 453 *GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTR 304
*G A +S STSAY+ FR Q W SS+ G C *V HPPQ TR
Sbjct: 211 *GRALNS*STSAYSFFRISADQLAWRHRSSNPGRFSSCS**VYHPPQATR 62
Score = 27.6 bits (54), Expect(2) = 4e-011
Identities = 19/44 (43%), Positives = 20/44 (45%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAV 666
Q C RSRI GT A RRS* PT + L LI V
Sbjct: 293 QPGCPDVRTTRSRISGTPA*RRS*NTFRPPPTTVNLSLHLIVPV 424
Score = 25.8 bits (50), Expect(2) = 2e-009
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 566 DQESMELVHQEEAE 607
DQE +EL+H+EE E
Sbjct: 324 DQEFLELLHKEEVE 365
>gb|CX650454.1|CX650454 COLD1_45_F10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_45_F10_A029 5', mRNA sequence
Length = 826
Score = 233 bits (503), Expect = 4e-060
Identities = 86/140 (61%), Positives = 111/140 (79%)
Frame = +3 / +1
Query: 225 GWSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRC 404
G ++ L ++MGR CC K KG W+ EED++L+ HI HG GCW S+PK AGL RC
Sbjct: 10 G*AASFLCVLKMGRSPCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRC 189
Query: 405 GKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN 584
GKSCRLRWINYLRPDLKRG F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN
Sbjct: 190 GKSCRLRWINYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWN 369
Query: 585 SCIKKKLRQKGIDPNTHKPL 644
+ IK+KL +G+DP +H+PL
Sbjct: 370 THIKRKLLNRGLDPQSHRPL 429
Score = 116 bits (247), Expect = 7e-025
Identities = 54/148 (36%), Positives = 77/148 (52%)
Frame = -2 / -2
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G G AV+ L++ +G+G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 471 GQRGAGRVAVVRLAEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAEQ 292
Query: 506 SVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEF 327
V+ DDE F E +L++ Q+VYP +P L A +P G RAPA A+ V E
Sbjct: 291 GVEFDDEFVFFF*EVSTLQIRTQVVYPSEPAALPAAHQPCGLGKRAPATFAVSSNVGDEA 112
Query: 326 LILLRGPEPLSQLLLVAARMPPHLNAMQ 243
++L GP P + A PHL Q
Sbjct: 111 IVLFFGPRPFVCMSFFTAGRSPHLQYTQ 28
Score = 94.5 bits (200), Expect = 2e-018
Identities = 49/96 (51%), Positives = 53/96 (55%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS P +F LM F F ISLSV PG+ AI DHL P S
Sbjct: 425 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLMMSSSSSSEKF 246
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIH SLQLFP SPA+LG+E QQP P
Sbjct: 245 PRFRSGRR*FIHRSLQLFPQRISPAALGSERQQPSP 138
Score = 42.3 bits (86), Expect(2) = 5e-006
Identities = 25/65 (38%), Positives = 30/65 (46%)
Frame = +1 / +2
Query: 241 FCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG 420
FC+ RWG + A +G GP +R S T + A AGA FP G A R G
Sbjct: 26 FCVY*RWGDLPAVKKLIQTKGRGPKKRTIASSPTFELTAKVAGARFPRPQG*CAAGRAAG 205
Query: 421 *GG*T 435
G*T
Sbjct: 206 SDG*T 220
Score = 29.5 bits (58), Expect(2) = 5e-006
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C AR D D+E +E HQE+
Sbjct: 300 QQVVSYCRQIARADGQRDKELLEYSHQEK 386
>gb|DR024153.1|DR024153 STRS1_62_E05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_62_E05_A034 5', mRNA sequence
Length = 791
Score = 233 bits (503), Expect = 4e-060
Identities = 86/140 (61%), Positives = 111/140 (79%)
Frame = +3 / +2
Query: 225 GWSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRC 404
G ++ L ++MGR CC K KG W+ EED++L+ HI HG GCW S+PK AGL RC
Sbjct: 5 G*AASFLCVLKMGRSPCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRC 184
Query: 405 GKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN 584
GKSCRLRWINYLRPDLKRG F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN
Sbjct: 185 GKSCRLRWINYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWN 364
Query: 585 SCIKKKLRQKGIDPNTHKPL 644
+ IK+KL +G+DP +H+PL
Sbjct: 365 THIKRKLLNRGLDPQSHRPL 424
Score = 116 bits (247), Expect = 7e-025
Identities = 54/148 (36%), Positives = 77/148 (52%)
Frame = -2 / -2
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G G AV+ L++ +G+G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 466 GQRGAGRVAVVRLAEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAEQ 287
Query: 506 SVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEF 327
V+ DDE F E +L++ Q+VYP +P L A +P G RAPA A+ V E
Sbjct: 286 GVEFDDEFVFFF*EVSTLQIRTQVVYPSEPAALPAAHQPCGLGKRAPATFAVSSNVGDEA 107
Query: 326 LILLRGPEPLSQLLLVAARMPPHLNAMQ 243
++L GP P + A PHL Q
Sbjct: 106 IVLFFGPRPFVCMSFFTAGRSPHLQYTQ 23
Score = 94.5 bits (200), Expect = 2e-018
Identities = 49/96 (51%), Positives = 53/96 (55%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS P +F LM F F ISLSV PG+ AI DHL P S
Sbjct: 420 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLMMSSSSSSEKF 241
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIH SLQLFP SPA+LG+E QQP P
Sbjct: 240 PRFRSGRR*FIHRSLQLFPQRISPAALGSERQQPSP 133
Score = 42.3 bits (86), Expect(2) = 5e-006
Identities = 25/65 (38%), Positives = 30/65 (46%)
Frame = +1 / +3
Query: 241 FCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG 420
FC+ RWG + A +G GP +R S T + A AGA FP G A R G
Sbjct: 21 FCVY*RWGDLPAVKKLIQTKGRGPKKRTIASSPTFELTAKVAGARFPRPQG*CAAGRAAG 200
Query: 421 *GG*T 435
G*T
Sbjct: 201 SDG*T 215
Score = 29.5 bits (58), Expect(2) = 5e-006
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C AR D D+E +E HQE+
Sbjct: 295 QQVVSYCRQIARADGQRDKELLEYSHQEK 381
>gb|CF388213.1|CF388213 RTDR2_1_B07.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_1_B07_A021 5', mRNA
sequence
Length = 712
Score = 232 bits (501), Expect = 7e-060
Identities = 85/138 (61%), Positives = 110/138 (79%)
Frame = +3 / +3
Query: 231 SSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGK 410
++ L ++MGR CC K KG W+ EED++L+ HI HG GCW S+PK AGL RCGK
Sbjct: 27 AASFLCVLKMGRSPCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGK 206
Query: 411 SCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSC 590
SCRLRWINYLRPDLKRG F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+
Sbjct: 207 SCRLRWINYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTH 386
Query: 591 IKKKLRQKGIDPNTHKPL 644
IK+KL +G+DP +H+PL
Sbjct: 387 IKRKLLNRGLDPQSHRPL 440
Score = 116 bits (247), Expect = 7e-025
Identities = 54/148 (36%), Positives = 77/148 (52%)
Frame = -2 / -3
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G G AV+ L++ +G+G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 482 GQRGAGRVAVVRLAEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAEQ 303
Query: 506 SVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEF 327
V+ DDE F E +L++ Q+VYP +P L A +P G RAPA A+ V E
Sbjct: 302 GVEFDDEFVFFF*EVSTLQIRTQVVYPSEPAALPAAHQPCGLGKRAPATFAVSSNVGDEA 123
Query: 326 LILLRGPEPLSQLLLVAARMPPHLNAMQ 243
++L GP P + A PHL Q
Sbjct: 122 IVLFFGPRPFVCMSFFTAGRSPHLQYTQ 39
Score = 94.5 bits (200), Expect = 2e-018
Identities = 49/96 (51%), Positives = 53/96 (55%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS P +F LM F F ISLSV PG+ AI DHL P S
Sbjct: 436 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLMMSSSSSSEKF 257
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIH SLQLFP SPA+LG+E QQP P
Sbjct: 256 PRFRSGRR*FIHRSLQLFPQRISPAALGSERQQPSP 149
Score = 42.3 bits (86), Expect(2) = 5e-006
Identities = 25/65 (38%), Positives = 30/65 (46%)
Frame = +1 / +1
Query: 241 FCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG 420
FC+ RWG + A +G GP +R S T + A AGA FP G A R G
Sbjct: 37 FCVY*RWGDLPAVKKLIQTKGRGPKKRTIASSPTFELTAKVAGARFPRPQG*CAAGRAAG 216
Query: 421 *GG*T 435
G*T
Sbjct: 217 SDG*T 231
Score = 29.5 bits (58), Expect(2) = 5e-006
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C AR D D+E +E HQE+
Sbjct: 311 QQVVSYCRQIARADGQRDKELLEYSHQEK 397
>gb|DR694473.1|DR694473 EST1084565 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEC94 3' end, mRNA sequence
Length = 822
Score = 232 bits (501), Expect = 7e-060
Identities = 93/150 (62%), Positives = 110/150 (73%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
EMGR CC K L+KG W+ EED+KL++ I HGH CW +VPKLAGL RCGKSCRLRW N
Sbjct: 78 EMGRQPCCDKVGLKKGPWTAEEDQKLISFILNHGHCCWRAVPKLAGLLRCGKSCRLRWTN 257
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
YLRPDLKRG ++ EE LII+LH+ LGNRWS+IAA LPGRTDNEIKN WN+ IKKKL++
Sbjct: 258 YLRPDLKRGLLSESEEQLIIDLHSQLGNRWSKIAAHLPGRTDNEIKNYWNTHIKKKLKRM 437
Query: 615 GIDPNTHKPLTEADHGGAAPTISTERTSGS 704
GIDP T P+ + G + E T S
Sbjct: 438 GIDPVTRGPIIDQAEGKPSKPALDEVTEES 527
Score = 105 bits (225), Expect = 8e-022
Identities = 54/127 (42%), Positives = 73/127 (57%)
Frame = -2 / -2
Query: 626 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEV 447
GI++ QLLLD VP ILD II P Q+ NLRPPV E +++++E+ F PS +V
Sbjct: 449 GIDSHALQLLLDMSVPVILDFIICPSRQVCGNLRPPVTELGMEINNELLFRF**KPSFQV 270
Query: 446 WPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARM 267
WP ++ PP + + SE N PAAMAM+ +E L+LL P Q LV AR+
Sbjct: 269 WP*VIRPP*SAAFTTSEQASELRNCTPAAMAMVENERNELLVLLGSPWSFLQSHLVTARL 90
Query: 266 PPHLNAM 246
PHL +
Sbjct: 89 SPHLRRL 69
Score = 59.7 bits (124), Expect(2) = 1e-019
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = -3 / -3
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
S+ G V GS+P SFFL+ F FLISLSV PG CAAI DHL P
Sbjct: 472 SIMGPRVTGSIPMRFSFFLI*VFQ*FLISLSVRPGKCAAILDHLLP 335
Score = 58.3 bits (121), Expect(2) = 1e-019
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = -3 / -3
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
+P RSG +*F+HL+LQL PHL PAS GT QQ WP
Sbjct: 286 SPRFRSGRK*FVHLNLQLLPHLSRPASFGTARQQQWP 176
Score = 47.8 bits (98), Expect(2) = 2e-008
Identities = 28/70 (40%), Positives = 36/70 (51%)
Frame = +1 / +1
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG* 432
LRWG A T * + G RR R+S ++ +MA+AAG F +SL + *GG
Sbjct: 76 LRWGDNRAVTRWD*RKDHGLPRRTRSSFLSFSTMAIAAGVQFRSSLACSDVVKAAD*GGR 255
Query: 433 TI*GQTSREG 462
GQT EG
Sbjct: 256 ITYGQT*NEG 285
Score = 43.7 bits (89), Expect(2) = 5e-007
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2 / +2
Query: 254 *DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDK 433
*DG +L Q E+ + GG E H H++ WP LL S+ RW +++ +L +VD+
Sbjct: 77 *DGATTVL*QGGTEERTMDCRGGPEAHFFHSQPWPLLLACSSEARWPAQMW*KLQIKVDE 256
Query: 434 L 436
L
Sbjct: 257 L 259
Score = 35.9 bits (72), Expect = 1.0
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = -1 / -1
Query: 450 GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSK 271
GLA + ST + + QR E +SS+GH * S PP+ + S C S
Sbjct: 273 GLAVSNSSTLICSFYHI*AGQRASELHASSNGHG*E*KK*ASGPPRQSMVLSSVPPCHST 94
Query: 270 NASPSQR 250
+PSQ+
Sbjct: 93 VVAPSQK 73
Score = 32.2 bits (64), Expect(2) = 2e-008
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1 / +1
Query: 541 SCQGGLIMRSRIYGTRASRRS*GRKALIP 627
+C G IM+SRI GT SRRS* IP
Sbjct: 364 TCLDGQIMKSRITGTLISRRS*SAWESIP 450
Score = 31.3 bits (62), Expect(2) = 5e-007
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2 / +2
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEA 610
QVV +C A D **+QE +E +QEEAEA
Sbjct: 341 QVV*DCRTLAWTDR**NQELLEHSYQEEAEA 433
>gb|DT638742.1|DT638742 EST1153673 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHI92 3' end, mRNA sequence
Length = 822
Score = 232 bits (501), Expect = 7e-060
Identities = 93/150 (62%), Positives = 110/150 (73%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
EMGR CC K L+KG W+ EED+KL++ I HGH CW +VPKLAGL RCGKSCRLRW N
Sbjct: 86 EMGRQPCCDKVGLKKGPWTAEEDQKLISFILNHGHCCWRAVPKLAGLLRCGKSCRLRWTN 265
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
YLRPDLKRG ++ EE LII+LH+ LGNRWS+IAA LPGRTDNEIKN WN+ IKKKL++
Sbjct: 266 YLRPDLKRGLLSESEEQLIIDLHSQLGNRWSKIAAHLPGRTDNEIKNYWNTHIKKKLKRM 445
Query: 615 GIDPNTHKPLTEADHGGAAPTISTERTSGS 704
GIDP T P+ + G + E T S
Sbjct: 446 GIDPVTRGPIIDQAEGKPSKPALDEVTEES 535
Score = 105 bits (225), Expect = 8e-022
Identities = 54/127 (42%), Positives = 73/127 (57%)
Frame = -2 / -3
Query: 626 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEV 447
GI++ QLLLD VP ILD II P Q+ NLRPPV E +++++E+ F PS +V
Sbjct: 457 GIDSHALQLLLDMSVPVILDFIICPSRQVCGNLRPPVTELGMEINNELLFRF**KPSFQV 278
Query: 446 WPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARM 267
WP ++ PP + + SE N PAAMAM+ +E L+LL P Q LV AR+
Sbjct: 277 WP*VIRPP*SAAFTTSEQASELRNCTPAAMAMVENERNELLVLLGSPWSFLQSHLVTARL 98
Query: 266 PPHLNAM 246
PHL +
Sbjct: 97 SPHLRRL 77
Score = 59.7 bits (124), Expect(2) = 1e-019
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = -3 / -1
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
S+ G V GS+P SFFL+ F FLISLSV PG CAAI DHL P
Sbjct: 480 SIMGPRVTGSIPMRFSFFLI*VFQ*FLISLSVRPGKCAAILDHLLP 343
Score = 58.3 bits (121), Expect(2) = 1e-019
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = -3 / -1
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
+P RSG +*F+HL+LQL PHL PAS GT QQ WP
Sbjct: 294 SPRFRSGRK*FVHLNLQLLPHLSRPASFGTARQQQWP 184
Score = 47.8 bits (98), Expect(2) = 2e-008
Identities = 28/70 (40%), Positives = 36/70 (51%)
Frame = +1 / +3
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG* 432
LRWG A T * + G RR R+S ++ +MA+AAG F +SL + *GG
Sbjct: 84 LRWGDNRAVTRWD*RKDHGLPRRTRSSFLSFSTMAIAAGVQFRSSLACSDVVKAAD*GGR 263
Query: 433 TI*GQTSREG 462
GQT EG
Sbjct: 264 ITYGQT*NEG 293
Score = 43.7 bits (89), Expect(2) = 5e-007
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2 / +1
Query: 254 *DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDK 433
*DG +L Q E+ + GG E H H++ WP LL S+ RW +++ +L +VD+
Sbjct: 85 *DGATTVL*QGGTEERTMDCRGGPEAHFFHSQPWPLLLACSSEARWPAQMW*KLQIKVDE 264
Query: 434 L 436
L
Sbjct: 265 L 267
Score = 35.9 bits (72), Expect = 1.0
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = -1 / -2
Query: 450 GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSK 271
GLA + ST + + QR E +SS+GH * S PP+ + S C S
Sbjct: 281 GLAVSNSSTLICSFYHI*AGQRASELHASSNGHG*E*KK*ASGPPRQSMVLSSVPPCHST 102
Query: 270 NASPSQR 250
+PSQ+
Sbjct: 101 VVAPSQK 81
Score = 32.2 bits (64), Expect(2) = 2e-008
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1 / +3
Query: 541 SCQGGLIMRSRIYGTRASRRS*GRKALIP 627
+C G IM+SRI GT SRRS* IP
Sbjct: 372 TCLDGQIMKSRITGTLISRRS*SAWESIP 458
Score = 31.3 bits (62), Expect(2) = 5e-007
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2 / +1
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEA 610
QVV +C A D **+QE +E +QEEAEA
Sbjct: 349 QVV*DCRTLAWTDR**NQELLEHSYQEEAEA 441
>gb|DR161095.1|DR161095 RTFE1_9_G03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_9_G03_A029 5', mRNA sequence
Length = 760
Score = 232 bits (500), Expect = 9e-060
Identities = 86/138 (62%), Positives = 108/138 (78%)
Frame = +3 / +2
Query: 231 SSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGK 410
+S + CV+MGR CC K KG W+ EED+ L+ HI HG GCW S+PK AGL RCGK
Sbjct: 23 ASLICLCVKMGRSPCCEKAHTNKGAWTKEEDDHLIAHIRAHGEGCWRSLPKAAGLLRCGK 202
Query: 411 SCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSC 590
SCRLRWINYLRPD+KRG F+ +E++LII+LH+++GN+WS IAA+LPGRTDNEIKN WNS
Sbjct: 203 SCRLRWINYLRPDIKRGNFSSEEDELIIQLHSLIGNKWSLIAAKLPGRTDNEIKNYWNSH 382
Query: 591 IKKKLRQKGIDPNTHKPL 644
IK+KL +G DP +H+ L
Sbjct: 383 IKRKLVSRGFDPRSHRTL 436
Score = 95.5 bits (202), Expect = 1e-018
Identities = 42/118 (35%), Positives = 62/118 (52%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
Q LD VP +LDL++ P Q CN RP V + ++LDDE+ F E +L++ Q++YP
Sbjct: 397 QFSLDVGVPVVLDLVVRPSGQFCCNQRPLVADKGMKLDDELIFF**EVSTLDIRTQVIYP 218
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLN 252
+P LS +P G R P A ++ V E ++ GP P + AA PH +
Sbjct: 217 SEPAALSTSQQPCGLGKRTPTAFSVGSNVSDEVVVFFFGPRPFVCMSFFAAGRSPHFD 44
Score = 57.4 bits (119), Expect(2) = 3e-018
Identities = 26/41 (63%), Positives = 28/41 (68%)
Frame = -3 / -2
Query: 634 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
W LGS P +F LM EF FLISLSV PG+ AAI DHL P
Sbjct: 426 WDLGSNPLLTNFLLMWEFQ*FLISLSVRPGNFAAIRDHLLP 304
Score = 56.1 bits (116), Expect(2) = 3e-018
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -3 / -2
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P L SG +*FIH SLQLFPH SPA+LG+E QQP P
Sbjct: 252 PRLISGRK*FIHRSLQLFPHRSSPAALGSERQQPSP 145
Score = 37.3 bits (75), Expect(2) = 1e-004
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS+CS AR D DQE +EL HQE+
Sbjct: 307 QQVVSDCSKIARTDGQRDQELLELPHQEK 393
Score = 29.9 bits (59), Expect(2) = 1e-004
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2 / +1
Query: 332 HESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
H SH+ LL SQ R A+ + KEL A +DKL
Sbjct: 124 HRSHSSPRRRLLAFASQGRRAAAMWKELQAPMDKL 228
>gb|DR744198.1|DR744198 RTCU1_20_G08.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_20_G08_A029 5', mRNA sequence
Length = 644
Score = 232 bits (500), Expect = 9e-060
Identities = 87/141 (61%), Positives = 107/141 (75%)
Frame = +3 / +1
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
+ MGR CC KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWI
Sbjct: 73 LNMGRAPCCSNGDRNKGAWTKEEDDRLIQYIKVHGEGCWRSLPKAAGLLRCGKSCRLRWI 252
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
NYLRPDLKRG F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL
Sbjct: 253 NYLRPDLKRGFFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLIS 432
Query: 612 KGIDPNTHKPLTEADHGGAAP 674
GIDP TH+P + H +P
Sbjct: 433 MGIDPLTHRPFQKTSHHHPSP 495
Score = 113 bits (241), Expect = 5e-024
Identities = 55/96 (57%), Positives = 58/96 (60%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G WV GS+P +SF EF F ISLSV PG AI DHLFPR AC S
Sbjct: 461 GRWVRGSIPMLISFRFRCEFQ*FFISLSVRPGKRPAIKDHLFPRRACSLRIRSSSSSEKN 282
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIHLSLQL PH PA+LG E QQP P
Sbjct: 281 PRLRSGRR*FIHLSLQLLPHRSRPAALGRERQQPSP 174
Score = 101 bits (215), Expect = 2e-020
Identities = 47/135 (34%), Positives = 74/135 (54%)
Frame = -2 / -3
Query: 659 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 480
V SL K +G G+ + + L RVP +L L+I WQ RP + ++ VQ ++++
Sbjct: 480 VRSLLKRTMG*GVYSHADKFSLQMRVPVVLYLVICSSWQTASYQRPLISKEGVQFENKII 301
Query: 479 FVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEP 300
FV GE PS E+ +I+YP Q T + P + G RAPA ++M ++ + +IL GP
Sbjct: 300 FVFGEKPSFEIRAKIIYPSQSATFATPKQTCGLGERAPATLSMNLNILDKPVILFFGPGS 121
Query: 299 LSQLLLVAARMPPHL 255
+ + AAR P H+
Sbjct: 120 FVSVTVRAARRPSHV 76
>gb|CF387084.1|CF387084 RTDR1_10_E10.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_10_E10_A015 5', mRNA
sequence
Length = 733
Score = 231 bits (499), Expect = 1e-059
Identities = 84/131 (64%), Positives = 107/131 (81%)
Frame = +3 / +3
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
++MGR CC K KG W+ EED++L+ HI HG GCW S+PK AGL RCGKSCRLRWI
Sbjct: 6 LKMGRSFCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWI 185
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
NYLRPDLKRG F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL
Sbjct: 186 NYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLN 365
Query: 612 KGIDPNTHKPL 644
+G+DP +H+PL
Sbjct: 366 RGLDPQSHRPL 398
Score = 116 bits (247), Expect = 7e-025
Identities = 53/144 (36%), Positives = 76/144 (52%)
Frame = -2 / -3
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G G AV+ L++ +G+G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 440 GQRGAGRVAVVRLAEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAEQ 261
Query: 506 SVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEF 327
V+ DDE F E +L++ Q+VYP +P L A +P G RAPA A+ V E
Sbjct: 260 GVEFDDEFVFFF*EVSTLQIRTQVVYPSEPAALPAAHQPCGLGKRAPATFAVSSNVGDEA 81
Query: 326 LILLRGPEPLSQLLLVAARMPPHL 255
++L GP P + A PHL
Sbjct: 80 IVLFFGPRPFVCMSFFTAERSPHL 9
Score = 94.5 bits (200), Expect = 2e-018
Identities = 49/96 (51%), Positives = 53/96 (55%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS P +F LM F F ISLSV PG+ AI DHL P S
Sbjct: 394 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLMMSSSSSSEKF 215
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIH SLQLFP SPA+LG+E QQP P
Sbjct: 214 PRFRSGRR*FIHRSLQLFPQRISPAALGSERQQPSP 107
Score = 40.0 bits (81), Expect(2) = 2e-005
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +2 / +2
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
DGE FLL ++ ++ + G H H+ + LL L SQ R A +R+EL A +DKL
Sbjct: 11 DGEIFLL*KSSYKQRGVDQRRGRSPHRPHSNSRRRLLALASQGRRADALREELQAPMDKL 190
Score = 37.3 bits (75), Expect = 0.39
Identities = 23/60 (38%), Positives = 27/60 (45%)
Frame = +1 / +1
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RWG + A +G GP +R S T + A AGA FP G A R G G*T
Sbjct: 10 RWGDLSAVKKLIQTKGRGPKKRTIASSPTFELTAKVAGARFPRPQG*CAAGRAAGSDG*T 189
Score = 29.5 bits (58), Expect(2) = 2e-005
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C AR D D+E +E HQE+
Sbjct: 269 QQVVSYCRQIARADGQRDKELLEYSHQEK 355
>gb|DR060728.1|DR060728 RTNIT1_29_D06.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_29_D06_A029 5', mRNA sequence
Length = 726
Score = 230 bits (497), Expect = 2e-059
Identities = 84/131 (64%), Positives = 107/131 (81%)
Frame = +3 / +2
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
++MGR CC K KG W+ EED++L+ HI HG GCW S+PK AGL RCGKSCRLRWI
Sbjct: 20 LKMGRSPCCEKAHTNKGGWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWI 199
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
NYLRPDLKRG F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL
Sbjct: 200 NYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLN 379
Query: 612 KGIDPNTHKPL 644
+G+DP +H+PL
Sbjct: 380 RGLDPQSHRPL 412
Score = 115 bits (246), Expect = 1e-024
Identities = 54/148 (36%), Positives = 77/148 (52%)
Frame = -2 / -3
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G G AV+ L++ +G+G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 454 GQRGAGRVAVVRLAEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAEQ 275
Query: 506 SVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEF 327
V+ DDE F E +L++ Q+VYP +P L A +P G RAPA A+ V E
Sbjct: 274 GVEFDDEFVFFF*EVSTLQIRTQVVYPSEPAALPAAHQPCGLGKRAPATFAVSSNVGDEA 95
Query: 326 LILLRGPEPLSQLLLVAARMPPHLNAMQ 243
++L GP P + A PHL Q
Sbjct: 94 IVLFFGPPPFVCMSFFTAGRSPHLQYTQ 11
Score = 94.5 bits (200), Expect = 2e-018
Identities = 49/96 (51%), Positives = 53/96 (55%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS P +F LM F F ISLSV PG+ AI DHL P S
Sbjct: 408 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLMMSSSSSSEKF 229
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIH SLQLFP SPA+LG+E QQP P
Sbjct: 228 PRFRSGRR*FIHRSLQLFPQRISPAALGSERQQPSP 121
Score = 42.8 bits (87), Expect(2) = 3e-006
Identities = 25/65 (38%), Positives = 30/65 (46%)
Frame = +1 / +3
Query: 241 FCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG 420
FC+ RWG + A +G GP +R S T + A AGA FP G A R G
Sbjct: 9 FCVY*RWGDLPAVKKLIQTKGGGPKKRTIASSPTFELTAKVAGARFPRPQG*CAAGRAAG 188
Query: 421 *GG*T 435
G*T
Sbjct: 189 SDG*T 203
Score = 29.5 bits (58), Expect(2) = 3e-006
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C AR D D+E +E HQE+
Sbjct: 283 QQVVSYCRQIARADGQRDKELLEYSHQEK 369
>gb|DR111301.1|DR111301 RTS1_16_F03.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_16_F03_A029 5', mRNA sequence
Length = 729
Score = 229 bits (494), Expect = 6e-059
Identities = 89/130 (68%), Positives = 101/130 (77%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
EMGR CC K KG W+ EED +L+ HI HG G W S+PK AGL RCGKSCRLRWIN
Sbjct: 11 EMGRSPCCEKAHTNKGAWTKEEDRRLIAHIRAHGEGGWRSLPKAAGLLRCGKSCRLRWIN 190
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
YLRPDLKRG F ++E++LII+LHAVLGN+WS IA +L GRTDNEIKN WNS IKKKL K
Sbjct: 191 YLRPDLKRGGFTEEEDELIIKLHAVLGNKWSLIAGRLAGRTDNEIKNYWNSHIKKKLLSK 370
Query: 615 GIDPNTHKPL 644
G+DP TH PL
Sbjct: 371 GLDPKTHCPL 400
Score = 119 bits (255), Expect = 6e-026
Identities = 57/96 (59%), Positives = 61/96 (63%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G WVLGS P +FFLM F F ISLSV P + AI DHLFPRTAC S
Sbjct: 396 GQWVLGSSPLLSNFFLM*LFQ*FFISLSVRPANLPAIRDHLFPRTACNLMISSSSSSVKP 217
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL +PA+LG E Q P P
Sbjct: 216 PRLRSGRR*FIHRSLQLFPHLSNPAALGRERQPPSP 109
Score = 92.7 bits (196), Expect = 8e-018
Identities = 46/135 (34%), Positives = 68/135 (50%)
Frame = -2 / -3
Query: 659 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 480
V+ L++ VG+G+ + Q LLD VP +L L++S P Q CN RP V ++ + DD
Sbjct: 415 VVGLAEGTVGLGVESLA*QFLLDVTVPVVLYLVVSSPCQSPCNKRPLVSKNCM*FDD*FV 236
Query: 479 FVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEP 300
GE +LE+ Q+VYP +P LSA +P G PA + + E + P
Sbjct: 235 LFFGEASTLEIRTQVVYPSEPAALSASQQPCGLGKGTPATFTVGSNMGDEAAVFFFSPGT 56
Query: 299 LSQLLLVAARMPPHL 255
+ L+AA HL
Sbjct: 55 FVGMSLLAAGRSSHL 11
Score = 29.0 bits (57), Expect(2) = 1.2
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHP 634
+QVVS C R +* D+E +E HQEE + Q P
Sbjct: 271 KQVVSYCREIGRAN*QRDKELLEQSHQEEIAKQGTRPQDP 390
Score = 24.0 bits (46), Expect(2) = 1.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ R +++RKEL A +DKL
Sbjct: 133 SQGRRVAEMRKELQAPMDKL 192
>gb|DR117116.1|DR117116 RTMG1_4_G10.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_4_G10_A029 5', mRNA sequence
Length = 805
Score = 229 bits (494), Expect = 6e-059
Identities = 84/137 (61%), Positives = 108/137 (78%)
Frame = +3 / +1
Query: 249 CVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRW 428
C +MGR CC K KG W+ +ED++L+ HI HG G W S+PK AGL RCGKSCRLRW
Sbjct: 13 CEKMGRSPCCEKAHTNKGAWTKQEDDRLIAHIRAHGEGGWRSLPKAAGLLRCGKSCRLRW 192
Query: 429 INYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 608
INYLRPDLKRG+F ++E++LII+LH+ +GN+WS IA +LPGRTDNEIKN WN+ IK+KL
Sbjct: 193 INYLRPDLKRGSFTEEEDELIIKLHSFVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLL 372
Query: 609 QKGIDPNTHKPLTEADH 659
KG+DP TH+PL + ++
Sbjct: 373 SKGLDPQTHRPLGQPNN 423
Score = 110 bits (234), Expect = 5e-023
Identities = 48/135 (35%), Positives = 73/135 (54%)
Frame = -2 / -2
Query: 659 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 480
++ L++W +G+G+ + Q D VP +L L++ P Q CN RP V + V+ DDE+
Sbjct: 423 IVWLAEWTMGLGVESLAQQFSFDVCVPVVLYLVVRPSGQSPCN*RPLVANEGVEFDDELV 244
Query: 479 FVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEP 300
F E +L++ Q+VYP Q L+A +P G R PA A+ V + +I L P P
Sbjct: 243 FFFREASTLQIGTQVVYPSQSAALAASQQPCGLGKRTPAPFAVGSNVSDKAVIFLFSPGP 64
Query: 299 LSQLLLVAARMPPHL 255
+ L+ AR PHL
Sbjct: 63 FVSMSLLTARRSPHL 19
Score = 101 bits (215), Expect = 2e-020
Identities = 51/97 (52%), Positives = 54/97 (55%)
Frame = -3 / -3
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
SG WV GS P +F LM F F ISLSV PG+ AI DHL P S
Sbjct: 407 SGRWVWGSSPLLSNFLLMCVFQ*FFISLSVRPGNLPAIKDHLLPTKEWSLMMSSSSSSVK 228
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIH SLQL PHL SPA+LG E Q P P
Sbjct: 227 LPRFRSGRR*FIHRSLQLLPHLSSPAALGRERQPPSP 117
Score = 32.2 bits (64), Expect(2) = 0.003
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +1 / +2
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RWG + A +G G ++M +T + A AG LFP G A R G*T
Sbjct: 20 RWGDLRAVRRLILTKGPGLNKKMTALSLTFEPTAKGAGVLFPRPQGC*DAARAADCDG*T 199
Score = 29.9 bits (59), Expect(2) = 0.003
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQAT 643
+QVV NC AR D D+E +E HQ++ + +P +T
Sbjct: 279 QQVVFNCREIARTDGQRDKELLEHTHQKKIAEQGTRPPNPSST 407
>gb|BX681391.1|BX681391 BX681391 RS Pinus pinaster cDNA clone RS58C06, mRNA sequence
Length = 605
Score = 228 bits (493), Expect = 9e-059
Identities = 83/128 (64%), Positives = 104/128 (81%)
Frame = +3 / +3
Query: 261 GRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 440
GR CC K KG W+ EED++L+ HI HG GCW S+PK AGL RCGKSCRLRWINYL
Sbjct: 3 GRSPCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINYL 182
Query: 441 RPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGI 620
RPDLKRG F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL +G+
Sbjct: 183 RPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGL 362
Query: 621 DPNTHKPL 644
DP +H+PL
Sbjct: 363 DPQSHRPL 386
Score = 105 bits (224), Expect = 1e-021
Identities = 50/142 (35%), Positives = 73/142 (51%)
Frame = -2 / -1
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G G AV+ L++ + +G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 428 GHRGADSVAVVRLAEGAMRLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAE* 249
Query: 506 SVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEF 327
V+ DDE F E +L++ Q+VYP +P L A +P G RAPA A+ V E
Sbjct: 248 GVEFDDEFVFFF*EVSTLQIRTQVVYPSEPAALPAAHQPCGLGKRAPATFAVSSNVSDEA 69
Query: 326 LILLRGPEPLSQLLLVAARMPP 261
++L GP P + A P
Sbjct: 68 IVLFFGPRPFVCMSFFTAGRSP 3
Score = 90.0 bits (190), Expect = 5e-017
Identities = 47/91 (51%), Positives = 51/91 (56%)
Frame = -3 / -2
Query: 625 GSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRS 446
GS P +F LM F F ISLSV PG+ AI DHL P S P RS
Sbjct: 367 GSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLMMSSSSSSEKFPRFRS 188
Query: 445 GLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
G R*FIH SLQLFP SPA+LG+E QQP P
Sbjct: 187 GRR*FIHRSLQLFPQRISPAALGSERQQPSP 95
Score = 36.8 bits (74), Expect(2) = 2e-004
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +1 / +1
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
WG + A +G GP +R S +T + A AGA FP G A R G G*T
Sbjct: 1 WGDLPAVKKLIQTKGRGPKKRTIASSLTFELTAKVAGARFPRPQG*CAAGRAAGSDG*T 177
Score = 35.9 bits (72), Expect = 1.0
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +2 / +2
Query: 260 GEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
GE LL ++ ++ + G H SH+ + LL L SQ R A +R+EL A +DKL
Sbjct: 2 GEISLL*KSSYKQRGVDQRRGRSPHRSHSNSRRRLLALASQGRRADALREELQAPMDKL 178
Score = 29.5 bits (58), Expect(2) = 2e-004
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C AR D D+E +E HQE+
Sbjct: 257 QQVVSYCRQIARADGQRDKELLEYSHQEK 343
>gb|BF517838.1|BF517838 NXSI_027_G09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_027_G09 5' similar to Arabidopsis thaliana
sequence At4g38620 putative transcription factor (MYB4)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 494
Score = 228 bits (492), Expect = 1e-058
Identities = 84/138 (60%), Positives = 108/138 (78%)
Frame = +3 / +3
Query: 231 SSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGK 410
++ L ++MGR CC K KG W+ EED++L+ HI HG GCW S+PK AGL RCGK
Sbjct: 66 AASFLCVLKMGRSPCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGK 245
Query: 411 SCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSC 590
SCRLRWINYLRPDLKRG +++E++LII+LH++LGN+WS IA LPGRTDNEIKN WN+
Sbjct: 246 SCRLRWINYLRPDLKRGNXSEEEDELIIKLHSLLGNKWSLIAXXLPGRTDNEIKNYWNTH 425
Query: 591 IKKKLRQKGIDPNTHKPL 644
IK+KL +G+DP +H+PL
Sbjct: 426 IKRKLLNRGLDPQSHRPL 479
Score = 105 bits (225), Expect = 8e-022
Identities = 49/139 (35%), Positives = 71/139 (51%)
Frame = -2 / -1
Query: 659 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 480
V+ + +G+G+ + + Q LD +P +L L++ PP Q CN RP V E V+ DDE
Sbjct: 494 VVRXXEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSXCNKRPLVAEQGVEFDDEFV 315
Query: 479 FVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEP 300
F +L++ Q+VYP +P L A +P G RAPA A+ V E ++L GP P
Sbjct: 314 FFF*XVSTLQIRTQVVYPSEPAALPAAHQPCGLGKRAPATFAVSSNVGDEAIVLFFGPRP 135
Query: 299 LSQLLLVAARMPPHLNAMQ 243
+ A PHL Q
Sbjct: 134 FVCMSFFTAGRSPHLQYTQ 78
Score = 94.1 bits (199), Expect = 3e-018
Identities = 49/96 (51%), Positives = 53/96 (55%)
Frame = -3 / -2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS P +F LM F F ISLSV PG+ AI DHL P S
Sbjct: 475 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNXXAIRDHLLPSREWSLMMSSSSSSEXF 296
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIH SLQLFP SPA+LG+E QQP P
Sbjct: 295 PRFRSGRR*FIHRSLQLFPQRISPAALGSERQQPSP 188
Score = 42.3 bits (86), Expect(2) = 3e-006
Identities = 25/65 (38%), Positives = 30/65 (46%)
Frame = +1 / +1
Query: 241 FCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG 420
FC+ RWG + A +G GP +R S T + A AGA FP G A R G
Sbjct: 76 FCVY*RWGDLPAVKKLIQTKGRGPKKRTIASSPTFELTAKVAGARFPRPQG*CAAGRAAG 255
Query: 421 *GG*T 435
G*T
Sbjct: 256 SDG*T 270
Score = 30.4 bits (60), Expect(2) = 3e-006
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C AR D D+E +E HQE+
Sbjct: 350 QQVVSYCXXIARADGQRDKELLEYSHQEK 436
>gb|CO200901.1|CO200901 RTCNT2_2_G06.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_2_G06_A029 3', mRNA sequence
Length = 863
Score = 228 bits (492), Expect = 1e-058
Identities = 84/134 (62%), Positives = 105/134 (78%)
Frame = +3 / -3
Query: 243 LHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRL 422
L +MGR CC K KG W+ EED++L+ HI HG GCW S+P AGL RCGKSCRL
Sbjct: 840 LSLCQMGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPTAAGLLRCGKSCRL 661
Query: 423 RWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
RWINYLRPD+KRG F+ +E++LII+LH+++GN+WS IAA+LPGRTDNEIKN WNS IK+K
Sbjct: 660 RWINYLRPDIKRGNFSSEEDELIIQLHSLIGNKWSLIAAKLPGRTDNEIKNYWNSHIKRK 481
Query: 603 LRQKGIDPNTHKPL 644
L +G DP +H+PL
Sbjct: 480 LVSRGFDPGSHRPL 439
Score = 99.6 bits (211), Expect = 7e-020
Identities = 45/131 (34%), Positives = 68/131 (51%)
Frame = -2 / +1
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
+G G+ + Q LD +P +LDL++ P Q CN RP V + ++LDDE+ F E +
Sbjct: 448 MGPGVESPAHQFSLDVGIPVVLDLVVRPSGQFCCNQRPLVSDKGMKLDDELIFF**EVST 627
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVA 276
L++ Q++YP +P LS +P G R P A ++ V E ++ GP P + A
Sbjct: 628 LDIRTQVIYPSEPAALSTSQQPCGRGKRTPTAFSVGSNVSDEAVVFFFGPRPFVCMSFFA 807
Query: 275 ARMPPHLNAMQ 243
A PHL Q
Sbjct: 808 AGRSPHLTQRQ 840
Score = 58.8 bits (122), Expect(2) = 3e-018
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = -3 / +2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
G W GS P +F LM EF FLISLSV PG+ AAI DHLFP
Sbjct: 443 GRWDPGSNPLLTNFLLMWEFQ*FLISLSVRPGNFAAIRDHLFP 571
Score = 54.7 bits (113), Expect(2) = 3e-018
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -3 / +2
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P L SG +*FIH SLQLFPH SPA++G+E QQP P
Sbjct: 623 PRLISGRK*FIHRSLQLFPHRSSPAAVGSERQQPSP 730
Score = 35.0 bits (70), Expect(2) = 0.002
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2 / -2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS+CS AR D DQE +E HQE+
Sbjct: 568 KQVVSDCSKIARTDGQRDQELLEFPHQEK 482
Score = 27.6 bits (54), Expect(2) = 0.002
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2 / -2
Query: 332 HESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
H SH+ LL S R A+ + KEL A +DKL
Sbjct: 751 HRSHSSPRRRLLAFASHGRRAAAMWKELQAPMDKL 647
>gb|DR161238.1|DR161238 RTFE1_10_D10.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_10_D10_A029 5', mRNA sequence
Length = 766
Score = 226 bits (489), Expect = 3e-058
Identities = 83/135 (61%), Positives = 107/135 (79%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K KG W+ +ED++L+ HI HG G W S+PK AGL RCGKSCRLRWIN
Sbjct: 18 KMGRSPCCEKAHTNKGAWTKQEDDRLIAHIRAHGEGSWRSLPKAAGLLRCGKSCRLRWIN 197
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
YLRPDLKRG+F ++E++LII+LH+ +GN+WS IA +LPGRTDNEIKN WN+ IK+KL K
Sbjct: 198 YLRPDLKRGSFTEEEDELIIKLHSFVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSK 377
Query: 615 GIDPNTHKPLTEADH 659
G+DP TH+PL + ++
Sbjct: 378 GLDPQTHRPLGQPNN 422
Score = 111 bits (236), Expect = 2e-023
Identities = 47/136 (34%), Positives = 74/136 (54%)
Frame = -2 / -3
Query: 659 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 480
++ L++W +G+G+ + Q D VP +L L++ P Q CN RP + + V+ DDE+
Sbjct: 422 IVWLAEWTMGLGVESLAQQFSFDVCVPVVLYLVVRPSGQSPCN*RPLIANEGVEFDDELV 243
Query: 479 FVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEP 300
F E +L++ Q+VYP Q L+A +P G R PA A+ V + +I L P P
Sbjct: 242 FFFREASTLQIGTQVVYPSQSAALAASQQPCGLGKRTPAPFAVGSNVSDKAVIFLFSPSP 63
Query: 299 LSQLLLVAARMPPHLN 252
+ L+ AR PHL+
Sbjct: 62 FVSMSLLTARRSPHLS 15
Score = 100 bits (214), Expect = 3e-020
Identities = 51/97 (52%), Positives = 54/97 (55%)
Frame = -3 / -1
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
SG WV GS P +F LM F F ISLSV PG+ AI DHL P S
Sbjct: 406 SGRWVWGSSPLLSNFLLMCVFQ*FFISLSVRPGNLPAIKDHLLPTKEWSLMMSSSSSSVK 227
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIH SLQL PHL SPA+LG E Q P P
Sbjct: 226 LPRFRSGRR*FIHRSLQLLPHLSSPAALGRERQLPSP 116
Score = 31.8 bits (63), Expect(2) = 0.032
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +1 / +1
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RWG + A +G G ++M +T + A AG LFP G A R G*T
Sbjct: 19 RWGDLRAVRRLILTKGLGLNKKMTALSLTFEPTAKGAGVLFPRPQGC*DAARAADCDG*T 198
Score = 26.7 bits (52), Expect(2) = 0.032
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2 / +2
Query: 521 VVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQAT 643
VV NC AR D D+E +E HQ++ + +P +T
Sbjct: 284 VVFNCREIARTDGQRDKELLEHTHQKKIAEQGTRPPNPSST 406
>gb|AW011253.1|AW011253 ST18F02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST18F02, mRNA sequence
Length = 578
Score = 225 bits (485), Expect = 1e-057
Identities = 83/130 (63%), Positives = 106/130 (81%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K KG WS +EDE L+ +I HG G W S+PK AGLQRCGKSCRLRWIN
Sbjct: 14 QMGRAPCCEKTHTNKGAWSKDEDEALVAYIQAHGEGSWRSLPKAAGLQRCGKSCRLRWIN 193
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
YLRPDLKRG F+ +E+++II+LH++LGN+WS IA++LPGRTDNEIKN WN+ IK+K+ ++
Sbjct: 194 YLRPDLKRGNFSPEEDEIIIKLHSMLGNKWSLIASKLPGRTDNEIKNYWNTHIKRKMLER 373
Query: 615 GIDPNTHKPL 644
G+DP+TH PL
Sbjct: 374 GLDPSTHLPL 403
Score = 97.7 bits (207), Expect = 2e-019
Identities = 50/100 (50%), Positives = 55/100 (55%)
Frame = -3 / -3
Query: 652 ASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXS 473
+ + G WV GS P F LM F F ISLSV PG+ AI DHL P S
Sbjct: 411 SDIKGRWVEGSRPLSNIFLLM*VFQ*FFISLSVRPGNLLAIKDHLLPNIE*SLIMISSSS 232
Query: 472 WANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIHLSLQL PH +PA+LG E Q P P
Sbjct: 231 GLKLPRLRSGRR*FIHLSLQLLPHRCNPAALGRERQLPSP 112
Score = 85.8 bits (181), Expect = 9e-016
Identities = 40/114 (35%), Positives = 58/114 (50%)
Frame = -2 / -2
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
L+ VP IL LII PWQ C+ RP V + ++ D+++ F E EV +I+YP +P
Sbjct: 355 LNVSVPVILYLIICSPWQFACDQRPLVTQHRMKFDNDLIFFWAEIAPFEVRTEIIYPSKP 176
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
+ PL+PS G P A +M + +E I + P + AAR HL
Sbjct: 175 AAFATPLQPSGLGKGTPTAFSMGLNICNECFIFIFTPGAFVCMGFFAARSSTHL 14
Score = 32.2 bits (64), Expect(2) = 0.044
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1 / +3
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
+W +LAA + G +M++S + M A G FP LG G + G G*
Sbjct: 15 KWVELLAAKKPIQTKAPGVKMKMKHSLHIFKPMEKAVGVPFPRPLGCSGVAKAAGLDG*I 194
Query: 436 I 438
I
Sbjct: 195 I 197
Score = 25.8 bits (50), Expect(2) = 0.044
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 535 QRSCQGGLIMRSRIYGTRASR 597
Q +CQG IMR RI GT R
Sbjct: 294 QANCQGEQIMR*RITGTLTLR 356
>gb|CF393225.1|CF393225 RTDR3_17_D12.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_17_D12_A022 5', mRNA
sequence
Length = 659
Score = 225 bits (485), Expect = 1e-057
Identities = 85/134 (63%), Positives = 103/134 (76%)
Frame = +3 / +1
Query: 240 VLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCR 419
+L C MGR CC KG W+ EED++L +I HG GCW S+PK AGL RCGKSCR
Sbjct: 25 LLLC*TMGRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCR 204
Query: 420 LRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKK 599
LRWINYLRPDLKRG F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+
Sbjct: 205 LRWINYLRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKR 384
Query: 600 KLRQKGIDPNTHKP 641
KL G+DP T +P
Sbjct: 385 KLISMGVDPLTRRP 426
Score = 108 bits (230), Expect = 2e-022
Identities = 54/97 (55%), Positives = 57/97 (58%)
Frame = -3 / -1
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC S
Sbjct: 428 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEK 249
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIHLSLQLFPH PA+LG E Q P P
Sbjct: 248 PPRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP 138
Score = 95.0 bits (201), Expect = 2e-018
Identities = 41/129 (31%), Positives = 68/129 (52%)
Frame = -2 / -3
Query: 644 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 465
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+ +
Sbjct: 429 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFIFRK 250
Query: 464 CPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLL 285
S ++ +I+YP QP T S P + G R PA+ +M ++ + +IL GP L+ +
Sbjct: 249 TSSFQIRSKIIYPSQPATFSTPKQTCGLGERTPASFSMSLNILGKPVILFLGPGSLASVT 70
Query: 284 LVAARMPPH 258
+ AR H
Sbjct: 69 VGTARRSSH 43
>gb|CO367178.1|CO367178 RTK1_32_E03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_E03_A029 5', mRNA sequence
Length = 873
Score = 224 bits (484), Expect = 1e-057
Identities = 85/133 (63%), Positives = 102/133 (76%)
Frame = +3 / +1
Query: 243 LHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRL 422
L C MGR CC KG W+ EED++L +I HG GCW S+PK AGL RCGKSCRL
Sbjct: 1 LLC*TMGRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRL 180
Query: 423 RWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
RWINYLRPDLKRG F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+K
Sbjct: 181 RWINYLRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRK 360
Query: 603 LRQKGIDPNTHKP 641
L G+DP T +P
Sbjct: 361 LISMGVDPLTRRP 399
Score = 108 bits (230), Expect = 2e-022
Identities = 54/97 (55%), Positives = 57/97 (58%)
Frame = -3 / -2
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC S
Sbjct: 401 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEK 222
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIHLSLQLFPH PA+LG E Q P P
Sbjct: 221 PPRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP 111
Score = 95.0 bits (201), Expect = 2e-018
Identities = 41/129 (31%), Positives = 68/129 (52%)
Frame = -2 / -1
Query: 644 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 465
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+ +
Sbjct: 402 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFIFRK 223
Query: 464 CPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLL 285
S ++ +I+YP QP T S P + G R PA+ +M ++ + +IL GP L+ +
Sbjct: 222 TSSFQIRSKIIYPSQPATFSTPKQTCGLGERTPASFSMSLNILGKPVILFLGPGSLASVT 43
Query: 284 LVAARMPPH 258
+ AR H
Sbjct: 42 VGTARRSSH 16
>gb|CF472757.1|CF472757 RTDS1_11_D09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_11_D09_A015 5', mRNA sequence
Length = 667
Score = 222 bits (479), Expect = 7e-057
Identities = 83/128 (64%), Positives = 100/128 (78%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC KG W+ EED++L +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 14 MGRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 193
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G
Sbjct: 194 LRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMG 373
Query: 618 IDPNTHKP 641
+DP T +P
Sbjct: 374 VDPLTRRP 397
Score = 108 bits (230), Expect = 2e-022
Identities = 54/97 (55%), Positives = 57/97 (58%)
Frame = -3 / -2
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC S
Sbjct: 399 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEK 220
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIHLSLQLFPH PA+LG E Q P P
Sbjct: 219 PPRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP 109
Score = 95.0 bits (201), Expect = 2e-018
Identities = 41/129 (31%), Positives = 68/129 (52%)
Frame = -2 / -1
Query: 644 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 465
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+ +
Sbjct: 400 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFIFRK 221
Query: 464 CPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLL 285
S ++ +I+YP QP T S P + G R PA+ +M ++ + +IL GP L+ +
Sbjct: 220 TSSFQIRSKIIYPSQPATFSTPKQTCGLGERTPASFSMSLNILGKPVILFLGPGSLASVT 41
Query: 284 LVAARMPPH 258
+ AR H
Sbjct: 40 VGTARRSSH 14
>gb|DR023090.1|DR023090 STRS1_55_A05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_55_A05_A034 5', mRNA sequence
Length = 752
Score = 222 bits (479), Expect = 7e-057
Identities = 83/128 (64%), Positives = 100/128 (78%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC KG W+ EED++L +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 21 MGRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 200
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G
Sbjct: 201 LRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMG 380
Query: 618 IDPNTHKP 641
+DP T +P
Sbjct: 381 VDPLTRRP 404
Score = 108 bits (230), Expect = 2e-022
Identities = 54/97 (55%), Positives = 57/97 (58%)
Frame = -3 / -2
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC S
Sbjct: 406 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEK 227
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIHLSLQLFPH PA+LG E Q P P
Sbjct: 226 PPRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP 116
Score = 95.0 bits (201), Expect = 2e-018
Identities = 41/129 (31%), Positives = 68/129 (52%)
Frame = -2 / -1
Query: 644 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 465
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+ +
Sbjct: 407 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFIFRK 228
Query: 464 CPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLL 285
S ++ +I+YP QP T S P + G R PA+ +M ++ + +IL GP L+ +
Sbjct: 227 TSSFQIRSKIIYPSQPATFSTPKQTCGLGERTPASFSMSLNILGKPVILFLGPGSLASVT 48
Query: 284 LVAARMPPH 258
+ AR H
Sbjct: 47 VGTARRSSH 21
>gb|DR161451.1|DR161451 RTFE1_11_H03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_11_H03_A029 5', mRNA sequence
Length = 669
Score = 222 bits (479), Expect = 7e-057
Identities = 83/128 (64%), Positives = 100/128 (78%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC KG W+ EED++L +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 21 MGRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 200
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G
Sbjct: 201 LRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMG 380
Query: 618 IDPNTHKP 641
+DP T +P
Sbjct: 381 VDPLTRRP 404
Score = 108 bits (230), Expect = 2e-022
Identities = 54/97 (55%), Positives = 57/97 (58%)
Frame = -3 / -3
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC S
Sbjct: 406 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEK 227
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIHLSLQLFPH PA+LG E Q P P
Sbjct: 226 PPRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP 116
Score = 95.0 bits (201), Expect = 2e-018
Identities = 41/129 (31%), Positives = 68/129 (52%)
Frame = -2 / -2
Query: 644 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 465
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+ +
Sbjct: 407 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFIFRK 228
Query: 464 CPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLL 285
S ++ +I+YP QP T S P + G R PA+ +M ++ + +IL GP L+ +
Sbjct: 227 TSSFQIRSKIIYPSQPATFSTPKQTCGLGERTPASFSMSLNILGKPVILFLGPGSLASVT 48
Query: 284 LVAARMPPH 258
+ AR H
Sbjct: 47 VGTARRSSH 21
>gb|CF388652.1|CF388652 RTDR2_4_A10.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_4_A10_A021 5', mRNA
sequence
Length = 760
Score = 221 bits (478), Expect = 1e-056
Identities = 83/131 (63%), Positives = 105/131 (80%)
Frame = +3 / +1
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
++MGR CC K KG W+ EED +L+ +I +G G W S+PK AGL RCGKSCRLRWI
Sbjct: 19 MKMGRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWI 198
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
NYLRPDLKRG+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL
Sbjct: 199 NYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLI 378
Query: 612 KGIDPNTHKPL 644
KGIDP +H+PL
Sbjct: 379 KGIDPQSHRPL 411
Score = 117 bits (251), Expect = 2e-025
Identities = 54/141 (38%), Positives = 78/141 (55%)
Frame = -2 / -2
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 441 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 262
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DDE F E +LE+ Q+VYP QPT LSA +P G PAA A+ V +E ++
Sbjct: 261 DDEFVFFFCEASTLEIGTQVVYPSQPTALSASRQPCSLGKGTPAAFAVGSNVSNEAVVFF 82
Query: 314 RGPEPLSQLLLVAARMPPHLN 252
P P + L+AA HL+
Sbjct: 81 FCPGPFVGMSLLAAGRSSHLH 19
Score = 103 bits (220), Expect = 4e-021
Identities = 52/96 (54%), Positives = 56/96 (58%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 407 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 228
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL SPA+LG E Q P P
Sbjct: 227 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSP 120
Score = 40.0 bits (81), Expect(2) = 3e-004
Identities = 23/60 (38%), Positives = 30/60 (50%)
Frame = +1 / +2
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RW + AA +G G ++ S +T + A AAG FP G + AER VG G*T
Sbjct: 23 RWEDLPAARRLIPTKGPGQKKKTTASLLTFEPTAKAAGVPFPRLQGCRDAERAVGCDG*T 202
Score = 25.4 bits (49), Expect(2) = 9.3
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 302 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 400
Score = 25.4 bits (49), Expect(2) = 3e-004
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 282 QQVVSYCRKIAGADGQRDKELLEHSHQEK 368
Score = 24.4 bits (47), Expect(2) = 9.3
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 144 SQGCRAAEMRKEL*AAMDKL 203
>gb|DR111427.1|DR111427 RTS1_17_F02.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_17_F02_A029 5', mRNA sequence
Length = 630
Score = 221 bits (478), Expect = 1e-056
Identities = 83/131 (63%), Positives = 105/131 (80%)
Frame = +3 / +2
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
++MGR CC K KG W+ EED +L+ +I +G G W S+PK AGL RCGKSCRLRWI
Sbjct: 5 MKMGRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWI 184
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
NYLRPDLKRG+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL
Sbjct: 185 NYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLI 364
Query: 612 KGIDPNTHKPL 644
KGIDP +H+PL
Sbjct: 365 KGIDPQSHRPL 397
Score = 117 bits (251), Expect = 2e-025
Identities = 54/141 (38%), Positives = 78/141 (55%)
Frame = -2 / -3
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 427 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 248
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DDE F E +LE+ Q+VYP QPT LSA +P G PAA A+ V +E ++
Sbjct: 247 DDEFVFFFCEASTLEIGTQVVYPSQPTALSASRQPCSLGKGTPAAFAVGSNVSNEAVVFF 68
Query: 314 RGPEPLSQLLLVAARMPPHLN 252
P P + L+AA HL+
Sbjct: 67 FCPGPFVGMSLLAAGRSSHLH 5
Score = 103 bits (220), Expect = 4e-021
Identities = 52/96 (54%), Positives = 56/96 (58%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 393 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 214
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL SPA+LG E Q P P
Sbjct: 213 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSP 106
Score = 40.0 bits (81), Expect(2) = 3e-004
Identities = 23/60 (38%), Positives = 30/60 (50%)
Frame = +1 / +3
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RW + AA +G G ++ S +T + A AAG FP G + AER VG G*T
Sbjct: 9 RWEDLPAARRLIPTKGPGQKKKTTASLLTFEPTAKAAGVPFPRLQGCRDAERAVGCDG*T 188
Score = 25.4 bits (49), Expect(2) = 9.5
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / +3
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 288 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 386
Score = 25.4 bits (49), Expect(2) = 3e-004
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 268 QQVVSYCRKIAGADGQRDKELLEHSHQEK 354
Score = 24.4 bits (47), Expect(2) = 9.5
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 130 SQGCRAAEMRKEL*AAMDKL 189
>gb|DR387774.1|DR387774 RTHG1_24_B11.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_24_B11_A029 3', mRNA sequence
Length = 781
Score = 221 bits (478), Expect = 1e-056
Identities = 83/131 (63%), Positives = 105/131 (80%)
Frame = +3 / -3
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
++MGR CC K KG W+ EED +L+ +I +G G W S+PK AGL RCGKSCRLRWI
Sbjct: 773 MKMGRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWI 594
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
NYLRPDLKRG+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL
Sbjct: 593 NYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLI 414
Query: 612 KGIDPNTHKPL 644
KGIDP +H+PL
Sbjct: 413 KGIDPQSHRPL 381
Score = 117 bits (251), Expect = 2e-025
Identities = 54/141 (38%), Positives = 78/141 (55%)
Frame = -2 / +3
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 351 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 530
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DDE F E +LE+ Q+VYP QPT LSA +P G PAA A+ V +E ++
Sbjct: 531 DDEFVFFFCEASTLEIGTQVVYPSQPTALSASRQPCSLGKGTPAAFAVGSNVSNEAVVFF 710
Query: 314 RGPEPLSQLLLVAARMPPHLN 252
P P + L+AA HL+
Sbjct: 711 FCPGPFVGMSLLAAGRSSHLH 773
Score = 103 bits (220), Expect = 4e-021
Identities = 52/96 (54%), Positives = 56/96 (58%)
Frame = -3 / +1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 385 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 564
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL SPA+LG E Q P P
Sbjct: 565 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSP 672
Score = 40.0 bits (81), Expect(2) = 3e-004
Identities = 23/60 (38%), Positives = 30/60 (50%)
Frame = +1 / -1
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RW + AA +G G ++ S +T + A AAG FP G + AER VG G*T
Sbjct: 769 RWEDLPAARRLIPTKGPGQKKKTTASLLTFEPTAKAAGVPFPRLQGCRDAERAVGCDG*T 590
Score = 25.4 bits (49), Expect(2) = 9.3
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / -1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 490 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 392
Score = 25.4 bits (49), Expect(2) = 3e-004
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / -2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 510 QQVVSYCRKIAGADGQRDKELLEHSHQEK 424
Score = 24.4 bits (47), Expect(2) = 9.3
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / -2
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 648 SQGCRAAEMRKEL*AAMDKL 589
>gb|DR694707.1|DR694707 EST1084799 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEF89 3' end, mRNA sequence
Length = 790
Score = 221 bits (478), Expect = 1e-056
Identities = 86/110 (78%), Positives = 94/110 (85%)
Frame = +3 / +2
Query: 321 DEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIEL 500
D KL+N IT HGHGCW VPKLAGL RCGKSCRLRW NYLRPDLKRG ++ EE LII+L
Sbjct: 2 DRKLVNFITLHGHGCWREVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSESEEKLIIDL 181
Query: 501 HAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTE 650
HA +GNRWS+IAAQLPGRTDNEIKN WN+ IKKKLRQ GIDP THKPLT+
Sbjct: 182 HAAIGNRWSRIAAQLPGRTDNEIKNYWNTRIKKKLRQMGIDPVTHKPLTQ 331
Score = 132 bits (283), Expect = 8e-030
Identities = 58/102 (56%), Positives = 66/102 (64%)
Frame = -3 / -2
Query: 646 VSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWA 467
V GLWV GS+P SFFL+ F FLISLSVLPG+CAAI DHLFP AC
Sbjct: 327 VRGLWVTGSIPIWRSFFLILVFQ*FLISLSVLPGNCAAIRDHLFPMAACRSMMSFSSDSD 148
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
N P +SG +*F+ +LQL PHL PASLGT Q PWPC V+
Sbjct: 147 NNPRFKSGRK*FVQRNLQLLPHLSRPASLGTSRQHPWPCRVI 22
Score = 104 bits (222), Expect = 2e-021
Identities = 49/112 (43%), Positives = 72/112 (64%)
Frame = -2 / -1
Query: 656 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 477
+ L + LVG I++ L Q LLD RVP ILDL+IS PWQLR + PP+P S+ ++DE+
Sbjct: 337 LHLGERLVGHRIDSHLAQFLLDPRVPVILDLVISSPWQLRSDS*PPIPYGSM*INDELLL 158
Query: 476 VLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLI 321
+ +L++ Q++ P Q TTL+ + S+FG APA+MAM IH+F +
Sbjct: 157 *FRQ*STLQIRAQVICPTQSTTLATSKQTSKFGYFAPASMAMQGDKIHQFSV 2
Score = 42.3 bits (86), Expect(2) = 8e-010
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +1 / +3
Query: 538 RSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
R+CQG LI RSRI GTR SRR+ R I PTS
Sbjct: 219 RNCQGELITRSRITGTRGSRRNCARWESIL*PTS 320
Score = 42.3 bits (86), Expect(2) = 8e-010
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2 / +1
Query: 320 G*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
G +T E ++ AWPW+L +QT W++ + +EL* +DKL
Sbjct: 1 GQKTGEFYHPAWPWMLARSTQTCWSA*MWQEL*IALDKL 117
Score = 35.9 bits (72), Expect(2) = 0.010
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY 646
E VV+N A ARE+** DQE +E QEE + + S PQA++
Sbjct: 196 E*VVTNRCAIAREN**RDQELLEHEDQEETAPDGNRSCDPQASH 327
Score = 24.4 bits (47), Expect(2) = 0.010
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +1 / +3
Query: 328 NS*IT*QSMAMAAGALFPNSLGFKGAERVV 417
N *I MAM AGA +PN L RVV
Sbjct: 9 NW*ILSPCMAMDAGAKYPNLLVCLDVARVV 98
>gb|DT638995.1|DT638995 EST1153926 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHL85 3' end, mRNA sequence
Length = 812
Score = 221 bits (478), Expect = 1e-056
Identities = 86/110 (78%), Positives = 94/110 (85%)
Frame = +3 / +1
Query: 321 DEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIEL 500
D KL+N IT HGHGCW VPKLAGL RCGKSCRLRW NYLRPDLKRG ++ EE LII+L
Sbjct: 10 DRKLVNFITLHGHGCWREVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSESEEKLIIDL 189
Query: 501 HAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTE 650
HA +GNRWS+IAAQLPGRTDNEIKN WN+ IKKKLRQ GIDP THKPLT+
Sbjct: 190 HAAIGNRWSRIAAQLPGRTDNEIKNYWNTRIKKKLRQMGIDPVTHKPLTQ 339
Score = 132 bits (283), Expect = 8e-030
Identities = 58/102 (56%), Positives = 66/102 (64%)
Frame = -3 / -1
Query: 646 VSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWA 467
V GLWV GS+P SFFL+ F FLISLSVLPG+CAAI DHLFP AC
Sbjct: 335 VRGLWVTGSIPIWRSFFLILVFQ*FLISLSVLPGNCAAIRDHLFPMAACRSMMSFSSDSD 156
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
N P +SG +*F+ +LQL PHL PASLGT Q PWPC V+
Sbjct: 155 NNPRFKSGRK*FVQRNLQLLPHLSRPASLGTSRQHPWPCRVI 30
Score = 104 bits (222), Expect = 2e-021
Identities = 49/112 (43%), Positives = 72/112 (64%)
Frame = -2 / -3
Query: 656 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 477
+ L + LVG I++ L Q LLD RVP ILDL+IS PWQLR + PP+P S+ ++DE+
Sbjct: 345 LHLGERLVGHRIDSHLAQFLLDPRVPVILDLVISSPWQLRSDS*PPIPYGSM*INDELLL 166
Query: 476 VLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLI 321
+ +L++ Q++ P Q TTL+ + S+FG APA+MAM IH+F +
Sbjct: 165 *FRQ*STLQIRAQVICPTQSTTLATSKQTSKFGYFAPASMAMQGDKIHQFSV 10
Score = 45.1 bits (92), Expect(2) = 1e-010
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2 / +3
Query: 317 GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
GG +T E ++ AWPW+L +QT W++ + +EL* +DKL
Sbjct: 6 GGQKTGEFYHPAWPWMLARSTQTCWSA*MWQEL*IALDKL 125
Score = 42.3 bits (86), Expect(2) = 1e-010
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +1 / +2
Query: 538 RSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
R+CQG LI RSRI GTR SRR+ R I PTS
Sbjct: 227 RNCQGELITRSRITGTRGSRRNCARWESIL*PTS 328
Score = 35.9 bits (72), Expect(2) = 0.005
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY 646
E VV+N A ARE+** DQE +E QEE + + S PQA++
Sbjct: 204 E*VVTNRCAIAREN**RDQELLEHEDQEETAPDGNRSCDPQASH 335
Score = 25.4 bits (49), Expect(2) = 0.005
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +1 / +2
Query: 316 RRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVV 417
R N *I MAM AGA +PN L RVV
Sbjct: 5 RGTENW*ILSPCMAMDAGAKYPNLLVCLDVARVV 106
>gb|DR011035.1|DR011035 HEAT1_3_A03.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_3_A03_A029 3', mRNA sequence
Length = 790
Score = 221 bits (477), Expect = 1e-056
Identities = 83/131 (63%), Positives = 100/131 (76%)
Frame = +3 / -1
Query: 249 CVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRW 428
C MG CC KG W+ EED++L +I HG GCW S+PK AGL RCGKSCRLRW
Sbjct: 790 C*TMGSAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRW 611
Query: 429 INYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 608
INYLRPDLKRG F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL
Sbjct: 610 INYLRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLI 431
Query: 609 QKGIDPNTHKP 641
G+DP T +P
Sbjct: 430 SMGVDPLTRRP 398
Score = 108 bits (230), Expect = 2e-022
Identities = 54/97 (55%), Positives = 57/97 (58%)
Frame = -3 / +3
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC S
Sbjct: 396 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEK 575
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIHLSLQLFPH PA+LG E Q P P
Sbjct: 576 PPRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP 686
Score = 95.0 bits (201), Expect = 2e-018
Identities = 41/129 (31%), Positives = 68/129 (52%)
Frame = -2 / +2
Query: 644 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 465
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+ +
Sbjct: 395 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFIFRK 574
Query: 464 CPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLL 285
S ++ +I+YP QP T S P + G R PA+ +M ++ + +IL GP L+ +
Sbjct: 575 TSSFQIRSKIIYPSQPATFSTPKQTCGLGERTPASFSMSLNILGKPVILFLGPGSLASVT 754
Query: 284 LVAARMPPH 258
+ AR H
Sbjct: 755 VGTARRTSH 781
>gb|DR387764.1|DR387764 RTHG1_24_A11.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_24_A11_A029 3', mRNA sequence
Length = 796
Score = 221 bits (477), Expect = 1e-056
Identities = 83/130 (63%), Positives = 104/130 (80%)
Frame = +3 / -3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K KG W+ EED +L+ +I +G G W S+PK AGL RCGKSCRLRWIN
Sbjct: 794 KMGRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWIN 615
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
YLRPDLKRG+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL K
Sbjct: 614 YLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIK 435
Query: 615 GIDPNTHKPL 644
GIDP +H+PL
Sbjct: 434 GIDPQSHRPL 405
Score = 117 bits (250), Expect = 3e-025
Identities = 54/140 (38%), Positives = 77/140 (55%)
Frame = -2 / +3
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 375 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 554
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DDE F E +LE+ Q+VYP QPT LSA +P G PAA A+ V +E ++
Sbjct: 555 DDEFVFFFCEASTLEIGTQVVYPSQPTALSASRQPCSLGKGTPAAFAVGSNVSNEAVVFF 734
Query: 314 RGPEPLSQLLLVAARMPPHL 255
P P + L+AA HL
Sbjct: 735 FCPGPFVGMSLLAAGRSSHL 794
Score = 103 bits (220), Expect = 4e-021
Identities = 52/96 (54%), Positives = 56/96 (58%)
Frame = -3 / +1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 409 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 588
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL SPA+LG E Q P P
Sbjct: 589 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSP 696
Score = 40.0 bits (81), Expect(2) = 3e-004
Identities = 23/60 (38%), Positives = 30/60 (50%)
Frame = +1 / -1
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RW + AA +G G ++ S +T + A AAG FP G + AER VG G*T
Sbjct: 793 RWEDLPAARRLIPTKGPGQKKKTTASLLTFEPTAKAAGVPFPRLQGCRDAERAVGCDG*T 614
Score = 25.4 bits (49), Expect(2) = 9.3
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / -1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 514 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 416
Score = 25.4 bits (49), Expect(2) = 3e-004
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / -2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 534 QQVVSYCRKIAGADGQRDKELLEHSHQEK 448
Score = 24.4 bits (47), Expect(2) = 9.3
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / -2
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 672 SQGCRAAEMRKEL*AAMDKL 613
>gb|CV034082.1|CV034082 RTNACL1_38_B11.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_38_B11_A029 5', mRNA sequence
Length = 734
Score = 221 bits (476), Expect = 2e-056
Identities = 83/129 (64%), Positives = 103/129 (79%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED +L+ +I +G G W S+PK AGL RCGKSCRLRWINY
Sbjct: 2 MGRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINY 181
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KG
Sbjct: 182 LRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKG 361
Query: 618 IDPNTHKPL 644
IDP +H+PL
Sbjct: 362 IDPQSHRPL 388
Score = 115 bits (246), Expect = 1e-024
Identities = 53/139 (38%), Positives = 76/139 (54%)
Frame = -2 / -2
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 418 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 239
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DDE F E +LE+ Q+VYP QPT LSA +P G PAA A+ V +E ++
Sbjct: 238 DDEFVFFFCEASTLEIGTQVVYPSQPTALSASRQPCSLGKGTPAAFAVGSNVSNEAVVFF 59
Query: 314 RGPEPLSQLLLVAARMPPH 258
P P + L+AA H
Sbjct: 58 FCPGPFVGMSLLAAGRSSH 2
Score = 103 bits (220), Expect = 4e-021
Identities = 52/96 (54%), Positives = 56/96 (58%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 384 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 205
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL SPA+LG E Q P P
Sbjct: 204 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSP 97
Score = 37.7 bits (76), Expect(2) = 0.002
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +1 / +3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
W + AA +G G ++ S +T + A AAG FP G + AER VG G*T
Sbjct: 3 WEDLPAARRLIPTKGPGQKKKTTASLLTFEPTAKAAGVPFPRLQGCRDAERAVGCDG*T 179
Score = 25.4 bits (49), Expect(2) = 9.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / +3
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 279 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 377
Score = 25.4 bits (49), Expect(2) = 0.002
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 259 QQVVSYCRKIAGADGQRDKELLEHSHQEK 345
Score = 24.4 bits (47), Expect(2) = 9.4
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 121 SQGCRAAEMRKEL*AAMDKL 180
>gb|DR164052.1|DR164052 RTFE1_46_B11.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_46_B11_A029 5', mRNA sequence
Length = 834
Score = 219 bits (472), Expect = 7e-056
Identities = 82/131 (62%), Positives = 104/131 (79%)
Frame = +3 / +3
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
++MGR CC K KG W+ EED +L+ +I +G G W S+PK AGL RCGKSCRLRWI
Sbjct: 36 MKMGRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWI 215
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
NYLRPDLKRG+F ++E++LII+LH+V+GN+WS IA +LPGR DNEIKN WN+ IK+KL
Sbjct: 216 NYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRMDNEIKNYWNTHIKRKLLI 395
Query: 612 KGIDPNTHKPL 644
KGIDP +H+PL
Sbjct: 396 KGIDPQSHRPL 428
Score = 117 bits (251), Expect = 2e-025
Identities = 54/141 (38%), Positives = 78/141 (55%)
Frame = -2 / -2
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 458 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVHPPRQSSCNKRPLVADDGVEF 279
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DDE F E +LE+ Q+VYP QPT LSA +P G PAA A+ V +E ++
Sbjct: 278 DDEFVFFFCEASTLEIGTQVVYPSQPTALSASRQPCSLGKGTPAAFAVGSNVSNEAVVFF 99
Query: 314 RGPEPLSQLLLVAARMPPHLN 252
P P + L+AA HL+
Sbjct: 98 FCPGPFVGMSLLAAGRSSHLH 36
Score = 103 bits (219), Expect = 5e-021
Identities = 51/96 (53%), Positives = 56/96 (58%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLS+ PG+ AI DHL P T S
Sbjct: 424 GRWDWGSIPLISNFLLM*VFQ*FFISLSIRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 245
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL SPA+LG E Q P P
Sbjct: 244 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSP 137
Score = 40.0 bits (81), Expect(2) = 3e-004
Identities = 23/60 (38%), Positives = 30/60 (50%)
Frame = +1 / +1
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RW + AA +G G ++ S +T + A AAG FP G + AER VG G*T
Sbjct: 40 RWEDLPAARRLIPTKGPGQKKKTTASLLTFEPTAKAAGVPFPRLQGCRDAERAVGCDG*T 219
Score = 25.4 bits (49), Expect(2) = 9.3
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 319 QEDCRGGWTTR*RTTGTLTSRENC*SRESTPSP 417
Score = 25.4 bits (49), Expect(2) = 3e-004
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 299 QQVVSYCRKIAGADGQRDKELLEHSHQEK 385
Score = 24.4 bits (47), Expect(2) = 9.3
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +2
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 161 SQGCRAAEMRKEL*AAMDKL 220
>gb|DR168212.1|DR168212 RTPHOS1_23_H12.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_23_H12_A029 5', mRNA sequence
Length = 600
Score = 218 bits (471), Expect = 9e-056
Identities = 82/128 (64%), Positives = 102/128 (79%)
Frame = +3 / +3
Query: 261 GRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 440
GR CC K KG W+ EED +L+ +I +G G W S+PK AGL RCGKSCRLRWINYL
Sbjct: 6 GRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYL 185
Query: 441 RPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGI 620
RPDLKRG+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGI
Sbjct: 186 RPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGI 365
Query: 621 DPNTHKPL 644
DP +H+PL
Sbjct: 366 DPQSHRPL 389
Score = 115 bits (246), Expect = 1e-024
Identities = 53/138 (38%), Positives = 76/138 (55%)
Frame = -2 / -2
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 419 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 240
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DDE F E +LE+ Q+VYP QPT LSA +P G PAA A+ V +E ++
Sbjct: 239 DDEFVFFFCEASTLEIGTQVVYPSQPTALSASRQPCSLGKGTPAAFAVGSNVSNEAVVFF 60
Query: 314 RGPEPLSQLLLVAARMPP 261
P P + L+AA P
Sbjct: 59 FCPGPFVGMSLLAAGRSP 6
Score = 103 bits (220), Expect = 4e-021
Identities = 52/96 (54%), Positives = 56/96 (58%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 385 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 206
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL SPA+LG E Q P P
Sbjct: 205 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSP 98
Score = 36.3 bits (73), Expect(2) = 0.004
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = +1 / +1
Query: 262 GGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
G + AA +G G ++ S +T + A AAG FP G + AER VG G*T
Sbjct: 7 GDLPAARRLIPTKGPGQKKKTTASLLTFEPTAKAAGVPFPRLQGCRDAERAVGCDG*T 180
Score = 25.4 bits (49), Expect(2) = 9.5
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 280 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 378
Score = 25.4 bits (49), Expect(2) = 0.004
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 260 QQVVSYCRKIAGADGQRDKELLEHSHQEK 346
Score = 24.4 bits (47), Expect(2) = 9.5
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +2
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 122 SQGCRAAEMRKEL*AAMDKL 181
>gb|DR014768.1|DR014768 HEAT1_51_B07.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_B07_A029 5', mRNA sequence
Length = 928
Score = 217 bits (468), Expect = 2e-055
Identities = 86/143 (60%), Positives = 103/143 (72%)
Frame = +3 / +1
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
V+MGR CC K KG W+ EED +L+ HI HG G W S+PK AGL RCGKSCRLRWI
Sbjct: 31 VKMGRTPCCEKAHTNKGAWTQEEDARLVAHIQAHGEGGWRSLPKAAGLLRCGKSCRLRWI 210
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
NYLRPDLKRG F++ E++LII+ H+ LGN+WS IA LPGRTDNEIKN WN+ IKKKL +
Sbjct: 211 NYLRPDLKRGNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVR 390
Query: 612 KGIDPNTHKPLTEADHGGAAPTI 680
G+DP +H PL E T+
Sbjct: 391 MGLDPKSHLPLGEPRDSNTTYTV 459
Score = 124 bits (266), Expect = 2e-027
Identities = 56/149 (37%), Positives = 79/149 (53%)
Frame = -2 / -2
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G +G AV +KW + +GI + Q LD RVP +L L++ PP Q CN RP VPE
Sbjct: 465 GQNGVGSVAVTGFAKWEMRLGIESHSHQFFLDVRVPVVLYLVVRPPGQNPCNKRPFVPEA 286
Query: 506 SVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEF 327
V+ DDE+ F+ E +L++ Q+VYP +P T AP +P G APAA A+ V +
Sbjct: 285 GVEFDDELIFLFREVSTLQIGTQVVYPSEPATFPAPQQPCGLGKGAPAAFAVCLNVCDKA 106
Query: 326 LILLRGPEPLSQLLLVAARMPPHLNAMQN 240
+ P P + L+ A HL +N
Sbjct: 105 SVFFLSPGPFVSMSLLTAGRSTHLYGEKN 19
Score = 57.0 bits (118), Expect(2) = 4e-018
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -3 / -3
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
P +SG R*FIH SLQLFPH +PA+LG E Q P PC
Sbjct: 239 PRFKSGRR*FIHRSLQLFPHRSNPAALGRERQPPSPC 129
Score = 56.1 bits (116), Expect(2) = 4e-018
Identities = 28/47 (59%), Positives = 29/47 (61%)
Frame = -3 / -3
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
S SG LGS P +FFLM F F ISLSV PG AI DHLFPR
Sbjct: 428 SPSGR*DLGSSPILTNFFLMCVFQWFFISLSVRPGKIRAIRDHLFPR 288
Score = 33.6 bits (67), Expect(2) = 0.003
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +1 / +2
Query: 544 CQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAP 687
C GG R R GTR SR++ IP+ SHL +TA P P
Sbjct: 323 CPGGRTTR*RTTGTRTSRKNW*EWDSIPSLISHLANPVTATLPTPFWP 466
Score = 28.6 bits (56), Expect(2) = 0.003
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +1 / +2
Query: 355 AMAAGALFPNSLGFKGAERVVG*GG*T 435
A AAGA FP G GA +V G G*T
Sbjct: 134 AKAAGAPFPRPQGCCGAGKVAGSDG*T 214
>gb|DR111240.1|DR111240 RTS1_16_G05.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_16_G05_A029 3', mRNA sequence
Length = 625
Score = 216 bits (467), Expect = 3e-055
Identities = 79/121 (65%), Positives = 100/121 (82%)
Frame = +3 / -3
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
K KG W+ EED++L+ HI HG GCW S+PK AGL RCGKSCRLRWINYLRPDLKRG
Sbjct: 614 KSS*NKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINYLRPDLKRG 435
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL +G+DP +H+P
Sbjct: 434 NFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGLDPQSHRP 255
Query: 642 L 644
L
Sbjct: 254 L 252
Score = 109 bits (232), Expect = 9e-023
Identities = 49/129 (37%), Positives = 71/129 (55%)
Frame = -2 / +3
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G G AV+ L++ +G+G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 210 GQRGAGRVAVVRLAEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAEQ 389
Query: 506 SVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEF 327
V+ DDE F E +L++ Q+VYP +P L A +P G RAPA A+ V E
Sbjct: 390 GVEFDDEFVFFF*EVSTLQIRTQVVYPSEPAALPAAHQPCGLGKRAPATFAVSSNVGDEA 569
Query: 326 LILLRGPEP 300
++L GP P
Sbjct: 570 IVLFFGPRP 596
Score = 94.5 bits (200), Expect = 2e-018
Identities = 49/96 (51%), Positives = 53/96 (55%)
Frame = -3 / +1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS P +F LM F F ISLSV PG+ AI DHL P S
Sbjct: 256 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLMMSSSSSSEKF 435
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIH SLQLFP SPA+LG+E QQP P
Sbjct: 436 PRFRSGRR*FIHRSLQLFPQRISPAALGSERQQPSP 543
Score = 30.4 bits (60), Expect(2) = 0.013
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +1 / -1
Query: 298 RGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
+G GP +R S T + A AGA FP G A R G G*T
Sbjct: 598 KGRGPKKRTIASSPTFELTAKVAGARFPRPQG*CAAGRAAGSDG*T 461
Score = 29.5 bits (58), Expect(2) = 0.013
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2 / -2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C AR D D+E +E HQE+
Sbjct: 381 QQVVSYCRQIARADGQRDKELLEYSHQEK 295
>gb|DR099337.1|DR099337 STRR1_54_G08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_54_G08_A033 5', mRNA sequence
Length = 499
Score = 216 bits (466), Expect = 5e-055
Identities = 80/123 (65%), Positives = 97/123 (78%)
Frame = +3 / +3
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 452
CC KG W+ EED++L +I HG GCW S+PK AGL RCGKSCRLRWINYLRPDL
Sbjct: 6 CCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDL 185
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNT 632
KRG F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T
Sbjct: 186 KRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLT 365
Query: 633 HKP 641
+P
Sbjct: 366 RRP 374
Score = 108 bits (230), Expect = 2e-022
Identities = 54/97 (55%), Positives = 57/97 (58%)
Frame = -3 / -1
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC S
Sbjct: 376 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEK 197
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIHLSLQLFPH PA+LG E Q P P
Sbjct: 196 PPRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP 86
Score = 92.7 bits (196), Expect = 8e-018
Identities = 40/125 (32%), Positives = 67/125 (53%)
Frame = -2 / -3
Query: 644 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 465
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+ +
Sbjct: 377 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFIFRK 198
Query: 464 CPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLL 285
S ++ +I+YP QP T S P + G R PA+ +M ++ + +IL GP L+ +
Sbjct: 197 TSSFQIRSKIIYPSQPATFSTPKQTCGLGERTPASFSMSLNILGKPVILFLGPGSLASVT 18
Query: 284 LVAAR 270
+ AR
Sbjct: 17 VGTAR 3
>gb|CF391376.1|CF391376 RTDR3_1_G04.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_1_G04_A022 5', mRNA
sequence
Length = 480
Score = 215 bits (465), Expect = 6e-055
Identities = 83/127 (65%), Positives = 98/127 (77%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K L+KG W+PEED+KL+ +I +HGHG W ++P+ AGL RCGKSCRLRW NY
Sbjct: 99 MGRAPCCEKVGLKKGPWTPEEDQKLLAYIQEHGHGSWRALPQKAGLLRCGKSCRLRWTNY 278
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPD+KRG F EE II+LHA+LGNRWS I QLP RTDNEIKN WN+ +KK+L Q G
Sbjct: 279 LRPDIKRGKFNPQEEQTIIQLHALLGNRWSTITTQLPKRTDNEIKNYWNTHLKKRLVQMG 458
Query: 618 IDPNTHK 638
IDP T K
Sbjct: 459 IDPMTQK 479
Score = 92.3 bits (195), Expect = 1e-017
Identities = 47/135 (34%), Positives = 73/135 (54%)
Frame = -2 / -2
Query: 626 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEV 447
G+++ L Q L +P +LDL++S +L + PP+ + ++L++ +FF+ E L++
Sbjct: 467 GVDSHLHQALFQMGIPVVLDLVVSSLRKLSGDGGPPISQKGMKLNNCLFFLWVELSPLDI 288
Query: 446 WPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARM 267
W +IV P Q A +PS PAAMA+L YV E LI LR P L + L AA
Sbjct: 287 WSEIVSPTQSAAFPASQQPSFLRQSPPAAMAVLLYVSEELLIFLRRPGALLEPNLFAAGS 108
Query: 266 PPHLNAMQNLGAPTK 222
P H + GA ++
Sbjct: 107 PTHYFSPLWFGADSR 63
Score = 57.4 bits (119), Expect(2) = 5e-016
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = -3 / -3
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
N P L SGLR* + +LQLFPHL +PA G LQ PWPC M
Sbjct: 307 NFPRLISGLR*LVQRNLQLFPHLSNPAF*GRALQLPWPCSCM 182
Score = 48.3 bits (99), Expect(2) = 5e-016
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = -3 / -3
Query: 631 VLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTA 503
V+GS+P C F F FLISLSV GS + DHLFPR A
Sbjct: 472 VMGSIPICTKRFFRWVFQ*FLISLSVRLGS*VVMVDHLFPRRA 344
Score = 37.3 bits (75), Expect = 0.39
Identities = 25/65 (38%), Positives = 32/65 (49%)
Frame = +1 / +1
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
W G+ AA R G R++R+S +T +S AMAAG L LG A + G TI
Sbjct: 100 WVGLPAAKRLGSRRAPGRRRKIRSSSLTYRSTAMAAGGLCLRKLGC*DAGKAADCVGLTI 279
Query: 439 *GQTS 453
Q S
Sbjct: 280 SDQIS 294
>gb|CF401736.1|CF401736 RTWW1_14_C05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_14_C05_A015 5', mRNA sequence
Length = 792
Score = 214 bits (462), Expect = 2e-054
Identities = 80/124 (64%), Positives = 100/124 (80%)
Frame = +3 / +3
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 452
CC K KG W+ EED +L+ +I +G G W S+PK AGL RCGKSCRLRWINYLRPDL
Sbjct: 9 CCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYLRPDL 188
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNT 632
KRG+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +
Sbjct: 189 KRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQS 368
Query: 633 HKPL 644
H+PL
Sbjct: 369 HRPL 380
Score = 111 bits (238), Expect = 1e-023
Identities = 51/130 (39%), Positives = 74/130 (56%)
Frame = -2 / -2
Query: 662 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 483
A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+ DDE
Sbjct: 398 AAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEFDDEF 219
Query: 482 FFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPE 303
F E +LE+ Q+VYP QPT LSA +P G PAA A+ V +E ++ P
Sbjct: 218 VFFFCEASTLEIGTQVVYPSQPTALSASRQPCSLGKGTPAAFAVGSNVSNEAVVFFFCPG 39
Query: 302 PLSQLLLVAA 273
P + L+AA
Sbjct: 38 PFVGMSLLAA 9
Score = 103 bits (220), Expect = 4e-021
Identities = 52/96 (54%), Positives = 56/96 (58%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 376 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 197
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL SPA+LG E Q P P
Sbjct: 196 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSP 89
Score = 35.9 bits (72), Expect(2) = 0.005
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1 / +1
Query: 298 RGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
+G G ++ S +T + A AAG FP G + AER VG G*T
Sbjct: 34 KGPGQKKKTTASLLTFEPTAKAAGVPFPRLQGCRDAERAVGCDG*T 171
Score = 25.4 bits (49), Expect(2) = 9.3
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 271 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 369
Score = 25.4 bits (49), Expect(2) = 0.005
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 251 QQVVSYCRKIAGADGQRDKELLEHSHQEK 337
Score = 24.4 bits (47), Expect(2) = 9.3
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +2
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 113 SQGCRAAEMRKEL*AAMDKL 172
>gb|CF669490.1|CF669490 RTCNT1_44_A10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_44_A10_A029 3', mRNA sequence
Length = 655
Score = 214 bits (462), Expect = 2e-054
Identities = 81/129 (62%), Positives = 101/129 (78%)
Frame = +3 / -2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+M R CC KG W+ EED+KL+ +I HG G W+S+PK AGL RCGKSCRLRW+N
Sbjct: 654 KMARAPCCPIGDRNKGAWTREEDDKLIQYIQTHGEGGWNSLPKAAGLLRCGKSCRLRWMN 475
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
YLRP LKRG F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL
Sbjct: 474 YLRPQLKRGNFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISM 295
Query: 615 GIDPNTHKP 641
G+DP TH+P
Sbjct: 294 GVDPLTHRP 268
Score = 101 bits (215), Expect = 2e-020
Identities = 51/98 (52%), Positives = 54/98 (55%)
Frame = -3 / +2
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
+G V GS P +SF EF FLISLSV PG AI DHL PR AC S
Sbjct: 266 NGRCVRGSTPMLISFLFRCEFQ*FLISLSVRPGKRPAIRDHLLPRRACSLRIRSSSSSEK 445
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
P G R*FIHLSLQL PH PA+LG E Q P PC
Sbjct: 446 FPRFS*GRR*FIHLSLQLLPHRSRPAALGREFQPPSPC 559
Score = 85.8 bits (181), Expect = 9e-016
Identities = 40/116 (34%), Positives = 65/116 (56%)
Frame = -2 / +1
Query: 653 SLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 474
+L K V GINA +L L RVP ILDL++ Q P + ++SVQ ++++ FV
Sbjct: 256 NLLKRTVRQGINAHADKLSLQMRVPVILDLVVCSTGQTTSYQGPLIAKESVQFENKIVFV 435
Query: 473 LGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGP 306
+ P+ ++ +I++P QP T + P + G R PAA++M V+ + +IL P
Sbjct: 436 FRKIPTFQLRAKIIHPSQPATFATPKQTCGLGERVPAALSMRLNVLDKLVILFSRP 603
Score = 35.4 bits (71), Expect(2) = 0.056
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2 / -1
Query: 320 G*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLS 439
G*+ + H+ AW LEL Q R ++ V ++L AE+D+LS
Sbjct: 589 G*QAYPIHSDAWRGRLELSPQGRRSASVWQKLQAEMDELS 470
Score = 25.8 bits (50), Expect(2) = 0.056
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +1 / -3
Query: 565 RSRIYGTRASRRS*GRKALIPTPTSHLLRLI 657
RSRI GTR R S ALIP T R +
Sbjct: 344 RSRITGTRI*RESLSAWALIP*RTVRFKRFV 252
>gb|DR178268.1|DR178268 RTMNUT1_10_C01.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_10_C01_A029 5', mRNA sequence
Length = 719
Score = 214 bits (462), Expect = 2e-054
Identities = 80/124 (64%), Positives = 100/124 (80%)
Frame = +3 / +1
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 452
CC K KG W+ EED +L+ +I +G G W S+PK AGL RCGKSCRLRWINYLRPDL
Sbjct: 4 CCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYLRPDL 183
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNT 632
KRG+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +
Sbjct: 184 KRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQS 363
Query: 633 HKPL 644
H+PL
Sbjct: 364 HRPL 375
Score = 112 bits (239), Expect = 9e-024
Identities = 51/134 (38%), Positives = 75/134 (55%)
Frame = -2 / -3
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 405 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 226
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DDE F + +LE+ Q+VYP QPT LSA +P G PAA A+ V +E ++
Sbjct: 225 DDEFVFFFCKASTLEIGTQVVYPSQPTALSASRQPCSLGKGTPAAFAVGSNVSNEAVVFF 46
Query: 314 RGPEPLSQLLLVAA 273
P P + L+AA
Sbjct: 45 FCPGPFVGMSLLAA 4
Score = 103 bits (220), Expect = 4e-021
Identities = 52/96 (54%), Positives = 56/96 (58%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 371 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 192
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL SPA+LG E Q P P
Sbjct: 191 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSP 84
Score = 35.9 bits (72), Expect(2) = 0.005
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1 / +2
Query: 298 RGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
+G G ++ S +T + A AAG FP G + AER VG G*T
Sbjct: 29 KGPGQKKKTTASLLTFEPTAKAAGVPFPRLQGCRDAERAVGCDG*T 166
Score = 25.4 bits (49), Expect(2) = 9.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 266 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 364
Score = 25.4 bits (49), Expect(2) = 0.005
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 246 QQVVSYCRKIAGADGQRDKELLEHSHQEK 332
Score = 24.4 bits (47), Expect(2) = 9.4
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 108 SQGCRAAEMRKEL*AAMDKL 167
>gb|CF667045.1|CF667045 RTCNT1_27_G11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_27_G11_A029 5', mRNA sequence
Length = 744
Score = 214 bits (461), Expect = 2e-054
Identities = 85/141 (60%), Positives = 101/141 (71%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED +L+ HI HG G W S+PK AGL RCGKSCRLRWINY
Sbjct: 3 MGRTPCC*KAHTNKGAWTQEEDARLVAHIQAHGEGGWRSLPKAAGLLRCGKSCRLRWINY 182
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F++ E++LII+ H+ LGN+WS IA LPGRTDNEIKN WN+ IKKKL + G
Sbjct: 183 LRPDLKRGNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMG 362
Query: 618 IDPNTHKPLTEADHGGAAPTI 680
+DP +H PL E T+
Sbjct: 363 LDPKSHLPLGEPRDSNTTYTV 425
Score = 124 bits (266), Expect = 2e-027
Identities = 55/143 (38%), Positives = 77/143 (53%)
Frame = -2 / -2
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G +G AV +KW + +GI + Q LD RVP +L L++ PP Q CN RP VPE
Sbjct: 431 GQNGVGSVAVTGFAKWEMRLGIESHSHQFFLDVRVPVVLYLVVRPPGQNPCNKRPFVPEA 252
Query: 506 SVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEF 327
V+ DDE+ F+ E +L++ Q+VYP +P T AP +P G APAA A+ V +
Sbjct: 251 GVEFDDELVFLFREVSTLQIGTQVVYPSEPATFPAPQQPCGLGKGAPAAFAVCLNVCDKA 72
Query: 326 LILLRGPEPLSQLLLVAARMPPH 258
+ P P + L+ A PH
Sbjct: 71 SVFFLSPGPFVSMSLLTAGRSPH 3
Score = 57.0 bits (118), Expect(2) = 4e-018
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -3 / -3
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
P +SG R*FIH SLQLFPH +PA+LG E Q P PC
Sbjct: 205 PRFKSGRR*FIHRSLQLFPHRSNPAALGRERQPPSPC 95
Score = 56.1 bits (116), Expect(2) = 4e-018
Identities = 28/47 (59%), Positives = 29/47 (61%)
Frame = -3 / -3
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
S SG LGS P +FFLM F F ISLSV PG AI DHLFPR
Sbjct: 394 SPSGR*DLGSSPILTNFFLMCVFQWFFISLSVRPGKIRAIRDHLFPR 254
Score = 33.6 bits (67), Expect(2) = 0.003
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +1 / +1
Query: 544 CQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAP 687
C GG R R GTR SR++ IP+ SHL +TA P P
Sbjct: 289 CPGGRTTR*RTTGTRTSRKNW*EWDSIPSLISHLANPVTATLPTPFWP 432
Score = 28.6 bits (56), Expect(2) = 0.003
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +1 / +1
Query: 355 AMAAGALFPNSLGFKGAERVVG*GG*T 435
A AAGA FP G GA +V G G*T
Sbjct: 100 AKAAGAPFPRPQGCCGAGKVAGSDG*T 180
>gb|CF667523.1|CF667523 RTCNT1_30_H07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_30_H07_A029 5', mRNA sequence
Length = 667
Score = 214 bits (461), Expect = 2e-054
Identities = 82/139 (58%), Positives = 102/139 (73%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K L +G W+PEED L N+I HG G W ++PK A L RCGKSCRLRW+NY
Sbjct: 67 MGRTPCCLKVGLNRGPWTPEEDLCLSNYIESHGEGGWRTLPKKARLLRCGKSCRLRWMNY 246
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPD+K G +EEDLI+ LH +LGNRWS IA ++PGRTDNE+KN WN+ + KKL +G
Sbjct: 247 LRPDVKHGHILPEEEDLILRLHRLLGNRWSLIAGRMPGRTDNEVKNYWNTHLSKKLISQG 426
Query: 618 IDPNTHKPLTEADHGGAAP 674
IDP THKPL E++ ++P
Sbjct: 427 IDPRTHKPLAESEDICSSP 483
Score = 93.6 bits (198), Expect = 4e-018
Identities = 53/113 (46%), Positives = 60/113 (53%)
Frame = -3 / -3
Query: 691 LSVLMVGAAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
L+ L +G S S +GL V GS+P +SF L F FL SLSVLPG AI DHLFP
Sbjct: 500 LTSLFLGLEHMSSDSANGLCVRGSIP*LISFLLRWVFQ*FLTSLSVLPGIRPAIKDHLFP 321
Query: 511 RTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
R C S P SG R*FI +LQLFPH A LG+ L P P
Sbjct: 320 RRRCNLSIKSSSSGNMCPCFTSGRR*FIQRNLQLFPHRSRRAFLGSVLHPPSP 162
Score = 57.0 bits (118), Expect = 5e-007
Identities = 37/139 (26%), Positives = 61/139 (43%)
Frame = -2 / -2
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G+ T V + V ++ +L + +P +LDLII + RPPV + ++Q
Sbjct: 483 GTRTYVFGFCQRFVRPRVDTLTDKLFAEVGIPIVLDLIIRSAGHTSSDQRPPVSKKTMQP 304
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
+ +F + P + +I++P Q TL A + G +P A ++ VI E ILL
Sbjct: 303 EY*IFLLG*YVPVFHIGSEIIHPTQSATLPASEQTCFLGKCSPPAFSVRFDVI*EAKILL 124
Query: 314 RGPEPLSQLLLVAARMPPH 258
P + R P H
Sbjct: 123 GCPGTSIESHFQTTRSPSH 67
>gb|BX679906.1|BX679906 BX679906 RS Pinus pinaster cDNA clone RS36A06, mRNA sequence
Length = 448
Score = 214 bits (461), Expect = 2e-054
Identities = 78/116 (67%), Positives = 99/116 (85%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQD 476
KG W+ EEDE+L+ HI HG G W S+PK AGL RCGKSCRLRWINYLRPDLKRG+F+++
Sbjct: 76 KGAWTKEEDERLIAHIEAHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGSFSEE 255
Query: 477 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
E+DLII+LH++LGN+WS IA +LPGRTDNEIKN WN+ +K+KL +G+DP +H+PL
Sbjct: 256 EDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHMKRKLLSRGLDPQSHRPL 423
Score = 96.4 bits (204), Expect = 6e-019
Identities = 43/120 (35%), Positives = 65/120 (54%)
Frame = -2 / -2
Query: 665 TAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDE 486
T++ +K +G+G+ + Q L RVP IL L++ PWQ CN RP V E+ V+ DDE
Sbjct: 444 TSLARQAKGTMGLGVESPAQQFPLHVRVPVILYLVVRSPWQSPCNKRPLVAEEGVEFDDE 265
Query: 485 VFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGP 306
+ F + + ++ Q+VYP QP L +P G R P A+A+ V + L+ GP
Sbjct: 264 IVFFF*KASAFQIRTQVVYPSQPAALPTSQQPCGLGKRTP*ALAVGFNVCDKTLVFFFGP 85
Score = 94.1 bits (199), Expect = 3e-018
Identities = 47/96 (48%), Positives = 52/96 (54%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS P +F M F F ISLSV PG+ AI DHL PR S
Sbjct: 419 GRWDWGSSPLLSNFLFMCVFQ*FFISLSVRPGNLPAISDHLLPRREWSLMMRSSSSSEKL 240
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIH +LQLFPH SPA+LG E +P P
Sbjct: 239 PRFRSGRR*FIHRNLQLFPHRSSPAALGRERHEPSP 132
>gb|CO198121.1|CO198121 GEO1_11_A02.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_11_A02_A029 5', mRNA sequence
Length = 667
Score = 214 bits (461), Expect = 2e-054
Identities = 78/116 (67%), Positives = 99/116 (85%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQD 476
KG W+ EEDE+L+ HI HG G W S+PK AGL RCGKSCRLRWINYLRPDLKRG+F+++
Sbjct: 12 KGAWTKEEDERLIAHIEAHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGSFSEE 191
Query: 477 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
E+DLII+LH++LGN+WS IA +LPGRTDNEIKN WN+ +K+KL +G+DP +H+PL
Sbjct: 192 EDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHMKRKLLSRGLDPQSHRPL 359
Score = 95.9 bits (203), Expect = 9e-019
Identities = 42/120 (35%), Positives = 64/120 (53%)
Frame = -2 / -3
Query: 665 TAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDE 486
T++ +K +G+G+ + Q RVP IL ++ PWQ CN RP V E+ V+ DDE
Sbjct: 380 TSLAGQAKRTMGLGVESPTQQFPFHVRVPVILYFVVRSPWQSPCNKRPLVAEEGVEFDDE 201
Query: 485 VFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGP 306
+ F + + ++ Q+VYP QP L +P G R P A+A+ V +E L+ GP
Sbjct: 200 IVFFF*KASAFQIRTQVVYPSQPAALPTSQQPCGLGKRTP*ALAVGFNVCYETLVFFFGP 21
Score = 94.1 bits (199), Expect = 3e-018
Identities = 47/96 (48%), Positives = 52/96 (54%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS P +F M F F ISLSV PG+ AI DHL PR S
Sbjct: 355 GRWDWGSSPLLSNFLFMCVFQ*FFISLSVRPGNLPAISDHLLPRREWSLMMRSSSSSEKL 176
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIH +LQLFPH SPA+LG E +P P
Sbjct: 175 PRFRSGRR*FIHRNLQLFPHRSSPAALGRERHEPSP 68
>gb|CO361397.1|CO361397 NDL2_4_D03.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_4_D03_A029 5', mRNA sequence
Length = 804
Score = 214 bits (461), Expect = 2e-054
Identities = 78/116 (67%), Positives = 99/116 (85%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQD 476
KG W+ EEDE+L+ HI HG G W S+PK AGL RCGKSCRLRWINYLRPDLKRG+F+++
Sbjct: 5 KGAWTKEEDERLIAHIEAHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGSFSEE 184
Query: 477 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
E+DLII+LH++LGN+WS IA +LPGRTDNEIKN WN+ +K+KL +G+DP +H+PL
Sbjct: 185 EDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHMKRKLLSRGLDPQSHRPL 352
Score = 95.9 bits (203), Expect = 9e-019
Identities = 42/120 (35%), Positives = 64/120 (53%)
Frame = -2 / -3
Query: 665 TAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDE 486
T++ +K +G+G+ + Q RVP IL ++ PWQ CN RP V E+ V+ DDE
Sbjct: 373 TSLAGQAKRTMGLGVESPAQQFPFHVRVPVILYFVVRSPWQSPCNKRPLVAEEGVEFDDE 194
Query: 485 VFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGP 306
+ F + + ++ Q+VYP QP L +P G R P A+A+ V +E L+ GP
Sbjct: 193 IVFFF*KASAFQIRTQVVYPSQPAALPTSQQPCGLGKRTP*ALAVGFNVCYETLVFFFGP 14
Score = 94.1 bits (199), Expect = 3e-018
Identities = 47/96 (48%), Positives = 52/96 (54%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS P +F M F F ISLSV PG+ AI DHL PR S
Sbjct: 348 GRWDWGSSPLLSNFLFMCVFQ*FFISLSVRPGNLPAISDHLLPRREWSLMMRSSSSSEKL 169
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIH +LQLFPH SPA+LG E +P P
Sbjct: 168 PRFRSGRR*FIHRNLQLFPHRSSPAALGRERHEPSP 61
>gb|BQ701670.1|BQ701670 NXSI_118_C02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_118_C02 5' similar to Arabidopsis thaliana
sequence At4g38620 putative transcription factor (MYB4)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 549
Score = 213 bits (460), Expect = 3e-054
Identities = 85/143 (59%), Positives = 102/143 (71%)
Frame = +3 / +2
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
V+MGR CC K KG W+ EED +L+ HI HG G W S+PK AGL RCGKSCRLRWI
Sbjct: 20 VKMGRTPCCEKAHTNKGAWTQEEDARLVAHIQAHGEGGWRSLPKAAGLLRCGKSCRLRWI 199
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
NYLRPDLKRG F++ E++LII+ H+ LGN+WS IA LPGRTDNEIKN WN+ IKKKL +
Sbjct: 200 NYLRPDLKRGNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVR 379
Query: 612 KGIDPNTHKPLTEADHGGAAPTI 680
G+D +H PL E T+
Sbjct: 380 MGLDSKSHLPLGEPRDSNTTYTV 448
Score = 128 bits (274), Expect = 1e-028
Identities = 57/149 (38%), Positives = 80/149 (53%)
Frame = -2 / -3
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G +G AV +KW + +GI + Q LD RVP +L L++ PP Q CN RP VPE
Sbjct: 454 GQNGVGSVAVTGFTKWEMRLGIESHSHQFFLDVRVPVVLYLVVRPPGQNPCNKRPFVPET 275
Query: 506 SVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEF 327
V+ DDE+ F+ E +L++ Q+VYP +P T AP +P G APAA A+ V +
Sbjct: 274 GVEFDDELVFLFREVSTLQIGTQVVYPSEPATFPAPQQPCGLGKGAPAAFAVCLNVCDKA 95
Query: 326 LILLRGPEPLSQLLLVAARMPPHLNAMQN 240
+ P P + L+ A PHL +N
Sbjct: 94 SVFFLSPGPFVSMSLLTAGRSPHLYGEKN 8
Score = 57.0 bits (118), Expect(2) = 4e-017
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -3 / -1
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
P +SG R*FIH SLQLFPH +PA+LG E Q P PC
Sbjct: 228 PRFKSGRR*FIHRSLQLFPHRSNPAALGRERQPPSPC 118
Score = 52.4 bits (108), Expect(2) = 4e-017
Identities = 27/47 (57%), Positives = 28/47 (59%)
Frame = -3 / -1
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
S SG L S P +FFLM F F ISLSV PG AI DHLFPR
Sbjct: 417 SPSGR*DLESSPILTNFFLMCVFQWFFISLSVRPGKIRAIRDHLFPR 277
Score = 34.5 bits (69), Expect(2) = 0.002
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +1 / +3
Query: 544 CQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAP 687
C GG R R GTR SR++ IP+ SHL+ +TA P P
Sbjct: 312 CPGGRTTR*RTTGTRTSRKNW*EWDSIPSLISHLVNPVTATLPTPFWP 455
Score = 28.6 bits (56), Expect(2) = 0.002
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +1 / +3
Query: 355 AMAAGALFPNSLGFKGAERVVG*GG*T 435
A AAGA FP G GA +V G G*T
Sbjct: 123 AKAAGAPFPRPQGCCGAGKVAGSDG*T 203
>gb|CF477905.1|CF477905 RTWW3_13_C03.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_13_C03_A022 5', mRNA sequence
Length = 707
Score = 213 bits (459), Expect = 4e-054
Identities = 83/130 (63%), Positives = 101/130 (77%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC + L +G W+ +ED L +I HG G WS++P+ AGL RCGKSCRLRW+N
Sbjct: 84 KMGRAPCCSQVGLLRGPWTAKEDNLLTRYIEWHGEGDWSNLPEKAGLGRCGKSCRLRWLN 263
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
YLRP +KRG +QDEEDLII LH +LGNRWS IA +LPGRTDNEIKN WNS + K+LR++
Sbjct: 264 YLRPTIKRGNISQDEEDLIIRLHRLLGNRWSLIAGRLPGRTDNEIKNHWNSHLSKQLRKR 443
Query: 615 GIDPNTHKPL 644
GIDP THKPL
Sbjct: 444 GIDPLTHKPL 473
Score = 98.7 bits (209), Expect = 1e-019
Identities = 50/97 (51%), Positives = 53/97 (54%)
Frame = -3 / -2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
GLWV GS+P LS L F F ISLSV PG+ AI DHL PR+ C SW
Sbjct: 469 GLWVRGSIPRFLSCLLR*LFQ*FFISLSVRPGNLPAINDHLLPRSRCRRIMRSSSSWEMF 290
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
P GLR* H SLQLFPH PA G LQ P PC
Sbjct: 289 PRFIVGLR*LSHRSLQLFPHRPRPAFSGRLLQSPSPC 179
Score = 92.7 bits (196), Expect = 8e-018
Identities = 46/126 (36%), Positives = 62/126 (49%)
Frame = -2 / -1
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
VG GI+ L LL +P IL ++ PWQ C RPPV ++ +Q + E+FFVLG S
Sbjct: 464 VGEGIDPSLS*LLAQMTIPVILYFVVCSPWQSACYQRPPVAKEPMQANYEIFFVLGNVSS 285
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVA 276
Q++ P QP TLS P + P AM + + ++LL GP Q L
Sbjct: 284 FYSGSQVIEPSQPATLSTPPQTCFLWQITPVTFAMPFNISGKEIVLLGGPGSSEQANLGT 105
Query: 275 ARMPPH 258
R P H
Sbjct: 104 TRSPTH 87
>gb|CO361899.1|CO361899 NDL2_7_G04.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_7_G04_A029 5', mRNA sequence
Length = 871
Score = 213 bits (459), Expect = 4e-054
Identities = 83/130 (63%), Positives = 97/130 (74%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K L KG WS EED L +I HG G W S+PK AGL+RCGKSCRLRW+NY
Sbjct: 3 MGRAPCCTKVGLNKGAWSAEEDSLLGKYIQTHGEGNWRSLPKKAGLRRCGKSCRLRWLNY 182
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRP +KRG DEE+LII +HA+LGNRWS IA ++PGRTDNEIKN WN+ + KKL +G
Sbjct: 183 LRPCIKRGNITTDEEELIIRMHALLGNRWSIIAGRVPGRTDNEIKNYWNTNLSKKLAVRG 362
Query: 618 IDPNTHKPLT 647
IDP THK +T
Sbjct: 363 IDPKTHKKIT 392
Score = 92.3 bits (195), Expect = 1e-017
Identities = 48/93 (51%), Positives = 53/93 (56%)
Frame = -3 / -1
Query: 631 VLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLL 452
VLGS+P SF L F F ISLSV PG+ AI DHL P+ AC S P L
Sbjct: 376 VLGSIPLTASFLLKLVFQ*FFISLSVRPGTLPAIIDHLLPKRACILIISSSSSVVIFPRL 197
Query: 451 RSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
G R*F +LQLFPHL SPA LG +LQ P P
Sbjct: 196 IHGRR*FSQRNLQLFPHLRSPAFLGRDLQLPSP 98
Score = 68.0 bits (142), Expect = 2e-010
Identities = 36/128 (28%), Positives = 57/128 (44%)
Frame = -2 / -3
Query: 641 WLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGEC 462
+ + +GI++ + L VP +L ++ C RP V ++S+ D++ FF+
Sbjct: 386 FFMSLGIDSPDSKFLAQVSVPVVLYFVVCSAGDSPCYYRPSVAQESMHSDNKFFFICCNI 207
Query: 461 PSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLL 282
L+ WP+IV P Q LS +P G R P A M + + IL P L +
Sbjct: 206 SPLDTWPKIV*PTQSAALSTSSQPCFLGQRPPIAFTMSLNIFSQKTILFGRPCSLVETNF 27
Query: 281 VAARMPPH 258
AA H
Sbjct: 26 CAAWSTTH 3
Score = 34.5 bits (69), Expect = 2.6
Identities = 19/61 (31%), Positives = 37/61 (60%)
Frame = +2 / +2
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
DG +L ++ +++G++V G* + + ++ +W LE+ +Q A+K+ KEL + KL
Sbjct: 2 DGSCSMLHKSWSQQGSMVCRRG*SSGKIYSNSW*RQLEVSAQESRAAKMWKELQIALAKL 181
Query: 437 S 439
S
Sbjct: 182 S 184
>gb|CO361315.1|CO361315 NDL2_4_D03.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_4_D03_A029 3', mRNA sequence
Length = 894
Score = 211 bits (456), Expect = 1e-053
Identities = 77/115 (66%), Positives = 98/115 (85%)
Frame = +3 / +2
Query: 300 GLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDE 479
G W+ EEDE+L+ HI HG G W S+PK AGL RCGKSCRLRWINYLRPDLKRG+F+++E
Sbjct: 2 GAWTKEEDERLIAHIEAHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGSFSEEE 181
Query: 480 EDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
+DLII+LH++LGN+WS IA +LPGRTDNEIKN WN+ +K+KL +G+DP +H+PL
Sbjct: 182 DDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHMKRKLLSRGLDPQSHRPL 346
Score = 95.9 bits (203), Expect = 9e-019
Identities = 42/120 (35%), Positives = 64/120 (53%)
Frame = -2 / -3
Query: 665 TAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDE 486
T++ +K +G+G+ + Q RVP IL ++ PWQ CN RP V E+ V+ DDE
Sbjct: 367 TSLAGQAKRTMGLGVESPAQQFPFHVRVPVILYFVVRSPWQSPCNKRPLVAEEGVEFDDE 188
Query: 485 VFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGP 306
+ F + + ++ Q+VYP QP L +P G R P A+A+ V +E L+ GP
Sbjct: 187 IVFFF*KASAFQIRTQVVYPSQPAALPTSQQPCGLGKRTP*ALAVGFNVCYETLVFFFGP 8
Score = 94.1 bits (199), Expect = 3e-018
Identities = 47/96 (48%), Positives = 52/96 (54%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS P +F M F F ISLSV PG+ AI DHL PR S
Sbjct: 342 GRWDWGSSPLLSNFLFMCVFQ*FFISLSVRPGNLPAISDHLLPRREWSLMMRSSSSSEKL 163
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIH +LQLFPH SPA+LG E +P P
Sbjct: 162 PRFRSGRR*FIHRNLQLFPHRSSPAALGRERHEPSP 55
>gb|CO365658.1|CO365658 RTK1_18_A01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_18_A01_A029 5', mRNA sequence
Length = 812
Score = 211 bits (456), Expect = 1e-053
Identities = 78/115 (67%), Positives = 95/115 (82%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQD 476
KG W+ EED++L +I HG GCW S+PK AGL RCGKSCRLRWINYLRPDLKRG F++D
Sbjct: 1 KGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGGFSED 180
Query: 477 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
E+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T +P
Sbjct: 181 EDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRRP 345
Score = 108 bits (230), Expect = 2e-022
Identities = 54/97 (55%), Positives = 57/97 (58%)
Frame = -3 / -1
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC S
Sbjct: 347 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEK 168
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIHLSLQLFPH PA+LG E Q P P
Sbjct: 167 PPRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP 57
Score = 89.0 bits (188), Expect = 1e-016
Identities = 38/116 (32%), Positives = 62/116 (53%)
Frame = -2 / -3
Query: 644 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 465
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+ +
Sbjct: 348 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFIFRK 169
Query: 464 CPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
S ++ +I+YP QP T S P + G R PA+ +M ++ + +IL GP L
Sbjct: 168 TSSFQIRSKIIYPSQPATFSTPKQTCGLGERTPASFSMSLNILGKPVILFLGPGSL 1
>gb|BX680288.1|BX680288 BX680288 RS Pinus pinaster cDNA clone RS41E09, mRNA sequence
Length = 469
Score = 209 bits (450), Expect = 7e-053
Identities = 77/116 (66%), Positives = 98/116 (84%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQD 476
KG W+ EEDE+L+ HI HG G W S+PK AGL RCGKSCRLRWIN LRPDLKRG+F+++
Sbjct: 62 KGAWTKEEDERLIAHIEAHGEGSWRSLPKAAGLLRCGKSCRLRWIN*LRPDLKRGSFSEE 241
Query: 477 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
E+DLII+LH++LGN+WS IA +LPGRTDNEIKN WN+ +K+KL +G+DP +H+PL
Sbjct: 242 EDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHMKRKLLSRGLDPQSHRPL 409
Score = 100 bits (212), Expect = 5e-020
Identities = 45/120 (37%), Positives = 66/120 (55%)
Frame = -2 / -1
Query: 665 TAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDE 486
T++ +K +G+G+ + Q L RVP IL L++ PWQ CN RP V E+ V+ DDE
Sbjct: 430 TSLARQAKGTMGLGVESPAQQFPLHVRVPVILYLVVRSPWQSPCNKRPLVAEEGVEFDDE 251
Query: 485 VFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGP 306
+ F + + ++ Q+VYP QPT L +P G R P A+A+ V E L+ GP
Sbjct: 250 IVFFF*KASAFQIRTQLVYPSQPTALPTSQQPCGLGKRTP*ALAVGFNVCDETLVFFFGP 71
Score = 91.3 bits (193), Expect = 2e-017
Identities = 46/96 (47%), Positives = 51/96 (53%)
Frame = -3 / -2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS P +F M F F ISLSV PG+ AI DHL PR S
Sbjct: 405 GRWDWGSSPLLSNFLFMCVFQ*FFISLSVRPGNLPAISDHLLPRREWSLMMRSSSSSEKL 226
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG *FIH +LQLFPH SPA+LG E +P P
Sbjct: 225 PRFRSGRS*FIHRNLQLFPHRSSPAALGRERHEPSP 118
Score = 27.2 bits (53), Expect(2) = 0.90
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1 / +3
Query: 298 RGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
+ GP ++ S T + A A G LFP G R VG G*T
Sbjct: 63 KAPGPKKKTSVSSHTLKPTARAHGVLFPRPQGCCDVGRAVGCDG*T 200
Score = 26.3 bits (51), Expect(2) = 0.90
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVV+ C AR + D+E +E H+EE
Sbjct: 280 QQVVAYCREIARANGQRDKELLEHAHEEE 366
>gb|DR014691.1|DR014691 HEAT1_51_B07.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_B07_A029 3', mRNA sequence
Length = 906
Score = 209 bits (450), Expect = 7e-053
Identities = 82/136 (60%), Positives = 98/136 (72%)
Frame = +3 / +1
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 452
CC K KG W+ EED +L+ HI HG G W S+PK AGL RCGKSCRLRWINYLRPDL
Sbjct: 1 CCEKAHTNKGAWTQEEDARLVAHIQAHGEGGWRSLPKAAGLLRCGKSCRLRWINYLRPDL 180
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNT 632
KRG F++ E++LII+ H+ LGN+WS IA LPGRTDNEIKN WN+ IKKKL + G+DP +
Sbjct: 181 KRGNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGLDPKS 360
Query: 633 HKPLTEADHGGAAPTI 680
H PL E T+
Sbjct: 361 HLPLGEPRDSNTTYTV 408
Score = 120 bits (256), Expect = 4e-026
Identities = 53/138 (38%), Positives = 75/138 (54%)
Frame = -2 / -1
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G +G AV +KW + +GI + Q LD RVP +L L++ PP Q CN RP VPE
Sbjct: 414 GQNGVGSVAVTGFAKWEMRLGIESHSHQFFLDVRVPVVLYLVVRPPGQNPCNKRPFVPEA 235
Query: 506 SVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEF 327
V+ DDE+ F+ E +L++ Q+VYP +P T AP +P G APAA A+ V +
Sbjct: 234 GVEFDDELIFLFREVSTLQIGTQVVYPSEPATFPAPQQPCGLGKGAPAAFAVCLNVCDKA 55
Query: 326 LILLRGPEPLSQLLLVAA 273
+ P P + L+ A
Sbjct: 54 SVFFLSPGPFVSMSLLTA 1
Score = 57.0 bits (118), Expect(2) = 4e-018
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -3 / -2
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
P +SG R*FIH SLQLFPH +PA+LG E Q P PC
Sbjct: 188 PRFKSGRR*FIHRSLQLFPHRSNPAALGRERQPPSPC 78
Score = 56.1 bits (116), Expect(2) = 4e-018
Identities = 28/47 (59%), Positives = 29/47 (61%)
Frame = -3 / -2
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
S SG LGS P +FFLM F F ISLSV PG AI DHLFPR
Sbjct: 377 SPSGR*DLGSSPILTNFFLMCVFQWFFISLSVRPGKIRAIRDHLFPR 237
Score = 33.6 bits (67), Expect(2) = 0.003
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +1 / +2
Query: 544 CQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAP 687
C GG R R GTR SR++ IP+ SHL +TA P P
Sbjct: 272 CPGGRTTR*RTTGTRTSRKNW*EWDSIPSLISHLANPVTATLPTPFWP 415
Score = 28.6 bits (56), Expect(2) = 0.003
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +1 / +2
Query: 355 AMAAGALFPNSLGFKGAERVVG*GG*T 435
A AAGA FP G GA +V G G*T
Sbjct: 83 AKAAGAPFPRPQGCCGAGKVAGSDG*T 163
>gb|DR017658.1|DR017658 STRS1_17_E03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_17_E03_A034 5', mRNA sequence
Length = 724
Score = 209 bits (450), Expect = 7e-053
Identities = 82/136 (60%), Positives = 98/136 (72%)
Frame = +3 / +1
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 452
CC K KG W+ EED +L+ HI HG G W S+PK AGL RCGKSCRLRWINYLRPDL
Sbjct: 1 CCEKAHTNKGAWTQEEDARLVAHIQAHGEGGWRSLPKAAGLLRCGKSCRLRWINYLRPDL 180
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNT 632
KRG F++ E++LII+ H+ LGN+WS IA LPGRTDNEIKN WN+ IKKKL + G+DP +
Sbjct: 181 KRGNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGLDPKS 360
Query: 633 HKPLTEADHGGAAPTI 680
H PL E T+
Sbjct: 361 HLPLGEPRDSNTTYTV 408
Score = 116 bits (249), Expect = 4e-025
Identities = 52/138 (37%), Positives = 74/138 (53%)
Frame = -2 / -2
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G +G AV +KW + +GI + Q LD VP +L L++ PP Q CN RP VPE
Sbjct: 414 GQNGVGSVAVTGFAKWEMRLGIESHSHQFFLDVSVPVVLYLVVRPPGQNPCNKRPFVPEA 235
Query: 506 SVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEF 327
V+ DDE+ F+ E +L++ Q+VYP +P T AP +P G APAA A+ V +
Sbjct: 234 GVEFDDELVFLFREVSTLQIGTQVVYPSEPATFPAPQQPCGLGKGAPAAFAVCLNVCDKA 55
Query: 326 LILLRGPEPLSQLLLVAA 273
+ P P + L+ A
Sbjct: 54 SVFFLSPGPFVSMSLLTA 1
Score = 57.0 bits (118), Expect(2) = 5e-018
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -3 / -3
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
P +SG R*FIH SLQLFPH +PA+LG E Q P PC
Sbjct: 188 PRFKSGRR*FIHRSLQLFPHRSNPAALGRERQPPSPC 78
Score = 55.6 bits (115), Expect(2) = 5e-018
Identities = 28/47 (59%), Positives = 29/47 (61%)
Frame = -3 / -3
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
S SG LGS P +FFLM F F ISLSV PG AI DHLFPR
Sbjct: 377 SPSGR*DLGSSPILTNFFLM*VFQWFFISLSVRPGKIRAIRDHLFPR 237
Score = 30.4 bits (60), Expect(2) = 0.024
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +1 / +2
Query: 544 CQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAP 687
C GG R R GT SR++ IP+ SHL +TA P P
Sbjct: 272 CPGGRTTR*RTTGTLTSRKNW*EWDSIPSLISHLANPVTATLPTPFWP 415
Score = 28.6 bits (56), Expect(2) = 0.024
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +1 / +2
Query: 355 AMAAGALFPNSLGFKGAERVVG*GG*T 435
A AAGA FP G GA +V G G*T
Sbjct: 83 AKAAGAPFPRPQGCCGAGKVAGSDG*T 163
>gb|CO366297.1|CO366297 RTK1_27_B09.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_27_B09_A029 3', mRNA sequence
Length = 904
Score = 208 bits (449), Expect = 1e-052
Identities = 78/117 (66%), Positives = 95/117 (81%)
Frame = +3 / -1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L+KG W+PEED+ L+++I KHGHG W ++PK AGL RCGKSCRLRW NYLRPD+KRG F+
Sbjct: 886 LKKGPWTPEEDQILISYINKHGHGNWRALPKQAGLMRCGKSCRLRWTNYLRPDIKRGNFS 707
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
EE II LH +LGNRWS IA+ LPGRTDNEIKN+WN+ +KK+L Q G+DP TH P
Sbjct: 706 LKEEQTIIHLHQILGNRWSAIASHLPGRTDNEIKNVWNTHLKKRLLQIGVDPVTHAP 536
Score = 74.8 bits (157), Expect = 2e-012
Identities = 42/113 (37%), Positives = 57/113 (50%)
Frame = -2 / +2
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
VG + L + VP I LII ++ N P VP+D +Q+++ + F+ E P+
Sbjct: 542 VGYWVYPNLQEAFFQMSVPYIFYLIICSSGEV*GNS*PSVPKDLMQMNNSLLFLETEVPT 721
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
V QIV PPQ TTLS K G R P +M ML + E+LI R P L
Sbjct: 722 FYVRSQIVCPPQATTLSTSHKSCLLGQRTPISMTMLVDIGDEYLIFFRCPGSL 880
Score = 66.1 bits (138), Expect(2) = 2e-019
Identities = 28/47 (59%), Positives = 28/47 (59%)
Frame = -3 / +3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 500
G WV GS P C F FH F ISLSVLPG C AI DH FPR C
Sbjct: 537 GAWVTGSTPICRRRFFK*VFHTFFISLSVLPGRCEAIADHRFPRI*C 677
Score = 51.0 bits (105), Expect(2) = 2e-019
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = -3 / +3
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P SGLR*F+H QLFPH SPA LG+ Q P PC ++
Sbjct: 717 PRFMSGLR*FVHRRRQLFPHRISPACLGSARQFP*PCLLI 836
Score = 36.8 bits (74), Expect = 0.53
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +2 / -3
Query: 293 EKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLSE 442
+KG L * TH + +AW W L +Q + KEL VDKLSE
Sbjct: 884 KKGTLDT*RRSNTHLLYQQAWSWKLACAAQASRTYAMWKELSPAVDKLSE 735
>gb|CF470618.1|CF470618 RTDS1_13_H10.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_13_H10_A015 5', mRNA sequence
Length = 723
Score = 206 bits (445), Expect = 4e-052
Identities = 75/112 (66%), Positives = 93/112 (83%)
Frame = +3 / +1
Query: 267 HSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRP 446
H+CC K+ +++G WSPEED KL+ +IT HGHGCWSS+ + AGLQRCGKSCRLRW+NYLRP
Sbjct: 154 HNCCSKKAVKRGFWSPEEDMKLITYITTHGHGCWSSLSERAGLQRCGKSCRLRWMNYLRP 333
Query: 447 DLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
+KRG F+ +EE++II L A L NRW+QIA LPGRTD EIKN W+SC+KKK
Sbjct: 334 GIKRGNFSTEEENVIISLQARLNNRWAQIAKHLPGRTDTEIKNYWHSCLKKK 489
Score = 104 bits (222), Expect = 2e-021
Identities = 46/100 (46%), Positives = 59/100 (59%)
Frame = -2 / -1
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
L L A VP ILD I P WQ+ CNL PPV ++ DD++ F G+ P+L WPQ+V+PP
Sbjct: 489 LFLQAAVPVILDFSIRPSWQVFCNLCPPVI*SGLKTDDDILFFSGKIPTLNPWPQVVHPP 310
Query: 422 QPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPE 303
QP TL+ PL+ S PA MA+ + E I L PE
Sbjct: 309 QPATLATPLQSSSL*K**PATMAVCSDISDELHIFLGRPE 190
Score = 57.4 bits (119), Expect(2) = 8e-012
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = -3 / -2
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P L GL+*FIHL+LQL PH SPA ++ QQPWPC V+
Sbjct: 347 PRLIPGLK*FIHLNLQLLPHRCSPALSESDDQQPWPCVVI 228
Score = 40.9 bits (83), Expect(2) = 1e-005
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +2 / +3
Query: 266 AFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLSE 442
A LL Q ++ LV G E H ++ PWLL + + W + V +EL EVD+L E
Sbjct: 153 AQLL*QESCKERLLVARGRYEAHHLYHYTRPWLLVITFRESWTAAVWQELQVEVDELLE 329
Score = 39.6 bits (80), Expect = 0.079
Identities = 26/67 (38%), Positives = 32/67 (47%)
Frame = +1 / +2
Query: 271 LAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQT 450
+A + * SG R++ +S + AM AG F L G RV G*GG*T *GQ
Sbjct: 158 IAVARKL*REASGRPRKI*SSSLISLHTAMVAGHHFQRELDCSGVARVAG*GG*TT*GQG 337
Query: 451 SREGHSP 471
G P
Sbjct: 338 LSVGIFP 358
Score = 34.1 bits (68), Expect(2) = 8e-012
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
+FF FLIS+SVLPG C AI HL
Sbjct: 491 AFFFRQLCQ*FLISVSVLPGKCFAICAHL 405
Score = 32.7 bits (65), Expect = 9.3
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = -1 / -3
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACS 277
+* LAS S STS NS T Q + +S+HG * S+ P+ TR+ +C
Sbjct: 343 A*SLASSSSSTSTCNSCHTAAVQLSLKVMTSNHGRV**YK**ASYLPRATRSLSLQLSCY 164
Query: 276 SKNA 265
S A
Sbjct: 163 SNCA 152
Score = 29.5 bits (58), Expect(2) = 1e-005
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRR 600
Q +CQ G I++SRI GT A R+
Sbjct: 422 QNTCQEGRILKSRITGTAA*RK 487
>gb|DR057958.1|DR057958 RTNIT1_8_G05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_8_G05_A029 5', mRNA sequence
Length = 849
Score = 206 bits (444), Expect = 5e-052
Identities = 77/116 (66%), Positives = 97/116 (83%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQD 476
KG W+ EED +L+ +I +G G W S+PK AGL RCGKSCRLRWINYLRPDLKRG+F ++
Sbjct: 1 KGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYLRPDLKRGSFTEE 180
Query: 477 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 181 EDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 348
Score = 110 bits (234), Expect = 5e-023
Identities = 49/125 (39%), Positives = 70/125 (56%)
Frame = -2 / -1
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 378 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 199
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DDE F E +LE+ Q+VYP QPT LSA +P G PAA A+ V +E ++
Sbjct: 198 DDEFVFFFCEASTLEIGTQVVYPSQPTALSASRQPCSLGKGTPAAFAVGSNVSNEAVVFF 19
Query: 314 RGPEP 300
P P
Sbjct: 18 FCPGP 4
Score = 103 bits (220), Expect = 4e-021
Identities = 52/96 (54%), Positives = 56/96 (58%)
Frame = -3 / -2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 344 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 165
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL SPA+LG E Q P P
Sbjct: 164 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSP 57
Score = 35.9 bits (72), Expect(2) = 0.005
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1 / +2
Query: 298 RGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
+G G ++ S +T + A AAG FP G + AER VG G*T
Sbjct: 2 KGPGQKKKTTASLLTFEPTAKAAGVPFPRLQGCRDAERAVGCDG*T 139
Score = 25.4 bits (49), Expect(2) = 9.3
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 239 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 337
Score = 25.4 bits (49), Expect(2) = 0.005
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 219 QQVVSYCRKIAGADGQRDKELLEHSHQEK 305
Score = 24.4 bits (47), Expect(2) = 9.3
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 81 SQGCRAAEMRKEL*AAMDKL 140
>gb|DR167765.1|DR167765 RTPHOS1_20_H05.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_20_H05_A029 5', mRNA sequence
Length = 806
Score = 205 bits (443), Expect = 7e-052
Identities = 77/115 (66%), Positives = 93/115 (80%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQD 476
KG W+PEED+ L+++I KHGHG W ++PK AGL RCGKSCRLRW NYLRPD+KRG F+
Sbjct: 2 KGPWTPEEDQILISYINKHGHGNWRALPKQAGLMRCGKSCRLRWTNYLRPDIKRGNFSLK 181
Query: 477 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
EE II LH +LGNRWS IA+ LPGRTDNEIKN+WN+ +KK+L Q G+DP TH P
Sbjct: 182 EEQTIIHLHQILGNRWSAIASHLPGRTDNEIKNVWNTHLKKRLLQIGVDPVTHAP 346
Score = 74.8 bits (157), Expect = 2e-012
Identities = 42/113 (37%), Positives = 57/113 (50%)
Frame = -2 / -2
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
VG + L + VP I LII ++ N P VP+D +Q+++ + F+ E P+
Sbjct: 340 VGYWVYPNLQEAFFQMSVPYIFYLIICSSGEV*GNS*PSVPKDLMQMNNSLLFLETEVPT 161
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
V QIV PPQ TTLS K G R P +M ML + E+LI R P L
Sbjct: 160 FYVRSQIVCPPQATTLSTSHKSCLLGQRTPISMTMLVDIGDEYLIFFRCPGSL 2
Score = 66.1 bits (138), Expect(2) = 2e-019
Identities = 28/47 (59%), Positives = 28/47 (59%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 500
G WV GS P C F FH F ISLSVLPG C AI DH FPR C
Sbjct: 345 GAWVTGSTPICRRRFFK*VFHTFFISLSVLPGRCEAIADHRFPRI*C 205
Score = 51.0 bits (105), Expect(2) = 2e-019
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = -3 / -3
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P SGLR*F+H QLFPH SPA LG+ Q P PC ++
Sbjct: 165 PRFMSGLR*FVHRRRQLFPHRISPACLGSARQFP*PCLLI 46
Score = 36.3 bits (73), Expect = 0.73
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2 / +1
Query: 296 KGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLSE 442
KG L * TH + +AW W L +Q + KEL VDKLSE
Sbjct: 1 KGTLDT*RRSNTHLLYQQAWSWKLACAAQASRTYAMWKELSPAVDKLSE 147
>gb|CF396041.1|CF396041 RTDS2_20_C12.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_20_C12_A021 5', mRNA sequence
Length = 607
Score = 205 bits (442), Expect = 9e-052
Identities = 74/112 (66%), Positives = 93/112 (83%)
Frame = +3 / +3
Query: 267 HSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRP 446
H+CC K+ +++G WSPEED KL+ +IT HGHGCWSS+ + AGLQRCGKSCRLRW+NYLRP
Sbjct: 156 HNCCSKKAVKRGFWSPEEDMKLITYITTHGHGCWSSLSERAGLQRCGKSCRLRWMNYLRP 335
Query: 447 DLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
+KRG F+ +EE++II L A L NRW+QIA LPGRTD EIKN W++C+KKK
Sbjct: 336 GIKRGNFSTEEENVIISLQARLNNRWAQIAKHLPGRTDTEIKNYWHNCLKKK 491
Score = 100 bits (212), Expect = 5e-020
Identities = 45/100 (45%), Positives = 58/100 (58%)
Frame = -2 / -3
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
L L A VP ILD I P WQ+ CNL PPV ++ DD++ F G+ +L WPQ+V+PP
Sbjct: 491 LFLQAVVPVILDFSIRPSWQVFCNLCPPVI*SGLKTDDDILFFSGKISTLNPWPQVVHPP 312
Query: 422 QPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPE 303
QP TL+ PL+ S PA MA+ + E I L PE
Sbjct: 311 QPATLATPLQSSSL*K**PATMAVCSDISDELHIFLGRPE 192
Score = 57.4 bits (119), Expect(2) = 8e-012
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = -3 / -1
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P L GL+*FIHL+LQL PH SPA ++ QQPWPC V+
Sbjct: 349 PRLIPGLK*FIHLNLQLLPHRCSPALSESDDQQPWPCVVI 230
Score = 40.9 bits (83), Expect(2) = 1e-005
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +2 / +2
Query: 266 AFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLSE 442
A LL Q ++ LV G E H ++ PWLL + + W + V +EL EVD+L E
Sbjct: 155 AQLL*QESCKERLLVARGRYEAHHLYHYTRPWLLVITFRESWTATVWQELQVEVDELLE 331
Score = 39.1 bits (79), Expect = 0.11
Identities = 24/59 (40%), Positives = 30/59 (50%)
Frame = +1 / +1
Query: 271 LAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQ 447
+A + * SG R++ +S + AM AG F L G RV G*GG*T *GQ
Sbjct: 160 IAVARKL*REASGRPRKI*SSSLISLHTAMVAGHHFQRELDCNGVARVAG*GG*TT*GQ 336
Score = 34.1 bits (68), Expect(2) = 8e-012
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
+FF FLIS+SVLPG C AI HL
Sbjct: 493 AFFFRQLCQ*FLISVSVLPGKCFAICAHL 407
Score = 33.1 bits (66), Expect = 6.8
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = -1 / -2
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACS 277
+* LAS S STS NS T Q + +S+HG * S+ P+ TR+ +C
Sbjct: 345 A*SLASSSSSTSTCNSCHTVAVQLSLKVMTSNHGRV**YK**ASYLPRATRSLSLQLSCY 166
Query: 276 SKNA 265
S A
Sbjct: 165 SNCA 154
Score = 29.5 bits (58), Expect(2) = 1e-005
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRR 600
Q +CQ G I++SRI GT A R+
Sbjct: 424 QNTCQEGRILKSRITGTTA*RK 489
>gb|CX648418.1|CX648418 COLD1_28_B12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_28_B12_A029 5', mRNA sequence
Length = 868
Score = 204 bits (439), Expect = 2e-051
Identities = 76/115 (66%), Positives = 96/115 (83%)
Frame = +3 / +3
Query: 300 GLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDE 479
G W+ EED +L+ +I +G G W S+PK AGL RCGKSCRLRWINYLRPDLKRG+F ++E
Sbjct: 48 GAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYLRPDLKRGSFTEEE 227
Query: 480 EDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 228 DELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 392
Score = 111 bits (238), Expect = 1e-023
Identities = 50/126 (39%), Positives = 71/126 (56%)
Frame = -2 / -3
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 422 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 243
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DDE F E +LE+ Q+VYP QPT LSA +P G PAA A+ V +E ++
Sbjct: 242 DDEFVFFFCEASTLEIGTQVVYPSQPTALSASRQPCSLGKGTPAAFAVGSNVSNEAVVFF 63
Query: 314 RGPEPL 297
P PL
Sbjct: 62 FCPGPL 45
Score = 103 bits (220), Expect = 4e-021
Identities = 52/96 (54%), Positives = 56/96 (58%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 388 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 209
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL SPA+LG E Q P P
Sbjct: 208 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSP 101
Score = 35.9 bits (72), Expect(2) = 0.005
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1 / +1
Query: 298 RGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
+G G ++ S +T + A AAG FP G + AER VG G*T
Sbjct: 46 KGPGQKKKTTASLLTFEPTAKAAGVPFPRLQGCRDAERAVGCDG*T 183
Score = 25.4 bits (49), Expect(2) = 9.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 283 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 381
Score = 25.4 bits (49), Expect(2) = 0.005
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 263 QQVVSYCRKIAGADGQRDKELLEHSHQEK 349
Score = 24.4 bits (47), Expect(2) = 9.2
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +2
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 125 SQGCRAAEMRKEL*AAMDKL 184
>gb|DR014928.1|DR014928 HEAT1_52_A11.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_52_A11_A029 5', mRNA sequence
Length = 854
Score = 204 bits (439), Expect = 2e-051
Identities = 76/116 (65%), Positives = 94/116 (81%)
Frame = +3 / +1
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
++G EED++L +I HG GCW S+PK AGL RCGKSCRLRWINYLRPDLKRG F++
Sbjct: 1 KQGSLDQEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGGFSE 180
Query: 474 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T +P
Sbjct: 181 DEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRRP 348
Score = 108 bits (230), Expect = 2e-022
Identities = 54/97 (55%), Positives = 57/97 (58%)
Frame = -3 / -1
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC S
Sbjct: 350 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEK 171
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R*FIHLSLQLFPH PA+LG E Q P P
Sbjct: 170 PPRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP 60
Score = 85.4 bits (180), Expect = 1e-015
Identities = 37/116 (31%), Positives = 61/116 (52%)
Frame = -2 / -3
Query: 644 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 465
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+ +
Sbjct: 351 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFIFRK 172
Query: 464 CPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
S ++ +I+YP QP T S P + G R PA+ +M ++ + +IL PL
Sbjct: 171 TSSFQIRSKIIYPSQPATFSTPKQTCGLGERTPASFSMSLNILGKPVILFLVQAPL 4
>gb|DR079932.1|DR079932 RTFEPL1_18_F11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_18_F11_A029 5', mRNA sequence
Length = 689
Score = 204 bits (439), Expect = 2e-051
Identities = 75/114 (65%), Positives = 95/114 (83%)
Frame = +3 / +3
Query: 300 GLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDE 479
G W+ EED++L+ +I HG G W+S+PK AGL RCGKSCRLRW+NYLRP LKRG F++DE
Sbjct: 3 GAWTREEDDRLIQYIQAHGEGGWNSLPKAAGLLRCGKSCRLRWMNYLRPQLKRGNFSEDE 182
Query: 480 EDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP TH+P
Sbjct: 183 DDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTHRP 344
Score = 100 bits (214), Expect = 3e-020
Identities = 51/97 (52%), Positives = 53/97 (54%)
Frame = -3 / -2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G V GS P +SF EF FLISLSV PG AI DHL PR AC S
Sbjct: 343 GRCVRGSTPMLISFLFRCEFQ*FLISLSVRPGKRPAIRDHLLPRRACSLRIRSSSSSEKF 164
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
P G R*FIHLSLQL PH PA+LG E Q P PC
Sbjct: 163 PRFS*GRR*FIHLSLQLLPHRSRPAALGREFQPPSPC 53
Score = 82.6 bits (174), Expect = 9e-015
Identities = 40/116 (34%), Positives = 64/116 (55%)
Frame = -2 / -1
Query: 653 SLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 474
+L K V GINA +L L RVP ILDL++ Q P + + SVQ ++++ FV
Sbjct: 356 NLLKRTVRQGINAHADKLSLQMRVPVILDLVVCSTGQTTSYQGPLIAKKSVQFENKIVFV 177
Query: 473 LGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGP 306
+ P+ ++ +I++P QP T + P + G R PAA++M V+ + +IL P
Sbjct: 176 FRKIPTFQLRAKIIHPSQPATFATPKQTCGLGERVPAALSMRLNVLDKPVILFSRP 9
Score = 35.0 bits (70), Expect(2) = 0.20
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2 / +2
Query: 320 G*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLS 439
G*+ + H+ AW LEL Q R ++ V ++L AE+D+LS
Sbjct: 23 G*QAYPIHSGAWRGRLELSPQGRRSASVWQKLQAEMDELS 142
Score = 24.4 bits (47), Expect(2) = 0.20
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 565 RSRIYGTRASRRS*GRKALIP 627
RSRI GTR R S ALIP
Sbjct: 268 RSRITGTRI*RESLSAWALIP 330
>gb|DR683171.1|DR683171 EST1073247 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAE88, mRNA sequence
Length = 846
Score = 203 bits (438), Expect = 3e-051
Identities = 74/112 (66%), Positives = 91/112 (81%)
Frame = +3 / -3
Query: 267 HSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRP 446
H+CC K+ +++G W PEED KL+ +IT HGHGCWSS+ + AGLQRCGKSCRLRW+NYLRP
Sbjct: 841 HNCCSKKAVKRGFWLPEEDMKLITYITTHGHGCWSSLSERAGLQRCGKSCRLRWMNYLRP 662
Query: 447 DLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
+KRG F+ +EE++II L A L NRW+QIA LPGRTD EIKN W SC+KKK
Sbjct: 661 GIKRGNFSTEEENVIISLQARLNNRWAQIAKHLPGRTDTEIKNYWRSCLKKK 506
Score = 102 bits (218), Expect = 7e-021
Identities = 45/100 (45%), Positives = 58/100 (58%)
Frame = -2 / +2
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
L L A P ILD I P WQ+ CNL PPV ++ DD++ F G+ P+L WPQ+V+PP
Sbjct: 506 LFLQAAAPVILDFSIRPSWQVFCNLCPPVI*SGLKTDDDILFFSGKIPTLNPWPQVVHPP 685
Query: 422 QPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPE 303
QP TL+ PL+ S PA MA+ + E I L PE
Sbjct: 686 QPATLATPLQSSSL*K**PATMAVCSDISDELHIFLGQPE 805
Score = 57.4 bits (119), Expect(2) = 1e-011
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = -3 / +3
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P L GL+*FIHL+LQL PH SPA ++ QQPWPC V+
Sbjct: 648 PRLIPGLK*FIHLNLQLLPHRCSPALSESDDQQPWPCVVI 767
Score = 40.9 bits (83), Expect(2) = 5e-005
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +2 / -2
Query: 266 AFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLSE 442
A LL Q ++ LV G E H ++ PWLL + + W + V +EL EVD+L E
Sbjct: 842 AQLL*QESCKERLLVARGRYEAHHLYHYTRPWLLVITFRESWTAAVWQELQVEVDELLE 666
Score = 39.1 bits (79), Expect = 0.11
Identities = 26/67 (38%), Positives = 32/67 (47%)
Frame = +1 / -1
Query: 271 LAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQT 450
+A + * SG R++ +S + AM AG F L G RV G*GG*T *GQ
Sbjct: 837 IAVARKL*REASGCPRKI*SSSLISLHTAMVAGHHFQRELDCSGVARVAG*GG*TT*GQG 658
Query: 451 SREGHSP 471
G P
Sbjct: 657 LSVGIFP 637
Score = 33.6 bits (67), Expect(2) = 1e-011
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / +3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
+FF FLIS+SVLPG C AI HL
Sbjct: 504 AFFFRQLRQ*FLISVSVLPGKCFAICAHL 590
Score = 32.7 bits (65), Expect = 9.3
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = -1 / +1
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACS 277
+* LAS S STS NS T Q + +S+HG * S+ P+ TR+ +C
Sbjct: 652 A*SLASSSSSTSTCNSCHTAAVQLSLKVMTSNHGRV**YK**ASYLPRATRSLSLQLSCY 831
Query: 276 SKNA 265
S A
Sbjct: 832 SNCA 843
Score = 27.2 bits (53), Expect(2) = 5e-005
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1 / -1
Query: 535 QRSCQGGLIMRSRIYGTRASRR 600
Q +CQ G I++SRI G A R+
Sbjct: 573 QNTCQEGRILKSRITGAAA*RK 508
>gb|DR683172.1|DR683172 EST1073248 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAE88 3' end, mRNA sequence
Length = 779
Score = 203 bits (438), Expect = 3e-051
Identities = 74/112 (66%), Positives = 91/112 (81%)
Frame = +3 / +1
Query: 267 HSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRP 446
H+CC K+ +++G W PEED KL+ +IT HGHGCWSS+ + AGLQRCGKSCRLRW+NYLRP
Sbjct: 190 HNCCSKKAVKRGFWLPEEDMKLITYITTHGHGCWSSLSERAGLQRCGKSCRLRWMNYLRP 369
Query: 447 DLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
+KRG F+ +EE++II L A L NRW+QIA LPGRTD EIKN W SC+KKK
Sbjct: 370 GIKRGNFSTEEENVIISLQARLNNRWAQIAKHLPGRTDTEIKNYWRSCLKKK 525
Score = 102 bits (218), Expect = 7e-021
Identities = 45/100 (45%), Positives = 58/100 (58%)
Frame = -2 / -3
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
L L A P ILD I P WQ+ CNL PPV ++ DD++ F G+ P+L WPQ+V+PP
Sbjct: 525 LFLQAAAPVILDFSIRPSWQVFCNLCPPVI*SGLKTDDDILFFSGKIPTLNPWPQVVHPP 346
Query: 422 QPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPE 303
QP TL+ PL+ S PA MA+ + E I L PE
Sbjct: 345 QPATLATPLQSSSL*K**PATMAVCSDISDELHIFLGQPE 226
Score = 57.4 bits (119), Expect(2) = 1e-011
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = -3 / -1
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P L GL+*FIHL+LQL PH SPA ++ QQPWPC V+
Sbjct: 383 PRLIPGLK*FIHLNLQLLPHRCSPALSESDDQQPWPCVVI 264
Score = 40.9 bits (83), Expect(2) = 5e-005
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +2 / +3
Query: 266 AFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLSE 442
A LL Q ++ LV G E H ++ PWLL + + W + V +EL EVD+L E
Sbjct: 189 AQLL*QESCKERLLVARGRYEAHHLYHYTRPWLLVITFRESWTAAVWQELQVEVDELLE 365
Score = 39.1 bits (79), Expect = 0.11
Identities = 26/67 (38%), Positives = 32/67 (47%)
Frame = +1 / +2
Query: 271 LAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQT 450
+A + * SG R++ +S + AM AG F L G RV G*GG*T *GQ
Sbjct: 194 IAVARKL*REASGCPRKI*SSSLISLHTAMVAGHHFQRELDCSGVARVAG*GG*TT*GQG 373
Query: 451 SREGHSP 471
G P
Sbjct: 374 LSVGIFP 394
Score = 33.6 bits (67), Expect(2) = 1e-011
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
+FF FLIS+SVLPG C AI HL
Sbjct: 527 AFFFRQLRQ*FLISVSVLPGKCFAICAHL 441
Score = 32.7 bits (65), Expect = 9.3
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = -1 / -2
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACS 277
+* LAS S STS NS T Q + +S+HG * S+ P+ TR+ +C
Sbjct: 379 A*SLASSSSSTSTCNSCHTAAVQLSLKVMTSNHGRV**YK**ASYLPRATRSLSLQLSCY 200
Query: 276 SKNA 265
S A
Sbjct: 199 SNCA 188
Score = 27.2 bits (53), Expect(2) = 5e-005
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRR 600
Q +CQ G I++SRI G A R+
Sbjct: 458 QNTCQEGRILKSRITGAAA*RK 523
>gb|DT631296.1|DT631296 EST1146227 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF723 3' end, mRNA sequence
Length = 795
Score = 203 bits (438), Expect = 3e-051
Identities = 74/112 (66%), Positives = 91/112 (81%)
Frame = +3 / +3
Query: 267 HSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRP 446
H+CC K+ +++G W PEED KL+ +IT HGHGCWSS+ + AGLQRCGKSCRLRW+NYLRP
Sbjct: 198 HNCCSKKAVKRGFWLPEEDMKLITYITTHGHGCWSSLSERAGLQRCGKSCRLRWMNYLRP 377
Query: 447 DLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
+KRG F+ +EE++II L A L NRW+QIA LPGRTD EIKN W SC+KKK
Sbjct: 378 GIKRGNFSTEEENVIISLQARLNNRWAQIAKHLPGRTDTEIKNYWRSCLKKK 533
Score = 102 bits (218), Expect = 7e-021
Identities = 45/100 (45%), Positives = 58/100 (58%)
Frame = -2 / -2
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
L L A P ILD I P WQ+ CNL PPV ++ DD++ F G+ P+L WPQ+V+PP
Sbjct: 533 LFLQAAAPVILDFSIRPSWQVFCNLCPPVI*SGLKTDDDILFFSGKIPTLNPWPQVVHPP 354
Query: 422 QPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPE 303
QP TL+ PL+ S PA MA+ + E I L PE
Sbjct: 353 QPATLATPLQSSSL*K**PATMAVCSDISDELHIFLGQPE 234
Score = 57.4 bits (119), Expect(2) = 1e-011
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = -3 / -3
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P L GL+*FIHL+LQL PH SPA ++ QQPWPC V+
Sbjct: 391 PRLIPGLK*FIHLNLQLLPHRCSPALSESDDQQPWPCVVI 272
Score = 40.9 bits (83), Expect(2) = 5e-005
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +2 / +2
Query: 266 AFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLSE 442
A LL Q ++ LV G E H ++ PWLL + + W + V +EL EVD+L E
Sbjct: 197 AQLL*QESCKERLLVARGRYEAHHLYHYTRPWLLVITFRESWTAAVWQELQVEVDELLE 373
Score = 39.1 bits (79), Expect = 0.11
Identities = 26/67 (38%), Positives = 32/67 (47%)
Frame = +1 / +1
Query: 271 LAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQT 450
+A + * SG R++ +S + AM AG F L G RV G*GG*T *GQ
Sbjct: 202 IAVARKL*REASGCPRKI*SSSLISLHTAMVAGHHFQRELDCSGVARVAG*GG*TT*GQG 381
Query: 451 SREGHSP 471
G P
Sbjct: 382 LSVGIFP 402
Score = 33.6 bits (67), Expect(2) = 1e-011
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
+FF FLIS+SVLPG C AI HL
Sbjct: 535 AFFFRQLRQ*FLISVSVLPGKCFAICAHL 449
Score = 32.7 bits (65), Expect = 9.3
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = -1 / -1
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACS 277
+* LAS S STS NS T Q + +S+HG * S+ P+ TR+ +C
Sbjct: 387 A*SLASSSSSTSTCNSCHTAAVQLSLKVMTSNHGRV**YK**ASYLPRATRSLSLQLSCY 208
Query: 276 SKNA 265
S A
Sbjct: 207 SNCA 196
Score = 27.2 bits (53), Expect(2) = 5e-005
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRR 600
Q +CQ G I++SRI G A R+
Sbjct: 466 QNTCQEGRILKSRITGAAA*RK 531
>gb|CX646616.1|CX646616 COLD1_10_A05.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_10_A05_A029 5', mRNA sequence
Length = 887
Score = 203 bits (437), Expect = 5e-051
Identities = 76/116 (65%), Positives = 96/116 (82%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQD 476
KG W+ EED +L+ +I +G G W S+PK AG RCGKSCRLRWINYLRPDLKRG+F ++
Sbjct: 33 KGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGPPRCGKSCRLRWINYLRPDLKRGSFTEE 212
Query: 477 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 213 EDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 380
Score = 110 bits (235), Expect = 3e-023
Identities = 49/125 (39%), Positives = 70/125 (56%)
Frame = -2 / -1
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 410 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 231
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DDE F E +LE+ Q+VYP QPT LSA +P G PAA A+ V +E ++
Sbjct: 230 DDEFVFFFCEASTLEIGTQVVYPSQPTALSASRRPCSLGKGTPAAFAVGSNVSNEAVVFF 51
Query: 314 RGPEP 300
P P
Sbjct: 50 FCPGP 36
Score = 101 bits (216), Expect = 1e-020
Identities = 51/96 (53%), Positives = 55/96 (57%)
Frame = -3 / -2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 376 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 197
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL PA+LG E Q P P
Sbjct: 196 PRLRSGRR*FIHRSLQLFPHLGGPAALGRERQLPSP 89
Score = 35.4 bits (71), Expect(2) = 0.007
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1 / +1
Query: 298 RGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
+G G ++ S +T + A AAG FP G + AER VG G*T
Sbjct: 34 KGPGQKKKTTASLLTFEPTAKAAGVPFPRLQGRRDAERAVGCDG*T 171
Score = 25.4 bits (49), Expect(2) = 9.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 271 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 369
Score = 25.4 bits (49), Expect(2) = 0.007
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 251 QQVVSYCRKIAGADGQRDKELLEHSHQEK 337
Score = 24.4 bits (47), Expect(2) = 9.2
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +2
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 113 SQGCRAAEMRKEL*AAMDKL 172
>gb|CF671993.1|CF671993 RTCNT1_60_D02.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_60_D02_A029 5', mRNA sequence
Length = 557
Score = 200 bits (432), Expect = 2e-050
Identities = 75/122 (61%), Positives = 98/122 (80%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K ++KG W+ +ED+ L+++ITKHGHG W ++PK AGL RCGKSCRLRW NY
Sbjct: 20 MGRAPCCDKMGVKKGPWTLDEDKILVDYITKHGHGNWRALPKQAGLLRCGKSCRLRWTNY 199
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
L+PD+KRG F+ +EED II+LH ++GNRWS IA+ LPGRTDNEIKN+WN+ +KK+L +
Sbjct: 200 LKPDIKRGNFSPEEEDQIIKLHELIGNRWSTIASYLPGRTDNEIKNVWNTHLKKRLARMK 379
Query: 618 ID 623
D
Sbjct: 380 AD 385
Score = 105 bits (224), Expect = 1e-021
Identities = 48/86 (55%), Positives = 52/86 (60%)
Frame = -3 / -3
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
F FH FLISLSVLPG AI DHLFP ++C S PLL SG R*F+H
Sbjct: 360 FFKWVFHTFLISLSVLPGKYEAIVDHLFPMSSCNLII*SSSSGLKFPLLMSGFR*FVHRR 181
Query: 418 LQLFPHL*SPASLGTELQQPWPCFVM 341
QLFPH SPA LG+ Q PWPC VM
Sbjct: 180 RQLFPHRRSPACLGSARQLPWPCLVM 103
Score = 85.4 bits (180), Expect = 1e-015
Identities = 38/109 (34%), Positives = 57/109 (52%)
Frame = -2 / -2
Query: 584 VP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
VP +LDLI+ WQ+R N P +P + +Q ++ +F + PS +V Q++ PPQ TTLS
Sbjct: 346 VPHVLDLIVGSSWQVRSNSGPSIPYELMQFNNLIFLFWTKIPSFDVGFQVIRPPQATTLS 167
Query: 404 APLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
+P G P AMAM V+ ++ I + P + AR H
Sbjct: 166 TSQEPCLLGQCTPVAMAMFGNVVDQYFIFV*SPGAFLYSHFITARSSAH 20
Score = 38.6 bits (78), Expect = 0.15
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = +1 / +3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
W +LA * + G +++ T +MAMA G P+ G ERVV GG
Sbjct: 21 WAELLAVIKWE*RKAPGL*TKIKYWSTTLPNMAMATGVHCPSKQGSCDVERVVACGGRIT 200
Query: 439 *GQTSREG 462
* TS+EG
Sbjct: 201 *NPTSKEG 224
Score = 33.1 bits (66), Expect = 6.8
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2 / +1
Query: 323 *ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLSE 442
* T H + WPW L +Q A + KEL VD+L E
Sbjct: 85 *NTGRLHYQTWPWQLACTAQASRAPAMWKELSPAVDELPE 204
>gb|CF402623.1|CF402623 RTWW1_21_B11.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_21_B11_A015 5', mRNA sequence
Length = 755
Score = 200 bits (431), Expect = 3e-050
Identities = 76/116 (65%), Positives = 96/116 (82%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQD 476
KG + EED +L+ +I +G G W S+PK AGL RCGKSCRLRWINYLRPDLKRG+F ++
Sbjct: 10 KGACTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYLRPDLKRGSFTEE 189
Query: 477 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 190 EDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 357
Score = 105 bits (223), Expect = 1e-021
Identities = 46/114 (40%), Positives = 67/114 (58%)
Frame = -2 / -3
Query: 662 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 483
A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+ DDE
Sbjct: 375 AAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEFDDEF 196
Query: 482 FFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLI 321
F E +LE+ Q+VYP QPT LSA +P G PAA A+ V +E ++
Sbjct: 195 VFFFCEASTLEIGTQVVYPSQPTALSASRQPCSLGKGTPAAFAVGSNVSNEAVV 34
Score = 103 bits (220), Expect = 4e-021
Identities = 52/96 (54%), Positives = 56/96 (58%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 353 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 174
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL SPA+LG E Q P P
Sbjct: 173 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSP 66
Score = 31.8 bits (63), Expect(2) = 0.079
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +1 / +2
Query: 298 RGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
+G ++ S +T + A AAG FP G + AER VG G*T
Sbjct: 11 KGPVQKKKTTASLLTFEPTAKAAGVPFPRLQGCRDAERAVGCDG*T 148
Score = 25.4 bits (49), Expect(2) = 9.3
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 248 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 346
Score = 25.4 bits (49), Expect(2) = 0.079
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 228 QQVVSYCRKIAGADGQRDKELLEHSHQEK 314
Score = 24.4 bits (47), Expect(2) = 9.3
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 90 SQGCRAAEMRKEL*AAMDKL 149
>gb|AW064634.1|AW064634 ST33H05 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST33H05, mRNA sequence
Length = 584
Score = 198 bits (427), Expect = 1e-049
Identities = 75/118 (63%), Positives = 92/118 (77%)
Frame = +3 / +2
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
+ MGR CC KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWI
Sbjct: 98 LNMGRAPCCSNGDRNKGAWTKEEDDRLIQYIKVHGEGCWRSLPKAAGLLRCGKSCRLRWI 277
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
NYLRPDLKRG F++DE+DLI++LHA+LGN+WS IA +L RTDNEIKN W S +K+KL
Sbjct: 278 NYLRPDLKRGFFSEDEDDLILKLHALLGNKWSLIAGRLXRRTDNEIKNYWXSHLKRKL 451
Score = 88.6 bits (187), Expect = 1e-016
Identities = 40/114 (35%), Positives = 63/114 (55%)
Frame = -2 / -2
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
L RVP +L L+I Q RP + ++ VQ ++++ FV GE PS E+ +I+YP Q
Sbjct: 442 LQMRVPVVLYLVICSSXQTASYQRPLISKEGVQFENKIIFVFGEKPSFEIRAKIIYPSQS 263
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
T + P + G RAPA ++M ++ + +IL GP + + AAR P H+
Sbjct: 262 ATFATPKQTCGLGERAPATLSMNLNILDKPVILFFGPGSFVSVTVRAARRPSHV 101
Score = 86.3 bits (182), Expect = 7e-016
Identities = 46/85 (54%), Positives = 48/85 (56%)
Frame = -3 / -3
Query: 607 LSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FI 428
+SF E F ISLSV AI DHLFPR AC S P LRSG R*FI
Sbjct: 453 VSFRFRCEXQ*FFISLSVRLXKRPAIKDHLFPRRACSLRIRSSSSSEKNPRLRSGRR*FI 274
Query: 427 HLSLQLFPHL*SPASLGTELQQPWP 353
HLSLQL PH PA+LG E QQP P
Sbjct: 273 HLSLQLLPHRSRPAALGRERQQPSP 199
>gb|CF389081.1|CF389081 RTDR2_13_A10.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_13_A10_A021 5', mRNA
sequence
Length = 743
Score = 196 bits (423), Expect = 4e-049
Identities = 74/110 (67%), Positives = 93/110 (84%)
Frame = +3 / +2
Query: 315 EEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLII 494
EED +L+ +I +G G W S+PK AGL RCGKSCRLRWINYLRPDLKRG+F ++E++LII
Sbjct: 8 EEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYLRPDLKRGSFTEEEDELII 187
Query: 495 ELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 188 KLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 337
Score = 105 bits (224), Expect = 1e-021
Identities = 46/118 (38%), Positives = 67/118 (56%)
Frame = -2 / -2
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 367 GDIVAAVGLTERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 188
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLI 321
DDE F E +LE+ Q+VYP QPT LSA +P G PAA + V +E ++
Sbjct: 187 DDEFVFFFCEASTLEIGTQVVYPSQPTALSASRQPCSLGKGTPAAFTVGSNVSNEAVV 14
Score = 103 bits (220), Expect = 4e-021
Identities = 52/96 (54%), Positives = 56/96 (58%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 333 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 154
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL SPA+LG E Q P P
Sbjct: 153 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSP 46
Score = 29.5 bits (58), Expect(2) = 0.35
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1 / +3
Query: 337 IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
+T + AAG FP G + AER VG G*T
Sbjct: 30 LTFEPTVKAAGVPFPRLQGCRDAERAVGCDG*T 128
Score = 25.4 bits (49), Expect(2) = 9.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / +3
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 228 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 326
Score = 25.4 bits (49), Expect(2) = 0.35
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 208 QQVVSYCRKIAGADGQRDKELLEHSHQEK 294
Score = 24.4 bits (47), Expect(2) = 9.4
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 70 SQGCRAAEMRKEL*AAMDKL 129
>gb|CO158547.1|CO158547 FLD1_7_D03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_7_D03_A029 5', mRNA sequence
Length = 693
Score = 196 bits (422), Expect = 5e-049
Identities = 72/111 (64%), Positives = 93/111 (83%)
Frame = +3 / +3
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 452
CC K ++KG W+ +ED+ L+++ITKHGHG W ++PK AGL RCGKSCRLRW NYLRPD+
Sbjct: 57 CCDKMGVKKGAWTLDEDKILVDYITKHGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPDI 236
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
KRG F+ +EED II+LH ++GNRWS IA+ LPGRTDNEIKN+WN+ +KK+L
Sbjct: 237 KRGNFSPEEEDQIIKLHELIGNRWSTIASYLPGRTDNEIKNVWNTHLKKRL 389
Score = 107 bits (228), Expect = 3e-022
Identities = 49/86 (56%), Positives = 53/86 (61%)
Frame = -3 / -3
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
F FH FLISLSVLPG AI DHLFP ++C S PLL SGLR*F+H
Sbjct: 382 FFKWVFHTFLISLSVLPGKYEAIVDHLFPMSSCNLII*SSSSGLKFPLLMSGLR*FVHRR 203
Query: 418 LQLFPHL*SPASLGTELQQPWPCFVM 341
QLFPH SPA LG+ Q PWPC VM
Sbjct: 202 RQLFPHRRSPACLGSARQLPWPCLVM 125
Score = 86.8 bits (183), Expect = 5e-016
Identities = 40/105 (38%), Positives = 57/105 (54%)
Frame = -2 / -2
Query: 584 VP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
VP +LDLI+ WQ+R N P +P + +Q ++ +F + PS +V ++V PPQ TTLS
Sbjct: 368 VPHVLDLIVGSSWQVRSNSGPSIPYELMQFNNLIFLFWTKIPSFDVGSKVVRPPQATTLS 189
Query: 404 APLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAAR 270
+P G AP AMAM VI E+ I + P + AR
Sbjct: 188 TSQEPCLLGQCAPVAMAMFGNVIDEYFIFV*SPGAFLYSHFITAR 54
Score = 41.8 bits (85), Expect = 0.016
Identities = 26/65 (40%), Positives = 34/65 (52%)
Frame = +1 / +1
Query: 268 ILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQ 447
+LA * + G +++ S IT +MAMA GA P+ G ERVV GG T
Sbjct: 52 LLAVIKWE*RKAPGL*TKIKYSSITLPNMAMATGAHCPSKQGSCDVERVVACGGRTTLDP 231
Query: 448 TSREG 462
TS+EG
Sbjct: 232 TSKEG 246
>gb|CO172303.1|CO172303 NDL1_28_G10.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_28_G10_A029 5', mRNA sequence
Length = 751
Score = 196 bits (422), Expect = 5e-049
Identities = 76/96 (79%), Positives = 83/96 (86%)
Frame = +3 / +2
Query: 363 CWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQ 542
CW VPKLAGL RCGKSCRLRW NYLRPDLKRG ++ EE LII+LHA +GNRWS+IAAQ
Sbjct: 2 CWREVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSESEEKLIIDLHAAIGNRWSRIAAQ 181
Query: 543 LPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTE 650
LPGRTDNEIKN WN+ IKKKLRQ GIDP THKPLT+
Sbjct: 182 LPGRTDNEIKNYWNTRIKKKLRQMGIDPVTHKPLTQ 289
Score = 118 bits (252), Expect = 1e-025
Identities = 54/95 (56%), Positives = 61/95 (64%)
Frame = -3 / -2
Query: 646 VSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWA 467
V GLWV GS+P SFFL+ F FLISLSVLPG+CAAI DHLFP AC
Sbjct: 285 VRGLWVTGSIPIWRSFFLILVFQ*FLISLSVLPGNCAAIRDHLFPMAACRSMMSFSSDSD 106
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQ 362
N P +SG +*F+ +LQL PHL PASLGT QQ
Sbjct: 105 NNPRFKSGRK*FVQRNLQLLPHLSRPASLGTSRQQ 1
Score = 92.7 bits (196), Expect = 8e-018
Identities = 43/98 (43%), Positives = 63/98 (64%)
Frame = -2 / -1
Query: 656 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFF 477
+ L + LVG I++ L Q LLD RVP ILDL+IS PWQLR + PP+P S+ ++DE+
Sbjct: 295 LHLGERLVGHRIDSHLAQFLLDPRVPVILDLVISSPWQLRSDS*PPIPYGSM*INDELLL 116
Query: 476 VLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPA 363
+ +L++ Q++ P Q TTL+ + S+FG APA
Sbjct: 115 *FRQ*STLQIRAQVICPTQSTTLATSKQTSKFGYFAPA 2
Score = 42.3 bits (86), Expect(2) = 3e-004
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +1 / +3
Query: 538 RSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
R+CQG LI RSRI GTR SRR+ R I PTS
Sbjct: 177 RNCQGELITRSRITGTRGSRRNCARWESIL*PTS 278
Score = 35.9 bits (72), Expect = 1.0
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY 646
E VV+N A ARE+** DQE +E QEE + + S PQA++
Sbjct: 154 E*VVTNRCAIAREN**RDQELLEHEDQEETAPDGNRSCDPQASH 285
Score = 23.1 bits (44), Expect(2) = 3e-004
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 362 LLELCSQTRWASKVRKEL*AEVDKL 436
LL +QT W++ + +EL* +DKL
Sbjct: 1 LLARSTQTCWSA*MWQEL*IALDKL 75
>gb|CX647457.1|CX647457 COLD1_16_B04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_16_B04_A029 5', mRNA sequence
Length = 748
Score = 195 bits (421), Expect = 7e-049
Identities = 76/113 (67%), Positives = 90/113 (79%)
Frame = +3 / +1
Query: 300 GLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDE 479
G W+PEED+KL+ +I +HG G W SVP AGLQRCGKSCRLRW NYLRPD+KRG F+ E
Sbjct: 1 GPWTPEEDKKLLAYIEQHGLGNWRSVPVNAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQE 180
Query: 480 EDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 638
E II+LHA+LGNRWS IA LP RTDNEIKN WN+ ++K+L + GIDP THK
Sbjct: 181 EQTIIQLHALLGNRWSTIATHLPKRTDNEIKNYWNTHLRKRLLKMGIDPVTHK 339
Score = 102 bits (218), Expect = 7e-021
Identities = 51/99 (51%), Positives = 56/99 (56%)
Frame = -3 / -3
Query: 637 LWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 458
LWV GS+P FL F F ISLSVL G A+ DHLFP+ AC N P
Sbjct: 338 LWVTGSIPIFSKRFLRCVFQ*FFISLSVLFGR*VAMVDHLFPKRACSWIMVCSSCRLNFP 159
Query: 457 LLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
LL SGLR*F+H QLFPH PA GT+LQ P PC M
Sbjct: 158 LLMSGLR*FVHRKRQLFPHRCRPALTGTDLQLPRPCCSM 42
Score = 84.5 bits (178), Expect = 2e-015
Identities = 42/111 (37%), Positives = 62/111 (55%)
Frame = -2 / -2
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 459
LVG GI++ Q L RVP IL L++ W++ + PPV ++SVQLD+ + F+ E
Sbjct: 339 LVGHGIDSHFQQALP*MRVPVILYLVVCSLWEMSSDGGPPVSQESVQLDNGLLFLQTEFS 160
Query: 458 SLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGP 306
SL+V +I+ PPQ S PL+ N +P A A+L V + L+ P
Sbjct: 159 SLDVRSEIIRPPQAAAFSTPLQTCIDWNGSPVAKAVLLDVCQQLLVFFGSP 7
>gb|DR167401.1|DR167401 RTPHOS1_18_C09.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_18_C09_A029 5', mRNA sequence
Length = 850
Score = 195 bits (420), Expect = 1e-048
Identities = 75/118 (63%), Positives = 89/118 (75%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC KQ L +G W+ EED L +I HG G W +P+ AGL RCGKSCRLRW+N
Sbjct: 33 KMGRSPCCSKQGLNRGAWTKEEDMILSTYIQIHGDGGWKILPQKAGLNRCGKSCRLRWMN 212
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 608
YLRPD+KRG + DEEDLII +H +LGNRWS IA +LPGRTDNEIKN WN+ + KKLR
Sbjct: 213 YLRPDIKRGRISADEEDLIIRMHRLLGNRWSLIAGRLPGRTDNEIKNYWNTQLSKKLR 386
Score = 74.4 bits (156), Expect = 3e-012
Identities = 41/118 (34%), Positives = 58/118 (49%)
Frame = -2 / -3
Query: 608 PQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVY 429
P+L VP ILD ++ CN PP+ + ++ ++ + V G + V QI++
Sbjct: 386 PELFAKLSVPVILDFVVCSTG*SSCNQGPPIAKKAMHPNN*ILLVGGNPSAFNVGTQIIH 207
Query: 428 PPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
P TTLSAP+K G P+ +AM V E IL GP P + L AAR HL
Sbjct: 206 PT*STTLSAPVKTCFLGKNFPSTIAMDLNVCGENHILFFGPGPTIEPLF*AARRSTHL 33
Score = 73.9 bits (155), Expect = 4e-012
Identities = 42/84 (50%), Positives = 43/84 (51%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
SF L F FLISLSVLPGS AI DH PR C S P L SG R*FI
Sbjct: 382 SFLLS*VFQ*FLISLSVLPGSRPAIRDHRLPRRRCIRIIRSSSSAEILPRLMSGRR*FIQ 203
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
+LQLFPH PA G P P
Sbjct: 202 RNLQLFPHRLRPAFWGRIFHPPSP 131
Score = 45.1 bits (92), Expect = 0.002
Identities = 27/61 (44%), Positives = 33/61 (54%)
Frame = +1 / +1
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RW +LAA ++ G GP +R+ S T +SMAM G FP GAERVV G*
Sbjct: 34 RWVDLLAAQNKGSIVGPGPKKRI*FSPHTFKSMAMVDGKFFPKKQVLTGAERVVDYVG*I 213
Query: 436 I 438
I
Sbjct: 214 I 216
Score = 38.2 bits (77), Expect = 0.21
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +2
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
DG LLL+ A+ L G ++ H+ W W +E S + VRKEL* +D+L
Sbjct: 35 DG*ISLLLKTRAQSWGLDQRRGYDSLHIHSNPWRWWMENSSPKSRS*PVRKEL*ITLDEL 214
Query: 437 S 439
S
Sbjct: 215 S 217
>gb|CF395899.1|CF395899 RTDS2_19_G06.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_19_G06_A021 5', mRNA sequence
Length = 586
Score = 194 bits (418), Expect = 2e-048
Identities = 72/117 (61%), Positives = 95/117 (81%)
Frame = +3 / +3
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
+KG W+ +ED +L+ +I HG G W +PK A L RCGKSCRLRWINYLRPDLKRG F++
Sbjct: 9 KKGAWTQQEDARLVAYIQAHGEGGWRYLPKAARLLRCGKSCRLRWINYLRPDLKRGNFSE 188
Query: 474 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
+E++LII+LH++LGN+WS IAA++ GRTDNEIKN WN+ IK+KL +G+DP TH+ L
Sbjct: 189 EEDELIIKLHSLLGNKWSLIAARMAGRTDNEIKNYWNTHIKRKLLSRGLDPQTHRSL 359
Score = 104 bits (221), Expect = 3e-021
Identities = 49/125 (39%), Positives = 71/125 (56%)
Frame = -2 / -3
Query: 662 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 483
AV+ ++ +G+GI + Q D VP IL LI+ PP RCN RP V + ++ DD++
Sbjct: 377 AVVGRTQGAMGLGIESSAQQFPFDVGVPVILYLIVRPPGHSRCNKRPFVAQKRMEFDDKL 198
Query: 482 FFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPE 303
F L E +L++W Q+VYP +P TL A + G PAA A+ V +E I L GP
Sbjct: 197 VFFLREVSALQIWTQVVYPSEPATLPASQQSCGLGEVTPAAFAVGLNVGNEAGIFLLGPG 18
Query: 302 PLSQL 288
PL ++
Sbjct: 17 PLFRM 3
Score = 93.6 bits (198), Expect = 4e-018
Identities = 49/94 (52%), Positives = 52/94 (55%)
Frame = -3 / -1
Query: 634 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPL 455
WV GS P +F LM F F ISLSV P AAI DHL PR+ S P
Sbjct: 349 WVWGSSPLLSNFLLMWVFQ*FFISLSVRPAILAAIRDHLLPRSEWSLMISSSSSSEKFPR 170
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
RSG R*FIH SLQLFPHL S A+LG Q P P
Sbjct: 169 FRSGRR*FIHRSLQLFPHLSSRAALGR*RQPPSP 68
>gb|CO162972.1|CO162972 FLD1_38_D09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_38_D09_A029 5', mRNA sequence
Length = 842
Score = 193 bits (416), Expect = 4e-048
Identities = 79/141 (56%), Positives = 99/141 (70%)
Frame = +3 / +1
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
++G W+ EED+KL+N++ HG W S+PKLAGL RCGKSCRLRW NYLRPD+KRG F+
Sbjct: 52 KRGPWTAEEDQKLINYLQHHGRTKWRSLPKLAGLSRCGKSCRLRWTNYLRPDIKRGNFSI 231
Query: 474 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEA 653
E+ +II LHA+LGNRWS IA+ LPGRTDNEIKN WN+ +K++L GIDP TH L A
Sbjct: 232 HEDIVIIHLHAILGNRWSAIASHLPGRTDNEIKNHWNTRLKRQLPVMGIDPVTHSLLPVA 411
Query: 654 DHGGAAPTISTERTSGSSDIN 716
+ ST S + N
Sbjct: 412 PTDSFMASSSTVIISRDAGCN 474
Score = 51.9 bits (107), Expect(2) = 2e-014
Identities = 27/50 (54%), Positives = 30/50 (60%)
Frame = -3 / -1
Query: 652 ASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTA 503
A+ S L V GS+P + F F ISLSVLPG C AI DHLFPR A
Sbjct: 410 ATGSKL*VTGSIPITGNCLFSLVFQ*FFISLSVLPGRCDAIADHLFPRIA 261
Score = 48.7 bits (100), Expect(2) = 2e-014
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = -3 / -1
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTE 371
P L SG R* +HLSLQLFPHL PAS G E
Sbjct: 218 PRLMSGRR*LVHLSLQLFPHLDKPASFGRE 129
>gb|CF397637.1|CF397637 RTDS3_4_A07.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_4_A07_A022 5', mRNA sequence
Length = 714
Score = 192 bits (413), Expect = 9e-048
Identities = 74/122 (60%), Positives = 91/122 (74%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
LR+G W+ EED+KL H+ +HG G W + PKLAGL RCGKSCRLRW NYLRPD+KRG F+
Sbjct: 49 LRRGPWTTEEDQKLSYHVQRHGLGNWRTFPKLAGLSRCGKSCRLRWANYLRPDIKRGTFS 228
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTE 650
E+ II LH +LGN+WS IA+ LPGRTD+EIKN WN+ + K+L GIDP TH+ L
Sbjct: 229 VHEDLNIIRLHGILGNKWSAIASHLPGRTDSEIKNHWNTKLSKRLLLMGIDPVTHRSLPT 408
Query: 651 AD 656
D
Sbjct: 409 PD 414
Score = 70.7 bits (148), Expect = 3e-011
Identities = 42/121 (34%), Positives = 62/121 (51%)
Frame = -2 / -1
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
VG I++ + +P IL L I ++R + RP + +D ++ +D + GE +
Sbjct: 393 VGYWIDSH*KKPFAQFSIPVILYLAIRSSRKMRSDSRPFISKDPMKTNDIEILMNGEGST 214
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVA 276
L V P IV P QPT + +FG RAP A AM ++ E LILLR P SQ ++
Sbjct: 213 LNVRP*IVGPSQPTAFATSG*SCKFGKRAPVAKAMALDMVAELLILLRRPGSSSQSSMIT 34
Query: 275 A 273
A
Sbjct: 33 A 31
Score = 60.2 bits (125), Expect(2) = 1e-016
Identities = 28/45 (62%), Positives = 29/45 (64%)
Frame = -3 / -2
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
S LWV GS+P S L F F ISLSVLPG C AI DHLFPR
Sbjct: 401 SDLWVTGSIPIKRSRLLSLVFQ*FFISLSVLPGRCEAIADHLFPR 267
Score = 47.8 bits (98), Expect(2) = 1e-016
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = -3 / -2
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P L SG +* HLSLQL PHL +PASLG Q P P
Sbjct: 218 PRLMSGRK*LAHLSLQLLPHLDNPASLGNVRQLPRP 111
Score = 43.2 bits (88), Expect = 0.006
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +1 / +2
Query: 268 ILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQ 447
+ A *E G RR+R+S +MA+A GA FPN + + VG* G TI G
Sbjct: 26 LAAVIMED*EEDPGRRRRIRSSATMSNAMALATGARFPNLQDYPDVAKAVG*DGPTIYGL 205
Query: 448 TSREGHSP 471
T SP
Sbjct: 206 TLSVEPSP 229
Score = 36.3 bits (73), Expect = 0.73
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -1 / -3
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFS 292
A +S SAY+ + +VWE +S GH + S* S PP +R FS
Sbjct: 202 AVNSWPISAYSFCHIWIILQVWETCASCQGHGVGHGS*ASDPPPSSRVLFS 50
>gb|DR384384.1|DR384384 RTHG1_1_H06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_1_H06_A029 5', mRNA sequence
Length = 739
Score = 192 bits (413), Expect = 9e-048
Identities = 75/117 (64%), Positives = 90/117 (76%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC KQ L +G W PEED L ++I HG G W +P+ AGLQRCGKSCRLRWIN
Sbjct: 43 KMGRAPCCSKQGLNQGPWKPEEDMILCDYIRIHGPGRWRDLPQKAGLQRCGKSCRLRWIN 222
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YLRPD+KRG + DEED+II +H +LGNRWS IA +LPGRTDNEIKN WN ++KK+
Sbjct: 223 YLRPDVKRGNISIDEEDVIIRMHRLLGNRWSLIAGRLPGRTDNEIKNHWNFHLQKKV 393
Score = 81.3 bits (171), Expect = 2e-014
Identities = 42/116 (36%), Positives = 61/116 (52%)
Frame = -2 / -2
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
LLL +P +LD ++ PP C RPP+ + ++ ++ V + G + VW +IV P
Sbjct: 390 LLLQMEIPVVLDFVVCPPR*PSCYQRPPIAKKAMHPNNNVLLIDGNITTFNVWAKIVDPT 211
Query: 422 QPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
TTLS LK G +P++ AM V+ + ILL P PL + L AAR HL
Sbjct: 210 *STTLSTALKTCFLGEISPSSRAMNSNVVAQNHILLGLPGPLIKPLF*AARSSTHL 43
Score = 74.4 bits (156), Expect = 3e-012
Identities = 41/88 (46%), Positives = 45/88 (51%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FF +F FLISLSV PG+ AI DH PR C S P L SG R* I
Sbjct: 392 TFFCRWKFQWFLISLSVRPGNRPAISDHRLPRRRCIRIITSSSSMEILPRLTSGRR*LIQ 213
Query: 424 LSLQLFPHL*SPASLGTELQQPWPCFVM 341
SLQLFP * PA G L P P +M
Sbjct: 212 RSLQLFPQR*RPAFWGRSLHLPGP*ILM 129
Score = 46.4 bits (95), Expect = 7e-004
Identities = 25/62 (40%), Positives = 35/62 (56%)
Frame = +2 / +3
Query: 254 *DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDK 433
*DG + LLL+ A GAL GG ++ H +WPW +E +S + KEL* +D+
Sbjct: 42 *DG*SSLLLKTRA*SGALEARGGYDSVRLH*NSWPWKMERSPPKSRSSALWKEL*TTLDQ 221
Query: 434 LS 439
LS
Sbjct: 222 LS 227
Score = 44.1 bits (90), Expect = 0.003
Identities = 25/64 (39%), Positives = 29/64 (45%)
Frame = -1 / -1
Query: 447 LASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKN 268
L DS S YNSF + E S GH C S+PP+ +RAP A SSK
Sbjct: 235 LGEDS*SNVVYNSFHSAEDLLFGGDLSIFQGHEF*CSRTESYPPRASRAPD*ALVLSSKE 56
Query: 267 ASPS 256
PS
Sbjct: 55 LYPS 44
Score = 41.8 bits (85), Expect = 0.016
Identities = 27/68 (39%), Positives = 34/68 (50%)
Frame = +1 / +2
Query: 247 IALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*G 426
I LRW +LAA ++ RG G RR+ T + MA+ G + P F ERVV
Sbjct: 35 IYLRWVELLAAQNKGLIRGPGSPRRI*FCATTLEFMALEDGEISPKKQVFSAVERVVDYV 214
Query: 427 G*TI*GQT 450
G TI QT
Sbjct: 215 GSTIFAQT 238
>gb|DR384689.1|DR384689 RTHG1_3_H06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_3_H06_A029 5', mRNA sequence
Length = 820
Score = 192 bits (413), Expect = 9e-048
Identities = 75/117 (64%), Positives = 90/117 (76%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC KQ L +G W PEED L ++I HG G W +P+ AGLQRCGKSCRLRWIN
Sbjct: 43 KMGRAPCCSKQGLNQGPWKPEEDMILCDYIRIHGPGRWRDLPQKAGLQRCGKSCRLRWIN 222
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YLRPD+KRG + DEED+II +H +LGNRWS IA +LPGRTDNEIKN WN ++KK+
Sbjct: 223 YLRPDVKRGNISIDEEDVIIRMHRLLGNRWSLIAGRLPGRTDNEIKNHWNFHLQKKV 393
Score = 81.3 bits (171), Expect = 2e-014
Identities = 42/116 (36%), Positives = 61/116 (52%)
Frame = -2 / -2
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
LLL +P +LD ++ PP C RPP+ + ++ ++ V + G + VW +IV P
Sbjct: 390 LLLQMEIPVVLDFVVCPPR*PSCYQRPPIAKKAMHPNNNVLLIDGNITTFNVWAKIVDPT 211
Query: 422 QPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
TTLS LK G +P++ AM V+ + ILL P PL + L AAR HL
Sbjct: 210 *STTLSTALKTCFLGEISPSSRAMNSNVVAQNHILLGLPGPLIKPLF*AARSSTHL 43
Score = 74.4 bits (156), Expect = 3e-012
Identities = 41/88 (46%), Positives = 45/88 (51%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FF +F FLISLSV PG+ AI DH PR C S P L SG R* I
Sbjct: 392 TFFCRWKFQWFLISLSVRPGNRPAISDHRLPRRRCIRIITSSSSMEILPRLTSGRR*LIQ 213
Query: 424 LSLQLFPHL*SPASLGTELQQPWPCFVM 341
SLQLFP * PA G L P P +M
Sbjct: 212 RSLQLFPQR*RPAFWGRSLHLPGP*ILM 129
Score = 46.4 bits (95), Expect = 7e-004
Identities = 25/62 (40%), Positives = 35/62 (56%)
Frame = +2 / +3
Query: 254 *DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDK 433
*DG + LLL+ A GAL GG ++ H +WPW +E +S + KEL* +D+
Sbjct: 42 *DG*SSLLLKTRA*SGALEARGGYDSVRLH*NSWPWKMERSPPKSRSSALWKEL*TTLDQ 221
Query: 434 LS 439
LS
Sbjct: 222 LS 227
Score = 44.1 bits (90), Expect = 0.003
Identities = 25/64 (39%), Positives = 29/64 (45%)
Frame = -1 / -1
Query: 447 LASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKN 268
L DS S YNSF + E S GH C S+PP+ +RAP A SSK
Sbjct: 235 LGEDS*SNVVYNSFHSAEDLLFGGDLSIFQGHEF*CSRTESYPPRASRAPD*ALVLSSKE 56
Query: 267 ASPS 256
PS
Sbjct: 55 LYPS 44
Score = 41.8 bits (85), Expect = 0.016
Identities = 27/68 (39%), Positives = 34/68 (50%)
Frame = +1 / +2
Query: 247 IALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*G 426
I LRW +LAA ++ RG G RR+ T + MA+ G + P F ERVV
Sbjct: 35 IYLRWVELLAAQNKGLIRGPGSPRRI*FCATTLEFMALEDGEISPKKQVFSAVERVVDYV 214
Query: 427 G*TI*GQT 450
G TI QT
Sbjct: 215 GSTIFAQT 238
>gb|CO163969.1|CO163969 FLD1_45_A11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_45_A11_A029 3', mRNA sequence
Length = 888
Score = 191 bits (411), Expect = 2e-047
Identities = 72/133 (54%), Positives = 99/133 (74%)
Frame = +3 / -3
Query: 264 RHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLR 443
R C K +G W+ +ED +L+ +I HG G W S+P+ AGL RCGKSCRLRWINYLR
Sbjct: 847 RRLSCEKGNTNQGAWTQQEDARLIAYIRAHGEGGWHSLPRAAGLLRCGKSCRLRWINYLR 668
Query: 444 PDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGID 623
P+LKRG F+++E+DLII+LH +LG++WS IA +LPGRT+NEIKN W++ IKK+ + +D
Sbjct: 667 PNLKRGNFSEEEDDLIIKLHNLLGDKWSLIAGRLPGRTENEIKNYWDTHIKKRKLSRELD 488
Query: 624 PNTHKPLTEADHG 662
P +H+ L D+G
Sbjct: 487 PQSHRSLWLPDNG 449
Score = 79.9 bits (168), Expect = 6e-014
Identities = 41/124 (33%), Positives = 64/124 (51%)
Frame = -2 / +2
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
+G+G+ L+ +P +L L+ PP Q + RP + ++ V+ D E+ F E +
Sbjct: 476 MGLGVEFPAQFSFLNVGIPIVLYLVFRPPRQSTRDKRPLIAQEVVEFDYEIVFFFREVST 655
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVA 276
L++ Q++YP QP TLS + G PAA A+ V E I L GP PL + L+
Sbjct: 656 LQIRTQVIYPSQPATLSTSQQTCGPGKGMPAAFAVGSNVGDESGIFLLGPRPLVCITLLT 835
Query: 275 ARMP 264
A+ P
Sbjct: 836 AQSP 847
Score = 79.0 bits (166), Expect = 1e-013
Identities = 46/103 (44%), Positives = 49/103 (47%)
Frame = -3 / +3
Query: 661 P*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXX 482
P S S W GS FLM F IS SV PG+ AI DHL P+
Sbjct: 450 PLSGSHRERWDWGSSSLLNFLFLMWVSQ*FFISFSVRPGNRPAIRDHLSPKRLWSLIMRS 629
Query: 481 XXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
S P R G R*FIH SLQLFPH PA+LG E Q P P
Sbjct: 630 SSSSEKFPRFRLGRR*FIHRSLQLFPHRSRPAALGRECQPPSP 758
>gb|DR163874.1|DR163874 RTFE1_45_A12.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_45_A12_A029 5', mRNA sequence
Length = 896
Score = 190 bits (410), Expect = 2e-047
Identities = 71/111 (63%), Positives = 92/111 (82%)
Frame = +3 / +2
Query: 312 PEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLI 491
P+ED +L+ +I HG G W +PK AGL RCGKSCRLRWINYLRPDLKRG F+++E++LI
Sbjct: 14 PQEDARLVAYIQAHGEGGWRYLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSEEEDELI 193
Query: 492 IELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
I+LH++LGN+WS IAA++ GRTDNEIKN WN+ IK+KL +G+DP TH+ L
Sbjct: 194 IKLHSLLGNKWSLIAARMAGRTDNEIKNYWNTHIKRKLLSRGLDPQTHRSL 346
Score = 97.7 bits (207), Expect = 2e-019
Identities = 46/116 (39%), Positives = 67/116 (57%)
Frame = -2 / -2
Query: 662 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 483
AV+ ++ +G+GI + Q D VP IL LI+ PP RCN RP V + ++ DD++
Sbjct: 364 AVVGRTQGAMGLGIESSAQQFPFDVGVPIILYLIVRPPGHSRCNKRPFVAQKRMEFDDKL 185
Query: 482 FFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
F L E +L++W Q+VYP +P TLSA + G PAA+A+ V +E I L
Sbjct: 184 VFFLREVSALQIWTQVVYPSEPATLSASQQSCGLGEVTPAALAVGLNVGNEAGIFL 17
Score = 95.0 bits (201), Expect = 2e-018
Identities = 49/94 (52%), Positives = 52/94 (55%)
Frame = -3 / -3
Query: 634 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPL 455
WV GS P +F LM F F ISLSV P AAI DHL PR+ S P
Sbjct: 336 WVWGSSPLLSNFLLMWVFQ*FFISLSVRPAILAAIRDHLLPRSEWSLMISSSSSSEKFPR 157
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
RSG R*FIH SLQLFPH SPA+LG Q P P
Sbjct: 156 FRSGRR*FIHRSLQLFPHRSSPAALGR*RQPPSP 55
>gb|DR694940.1|DR694940 EST1085033 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEI64 3' end, mRNA sequence
Length = 848
Score = 190 bits (410), Expect = 2e-047
Identities = 73/117 (62%), Positives = 89/117 (76%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K+ L +G W+ ED L +I HG G W ++PK AGL+RCGKSCRLRW+N
Sbjct: 91 KMGRSPCCSKEGLNRGAWTKREDMILSEYIRIHGDGGWRNMPKRAGLKRCGKSCRLRWLN 270
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YLRPD+KRG + DEE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 271 YLRPDIKRGNISPDEEELIIRLHHLLGNRWSLIAGRLPGRTDNEIKNYWNTHMSKKL 441
Score = 64.8 bits (135), Expect = 2e-009
Identities = 36/117 (30%), Positives = 52/117 (44%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL VP +LD ++ W C RP + + ++ + E + G + V +IV P
Sbjct: 441 QLLAHMSVPVVLDFVVCSTW*SSCYKRPSIAKKVMEPNYEFLLIRGNVSTFNVGAKIVQP 262
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
LS P K FG+ +P+ +AM V E IL GP P + A HL
Sbjct: 261 S*SAALSTPFKTCSFGHISPSTIAMNSNVFGENHILPFGPGPTVEPFF*ATGRSAHL 91
Score = 43.7 bits (89), Expect(2) = 3e-009
Identities = 21/36 (58%), Positives = 22/36 (61%)
Frame = -3 / -1
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P L SG R*F H +LQLFPH PA LG L P P
Sbjct: 296 PRLMSGRR*FSHRNLQLFPHRLRPALLGIFLHPPSP 189
Score = 39.1 bits (79), Expect(2) = 3e-009
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
SF L+ F FLISLSV PG+ AI DH PR
Sbjct: 440 SFLLI*VFQ*FLISLSVRPGNLPAISDHRLPR 345
Score = 36.3 bits (73), Expect = 0.73
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +2 / +3
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
DG+ LLL+ A+ L GG ++ H+ +W W +E +Q + V KEL + +L
Sbjct: 93 DGQISLLLKRRAQPWGLDQKGGYDSLRIHSNSWRWWMEKYAQKSRS*TVWKELQITMAEL 272
Query: 437 S 439
S
Sbjct: 273 S 275
Score = 33.6 bits (67), Expect = 4.9
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = +1 / +2
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RW + A + G GP R+ S T + MAM G + P G ER G*T
Sbjct: 92 RWADLPVAQKKGSTVGPGPKGRI*FSPNTFEFMAMVDGEICPKEQVLNGVERAADYDG*T 271
Query: 436 I 438
I
Sbjct: 272 I 274
>gb|DT639133.1|DT639133 EST1154064 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHN42 3' end, mRNA sequence
Length = 857
Score = 190 bits (410), Expect = 2e-047
Identities = 73/117 (62%), Positives = 89/117 (76%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K+ L +G W+ ED L +I HG G W ++PK AGL+RCGKSCRLRW+N
Sbjct: 99 KMGRSPCCSKEGLNRGAWTKREDMILSEYIRIHGDGGWRNMPKRAGLKRCGKSCRLRWLN 278
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YLRPD+KRG + DEE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 279 YLRPDIKRGNISPDEEELIIRLHHLLGNRWSLIAGRLPGRTDNEIKNYWNTHMSKKL 449
Score = 64.8 bits (135), Expect = 2e-009
Identities = 36/117 (30%), Positives = 52/117 (44%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL VP +LD ++ W C RP + + ++ + E + G + V +IV P
Sbjct: 449 QLLAHMSVPVVLDFVVCSTW*SSCYKRPSIAKKVMEPNYEFLLIRGNVSTFNVGAKIVQP 270
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
LS P K FG+ +P+ +AM V E IL GP P + A HL
Sbjct: 269 S*SAALSTPFKTCSFGHISPSTIAMNSNVFGENHILPFGPGPTVEPFF*ATGRSAHL 99
Score = 43.7 bits (89), Expect(2) = 3e-009
Identities = 21/36 (58%), Positives = 22/36 (61%)
Frame = -3 / -2
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P L SG R*F H +LQLFPH PA LG L P P
Sbjct: 304 PRLMSGRR*FSHRNLQLFPHRLRPALLGIFLHPPSP 197
Score = 39.1 bits (79), Expect(2) = 3e-009
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
SF L+ F FLISLSV PG+ AI DH PR
Sbjct: 448 SFLLI*VFQ*FLISLSVRPGNLPAISDHRLPR 353
Score = 36.3 bits (73), Expect = 0.73
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +2 / +2
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
DG+ LLL+ A+ L GG ++ H+ +W W +E +Q + V KEL + +L
Sbjct: 101 DGQISLLLKRRAQPWGLDQKGGYDSLRIHSNSWRWWMEKYAQKSRS*TVWKELQITMAEL 280
Query: 437 S 439
S
Sbjct: 281 S 283
Score = 33.6 bits (67), Expect = 4.9
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = +1 / +1
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RW + A + G GP R+ S T + MAM G + P G ER G*T
Sbjct: 100 RWADLPVAQKKGSTVGPGPKGRI*FSPNTFEFMAMVDGEICPKEQVLNGVERAADYDG*T 279
Query: 436 I 438
I
Sbjct: 280 I 282
>gb|DR110104.1|DR110104 RTS1_8_C03.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_8_C03_A029 5', mRNA sequence
Length = 538
Score = 189 bits (408), Expect = 5e-047
Identities = 73/115 (63%), Positives = 86/115 (74%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
EMGR CC K L KG WS EED L +I HG G W S+PK AGL+RCGKSCRLRW+N
Sbjct: 194 EMGRAPCCTKVGLNKGAWSAEEDSLLGKYIQTHGEGNWRSLPKKAGLRRCGKSCRLRWLN 373
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKK 599
YLRP +KRG DEE+LII +HA+LGNRWS IA ++PGRTDNE+KN WN+ + K
Sbjct: 374 YLRPCIKRGNITTDEEELIIRMHALLGNRWSIIAGRVPGRTDNEVKNYWNTNLSK 538
Score = 75.3 bits (158), Expect = 1e-012
Identities = 39/77 (50%), Positives = 43/77 (55%)
Frame = -3 / -2
Query: 583 FHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFP 404
F F SLSV PG+ AI DHL P+ AC S P L G R*F +LQLFP
Sbjct: 522 FQ*FFTSLSVRPGTLPAIIDHLLPKRACILIISSSSSVVIFPRLIHGRR*FSQRNLQLFP 343
Query: 403 HL*SPASLGTELQQPWP 353
HL SPA LG +LQ P P
Sbjct: 342 HLRSPAFLGRDLQLPSP 292
Score = 66.6 bits (139), Expect = 6e-010
Identities = 35/115 (30%), Positives = 50/115 (43%)
Frame = -2 / -1
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
L VP +L ++ C RP V ++S+ D++ FF+ L+ WP+IV P Q
Sbjct: 538 LAQVSVPVVLYFVVCSAGDSPCYYRPSVAQESMHSDNKFFFICCNISPLDTWPKIV*PTQ 359
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
LS +P G R P A M + + IL P L + AA HL
Sbjct: 358 SAALSTSSQPCFLGQRPPIAFTMSLNIFSQKTILFGRPCSLVETNFCAAWSTTHL 194
Score = 34.5 bits (69), Expect = 2.6
Identities = 19/61 (31%), Positives = 37/61 (60%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
DG +L ++ +++G++V G* + + ++ +W LE+ +Q A+K+ KEL + KL
Sbjct: 196 DGSCSMLHKSWSQQGSMVCRRG*SSGKIYSNSW*RQLEVSAQESRAAKMWKELQIALAKL 375
Query: 437 S 439
S
Sbjct: 376 S 378
>gb|CF391408.1|CF391408 RTDR3_1_E10.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_1_E10_A022 5', mRNA
sequence
Length = 818
Score = 189 bits (407), Expect = 6e-047
Identities = 74/117 (63%), Positives = 87/117 (74%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
EMGR CC KQ L +G W+ +ED L +I HG G W +P+ AGL+RCGKSCRLRWIN
Sbjct: 31 EMGRSPCCSKQGLNRGAWTQKEDTILSEYIRIHGDGKWRHLPEKAGLKRCGKSCRLRWIN 210
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YLRPD+KRG + DEEDLI+ LH +LGNRWS IA +L GRTDNEIKN WN + KKL
Sbjct: 211 YLRPDIKRGNISPDEEDLIVRLHRLLGNRWSLIAGRLAGRTDNEIKNYWNCHLCKKL 381
Score = 73.9 bits (155), Expect = 4e-012
Identities = 40/117 (34%), Positives = 58/117 (49%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL VP +LD ++ P Q CN P + + ++Q ++E+ + + S + +IVYP
Sbjct: 381 QLLAKVTVPVVLDFVVGSPSQSSCN**PSIAKKAMQPNNEILLIGRDVSSFNIGTKIVYP 202
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
LS PLK F +P A+ M V E +LL GP + L AAR HL
Sbjct: 201 T*SAALSTPLKTCFFREVSPFAITMNSNVFGENRVLLLGPGAPVEPLF*AARRSTHL 31
Score = 68.9 bits (144), Expect(2) = 3e-014
Identities = 40/84 (47%), Positives = 42/84 (50%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
SF +F FLISLSV P S AI DH PR C S P L SG R*FI
Sbjct: 380 SFLQR*QFQ*FLISLSVRPASRPAISDHRLPRRRCSRTMRSSSSGEMFPRLISGRR*FIQ 201
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
+LQLFPH PA G L P P
Sbjct: 200 RNLQLFPHRLRPAFSGRCLHLPSP 129
Score = 36.8 bits (74), Expect = 0.53
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2 / +3
Query: 254 *DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLE 370
*DG LLL+ A++G L P GG ++ H+ +W W +E
Sbjct: 30 *DG*ISLLLKTRAQQGRLDPKGGHDSLRIHSNSW*WQME 146
Score = 36.3 bits (73), Expect = 0.73
Identities = 24/62 (38%), Positives = 28/62 (45%)
Frame = +1 / +2
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG* 432
LRW +LAA ++ GP RR R S T + M MA G G ER G*
Sbjct: 29 LRWVDLLAAQNKGSTGAPGPKRRTRFSPNTFEFMVMANGDTSLKKQVLSGVERAADYVG* 208
Query: 433 TI 438
TI
Sbjct: 209 TI 214
Score = 30.9 bits (61), Expect(2) = 3e-014
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = -1 / -2
Query: 369 SSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASPSQ 253
S H H C S PP G+R P A SSK PSQ
Sbjct: 145 SICHHHEFECIRRESCPPFGSRRPC*ALVLSSKEIYPSQ 29
>gb|CF394327.1|CF394327 RTDS2_4_B08.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_4_B08_A021 5', mRNA sequence
Length = 493
Score = 189 bits (407), Expect = 6e-047
Identities = 74/117 (63%), Positives = 87/117 (74%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
EMGR CC KQ L +G W+ +ED L +I HG G W +P+ AGL+RCGKSCRLRWIN
Sbjct: 45 EMGRSPCCSKQGLNRGAWTQKEDTILSEYIRIHGDGKWRHLPEKAGLKRCGKSCRLRWIN 224
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YLRPD+KRG + DEEDLI+ LH +LGNRWS IA +L GRTDNEIKN WN + KKL
Sbjct: 225 YLRPDIKRGNISPDEEDLIVRLHRLLGNRWSLIAGRLAGRTDNEIKNYWNCHLCKKL 395
Score = 73.9 bits (155), Expect = 4e-012
Identities = 40/117 (34%), Positives = 58/117 (49%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL VP +LD ++ P Q CN P + + ++Q ++E+ + + S + +IVYP
Sbjct: 395 QLLAKVTVPVVLDFVVGSPSQSSCN**PSIAKKAMQPNNEILLIGRDVSSFNIGTKIVYP 216
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
LS PLK F +P A+ M V E +LL GP + L AAR HL
Sbjct: 215 T*SAALSTPLKTCFFREVSPFAITMNSNVFGENRVLLLGPGAPVEPLF*AARRSTHL 45
Score = 68.9 bits (144), Expect(2) = 3e-014
Identities = 40/84 (47%), Positives = 42/84 (50%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
SF +F FLISLSV P S AI DH PR C S P L SG R*FI
Sbjct: 394 SFLQR*QFQ*FLISLSVRPASRPAISDHRLPRRRCSRTMRSSSSGEMFPRLISGRR*FIQ 215
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
+LQLFPH PA G L P P
Sbjct: 214 RNLQLFPHRLRPAFSGRCLHLPSP 143
Score = 36.8 bits (74), Expect = 0.53
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2 / +2
Query: 254 *DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLE 370
*DG LLL+ A++G L P GG ++ H+ +W W +E
Sbjct: 44 *DG*ISLLLKTRAQQGRLDPKGGHDSLRIHSNSW*WQME 160
Score = 36.3 bits (73), Expect = 0.73
Identities = 24/62 (38%), Positives = 28/62 (45%)
Frame = +1 / +1
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG* 432
LRW +LAA ++ GP RR R S T + M MA G G ER G*
Sbjct: 43 LRWVDLLAAQNKGSTGAPGPKRRTRFSPNTFEFMVMANGDTSLKKQVLSGVERAADYVG* 222
Query: 433 TI 438
TI
Sbjct: 223 TI 228
Score = 30.9 bits (61), Expect(2) = 3e-014
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = -1 / -2
Query: 369 SSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASPSQ 253
S H H C S PP G+R P A SSK PSQ
Sbjct: 159 SICHHHEFECIRRESCPPFGSRRPC*ALVLSSKEIYPSQ 43
>gb|CF395727.1|CF395727 RTDS2_16_B07.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_16_B07_A021 5', mRNA sequence
Length = 782
Score = 189 bits (407), Expect = 6e-047
Identities = 74/117 (63%), Positives = 87/117 (74%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
EMGR CC KQ L +G W+ +ED L +I HG G W +P+ AGL+RCGKSCRLRWIN
Sbjct: 64 EMGRSPCCSKQGLNRGAWTQKEDTILSEYIRIHGDGKWRHLPEKAGLKRCGKSCRLRWIN 243
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YL PD+KRG + DEEDLI+ LH +LGNRWS IA +LPGRTDNEIKN WN + KKL
Sbjct: 244 YLCPDIKRGNISPDEEDLIVRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNCHLCKKL 414
Score = 73.0 bits (153), Expect = 7e-012
Identities = 40/117 (34%), Positives = 57/117 (48%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL VP +LD ++ P Q CN P + + ++Q ++E+ + S + +IVYP
Sbjct: 414 QLLAKVTVPVVLDFVVGSPRQSSCN**PSIAKKAMQPNNEILLIGRNVSSFNIGTKIVYP 235
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
LS PLK F +P A+ M V E +LL GP + L AAR HL
Sbjct: 234 T*SAALSTPLKTCFFREVSPFAITMNSNVFGENRVLLLGPGAPVEPLF*AARRSTHL 64
Score = 71.6 bits (150), Expect(2) = 6e-015
Identities = 41/84 (48%), Positives = 43/84 (51%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
SF +F FLISLSV PGS AI DH PR C S P L SG R*FI
Sbjct: 413 SFLQR*QFQ*FLISLSVRPGSRPAISDHRLPRRRCSRTMRSSSSGEMFPRLISGQR*FIQ 234
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
+LQLFPH PA G L P P
Sbjct: 233 RNLQLFPHRLRPAFSGRCLHLPSP 162
Score = 36.3 bits (73), Expect = 0.73
Identities = 24/62 (38%), Positives = 28/62 (45%)
Frame = +1 / +2
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG* 432
LRW +LAA ++ GP RR R S T + M MA G G ER G*
Sbjct: 62 LRWVDLLAAQNKGSTGAPGPKRRTRFSPNTFEFMVMANGDTSLKKQVLSGVERAADYVG* 241
Query: 433 TI 438
TI
Sbjct: 242 TI 247
Score = 35.9 bits (72), Expect = 1.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2 / +3
Query: 254 *DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLE 370
*DG LLL+ A+ G L P GG ++ H+ +W W +E
Sbjct: 63 *DG*ISLLLKTRAQPGRLDPKGGHDSLRIHSNSW*WQME 179
Score = 30.4 bits (60), Expect(2) = 6e-015
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = -1 / -2
Query: 369 SSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASPSQ 253
S H H C S PP G+R P A SSK PSQ
Sbjct: 178 SICHHHEFECIRRESCPPFGSRRPG*ALVLSSKEIYPSQ 62
>gb|CF400460.1|CF400460 RTWW1_5_H12.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_5_H12_A015 5', mRNA sequence
Length = 747
Score = 189 bits (407), Expect = 6e-047
Identities = 71/106 (66%), Positives = 90/106 (84%)
Frame = +3 / +1
Query: 327 KLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHA 506
+L+ +I +G G W S+PK AGL RCGKSCRLRWINYLRPDLKRG+F ++E++LII+LH+
Sbjct: 28 RLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHS 207
Query: 507 VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 208 VVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 345
Score = 106 bits (226), Expect = 6e-022
Identities = 47/115 (40%), Positives = 66/115 (57%)
Frame = -2 / -1
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 375 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 196
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHE 330
DDE F E +LE+ Q+VYP QPT LSA +P G PAA A+ V +E
Sbjct: 195 DDEFVFFFCEASTLEIGTQVVYPSQPTALSASRQPCSLGKGTPAAFAVGSNVSNE 31
Score = 103 bits (219), Expect = 5e-021
Identities = 52/96 (54%), Positives = 56/96 (58%)
Frame = -3 / -2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 341 GRWDWGSIPLINNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 162
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL SPA+LG E Q P P
Sbjct: 161 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSP 54
Score = 31.3 bits (62), Expect(2) = 0.11
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1 / +2
Query: 337 IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
+T + A AAG FP G + AER VG G*T
Sbjct: 38 LTFEPTAKAAGVPFPRLQGCRDAERAVGCDG*T 136
Score = 25.4 bits (49), Expect(2) = 9.3
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 236 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 334
Score = 25.4 bits (49), Expect(2) = 0.11
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 216 QQVVSYCRKIAGADGQRDKELLEHSHQEK 302
Score = 24.4 bits (47), Expect(2) = 9.3
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 78 SQGCRAAEMRKEL*AAMDKL 137
>gb|CV034623.1|CV034623 RTNACL1_10_A11.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_10_A11_A029 5', mRNA sequence
Length = 746
Score = 188 bits (406), Expect = 9e-047
Identities = 72/119 (60%), Positives = 90/119 (75%)
Frame = +3 / +1
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 452
CC K KG W+ +ED +L+ HI HG G W S+PK AGL RCGKSCR RWINYLR DL
Sbjct: 7 CCEKAHTNKGAWTQQEDTRLVAHIRAHGEGGWRSLPKAAGLLRCGKSCRQRWINYLRQDL 186
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPN 629
KR F+++E++LII LH++LGN+WS IA +L GRTDNEIKN W++ IK+KL KG DP+
Sbjct: 187 KRCNFSEEEDELIIRLHSLLGNKWSLIAGRLTGRTDNEIKNHWSTHIKRKLSSKGFDPH 363
Score = 100 bits (213), Expect = 4e-020
Identities = 37/67 (55%), Positives = 54/67 (80%)
Frame = +3 / +1
Query: 444 PDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGID 623
P LKRG F+++E++LII LH++LGN+WS IA +LPGR+ NEIKN W+ +K+KL ++G+
Sbjct: 358 PHLKRGNFSEEEDELIIRLHSLLGNKWSLIAGRLPGRSGNEIKNHWSIHMKRKLSRRGLH 537
Query: 624 PNTHKPL 644
P TH+ L
Sbjct: 538 PQTHRSL 558
Score = 77.1 bits (162), Expect = 4e-013
Identities = 43/91 (47%), Positives = 48/91 (52%)
Frame = -3 / -1
Query: 625 GSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRS 446
GS P +F LM F ISLSVLP + AI DHLFPR+ S RS
Sbjct: 359 GSNPLLDNFLLMCVLQWFFISLSVLPVNLPAIRDHLFPRSEWSLMISSSSSSEKLQRFRS 180
Query: 445 GLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
R*FIH LQLFP +PA+LG E Q P P
Sbjct: 179 *RR*FIHRCLQLFPQRSNPAALGRERQPPSP 87
Score = 65.2 bits (136), Expect = 1e-009
Identities = 38/118 (32%), Positives = 55/118 (46%)
Frame = -2 / -3
Query: 623 INAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVW 444
I F Q LD P +L L++ PP Q N RP V ++ ++ DD + F + +L++
Sbjct: 357 IEPFTRQFSLDVCTPVVLYLVVCPPRQSPRNKRPLVSQERMESDD*LIFFF*KVTTLQIL 178
Query: 443 PQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAAR 270
Q+VYP P TL + PAA M V + I L GP + L+ AR
Sbjct: 177 TQVVYPSLPATLPTAQQSCCLRKGTPAAFPMGSNVGDKAGIFLLGPGAFVSVSLLTAR 4
Score = 38.6 bits (78), Expect = 0.15
Identities = 23/63 (36%), Positives = 26/63 (41%)
Frame = -3 / -1
Query: 631 VLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLL 452
V G P +F M F ISL PG+ AI DHLFPR+ S P
Sbjct: 545 VCGWSPLRDNFLFMCMLQWFFISLPDRPGNLPAIRDHLFPRSEWSLMISSSSSSEKLPRF 366
Query: 451 RSG 443
R G
Sbjct: 365 RCG 357
>gb|CF397272.1|CF397272 RTDS3_2_C01.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_2_C01_A022 5', mRNA sequence
Length = 598
Score = 188 bits (405), Expect = 1e-046
Identities = 74/117 (63%), Positives = 86/117 (73%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
EMGR CC KQ L +G W+ +ED L +I HG G W +P AGL+RCGKSCRLRWIN
Sbjct: 30 EMGRSPCCSKQGLNRGAWTQKEDTILSEYIRIHGDGKWRHLPAKAGLKRCGKSCRLRWIN 209
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YL PD+KRG + DEEDLI+ LH +LGNRWS IA +LPGRTDNEIKN WN + KKL
Sbjct: 210 YLCPDIKRGNISPDEEDLIVRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNCHLCKKL 380
Score = 72.1 bits (151), Expect(2) = 5e-015
Identities = 41/84 (48%), Positives = 43/84 (51%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
SF +F FLISLSV PGS AI DH PR C S P L SG R*FI
Sbjct: 379 SFLQR*QFQ*FLISLSVRPGSRPAISDHRLPRRRCSRTMRSSSSGEMFPRLISGQR*FIQ 200
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
+LQLFPH PA G L P P
Sbjct: 199 RNLQLFPHRLRPAFAGRCLHLPSP 128
Score = 69.3 bits (145), Expect = 9e-011
Identities = 39/117 (33%), Positives = 56/117 (47%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL VP +LD ++ P Q CN P + + ++Q ++E+ + S + +IVYP
Sbjct: 380 QLLAKVTVPVVLDFVVGSPRQSSCN**PSIAKKAMQPNNEILLIGRNVSSFNIGTKIVYP 201
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
LS PLK +P A+ M V E +LL GP + L AAR HL
Sbjct: 200 T*SAALSTPLKTCFCREVSPFAITMNSNVFGENRVLLLGPGAPVEPLF*AARRSTHL 30
Score = 36.3 bits (73), Expect = 0.73
Identities = 24/62 (38%), Positives = 28/62 (45%)
Frame = +1 / +1
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG* 432
LRW +LAA ++ GP RR R S T + M MA G G ER G*
Sbjct: 28 LRWVDLLAAQNKGSTGAPGPKRRTRFSPNTFEFMVMANGDTSLQKQVLSGVERAADYVG* 207
Query: 433 TI 438
TI
Sbjct: 208 TI 213
Score = 35.9 bits (72), Expect = 1.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2 / +2
Query: 254 *DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLE 370
*DG LLL+ A+ G L P GG ++ H+ +W W +E
Sbjct: 29 *DG*ISLLLKTRAQPGRLDPKGGHDSLRIHSNSW*WQME 145
Score = 30.4 bits (60), Expect(2) = 5e-015
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = -1 / -2
Query: 369 SSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASPSQ 253
S H H C S PP G+R P A SSK PSQ
Sbjct: 144 SICHHHEFECIRRESCPPFGSRRPG*ALVLSSKEIYPSQ 28
>gb|CF668816.1|CF668816 RTCNT1_38_G11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_38_G11_A029 5', mRNA sequence
Length = 814
Score = 188 bits (405), Expect = 1e-046
Identities = 73/131 (55%), Positives = 92/131 (70%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K+ L +G W+ ED L ++ HG G W ++P+ AGL+RCGKSCRLRW+N
Sbjct: 2 KMGRSPCCSKEGLNRGAWTKREDMILSEYVRIHGDGGWRNLPEKAGLKRCGKSCRLRWLN 181
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
YLRPD+KRG EE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL +
Sbjct: 182 YLRPDIKRGNICPAEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKLSSQ 361
Query: 615 GIDPNTHKPLT 647
T K L+
Sbjct: 362 ESQDKTSKNLS 394
Score = 74.4 bits (156), Expect = 3e-012
Identities = 42/84 (50%), Positives = 43/84 (51%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
SF L F FLISLSV PGS AI DH PR C + P L SG R*F
Sbjct: 351 SFLLR*VFQ*FLISLSVRPGSRPAISDHRLPRRRCSRIISSSSAGQMFPRLISGRR*FNQ 172
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
SLQLFPHL PA G L P P
Sbjct: 171 RSLQLFPHLLRPAFSGRFLHPPSP 100
Score = 61.6 bits (128), Expect = 2e-008
Identities = 37/117 (31%), Positives = 55/117 (47%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL VP +LD ++ Q C PP+ + ++Q ++++ + + +IV P
Sbjct: 352 QLLAQMSVPVVLDFVVCSTRQSSCYQ*PPIAKKAMQPNNKLLLGGANVSAFNIGTKIVQP 173
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
TLS LK F +P+ +AM V E IL GP P + L AAR HL
Sbjct: 172 A*SATLSTSLKTCFFRKISPSTIAMNSNVFGENHILPFGPGPAVEPLFGAARRSTHL 2
Score = 39.1 bits (79), Expect = 0.11
Identities = 24/61 (39%), Positives = 29/61 (47%)
Frame = +1 / +3
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RW +LAA R G GP R+ S T + MAM G +F + ERV G*T
Sbjct: 3 RWVDLLAAPKRGSTAGPGPKGRI*FSPNTFEFMAMVDGEIFRKKQVLRDVERVADYAG*T 182
Query: 436 I 438
I
Sbjct: 183 I 185
>gb|DR117421.1|DR117421 RTMG1_6_G12.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_6_G12_A029 5', mRNA sequence
Length = 872
Score = 188 bits (405), Expect = 1e-046
Identities = 71/103 (68%), Positives = 87/103 (84%)
Frame = +3 / +1
Query: 354 GHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQI 533
G G W S+PK AGL RCGKSCRLRWINYLRPDLKRG F+++E++LII+LH++LGN+WS I
Sbjct: 1 GEGGWRSLPKAAGLMRCGKSCRLRWINYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLI 180
Query: 534 AAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHG 662
A +LPGRTDNEIKN WN+ IK+KL KG+DP TH+PL E +G
Sbjct: 181 AGRLPGRTDNEIKNYWNTHIKRKLLSKGLDPQTHRPLGEPYNG 309
Score = 91.8 bits (194), Expect = 1e-017
Identities = 48/97 (49%), Positives = 54/97 (55%)
Frame = -3 / -1
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSW 470
S SG V GS P +F + F F ISLSV PG+ AI DHL PR S
Sbjct: 296 SPSGRCVWGSSPLLSNFLFI*VFQ*FFISLSVRPGNLPAIRDHLLPRREWSLMMSSSSSS 117
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQP 359
P RSG +*FIH SLQLFPH SPA+LG+E Q P
Sbjct: 116 EKFPRFRSGRK*FIHRSLQLFPHRISPAALGSERQPP 6
Score = 85.4 bits (180), Expect = 1e-015
Identities = 40/103 (38%), Positives = 56/103 (54%)
Frame = -2 / -3
Query: 662 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 483
A++ L+ V +GI + Q L VP +L L++ P Q CN RP V E V+ DDE+
Sbjct: 309 AIVGLA*RTVRLGIESLA*QFSLYMSVPVVLYLVVRAPGQSPCNKRPLVAEKGVEFDDEL 130
Query: 482 FFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMA 354
F E +L++ Q+VYP +P L A +P G R PAA A
Sbjct: 129 VFFFREVSTLQIGTQVVYPSEPAALPASHQPCGLGKRTPAAFA 1
>gb|DR058733.1|DR058733 RTNIT1_13_C07.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_13_C07_A029 5', mRNA sequence
Length = 592
Score = 188 bits (404), Expect = 2e-046
Identities = 73/116 (62%), Positives = 87/116 (75%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K+ L +G W+ ED L +I HG G W S+PK AGL+RCGKSCRLRW+NY
Sbjct: 32 MGRSPCCAKEGLNRGAWTKTEDIILSEYIRIHGDGGWRSLPKKAGLKRCGKSCRLRWLNY 211
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
LRPD+KRG + EE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 212 LRPDIKRGDISPAEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTRLSKKL 379
Score = 79.4 bits (167), Expect = 8e-014
Identities = 42/84 (50%), Positives = 45/84 (53%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
SF L F FLISLSV PGS AI DH PR C + +P L SG R*F
Sbjct: 378 SFLLRRVFQ*FLISLSVRPGSRPAISDHRLPRRRCSRIISSSSAGEMSPRLMSGRR*FNQ 199
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
+LQLFPH SPA LG L P P
Sbjct: 198 RNLQLFPHRLSPAFLGRLLHPPSP 127
Score = 76.2 bits (160), Expect = 7e-013
Identities = 42/116 (36%), Positives = 57/116 (49%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QL VP +LD ++ P Q C PP+ + +VQ ++++ G + V +IV P
Sbjct: 379 QLFA*TSVPVVLDFVVCSPGQPSCYQ*PPITKKAVQPNNQLLLSRGNVSAFNVGTKIV*P 200
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
TTLS PLKP FG +P +AM V E IL P P + L AAR H
Sbjct: 199 T*STTLSTPLKPCFFGETSPPTIAMNSNVFGENNILRFRPGPAVEPFLCAARRSTH 32
Score = 45.1 bits (92), Expect = 0.002
Identities = 26/61 (42%), Positives = 31/61 (50%)
Frame = +1 / +3
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RW +LAA + G G RR+ S T + MAM G + P G G ERVV G*T
Sbjct: 30 RWVDLLAAQRKGSTAGPGRKRRILFSPNTFEFMAMVGGEVSPKKQGLSGVERVVDYVG*T 209
Query: 436 I 438
I
Sbjct: 210 I 212
Score = 36.8 bits (74), Expect = 0.53
Identities = 22/61 (36%), Positives = 26/61 (42%)
Frame = -1 / -3
Query: 438 DSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASP 259
DSL+ YNSF T A W S+ H H C +PP +R A SK P
Sbjct: 212 DSLTNVIYNSFHTA*ALLFWGDFSTHHRHEFECIRRE*YPPFSSRPRG*ALPLRSKEIYP 33
Query: 258 S 256
S
Sbjct: 32 S 30
Score = 33.6 bits (67), Expect = 4.9
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
DG LL + A+ L GG + H+ +W W +E Q A V KEL* + KL
Sbjct: 31 DG*ISLLRKGRAQPRGLDENGGYYSLRIHSNSWRWWVEKSPQKSRA*AVWKEL*ITLVKL 210
Query: 437 S 439
S
Sbjct: 211 S 213
>gb|AW065119.1|AW065119 ST39H05 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST39H05, mRNA sequence
Length = 586
Score = 187 bits (403), Expect = 2e-046
Identities = 73/116 (62%), Positives = 87/116 (75%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K+ L +G W+ ED L +I HG G W S+PK AGL+RCGKSCRLRW+NY
Sbjct: 75 MGRSPCCAKEGLNRGAWTKTEDIILSEYIRIHGDGGWRSLPKKAGLKRCGKSCRLRWLNY 254
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
LRPD+KRG + EE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 255 LRPDIKRGDVSPAEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTRLSKKL 422
Score = 80.3 bits (169), Expect = 4e-014
Identities = 42/84 (50%), Positives = 45/84 (53%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
SF L F FLISLSV PGS AI DH PR C + +P L SG R*F
Sbjct: 421 SFLLRRVFQ*FLISLSVRPGSRPAISDHRLPRRRCSRIISSSSAGETSPRLMSGRR*FNQ 242
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
+LQLFPH SPA LG L P P
Sbjct: 241 RNLQLFPHRLSPAFLGRLLHPPSP 170
Score = 76.2 bits (160), Expect = 7e-013
Identities = 42/116 (36%), Positives = 57/116 (49%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QL VP +LD ++ P Q C PP+ + +VQ ++++ G + V +IV P
Sbjct: 422 QLFA*TSVPVVLDFVVCSPGQPSCYQ*PPITKKAVQPNNQLLLSRGNVSAFNVGTKIV*P 243
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
TTLS PLKP FG +P +AM V E IL P P + L AAR H
Sbjct: 242 T*STTLSTPLKPCFFGETSPPTIAMNSNVFGENNILRFRPGPAVEPFLCAARRSTH 75
Score = 45.1 bits (92), Expect = 0.002
Identities = 26/61 (42%), Positives = 31/61 (50%)
Frame = +1 / +1
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RW +LAA + G G RR+ S T + MAM G + P G G ERVV G*T
Sbjct: 73 RWVDLLAAQRKGSTAGPGRKRRILFSPNTFEFMAMVGGEVSPKKQGLSGVERVVDYVG*T 252
Query: 436 I 438
I
Sbjct: 253 I 255
Score = 36.8 bits (74), Expect = 0.53
Identities = 22/61 (36%), Positives = 26/61 (42%)
Frame = -1 / -2
Query: 438 DSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASP 259
DSL+ YNSF T A W S+ H H C +PP +R A SK P
Sbjct: 255 DSLTNVIYNSFHTA*ALLFWGDFSTHHRHEFECIRRE*YPPFSSRPRG*ALPLRSKEIYP 76
Query: 258 S 256
S
Sbjct: 75 S 73
Score = 33.6 bits (67), Expect = 4.9
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +2 / +2
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
DG LL + A+ L GG + H+ +W W +E Q A V KEL* + KL
Sbjct: 74 DG*ISLLRKGRAQPRGLDENGGYYSLRIHSNSWRWWVEKSPQKSRA*AVWKEL*ITLVKL 253
Query: 437 S 439
S
Sbjct: 254 S 256
>gb|DR052727.1|DR052727 RTCA1_6_B03.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_6_B03_A029 5', mRNA sequence
Length = 801
Score = 186 bits (401), Expect = 4e-046
Identities = 71/112 (63%), Positives = 90/112 (80%)
Frame = +3 / +2
Query: 327 KLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHA 506
+L+ HI HG G W S+PK AGL RCGKSC+LRWINYLRPDLKRG F+++E++LII+L +
Sbjct: 2 RLIAHIRAHGEGGWRSLPKAAGLMRCGKSCKLRWINYLRPDLKRGNFSEEEDELIIKLRS 181
Query: 507 VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHG 662
+LGN+WS IA +L RTDNEIKN WN+ IK+KL KG+DP TH+PL E +G
Sbjct: 182 LLGNKWSLIAGRLSWRTDNEIKNYWNTHIKRKLLSKGLDPQTHRPLGEPYNG 337
Score = 86.3 bits (182), Expect = 7e-016
Identities = 47/99 (47%), Positives = 53/99 (53%)
Frame = -3 / -1
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSW 470
S SG V GS P +F + F F ISLSV + AI DHL PR S
Sbjct: 324 SPSGRCVWGSSPLLSNFLFI*VFQ*FFISLSVRQDNLPAIRDHLLPRRERSLMMSSSSSS 145
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG +*FIH SLQLFPH SPA+LG+E Q P P
Sbjct: 144 EKFPRFRSGRK*FIHRSLQLFPHRISPAALGSERQPPSP 28
Score = 83.1 bits (175), Expect = 6e-015
Identities = 39/104 (37%), Positives = 56/104 (53%)
Frame = -2 / -3
Query: 662 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 483
A++ L+ V +GI + Q L VP +L L++ P Q CN RP V E + DDE+
Sbjct: 337 AIVGLA*RTVRLGIESLA*QFSLYMSVPVVLYLVVRAPGQSPCNKRPLVAEKGAEFDDEL 158
Query: 482 FFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAM 351
F E +L++ Q+VYPP+ L A +P G R PAA A+
Sbjct: 157 VFFFREVSTLQIGTQVVYPPELAALPASHQPCGLGKRTPAAFAV 26
>gb|DR020720.1|DR020720 STRS1_38_G12.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_38_G12_A034 5', mRNA sequence
Length = 688
Score = 186 bits (400), Expect = 6e-046
Identities = 70/115 (60%), Positives = 87/115 (75%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC KQ L +G W+ +ED L +I HG+G W ++P+ AGL+RCGKSCRLRW NY
Sbjct: 18 MGRSPCCSKQGLNRGTWTEKEDMILSEYIRLHGNGGWRNLPQKAGLKRCGKSCRLRWTNY 197
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
LRPD+KRG + DEEDLI+ + +LGNRWS IA +LPGRTDNEIKN WN+ + KK
Sbjct: 198 LRPDIKRGNISPDEEDLIVRMRRLLGNRWSLIAGRLPGRTDNEIKNYWNTRLSKK 362
Score = 79.0 bits (166), Expect = 1e-013
Identities = 42/116 (36%), Positives = 60/116 (51%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
+LL RVP +LDL+I PP Q C RPP+ + + ++EV + G ++ +IV P
Sbjct: 365 RLLAQTRVPVVLDLVICPPRQSSCYQRPPIAKKATHPNNEVLLIGGNVSPFDIGTKIVRP 186
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
TTLS P K +P+ ++M V+ E ILL GP + L AAR H
Sbjct: 185 T*STTLSTPFKTCFLREISPSTISMESNVLGENHILLFGPGSSVEPLFRAAR*STH 18
Score = 39.6 bits (80), Expect(2) = 6e-008
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = -3 / -1
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P L SG R*F+ +LQLFPH PA G L P+P
Sbjct: 220 PRLISGRR*FVQRNLQLFPHRLRPAF*GRFLHPPFP 113
Score = 38.6 bits (78), Expect(2) = 6e-008
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = -3 / -1
Query: 601 FFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
F L F FLISLSV PGS AI DH PR
Sbjct: 361 FLLRRVFQ*FLISLSVRPGSRPAISDHRLPR 269
Score = 35.4 bits (71), Expect(2) = 0.002
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +2 / +2
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
DG LLL+ A+ L GG ++ H+ W W +E + V KEL* +D+L
Sbjct: 17 DG*ITLLLETRAQPRNLDRKGGYDSLRVHSTPWKWWMEKSPSESRS*TVWKEL*ITLDEL 196
Query: 437 S 439
S
Sbjct: 197 S 199
Score = 27.6 bits (54), Expect(2) = 0.002
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS 603
Q C GG I RSR GTR RS
Sbjct: 295 QDDCLGGQITRSRTTGTRV*ARS 363
>gb|CF399612.1|CF399612 RTDS3_26_H01.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_26_H01_A022 5', mRNA sequence
Length = 387
Score = 185 bits (399), Expect = 8e-046
Identities = 72/116 (62%), Positives = 85/116 (73%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
EMGR CC KQ L +G W+ +ED L +I HG G W +P AGL+RCGKSCRLRWIN
Sbjct: 38 EMGRSPCCSKQGLNRGAWTQKEDTILSEYIRIHGDGKWRHLPAKAGLKRCGKSCRLRWIN 217
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
YL PD+KRG + DEEDLI+ LH +LGNRWS IA +LPGRTDNE+KN WN + KK
Sbjct: 218 YLCPDIKRGNISPDEEDLIVRLHRLLGNRWSLIAGRLPGRTDNELKNYWNCHLCKK 385
Score = 69.3 bits (145), Expect(2) = 3e-014
Identities = 40/84 (47%), Positives = 42/84 (50%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
SF +F FL SLSV PGS AI DH PR C S P L SG R*FI
Sbjct: 387 SFLQR*QFQ*FLSSLSVRPGSRPAISDHRLPRRRCSRTMRSSSSGEMFPRLISGQR*FIQ 208
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
+LQLFPH PA G L P P
Sbjct: 207 RNLQLFPHRLRPAFAGRCLHLPSP 136
Score = 65.2 bits (136), Expect = 1e-009
Identities = 37/116 (31%), Positives = 55/116 (47%)
Frame = -2 / -3
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
LL VP +L+ ++ P Q CN P + + ++Q ++E+ + S + +IVYP
Sbjct: 385 LLAKVTVPVVLEFVVGSPRQSSCN**PSIAKKAMQPNNEILLIGRNVSSFNIGTKIVYPT 206
Query: 422 QPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
LS PLK +P A+ M V E +LL GP + L AAR HL
Sbjct: 205 *SAALSTPLKTCFCREVSPFAITMNSNVFGENRVLLLGPGAPVEPLF*AARRSTHL 38
Score = 36.3 bits (73), Expect = 0.73
Identities = 24/62 (38%), Positives = 28/62 (45%)
Frame = +1 / +3
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG* 432
LRW +LAA ++ GP RR R S T + M MA G G ER G*
Sbjct: 36 LRWVDLLAAQNKGSTGAPGPKRRTRFSPNTFEFMVMANGDTSLQKQVLSGVERAADYVG* 215
Query: 433 TI 438
TI
Sbjct: 216 TI 221
Score = 35.9 bits (72), Expect = 1.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2 / +1
Query: 254 *DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLE 370
*DG LLL+ A+ G L P GG ++ H+ +W W +E
Sbjct: 37 *DG*ISLLLKTRAQPGRLDPKGGHDSLRIHSNSW*WQME 153
Score = 30.4 bits (60), Expect(2) = 3e-014
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = -1 / -2
Query: 369 SSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASPSQ 253
S H H C S PP G+R P A SSK PSQ
Sbjct: 152 SICHHHEFECIRRESCPPFGSRRPG*ALVLSSKEIYPSQ 36
>gb|DR098778.1|DR098778 STRR1_47_G01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_47_G01_A033 5', mRNA sequence
Length = 676
Score = 185 bits (398), Expect = 1e-045
Identities = 72/116 (62%), Positives = 86/116 (74%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K+ L +G W+ ED L +I HG G W +PK AGL+RCGKSCRLRW+NY
Sbjct: 2 MGRSPCCAKEGLNRGAWTKTEDIILSEYIRIHGDGGWRILPKKAGLKRCGKSCRLRWLNY 181
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
LRPD+KRG + EE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 182 LRPDIKRGDISPAEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTRLSKKL 349
Score = 79.4 bits (167), Expect = 8e-014
Identities = 42/84 (50%), Positives = 45/84 (53%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
SF L F FLISLSV PGS AI DH PR C + +P L SG R*F
Sbjct: 348 SFLLRRVFQ*FLISLSVRPGSRPAISDHRLPRRRCSRIISSSSAGEMSPRLMSGRR*FNQ 169
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
+LQLFPH SPA LG L P P
Sbjct: 168 RNLQLFPHRLSPAFLGRILHPPSP 97
Score = 76.7 bits (161), Expect = 5e-013
Identities = 42/116 (36%), Positives = 57/116 (49%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QL VP +LD ++ P Q C PP+ + +VQ ++++ G + V +IV P
Sbjct: 349 QLFA*TSVPVVLDFVVCSPGQPSCYQ*PPITKKAVQPNNQLLLSRGNVSAFNVGTKIV*P 170
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
TTLS PLKP FG +P +AM V E IL P P + L AAR H
Sbjct: 169 T*STTLSTPLKPCFFGENSPPTIAMNSNVFGENNILRFRPGPAVEPFLCAARRSTH 2
Score = 42.3 bits (86), Expect = 0.012
Identities = 25/60 (41%), Positives = 29/60 (48%)
Frame = +1 / +3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
W +LAA + G G RR+ S T + MAM G P G G ERVV G*TI
Sbjct: 3 WVDLLAAQRKGSTAGPGRKRRILFSPNTFEFMAMVGGEFSPKKQGLSGVERVVDYVG*TI 182
Score = 35.9 bits (72), Expect = 1.0
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -1 / -3
Query: 438 DSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASP 259
DSL+ YNSF T A W + S+ H H C +PP +R A SK P
Sbjct: 182 DSLTNVIYNSFHTA*ALLFWGEFSTHHRHEFECIRRE*YPPFSSRPRG*ALPLRSKEIYP 3
Score = 33.1 bits (66), Expect = 6.8
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
DG LL + A+ L GG + H+ +W W +E Q A V KEL* + KL
Sbjct: 1 DG*ISLLRKGRAQPRGLDENGGYYSLRIHSNSWRWWVENSPQKSRA*AVWKEL*ITLVKL 180
Query: 437 S 439
S
Sbjct: 181 S 183
>gb|CF396247.1|CF396247 RTDS2_15_B11.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_15_B11_A021 5', mRNA sequence
Length = 821
Score = 121 bits (259), Expect(2) = 1e-045
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +3 / +1
Query: 351 HGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGN 518
HG GCW S+PK AGL RCGKSCRLRWINYLRPDLKRG F++DE+DLI++LHA+LGN
Sbjct: 4 HGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGFFSEDEDDLILKLHALLGN 171
Score = 83.5 bits (176), Expect(2) = 1e-045
Identities = 32/53 (60%), Positives = 38/53 (71%)
Frame = +3 / +1
Query: 516 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAP 674
NRWS IA +LPGRTDNEIKN WNS +K+KL GIDP TH+P + H +P
Sbjct: 172 NRWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGIDPLTHRPFQKTSHHHPSP 330
Score = 68.9 bits (144), Expect(2) = 1e-019
Identities = 33/56 (58%), Positives = 34/56 (60%)
Frame = -3 / -1
Query: 520 LFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
LFPR AC S P LRSG R*FIHLSLQL PH PA+LG E QQP P
Sbjct: 173 LFPRRACSLRIRSSSSSEKNPRLRSGRR*FIHLSLQLLPHRSRPAALGRERQQPSP 6
Score = 60.6 bits (126), Expect(2) = 1e-013
Identities = 22/58 (37%), Positives = 36/58 (62%)
Frame = -2 / -3
Query: 524 PPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAM 351
P + ++ VQ ++++ FV GE PS E+ +I+YP Q T + P + G RAPA ++M
Sbjct: 177 PVISKEGVQFENKIIFVFGEKPSFEIRAKIIYPSQSATFATPKQTCGLGERAPATLSM 4
Score = 49.2 bits (101), Expect(2) = 1e-019
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
G WV GS+P +SF EF F ISLSV PG AI DHL
Sbjct: 296 GRWVRGSIPMLISFRFRCEFQ*FFISLSVRPGKRPAIKDHL 174
Score = 36.8 bits (74), Expect(2) = 1e-013
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -2 / -3
Query: 659 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPV 516
V SL K +G G+ + + L RVP +L L+I WQ RPPV
Sbjct: 315 VRSLLKRTMG*GVYSHADKFSLQMRVPVVLYLVICSSWQTASYQRPPV 172
>gb|DR015810.1|DR015810 STRS1_5_F07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_F07_A034 5', mRNA sequence
Length = 829
Score = 150 bits (323), Expect(2) = 5e-045
Identities = 56/93 (60%), Positives = 75/93 (80%)
Frame = +3 / +3
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAA 539
G W ++P+ AGL+RCGKSCRLRW+NYLRPD++ G F++DE+++I L+A +G+RWS IAA
Sbjct: 108 GNWIALPQKAGLKRCGKSCRLRWLNYLRPDIRHGGFSEDEDNIICSLYASIGSRWSIIAA 287
Query: 540 QLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 638
QLPGRTDN+IKN WN+ +KKKL K D T +
Sbjct: 288 QLPGRTDNDIKNYWNTRLKKKLLGKRKDQQTRR 386
Score = 82.2 bits (173), Expect = 1e-014
Identities = 44/88 (50%), Positives = 50/88 (56%)
Frame = -3 / -1
Query: 622 SMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSG 443
S+ F +FF F F +SLSVLPG+ AAI DHL P A S P L SG
Sbjct: 370 SLRFPSNFFFSLVFQ*FFMSLSVLPGNWAAIIDHLLPMLA*RLQMMLSSSSEKPPCLISG 191
Query: 442 LR*FIHLSLQLFPHL*SPASLGTELQQP 359
L+*F HLSLQLFPHL PA G +Q P
Sbjct: 190 LK*FNHLSLQLFPHLFRPAFCGRAIQLP 107
Score = 63.4 bits (132), Expect = 5e-009
Identities = 31/94 (32%), Positives = 44/94 (46%)
Frame = -2 / -3
Query: 623 INAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVW 444
I F QL L VP I +I+ L CN RPP ++ ++V F+ E +W
Sbjct: 371 IFTFPKQLFLQPCVPVIFYVIVCSSR*LGCNYRPPASNACIEATNDVIFIF*ETTMPYIW 192
Query: 443 PQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCY 342
PQIV P +P LS P + S P A + + +
Sbjct: 191 PQIVQPSKPAALSTPFQTSFLWKSNPIATSAMLF 90
Score = 52.4 bits (108), Expect(2) = 5e-045
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG 362
MGR CC K ++KG WSPEED KL I +HG G
Sbjct: 3 MGRAPCCDKANVKKGSWSPEEDAKLKAFIEQHGTG 107
Score = 32.2 bits (64), Expect(2) = 0.032
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +1 / +1
Query: 358 MAAGALFPNSLGFKGAERVVG*GG*TI*GQ 447
+A G LF L KG ER G G*TI*GQ
Sbjct: 106 VAIGLLFHRKLV*KGVERAAGLDG*TI*GQ 195
Score = 26.3 bits (51), Expect(2) = 0.032
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2 / +2
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQT 385
DG++ LL Q + +K LV +T + AW W CS T
Sbjct: 2 DGKSTLL*QGKCQKRILVTRRRRKTQGVY*TAWHWWQLDCSST 130
>gb|CO176256.1|CO176256 NDL1_60_G12.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_60_G12_A029 5', mRNA sequence
Length = 769
Score = 182 bits (392), Expect = 7e-045
Identities = 71/116 (61%), Positives = 88/116 (75%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR C + L++G WS +ED L+ +I HGHG W +P+ AGL+R GKSCRLRW+NY
Sbjct: 45 MGRSPCLSNEGLKRGTWSVQEDMILLQYIRIHGHGEWGRLPEKAGLKRSGKSCRLRWMNY 224
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
LRP++KRG + DEE+LII LH +LGNRWS IA +LPGRTDNEIKN WNS + KKL
Sbjct: 225 LRPNIKRGDISPDEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKL 392
Score = 72.1 bits (151), Expect = 1e-011
Identities = 36/119 (30%), Positives = 60/119 (50%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL RVP +LD ++ + N RPP+ + ++Q ++E+ + G + + +I++P
Sbjct: 392 QLLAKVRVPVVLDFVVRSSRESSSNQRPPIAKKAMQPNNELLLIGGNVSAFNIGTKIIHP 213
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNA 249
T L PLK FG +P M M V+ + ILL P P + + AR H+ +
Sbjct: 212 T*STALPTPLKTCFFG*SSPFPMPMNSNVLQQNHILLDAPGPPLEPFI*QARRSTHVRS 36
Score = 66.1 bits (138), Expect(2) = 4e-011
Identities = 39/84 (46%), Positives = 42/84 (50%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
SF EF FLISLSV PGS AI DH PR C S +P L G R*FI
Sbjct: 391 SFLQR*EFQ*FLISLSVRPGSRPAISDHRLPRRRCSRIMSSSSSGEMSPRLILGRR*FIQ 212
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
+LQLFP PA G+ P P
Sbjct: 211 RNLQLFPLRLRPAFSGSLPHSPCP 140
Score = 23.1 bits (44), Expect(2) = 4e-011
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -1 / -2
Query: 360 HGHALLCDS*VSHPPQGTRAPFSASACSSKNASP 259
H H C + S+PP +R+P A +S P
Sbjct: 147 HAHEFECIATESYPPGRSRSPA*ALHLTSTEIYP 46
>gb|CF667292.1|CF667292 RTCNT1_29_G02.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_29_G02_A029 3', mRNA sequence
Length = 681
Score = 182 bits (391), Expect = 1e-044
Identities = 70/127 (55%), Positives = 90/127 (70%)
Frame = +3 / -2
Query: 228 WSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG 407
W S MGR CC K+ L +G W+ +ED L ++I HG G W ++P+ AGL R
Sbjct: 677 W*SYTKRISRMGRSPCCSKEGLNRGAWTAKEDMILSDYIRIHGDGGWRNLPQNAGLMRRA 498
Query: 408 KSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNS 587
KSCR+RW+NYLRP +KRG + DEE+LII +H +LGNRWS IA +LPGRTDNEIKN WN+
Sbjct: 497 KSCRIRWLNYLRPGIKRGNISHDEEELIIRMHRLLGNRWSLIAGRLPGRTDNEIKNYWNT 318
Query: 588 CIKKKLR 608
++KKLR
Sbjct: 317 HLRKKLR 297
Score = 81.3 bits (171), Expect = 2e-014
Identities = 42/117 (35%), Positives = 58/117 (49%)
Frame = -2 / +3
Query: 608 PQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVY 429
PQLL VP +LD I+ Q C RPP+ E +V +++ F++G + +IV
Sbjct: 297 PQLLA*MGVPVVLDFIVCSTRQSACYQRPPIAEKTVHPNNKFLFIVGNVSTFNAGTKIVQ 476
Query: 428 PPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
PP TTL P K G +P+ +AM VI + ILL P P + AAR H
Sbjct: 477 PPYSTTLCTPHKTCVLGEISPSTIAMNSNVIRQNHILLGSPGPAVEPFF*AARRSTH 647
Score = 70.3 bits (147), Expect = 5e-011
Identities = 40/84 (47%), Positives = 40/84 (47%)
Frame = -3 / +1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
SF F FLISLSV PGS AI DH PR C SW P L G R*F H
Sbjct: 301 SFLRRWVFQ*FLISLSVRPGSRPAISDHRLPRRRCIRIISSSSSWEMFPRLMPGRR*FNH 480
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
LQLF L PA G L P P
Sbjct: 481 RILQLFARLIRPAFWGRFLHPPSP 552
Score = 38.6 bits (78), Expect = 0.15
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = +1 / -3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
W +LAA + G G RR+ IT + MAM G + P + G +RVV GG*TI
Sbjct: 646 WVDLLAAQKKGSTAGPGLPRRI*FCLITFEFMAMVDGEISPKTQVL*GVQRVVEYGG*TI 467
>gb|CO162411.1|CO162411 FLD1_35_D02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_35_D02_A029 3', mRNA sequence
Length = 717
Score = 182 bits (391), Expect = 1e-044
Identities = 68/98 (69%), Positives = 84/98 (85%)
Frame = +3 / -3
Query: 351 HGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQ 530
+G G W S+PK AG RCGKSCRLRWINYLRPDLKRG+F ++E++LII+LH+V+GN+WS
Sbjct: 712 NGEGSWRSLPKAAGPPRCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSL 533
Query: 531 IAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 532 IAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 419
Score = 106 bits (226), Expect = 6e-022
Identities = 45/108 (41%), Positives = 63/108 (58%)
Frame = -2 / +2
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 389 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 568
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAM 351
DDE F E +LE+ Q+VYP QPT LSA +P G PAA A+
Sbjct: 569 DDEFVFFFCEASTLEIGTQVVYPSQPTALSASRRPCSLGKGTPAAFAV 712
Score = 101 bits (216), Expect = 1e-020
Identities = 51/96 (53%), Positives = 55/96 (57%)
Frame = -3 / +3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 423 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 602
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P LRSG R*FIH SLQLFPHL PA+LG E Q P P
Sbjct: 603 PRLRSGRR*FIHRSLQLFPHLGGPAALGRERQLPSP 710
Score = 30.4 bits (60), Expect(2) = 0.19
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1 / -1
Query: 346 QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
++ A AAG FP G + AER VG G*T
Sbjct: 717 EATAKAAGVPFPRLQGRRDAERAVGCDG*T 628
Score = 25.4 bits (49), Expect(2) = 9.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / -1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 528 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 430
Score = 25.4 bits (49), Expect(2) = 0.19
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / -2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 548 QQVVSYCRKIAGADGQRDKELLEHSHQEK 462
Score = 24.4 bits (47), Expect(2) = 9.4
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / -2
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 686 SQGCRAAEMRKEL*AAMDKL 627
>gb|CO201585.1|CO201585 RTCNT2_6_F07.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_6_F07_A029 5', mRNA sequence
Length = 859
Score = 181 bits (389), Expect = 2e-044
Identities = 68/105 (64%), Positives = 87/105 (82%)
Frame = +3 / +3
Query: 330 LMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAV 509
L+ +I HG G W +PK AGL RCGKSCRLRWINYLRPDLKRG F+++E++LII+LH++
Sbjct: 3 LVAYIQAHGEGGWRYLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSEEEDELIIKLHSL 182
Query: 510 LGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
LGN+WS IAA++ GRTDNEIKN WN+ IK+KL +G+DP TH+ L
Sbjct: 183 LGNKWSLIAARMAGRTDNEIKNYWNTHIKRKLLSRGLDPQTHRSL 317
Score = 97.3 bits (206), Expect = 3e-019
Identities = 42/104 (40%), Positives = 62/104 (59%)
Frame = -2 / -3
Query: 662 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 483
AV+ ++ +G+GI + Q D VP IL LI+ PP RCN RP V + ++ DD++
Sbjct: 335 AVVGRTQGAMGLGIESSAQQFPFDVGVPVILYLIVRPPGHSRCNKRPFVAQKRMEFDDKL 156
Query: 482 FFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAM 351
F L E +L++W Q+VYP +P TLSA + G PAA+A+
Sbjct: 155 VFFLREVSALQIWTQVVYPSEPATLSASQQSCGLGEVTPAALAV 24
Score = 95.0 bits (201), Expect = 2e-018
Identities = 49/94 (52%), Positives = 52/94 (55%)
Frame = -3 / -1
Query: 634 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPL 455
WV GS P +F LM F F ISLSV P AAI DHL PR+ S P
Sbjct: 307 WVWGSSPLLSNFLLMWVFQ*FFISLSVRPAILAAIRDHLLPRSEWSLMISSSSSSEKFPR 128
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
RSG R*FIH SLQLFPH SPA+LG Q P P
Sbjct: 127 FRSGRR*FIHRSLQLFPHRSSPAALGR*RQPPSP 26
>gb|BF609979.1|BF609979 NXSI_053_C11_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_053_C11 5' similar to Arabidopsis thaliana
sequence At1g66230 myb-related transcription factor,
putative see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 531
Score = 180 bits (388), Expect = 3e-044
Identities = 71/107 (66%), Positives = 80/107 (74%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L+KG W+ EED KL+N IT HGHGCW VPKLAGL RCG SC LRW N
Sbjct: 199 KMGRQPCCDKVGLKKGPWTAEEDRKLVNFITLHGHGCWREVPKLAGLLRCGXSCXLRWTN 378
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKN 575
YLRPDLKRG ++ EE LII+LHA +GN S+IAAQLP TDNE N
Sbjct: 379 YLRPDLKRGLLSESEEKLIIDLHAAIGNXXSRIAAQLPXXTDNEXXN 519
Score = 91.8 bits (194), Expect = 1e-017
Identities = 45/109 (41%), Positives = 51/109 (46%)
Frame = -3 / -2
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
F SLSV G+CAAI D FP AC N P +SG +*F+ + QL PHL
Sbjct: 518 FXXSLSVXXGNCAAIRDXXFPMAACRSMMSFSSDSDNNPRFKSGRK*FVQRNXQLXPHLS 339
Query: 394 SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL*QQECLPISTQ 248
PASLGT Q PWPC V+ L Q CLPI Q
Sbjct: 338 RPASLGTSRQHPWPCRVIKFTSFLSSSAVHGPFFNPTLSQHGCLPIFCQ 192
Score = 90.9 bits (192), Expect = 3e-017
Identities = 45/110 (40%), Positives = 65/110 (59%)
Frame = -2 / -1
Query: 587 RVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTL 408
RV IL L+IS WQLR + P +P S+ ++DE+ + +L++ Q++ P Q TTL
Sbjct: 531 RVXVILXLVISSXWQLRSDS*PXIPYGSM*INDELLL*FRQ*STLQIRAQVICPTQXTTL 352
Query: 407 SAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
+ + S+FG APA+MAM IH+F + L P L Q V AR+PPH
Sbjct: 351 ATSKQTSKFGYFAPASMAMQGDKIHQFSVFLCSPWTLLQSHFVTARLPPH 202
Score = 48.7 bits (100), Expect = 1e-004
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +2 / +3
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
+GEA +L Q+ E+G++ G +T E ++ AWPW+L +QT W++ + EL +DKL
Sbjct: 201 NGEATVL*QSGIEEGSMDCRGRQKTGEFYHPAWPWMLARSTQTCWSA*MWXELXIALDKL 380
Score = 40.5 bits (82), Expect = 0.042
Identities = 24/54 (44%), Positives = 27/54 (50%)
Frame = +1 / +2
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVV 417
+WGG A T * R G R+ N *I MAM AGA +PN L RVV
Sbjct: 200 KWGGNRAVTKWD*RRVHGLQRKTENW*ILSPCMAMDAGAKYPNLLVCLDVARVV 361
Score = 39.1 bits (79), Expect = 0.11
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = -1 / -3
Query: 441 SDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNAS 262
+ +LS + YNS Q+VW +S HGHA +S V P + P S C S AS
Sbjct: 385 ASNLSNAXYNSXHI*ADQQVWVLRASIHGHAG**NSPVFCLPLQSMDPSSIPLCHSTVAS 206
Query: 261 P 259
P
Sbjct: 205 P 203
>gb|DR051127.1|DR051127 RTBOR1_27_G08.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_27_G08_A029 5', mRNA sequence
Length = 772
Score = 180 bits (388), Expect = 3e-044
Identities = 71/118 (60%), Positives = 86/118 (72%)
Frame = +3 / +2
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
++ G S KQ L +G W+ EED L +I HG G W +P+ AGL RCGKSCRLRW+
Sbjct: 32 IQDG*ISLLLKQGLNRGAWTKEEDMILSTYIQTHGDGGWKILPQKAGLNRCGKSCRLRWM 211
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
NYLRPD+KRG + DEEDLII +H +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 212 NYLRPDIKRGRISADEEDLIIRMHRLLGNRWSLIAGRLPGRTDNEIKNYWNTQLSKKL 385
Score = 73.9 bits (155), Expect = 4e-012
Identities = 42/84 (50%), Positives = 43/84 (51%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
SF L F FLISLSVLPGS AI DH PR C S P L SG R*FI
Sbjct: 384 SFLLS*VFQ*FLISLSVLPGSRPAIRDHRLPRRRCIRIIRSSSSAEILPRLMSGRR*FIQ 205
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
+LQLFPH PA G P P
Sbjct: 204 RNLQLFPHRLRPAFWGRIFHPPSP 133
Score = 65.2 bits (136), Expect = 1e-009
Identities = 38/120 (31%), Positives = 56/120 (46%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
+L VP ILD ++ + CN PP+ + ++ + + V G + V QI++P
Sbjct: 385 ELFAKLSVPVILDFVVCSTGESSCNQGPPIAKKAMHPYN*ILLVGGNPSAFNVGTQIIHP 206
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAM 246
TTLSAP+K G P+ +AM V E IL GP P + L P LN +
Sbjct: 205 T*STTLSAPVKTCFLGKNFPSTIAMGLNVCGENHILFFGPGPTIEPLFEQQGDLPILNIL 26
Score = 34.5 bits (69), Expect = 2.6
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = +1 / +3
Query: 301 GSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
G GP +R+ S T + MAM G FP GAERVV G* I
Sbjct: 81 GPGPKKRI*FSPHTFKPMAMVDGKFFPKKQVLTGAERVVDYVG*II 218
Score = 33.1 bits (66), Expect = 6.8
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +2 / +1
Query: 272 LLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLS 439
L Q A+ L G ++ H+ W W +E S + VRKEL* +D+LS
Sbjct: 52 LAAQTRAQSWGLDQRRGYDSLHIHSNPWRWWMENSSPKSRS*PVRKEL*ITLDELS 219
>gb|DT633408.1|DT633408 EST1148339 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFU59 3' end, mRNA sequence
Length = 690
Score = 145 bits (312), Expect(2) = 3e-044
Identities = 56/97 (57%), Positives = 74/97 (76%)
Frame = +3 / +1
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAA 539
G W ++P+ AGL+RCGKSCRLRW+NYLRP+LK G F+++E+++I L +G+RWS IAA
Sbjct: 181 GNWIALPQKAGLKRCGKSCRLRWLNYLRPNLKHGGFSEEEDNMIYSLFLGIGSRWSMIAA 360
Query: 540 QLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTE 650
QLPGRTDN+IKN WNS +KKKL K D T + +
Sbjct: 361 QLPGRTDNDIKNHWNSRLKKKLLGKRKDNQTQSQVKQ 471
Score = 59.7 bits (124), Expect = 7e-008
Identities = 32/100 (32%), Positives = 49/100 (49%)
Frame = -2 / -1
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
+G+ I +F + LL VP + +II PWQL CN RPP + + + + F E
Sbjct: 456 LGLIIFSFP*KFLLQP*VPVVFYIIICSPWQLGCNHRPPATDTEKEAINHIIFFF*EPSV 277
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVI 336
L + P +V P + T AP + S G P A + + + I
Sbjct: 276 L*IRP*VV*PSKSTAFPAPFQTSFLG*SDPVASSAILFYI 157
Score = 54.7 bits (113), Expect(2) = 3e-044
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG 362
EMGR CC K +++G WSPEED KL +I K+G G
Sbjct: 73 EMGRAPCCDKANVKRGPWSPEEDSKLKEYIEKYGTG 180
Score = 52.8 bits (109), Expect(2) = 9e-015
Identities = 26/42 (61%), Positives = 27/42 (64%)
Frame = -3 / -2
Query: 637 LWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
LWV S F SFF EF F ISLSVLPG+ AAI DHL P
Sbjct: 458 LWV*LSFRFPRSFFFSLEFQWFFISLSVLPGNWAAIIDHLLP 333
Score = 48.7 bits (100), Expect(2) = 9e-015
Identities = 22/36 (61%), Positives = 23/36 (63%)
Frame = -3 / -2
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQP 359
N P R GLR*F HLS QLFPHL PA G +Q P
Sbjct: 287 NPPCFRFGLR*FNHLSRQLFPHLFKPAFWGKAIQLP 180
Score = 31.8 bits (63), Expect(3) = 2e-006
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2 / +3
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPW 361
DG++ LL Q++ E+ +V *GG T + K W W
Sbjct: 75 DGKSPLL*QSKCEERTMVS*GGL*TEGIYRKVWHW 179
Score = 30.4 bits (60), Expect(3) = 2e-006
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +2 / +3
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQAT 643
QVV +CS ARE+ ** ++ +EL +EE E +P+++
Sbjct: 339 QVVYDCSPVARENR**YKKPLELKAEEETSRETKR*SNPESS 464
Score = 27.6 bits (54), Expect(3) = 2e-006
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1 / +2
Query: 361 AAGALFPNSLGFKGAERVVG*GG*TI*GQ 447
A G+L+P L KGA + V G*T *G+
Sbjct: 182 ATGSLYPRKLV*KGAGKAVDLDG*TT*GR 268
>gb|DR686505.1|DR686505 EST1076583 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABG77 3' end, mRNA sequence
Length = 681
Score = 145 bits (312), Expect(2) = 3e-044
Identities = 56/97 (57%), Positives = 74/97 (76%)
Frame = +3 / +2
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAA 539
G W ++P+ AGL+RCGKSCRLRW+NYLRP+LK G F+++E+++I L +G+RWS IAA
Sbjct: 173 GNWIALPQKAGLKRCGKSCRLRWLNYLRPNLKHGGFSEEEDNMIYSLFLGIGSRWSMIAA 352
Query: 540 QLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTE 650
QLPGRTDN+IKN WNS +KKKL K D T + +
Sbjct: 353 QLPGRTDNDIKNHWNSRLKKKLLGKRKDNQTQSQVKQ 463
Score = 59.7 bits (124), Expect = 7e-008
Identities = 32/100 (32%), Positives = 49/100 (49%)
Frame = -2 / -3
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
+G+ I +F + LL VP + +II PWQL CN RPP + + + + F E
Sbjct: 448 LGLIIFSFP*KFLLQP*VPVVFYIIICSPWQLGCNHRPPATDTEKEAINHIIFFF*EPSV 269
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVI 336
L + P +V P + T AP + S G P A + + + I
Sbjct: 268 L*IRP*VV*PSKSTAFPAPFQTSFLG*SDPVASSAILFYI 149
Score = 54.7 bits (113), Expect(2) = 3e-044
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG 362
EMGR CC K +++G WSPEED KL +I K+G G
Sbjct: 65 EMGRAPCCDKANVKRGPWSPEEDSKLKEYIEKYGTG 172
Score = 52.8 bits (109), Expect(2) = 9e-015
Identities = 26/42 (61%), Positives = 27/42 (64%)
Frame = -3 / -1
Query: 637 LWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
LWV S F SFF EF F ISLSVLPG+ AAI DHL P
Sbjct: 450 LWV*LSFRFPRSFFFSLEFQWFFISLSVLPGNWAAIIDHLLP 325
Score = 48.7 bits (100), Expect(2) = 9e-015
Identities = 22/36 (61%), Positives = 23/36 (63%)
Frame = -3 / -1
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQP 359
N P R GLR*F HLS QLFPHL PA G +Q P
Sbjct: 279 NPPCFRFGLR*FNHLSRQLFPHLFKPAFWGKAIQLP 172
Score = 31.8 bits (63), Expect(3) = 2e-006
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPW 361
DG++ LL Q++ E+ +V *GG T + K W W
Sbjct: 67 DGKSPLL*QSKCEERTMVS*GGL*TEGIYRKVWHW 171
Score = 30.4 bits (60), Expect(3) = 2e-006
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +2 / +1
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQAT 643
QVV +CS ARE+ ** ++ +EL +EE E +P+++
Sbjct: 331 QVVYDCSPVARENR**YKKPLELKAEEETSRETKR*SNPESS 456
Score = 27.6 bits (54), Expect(3) = 2e-006
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1 / +3
Query: 361 AAGALFPNSLGFKGAERVVG*GG*TI*GQ 447
A G+L+P L KGA + V G*T *G+
Sbjct: 174 ATGSLYPRKLV*KGAGKAVDLDG*TT*GR 260
>gb|CF385274.1|CF385274 RTDR1_2_D01.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_2_D01_A015 5', mRNA
sequence
Length = 703
Score = 179 bits (386), Expect = 5e-044
Identities = 67/93 (72%), Positives = 82/93 (88%)
Frame = +3 / +2
Query: 366 WSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQL 545
W S+PK AGL RCGKSCRLRWINYLRPDLKRG+F ++E++LII+LH+V+GN+WS IA +L
Sbjct: 5 WRSLPKAAGLPRCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRL 184
Query: 546 PGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
PGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 185 PGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 283
Score = 101 bits (216), Expect = 1e-020
Identities = 43/104 (41%), Positives = 60/104 (57%)
Frame = -2 / -1
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 313 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 134
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPA 363
DDE F E +LE+ Q+VYP QPT LSA +P G PA
Sbjct: 133 DDEFVFFFCEASTLEIGTQVVYPSQPTALSASRQPCSLGKGTPA 2
Score = 99.1 bits (210), Expect = 9e-020
Identities = 50/92 (54%), Positives = 54/92 (58%)
Frame = -3 / -2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 279 GRWDWGSIPLINNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 100
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQ 365
P LRSG R*FIH SLQLFPHL SPA+LG E Q
Sbjct: 99 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQ 4
Score = 26.7 bits (52), Expect(2) = 2.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1 / +3
Query: 364 AGALFPNSLGFKGAERVVG*GG*T 435
AG FP G + AER VG G*T
Sbjct: 3 AGVPFPRLQGCRDAERAVGCDG*T 74
Score = 25.4 bits (49), Expect(2) = 9.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1 / +3
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTP 633
Q C+GG R R GT SR + + P+P
Sbjct: 174 QEDCRGGRTTR*RTTGTLTSRENC*SRESTPSP 272
Score = 25.4 bits (49), Expect(2) = 2.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS C A D D+E +E HQE+
Sbjct: 154 QQVVSYCRKIAGADGQRDKELLEHSHQEK 240
Score = 24.4 bits (47), Expect(2) = 9.4
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 377 SQTRWASKVRKEL*AEVDKL 436
SQ A+++RKEL*A +DKL
Sbjct: 16 SQGCRAAEMRKEL*AAMDKL 75
>gb|DT633531.1|DT633531 EST1148462 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFV86 3' end, mRNA sequence
Length = 817
Score = 147 bits (315), Expect(2) = 6e-044
Identities = 55/95 (57%), Positives = 75/95 (78%)
Frame = +3 / +3
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAA 539
G W ++P+ AGL+RCGKSCRLRW+NYLRPD+K G F+++E+D+I L+ +G+RWS IAA
Sbjct: 267 GNWIALPRKAGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDDIICTLYTSIGSRWSIIAA 446
Query: 540 QLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
QLPGRTDN+IKN WN+ +KKKL K N ++ +
Sbjct: 447 QLPGRTDNDIKNYWNTRLKKKLLGKCSKDNDNQQI 551
Score = 75.3 bits (158), Expect = 1e-012
Identities = 38/82 (46%), Positives = 45/82 (54%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FF F F +SLSV PG+ AA+ DHL P S +P L SGL+*F H
Sbjct: 511 NFFFSRVFQ*FFMSLSVRPGNWAAMIDHLLPMLVYRVQMMSSSSSEKSPCLISGLK*FSH 332
Query: 424 LSLQLFPHL*SPASLGTELQQP 359
LSLQL PHL PA G +Q P
Sbjct: 331 LSLQLLPHLFKPALRGKAIQLP 266
Score = 73.5 bits (154), Expect = 5e-012
Identities = 33/83 (39%), Positives = 45/83 (54%)
Frame = -2 / -3
Query: 647 SKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 468
S L+ V + AF Q L RVP +L +++ PWQL CN RP +Q ++V F
Sbjct: 554 SDLLIIVVLAAFAKQFFLQPRVPVVLYVVVCSPWQLGCNDRPSASNAGIQGANDVVFFF* 375
Query: 467 ECPSLEVWPQIVYPPQPTTLSAP 399
E L + PQI+ P QP TL+ P
Sbjct: 374 EVTMLNIRPQIIQPSQPATLATP 306
Score = 52.4 bits (108), Expect(2) = 6e-044
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG 362
+MGR CC K +++G WSPEED L N + KHG G
Sbjct: 159 KMGRAPCCDKANVKRGPWSPEEDTILKNFVEKHGTG 266
>gb|DR686108.1|DR686108 EST1076186 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABC41 3' end, mRNA sequence
Length = 752
Score = 147 bits (315), Expect(2) = 6e-044
Identities = 55/95 (57%), Positives = 75/95 (78%)
Frame = +3 / +1
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAA 539
G W ++P+ AGL+RCGKSCRLRW+NYLRPD+K G F+++E+D+I L+ +G+RWS IAA
Sbjct: 259 GNWIALPRKAGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDDIICTLYTSIGSRWSIIAA 438
Query: 540 QLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
QLPGRTDN+IKN WN+ +KKKL K N ++ +
Sbjct: 439 QLPGRTDNDIKNYWNTRLKKKLLGKCSKDNDNQQI 543
Score = 75.3 bits (158), Expect = 1e-012
Identities = 38/82 (46%), Positives = 45/82 (54%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FF F F +SLSV PG+ AA+ DHL P S +P L SGL+*F H
Sbjct: 503 NFFFSRVFQ*FFMSLSVRPGNWAAMIDHLLPMLVYRVQMMSSSSSEKSPCLISGLK*FSH 324
Query: 424 LSLQLFPHL*SPASLGTELQQP 359
LSLQL PHL PA G +Q P
Sbjct: 323 LSLQLLPHLFKPALRGKAIQLP 258
Score = 73.5 bits (154), Expect = 5e-012
Identities = 33/83 (39%), Positives = 45/83 (54%)
Frame = -2 / -3
Query: 647 SKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 468
S L+ V + AF Q L RVP +L +++ PWQL CN RP +Q ++V F
Sbjct: 546 SDLLIIVVLAAFAKQFFLQPRVPVVLYVVVCSPWQLGCNDRPSASNAGIQGANDVVFFF* 367
Query: 467 ECPSLEVWPQIVYPPQPTTLSAP 399
E L + PQI+ P QP TL+ P
Sbjct: 366 EVTMLNIRPQIIQPSQPATLATP 298
Score = 52.4 bits (108), Expect(2) = 6e-044
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG 362
+MGR CC K +++G WSPEED L N + KHG G
Sbjct: 151 KMGRAPCCDKANVKRGPWSPEEDTILKNFVEKHGTG 258
>gb|DR744906.1|DR744906 RTCU1_25_E06.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_25_E06_A029 5', mRNA sequence
Length = 691
Score = 147 bits (315), Expect(2) = 6e-044
Identities = 55/95 (57%), Positives = 75/95 (78%)
Frame = +3 / +3
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAA 539
G W ++P+ AGL+RCGKSCRLRW+NYLRPD+K G F+++E+D+I L+ +G+RWS IAA
Sbjct: 228 GNWIALPRKAGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDDIICTLYTSIGSRWSIIAA 407
Query: 540 QLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
QLPGRTDN+IKN WN+ +KKKL K N ++ +
Sbjct: 408 QLPGRTDNDIKNYWNTRLKKKLLGKCSKDNDNQQI 512
Score = 75.3 bits (158), Expect = 1e-012
Identities = 38/82 (46%), Positives = 45/82 (54%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FF F F +SLSV PG+ AA+ DHL P S +P L SGL+*F H
Sbjct: 472 NFFFSRVFQ*FFMSLSVRPGNWAAMIDHLLPMLVYRVQMMSSSSSEKSPCLISGLK*FSH 293
Query: 424 LSLQLFPHL*SPASLGTELQQP 359
LSLQL PHL PA G +Q P
Sbjct: 292 LSLQLLPHLFKPALRGKAIQLP 227
Score = 73.5 bits (154), Expect = 5e-012
Identities = 33/83 (39%), Positives = 45/83 (54%)
Frame = -2 / -3
Query: 647 SKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 468
S L+ V + AF Q L RVP +L +++ PWQL CN RP +Q ++V F
Sbjct: 515 SDLLIIVVLAAFAKQFFLQPRVPVVLYVVVCSPWQLGCNDRPSASNAGIQGANDVVFFF* 336
Query: 467 ECPSLEVWPQIVYPPQPTTLSAP 399
E L + PQI+ P QP TL+ P
Sbjct: 335 EVTMLNIRPQIIQPSQPATLATP 267
Score = 52.4 bits (108), Expect(2) = 6e-044
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG 362
+MGR CC K +++G WSPEED L N + KHG G
Sbjct: 120 KMGRAPCCDKANVKRGPWSPEEDTILKNFVEKHGTG 227
>gb|AW065064.1|AW065064 ST39B10 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST39B10, mRNA sequence
Length = 587
Score = 179 bits (385), Expect = 7e-044
Identities = 69/112 (61%), Positives = 82/112 (73%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K+ L +G W+ ED L +I HG G W S+PK AGL+RCGKSCRLRW+NY
Sbjct: 74 MGRSPCCAKEGLNRGAWTKTEDIILSEYIRIHGDGGWRSLPKKAGLKRCGKSCRLRWLNY 253
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCI 593
LRPD+KRG + EE+LII LH +LGNRWS IA +LPGRTDNEIKN W +
Sbjct: 254 LRPDIKRGDISPAEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWEHSV 409
Score = 75.8 bits (159), Expect = 1e-012
Identities = 41/113 (36%), Positives = 56/113 (49%)
Frame = -2 / -2
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
LD P +LD ++ P Q C PP+ + +VQ ++++ G + V +IV P
Sbjct: 412 LDGVFPVVLDFVVCSPGQPSCYQ*PPITKKAVQPNNQLLLSRGNVSAFNVGTKIV*PT*S 233
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
TTLS PLKP FG +P +AM V E IL P P + L AAR H
Sbjct: 232 TTLSTPLKPCFFGETSPPTIAMNSNVFGENNILRFRPGPAVEPFLCAARRSTH 74
Score = 73.5 bits (154), Expect = 5e-012
Identities = 38/74 (51%), Positives = 41/74 (55%)
Frame = -3 / -3
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
FLISLSV PGS AI DH PR C + +P L SG R*F +LQLFPH
Sbjct: 390 FLISLSVRPGSRPAISDHRLPRRRCSRIISSSSAGEMSPRLMSGRR*FNQRNLQLFPHRL 211
Query: 394 SPASLGTELQQPWP 353
SPA LG L P P
Sbjct: 210 SPAFLGRLLHPPSP 169
Score = 45.1 bits (92), Expect = 0.002
Identities = 26/61 (42%), Positives = 31/61 (50%)
Frame = +1 / +3
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RW +LAA + G G RR+ S T + MAM G + P G G ERVV G*T
Sbjct: 72 RWVDLLAAQRKGSTAGPGRKRRILFSPNTFEFMAMVGGEVSPKKQGLSGVERVVDYVG*T 251
Query: 436 I 438
I
Sbjct: 252 I 254
Score = 36.8 bits (74), Expect = 0.53
Identities = 22/61 (36%), Positives = 26/61 (42%)
Frame = -1 / -1
Query: 438 DSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASP 259
DSL+ YNSF T A W S+ H H C +PP +R A SK P
Sbjct: 254 DSLTNVIYNSFHTA*ALLFWGDFSTHHRHEFECIRRE*YPPFSSRPRG*ALPLRSKEIYP 75
Query: 258 S 256
S
Sbjct: 74 S 72
Score = 33.6 bits (67), Expect = 4.9
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
DG LL + A+ L GG + H+ +W W +E Q A V KEL* + KL
Sbjct: 73 DG*ISLLRKGRAQPRGLDENGGYYSLRIHSNSWRWWVEKSPQKSRA*AVWKEL*ITLVKL 252
Query: 437 S 439
S
Sbjct: 253 S 255
>gb|CF475091.1|CF475091 RTWW2_5_F10.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_5_F10_A021 5', mRNA sequence
Length = 707
Score = 144 bits (309), Expect(2) = 4e-043
Identities = 52/88 (59%), Positives = 69/88 (78%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K ++KG W+P+ED+ L+++I HGH W ++PK AGL RCGKSCRLRW NY
Sbjct: 11 MGRAPCCDKMAVKKGPWTPDEDKLLVDYINNHGHSNWRALPKQAGLLRCGKSCRLRWTNY 190
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNR 521
LRP++KRG F+ +EED II+LH ++GNR
Sbjct: 191 LRPNIKRGNFSPEEEDQIIKLHELIGNR 274
Score = 62.5 bits (130), Expect(2) = 1e-014
Identities = 31/88 (35%), Positives = 43/88 (48%)
Frame = -2 / -2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCY 342
PV + +Q +D +F + PS +V Q+V PPQ TTLS KP G P A+AM+
Sbjct: 274 PVTYELMQFNDLIFLFWTKIPSFDVGSQVVGPPQATTLSTSQKPCLLGQCTPVAVAMVVN 95
Query: 341 VIHEFLILLRGPEPLSQLLLVAARMPPH 258
VI + I + P + AR H
Sbjct: 94 VIDQ*FIFIWSPGAFLYCHFITARSSTH 11
Score = 58.3 bits (121), Expect(2) = 3e-010
Identities = 31/91 (34%), Positives = 39/91 (42%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFV 344
HL P ++C S PLL GLR* +H QLFPH SPA LG+ Q WP +
Sbjct: 276 HLLPMSSCSLMI*SSSSGLKFPLLMLGLR*LVHRRRQLFPHRRSPACLGSARQLLWPWLL 97
Query: 343 MXXXXXXXXXXXXXXXXXFCL*QQECLPIST 251
M L QQ P+++
Sbjct: 96 M*STSSLSSSGVQGPFFTAILSQQGARPMAS 4
Score = 56.1 bits (116), Expect(2) = 4e-043
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +3 / +1
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
RWS IA+ LPGRTDNEIKN+W++ +KK+L
Sbjct: 430 RWSTIASHLPGRTDNEIKNVWSTRLKKRL 516
Score = 42.8 bits (87), Expect = 0.009
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +1 / +3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
W +LA * + G ++ IT +MA A G P+ GF ERVV GG T
Sbjct: 12 WVELLAVIKWQ*RKAPGLQMKINYWSITLTTMATATGVHCPSKQGFCDVERVVACGGPTT 191
Query: 439 *GQTSREG 462
* TS+EG
Sbjct: 192 *DPTSKEG 215
Score = 42.3 bits (86), Expect(2) = 1e-014
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -3 / -1
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHL 518
F H FLISLSVLPG C AI DHL
Sbjct: 509 FFKRVLHTFLISLSVLPGRCEAIVDHL 429
Score = 31.8 bits (63), Expect(2) = 3e-010
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2 / -3
Query: 626 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRP 522
G+ + LL P +LD ++ WQ+R N RP
Sbjct: 537 GLGFHTCETLLQTCAPHVLDFVVCSSWQVRSNSRP 433
>gb|CO368386.1|CO368386 RTK1_40_G08.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_40_G08_A029 3', mRNA sequence
Length = 894
Score = 176 bits (378), Expect = 6e-043
Identities = 68/112 (60%), Positives = 83/112 (74%)
Frame = +3 / -2
Query: 270 SCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPD 449
S CY + +G W+P ED L +I HG W ++ K AGL+RCGKSCRLRW+NYLRPD
Sbjct: 812 SSCYSKGHSRGAWTPIEDMILSEYIRIHGSDGWKNIAKRAGLKRCGKSCRLRWLNYLRPD 633
Query: 450 LKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
+KRG + DEEDLII LH +LGNRWS IA +LPGRTDNEIKN W++ + KKL
Sbjct: 632 IKRGNISPDEEDLIIRLHGLLGNRWSLIAGRLPGRTDNEIKNYWHTHMSKKL 477
Score = 62.5 bits (130), Expect = 1e-008
Identities = 34/65 (52%), Positives = 35/65 (53%)
Frame = -3 / +1
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
FLISLSV PGS AI DH PR C S P L SG R*F +LQLFPH
Sbjct: 508 FLISLSVRPGSRPAIKDHRLPRRPCNLIMRSSSSGEMLPRLMSGRR*FNQRNLQLFPHRL 687
Query: 394 SPASL 380
PA L
Sbjct: 688 RPARL 702
Score = 61.6 bits (128), Expect = 2e-008
Identities = 36/112 (32%), Positives = 51/112 (45%)
Frame = -2 / +3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL VP ILD ++ C RP + + ++Q ++EV + + V +IV P
Sbjct: 477 QLLAHMSVPVILDFVVCSTR*SSCYQRPSIAKKAMQPNNEVLLIRRNVTTFNVGAKIVQP 656
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAAR 270
TLS K F + P+ AM V E IL RGP P + +A R
Sbjct: 657 A*SATLSTSFKACSFSDIFPSITAMNSNVFRENHILDRGPSPTAMTF*IARR 812
>gb|DR081462.1|DR081462 RTFEPL1_29_G04.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_29_G04_A029 5', mRNA sequence
Length = 518
Score = 176 bits (378), Expect = 6e-043
Identities = 68/116 (58%), Positives = 84/116 (72%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR C K+ L +G W+ ED L +I HG G W + K AGL+RC KSCRLRW+N
Sbjct: 39 KMGRSPCPPKEALNRGAWTGMEDTILTEYIRVHGSGGWKDISKRAGLKRCAKSCRLRWLN 218
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
YLRPD+KRG + +EE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KK
Sbjct: 219 YLRPDIKRGNISPEEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTHMSKK 386
Score = 75.3 bits (158), Expect = 1e-012
Identities = 40/116 (34%), Positives = 56/116 (48%)
Frame = -2 / -1
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
LL VP ILD ++ Q C RPP+ + ++Q ++E+FF+ + + +IV P
Sbjct: 386 LLAHMSVPVILDFVVCSTRQSSCYQRPPISKKAMQPNNELFFLRRNVTTFNIGTKIVQPT 207
Query: 422 QPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
Q TL PLK FG+ P AM V+ E IL P P + AR HL
Sbjct: 206 QSATLCTPLKTCSFGDIFPTTTAMNSNVLGENRILHACPSPTVKRFFWGARGSTHL 39
Score = 73.0 bits (153), Expect = 7e-012
Identities = 41/83 (49%), Positives = 43/83 (51%)
Frame = -3 / -2
Query: 601 FFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHL 422
F L+ F FLISLSV PGS AI DH FPR C S P L SG R*F
Sbjct: 385 FLLI*VFQ*FLISLSVRPGSRPAIRDHRFPRRRCNRIMSSSSSGEMLPRLISGRR*FSQR 206
Query: 421 SLQLFPHL*SPASLGTELQQPWP 353
+LQLF HL PA L Q P P
Sbjct: 205 NLQLFAHLLRPALLEISFQPPLP 137
>gb|DR015700.1|DR015700 STRS1_5_D02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_D02_A034 3', mRNA sequence
Length = 909
Score = 175 bits (376), Expect = 1e-042
Identities = 61/124 (49%), Positives = 92/124 (74%)
Frame = +3 / +1
Query: 279 YKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKR 458
+++ L++G W+ ED+ L+ +I HG G W +P+ AGL+R GKSCRLRW+NYLRPD+KR
Sbjct: 55 HEEHLKRGAWTASEDKILIEYIKTHGTGQWRGLPRKAGLERSGKSCRLRWLNYLRPDIKR 234
Query: 459 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHK 638
G + +E++L++ LH +LGNRW+ IA +LPGRTDNE+KN WN+ + K++++ +P K
Sbjct: 235 GNISPEEDELLVRLHRLLGNRWTLIAGRLPGRTDNEVKNYWNTQLSKRVQRGEFEPKFQK 414
Query: 639 PLTE 650
P E
Sbjct: 415 PFKE 426
Score = 65.2 bits (136), Expect = 1e-009
Identities = 44/103 (42%), Positives = 48/103 (46%)
Frame = -3 / -2
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSW 470
S+ G LGS + L F F SLSV PGS AI HL PR C S
Sbjct: 425 SLKGF*NLGSNSPLWTLLLSWVFQ*FFTSLSVRPGSRPAINVHLLPRRRCNLTRSSSSSG 246
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P L SG R*F +LQLFP L PA LG L P P +M
Sbjct: 245 EIFPRLISGRR*FNQRNLQLFPLLSRPAFLGRPLH*PVP*VLM 117
>gb|CO170303.1|CO170303 NDL1_13_D05.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_13_D05_A029 3', mRNA sequence
Length = 798
Score = 151 bits (325), Expect(2) = 1e-042
Identities = 58/82 (70%), Positives = 68/82 (82%)
Frame = +3 / -1
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAA 539
G W S+PK AGL+RCGKSCRLRW+NYLRPD+KRG + EE+LII LH +LGNRWS IA
Sbjct: 657 GGWRSLPKKAGLKRCGKSCRLRWLNYLRPDIKRGDISPAEEELIIRLHRLLGNRWSLIAG 478
Query: 540 QLPGRTDNEIKNLWNSCIKKKL 605
+LPGRTDNEIKN WN+ + KKL
Sbjct: 477 RLPGRTDNEIKNYWNTRLSKKL 412
Score = 77.6 bits (163), Expect = 3e-013
Identities = 41/82 (50%), Positives = 44/82 (53%)
Frame = -3 / +2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
SF L F FLISLSV PGS AI DH PR C + +P L SG R*F
Sbjct: 413 SFLLRRVFQ*FLISLSVRPGSRPAISDHRLPRRRCSRIISSSSAGEMSPRLMSGRR*FNQ 592
Query: 424 LSLQLFPHL*SPASLGTELQQP 359
+LQLFPH SPA LG L P
Sbjct: 593 RNLQLFPHRLSPAFLGRLLHPP 658
Score = 60.6 bits (126), Expect = 4e-008
Identities = 29/80 (36%), Positives = 42/80 (52%)
Frame = -2 / +1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QL VP +LD ++ P Q C PP+ + +VQ ++++ G + V +IV P
Sbjct: 412 QLFA*TSVPVVLDFVVCSPGQPSCYQ*PPITKKAVQPNNQLLLSRGNVSAFNVGTKIV*P 591
Query: 425 PQPTTLSAPLKPSEFGNRAP 366
TTLS PLKP FG +P
Sbjct: 592 T*STTLSTPLKPCFFGETSP 651
Score = 43.2 bits (88), Expect(2) = 1e-042
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +3 / -3
Query: 231 SSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
+S L MGR CC K+ L +G W+ ED L +I HG G P+
Sbjct: 787 NSYTLRKSTMGRSPCCAKEGLNRGAWTKTEDIILSEYIRIHGDGWVEKSPQ 635
>gb|DR179654.1|DR179654 RTMNUT1_23_B05.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_23_B05_A029 5', mRNA sequence
Length = 685
Score = 167 bits (360), Expect(2) = 1e-042
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL RCGKSCRLRWINYLRPDLKRG+F ++E++LII+LH+V+GN+WS IA +LPGRTDNE
Sbjct: 42 AGLPRCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNE 221
Query: 567 IKNLWNSCIKKKLRQKGIDPNTHKPL 644
IKN WN+ IK+KL KGIDP +H+PL
Sbjct: 222 IKNYWNTHIKRKLLIKGIDPQSHRPL 299
Score = 97.7 bits (207), Expect = 2e-019
Identities = 41/99 (41%), Positives = 58/99 (58%)
Frame = -2 / -3
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 329 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 150
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFG 378
DDE F E +LE+ Q+VYP QPT LSA +P G
Sbjct: 149 DDEFVFFFCEASTLEIGTQVVYPSQPTALSASRQPCSLG 33
Score = 91.8 bits (194), Expect = 1e-017
Identities = 46/86 (53%), Positives = 50/86 (58%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS+P +F LM F F ISLSV PG+ AI DHL P T S
Sbjct: 295 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 116
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPAS 383
P LRSG R*FIH SLQLFPHL SPA+
Sbjct: 115 PRLRSGRR*FIHRSLQLFPHLGSPAA 38
Score = 27.2 bits (53), Expect(2) = 1e-042
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3 / +1
Query: 345 TKHGHGCWSSVPKLAG 392
+ HG G W S+P+L G
Sbjct: 1 SSHGEGSWRSLPRLQG 48
>gb|CO368639.1|CO368639 RTK1_41_H02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_41_H02_A029 5', mRNA sequence
Length = 782
Score = 142 bits (304), Expect(2) = 2e-042
Identities = 51/80 (63%), Positives = 68/80 (85%)
Frame = +3 / +1
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAA 539
G W ++P+ AGL+RCGKSCRLRW+NYLRPD+K G F+++E+D+I L+ +G+RWS IAA
Sbjct: 514 GNWIALPRKAGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDDIICTLYTSIGSRWSIIAA 693
Query: 540 QLPGRTDNEIKNLWNSCIKK 599
QLPGRTDN+IKN WN+ +KK
Sbjct: 694 QLPGRTDNDIKNYWNTRLKK 753
Score = 76.7 bits (161), Expect = 5e-013
Identities = 39/85 (45%), Positives = 45/85 (52%)
Frame = -3 / -1
Query: 613 FCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR* 434
F FF F F +SLSV PG+ AA+ DHL P S +P L SGL+*
Sbjct: 767 FAKQFFFSRVFQ*FFMSLSVRPGNWAAMIDHLLPMLVYRVQMMSSSSSEKSPCLISGLK* 588
Query: 433 FIHLSLQLFPHL*SPASLGTELQQP 359
F HLSLQL PHL PA G +Q P
Sbjct: 587 FSHLSLQLLPHLFKPALRGKAIQLP 513
Score = 66.1 bits (138), Expect = 8e-010
Identities = 27/68 (39%), Positives = 38/68 (55%)
Frame = -2 / -3
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
+ L RVP +L +++ PWQL CN RP +Q ++V F E L + PQI+ P
Sbjct: 756 IFLQPRVPVVLYVVVCSPWQLGCNDRPSASNAGIQGANDVVFFF*EVTMLNIRPQIIQPS 577
Query: 422 QPTTLSAP 399
QP TL+ P
Sbjct: 576 QPATLATP 553
Score = 52.4 bits (108), Expect(2) = 2e-042
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG 362
+MGR CC K +++G WSPEED L N + KHG G
Sbjct: 406 KMGRAPCCDKANVKRGPWSPEEDTILKNFVEKHGTG 513
>gb|DR683147.1|DR683147 EST1073223 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAE70 3' end, mRNA sequence
Length = 768
Score = 172 bits (370), Expect = 8e-042
Identities = 64/106 (60%), Positives = 85/106 (80%)
Frame = +3 / +3
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L+KG W+ ED L+ ++ KHG G W++V K +GL RCGKSCRLRW N+LRP+LK+GAF
Sbjct: 243 LKKGPWTSAEDAILVEYVRKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFT 422
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 608
+EE +I+ELHA LGN+W+++AA LPGRTDNEIKN WN+ IK++ R
Sbjct: 423 AEEERIILELHAKLGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQR 560
Score = 79.4 bits (167), Expect = 8e-014
Identities = 42/88 (47%), Positives = 45/88 (51%)
Frame = -3 / -3
Query: 607 LSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FI 428
L L+ F F ISLSV PG AAI HL P A S AP R GL+*
Sbjct: 559 LCLLLIRVFQ*FFISLSVRPGR*AAIRAHLLPSLAWSSRIMRSSSAVKAPFFRLGLK*LA 380
Query: 427 HLSLQLFPHL*SPASLGTELQQPWPCFV 344
HLSLQLFPH SP T Q P PCF+
Sbjct: 379 HLSLQLFPHRDSPECFCTAFQFPSPCFL 296
Score = 53.3 bits (110), Expect = 6e-006
Identities = 30/102 (29%), Positives = 49/102 (48%)
Frame = -2 / -2
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
LD +P +L LI+ P + + P V + ++ + FF E ++ P ++ PPQP
Sbjct: 548 LDTGIPVVLYLIVCSPR*MSSHTSPFVAKLGMEFKNYAFFFCCEGTLFQIRP*MISPPQP 369
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQ 291
TTL P +P + P + V+++ I RGP L Q
Sbjct: 368 TTLPTPGQP*MLLHCIPIPFTVFSDVLNQNRIFCRGPWALFQ 243
Score = 33.1 bits (66), Expect = 6.8
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +1 / +1
Query: 292 *ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*G 444
*+R GPL++MR T ++ G + G G RVVG*GG I*G
Sbjct: 244 *KRAHGPLQKMRFWLSTSENTVKGIGMQCRSIQGCPGVGRVVG*GGLII*G 396
>gb|DT631233.1|DT631233 EST1146164 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF647 3' end, mRNA sequence
Length = 762
Score = 172 bits (370), Expect = 8e-042
Identities = 64/106 (60%), Positives = 85/106 (80%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L+KG W+ ED L+ ++ KHG G W++V K +GL RCGKSCRLRW N+LRP+LK+GAF
Sbjct: 181 LKKGPWTSAEDAILVEYVRKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFT 360
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 608
+EE +I+ELHA LGN+W+++AA LPGRTDNEIKN WN+ IK++ R
Sbjct: 361 AEEERIILELHAKLGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQR 498
Score = 79.4 bits (167), Expect = 8e-014
Identities = 42/88 (47%), Positives = 45/88 (51%)
Frame = -3 / -2
Query: 607 LSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FI 428
L L+ F F ISLSV PG AAI HL P A S AP R GL+*
Sbjct: 497 LCLLLIRVFQ*FFISLSVRPGR*AAIRAHLLPSLAWSSRIMRSSSAVKAPFFRLGLK*LA 318
Query: 427 HLSLQLFPHL*SPASLGTELQQPWPCFV 344
HLSLQLFPH SP T Q P PCF+
Sbjct: 317 HLSLQLFPHRDSPECFCTAFQFPSPCFL 234
Score = 53.3 bits (110), Expect = 6e-006
Identities = 30/102 (29%), Positives = 49/102 (48%)
Frame = -2 / -1
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
LD +P +L LI+ P + + P V + ++ + FF E ++ P ++ PPQP
Sbjct: 486 LDTGIPVVLYLIVCSPR*MSSHTSPFVAKLGMEFKNYAFFFCCEGTLFQIRP*MISPPQP 307
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQ 291
TTL P +P + P + V+++ I RGP L Q
Sbjct: 306 TTLPTPGQP*MLLHCIPIPFTVFSDVLNQNRIFCRGPWALFQ 181
Score = 33.1 bits (66), Expect = 6.8
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +1 / +2
Query: 292 *ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*G 444
*+R GPL++MR T ++ G + G G RVVG*GG I*G
Sbjct: 182 *KRAHGPLQKMRFWLSTSENTVKGIGMQCRSIQGCPGVGRVVG*GGLII*G 334
>gb|CO362169.1|CO362169 RTK1_1_F07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_1_F07_A029 5', mRNA sequence
Length = 809
Score = 171 bits (369), Expect = 1e-041
Identities = 67/112 (59%), Positives = 82/112 (73%)
Frame = +3 / +2
Query: 270 SCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPD 449
S CY + +G W+ ED L +I HG W ++ K AGL+RCGKSCRLRW+NYLRPD
Sbjct: 65 SSCYSKGHSRGAWTLMEDMILSEYIRIHGSDGWKNIAKRAGLKRCGKSCRLRWLNYLRPD 244
Query: 450 LKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
+KRG + DEEDLII LH +LGNRWS IA +LPGRTDNEIKN W++ + KKL
Sbjct: 245 IKRGNISPDEEDLIIRLHGLLGNRWSLIAGRLPGRTDNEIKNYWHTQMSKKL 400
Score = 62.5 bits (130), Expect = 1e-008
Identities = 34/65 (52%), Positives = 35/65 (53%)
Frame = -3 / -3
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
FLISLSV PGS AI DH PR C S P L SG R*F +LQLFPH
Sbjct: 369 FLISLSVRPGSRPAIKDHRLPRRPCNLIMRSSSSGEMLPRLMSGRR*FNQRNLQLFPHRL 190
Query: 394 SPASL 380
PA L
Sbjct: 189 RPARL 175
Score = 57.9 bits (120), Expect = 2e-007
Identities = 34/112 (30%), Positives = 50/112 (44%)
Frame = -2 / -2
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL VP ILD ++ C RP + + ++Q ++EV + + V +IV P
Sbjct: 400 QLLAHLSVPVILDFVVCSTR*SSCYQRPSIAKKAMQPNNEVLLIRRNVTTFNVGAKIVQP 221
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAAR 270
TLS K F + P+ AM V E IL + P P + +A R
Sbjct: 220 T*SATLSTSFKACSFSDIFPSITAMNSNVFRENHILHKSPSPTAMTF*IARR 65
>gb|DR059561.1|DR059561 RTNIT1_18_A02.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_18_A02_A029 5', mRNA sequence
Length = 737
Score = 171 bits (367), Expect = 2e-041
Identities = 67/116 (57%), Positives = 83/116 (71%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR K+ L +G W+ ED L +I HG G W + K AGL+RC KSCRLRW+N
Sbjct: 23 KMGRSPWPPKEALNRGAWTGMEDTILTEYIRVHGSGGWKDISKRAGLKRCAKSCRLRWLN 202
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
YLRPD+KRG + +EE+LII LH +LGNRWS IA +LPGRTDNEIKN WN+ + KK
Sbjct: 203 YLRPDIKRGNISPEEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTHMSKK 370
Score = 74.8 bits (157), Expect = 2e-012
Identities = 40/116 (34%), Positives = 56/116 (48%)
Frame = -2 / -2
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
LL VP ILD ++ Q C RPP+ + ++Q ++E+FF+ + + +IV P
Sbjct: 370 LLAHMSVPVILDFVVCSTRQSSCYQRPPISKKAMQPNNELFFLRRNVTTFNIGTKIVQPT 191
Query: 422 QPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
Q TL PLK FG+ PA AM V+ E IL P P + R HL
Sbjct: 190 QSATLCTPLKTCSFGDIFPATTAMNSNVLGENRILHACPSPTVKRFFWGPRGSTHL 23
Score = 73.0 bits (153), Expect = 7e-012
Identities = 41/83 (49%), Positives = 43/83 (51%)
Frame = -3 / -3
Query: 601 FFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHL 422
F L+ F FLISLSV PGS AI DH FPR C S P L SG R*F
Sbjct: 369 FLLI*VFQ*FLISLSVRPGSRPAIRDHRFPRRRCNRIMSSSSSGEMLPRLISGRR*FSQR 190
Query: 421 SLQLFPHL*SPASLGTELQQPWP 353
+LQLF HL PA L Q P P
Sbjct: 189 NLQLFAHLLRPALLEISFQPPLP 121
>gb|DT632905.1|DT632905 EST1147836 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFP04 3' end, mRNA sequence
Length = 323
Score = 171 bits (367), Expect = 2e-041
Identities = 65/97 (67%), Positives = 77/97 (79%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
EMGR CC K L++G W+ EED+KL++ I HGH CW +VPKLAGL RCGKSCRLRW N
Sbjct: 33 EMGRQPCCDKVGLKRGPWTAEEDQKLISFILNHGHCCWRAVPKLAGLLRCGKSCRLRWTN 212
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQL 545
YLRPDLKRG ++ EE LII+LH+ LGNRWS+IAA L
Sbjct: 213 YLRPDLKRGLLSESEEQLIIDLHSQLGNRWSKIAAHL 323
Score = 79.9 bits (168), Expect = 6e-014
Identities = 39/102 (38%), Positives = 57/102 (55%)
Frame = -2 / -1
Query: 533 NLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMA 354
NLRPPV E +++++E+ F PS +VWP ++ PP + + SE N PAAMA
Sbjct: 311 NLRPPVTELGMEINNELLFRF**KPSFQVWP*VIRPP*SAAFTTSEQASELRNCTPAAMA 132
Query: 353 MLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAMQNLGAP 228
M+ +E L+LL P Q LV AR+ PHL + + +P
Sbjct: 131 MVENERNELLVLLGSPWSSLQSHLVTARLSPHLRRLIDSNSP 6
Score = 58.3 bits (121), Expect(2) = 1e-008
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = -3 / -2
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
+P RSG +*F+HL+LQL PHL PAS GT QQ WP
Sbjct: 241 SPRFRSGRK*FVHLNLQLLPHLSRPASFGTARQQQWP 131
Score = 46.9 bits (96), Expect = 5e-004
Identities = 28/70 (40%), Positives = 35/70 (50%)
Frame = +1 / +1
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG* 432
LRWG A T * G RR R+S ++ +MA+AAG F +SL + *GG
Sbjct: 31 LRWGDNRAVTRWD*REDHGLPRRTRSSFLSFSTMAIAAGVQFRSSLACSDVVKAAD*GGR 210
Query: 433 TI*GQTSREG 462
GQT EG
Sbjct: 211 ITYGQT*NEG 240
Score = 43.7 bits (89), Expect = 0.005
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2 / +2
Query: 254 *DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDK 433
*DG +L Q E+ + GG E H H++ WP LL S+ RW +++ +L +VD+
Sbjct: 32 *DGATTVL*QGGTEERTMDCRGGPEAHFFHSQPWPLLLACSSEARWPAQMW*KLQIKVDE 211
Query: 434 L 436
L
Sbjct: 212 L 214
Score = 35.9 bits (72), Expect = 1.0
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = -1 / -3
Query: 450 GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSK 271
GLA + ST + + QR E +SS+GH * S PP+ + S C S
Sbjct: 228 GLAVSNSSTLICSFYHI*AGQRASELHASSNGHG*E*KK*ASGPPRQSMVLSSVPPCHST 49
Query: 270 NASPSQR 250
+PSQ+
Sbjct: 48 VVAPSQK 28
Score = 22.1 bits (42), Expect(2) = 1e-008
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3 / -2
Query: 541 CAAI*DHLFP 512
CAAI DHL P
Sbjct: 319 CAAILDHLLP 290
>gb|BG319376.1|BG319376 NXPV_027_C05_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_027_C05 5' similar to Arabidopsis
thaliana sequence At1g63910 putative MYB family
transcription factor see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 296
Score = 170 bits (366), Expect = 3e-041
Identities = 60/92 (65%), Positives = 77/92 (83%)
Frame = +3 / +3
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
+ MGRH CC +QK+++GLWSP+EDEKL+N+ITK+G+GCWS VP+ +GLQRCGKSCRLRWI
Sbjct: 6 IAMGRHLCCNQQKVKRGLWSPDEDEKLINYITKYGYGCWSEVPEKSGLQRCGKSCRLRWI 185
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWS 527
NYLRPD+ G F+ +EE LII LH + N W+
Sbjct: 186 NYLRPDIXXGNFSPNEEKLIIHLHTMXXNXWA 281
Score = 67.0 bits (140), Expect = 4e-010
Identities = 37/91 (40%), Positives = 48/91 (52%)
Frame = -2 / -1
Query: 524 PPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLC 345
P V SVQ+DD++ F+ E S ++ QI+ P LS LK N P A+ +L
Sbjct: 278 PXVXXHSVQMDDKLLFIWTEITSXDIRSQIIDPS*SAALSTTLKT*FLRNFTPTAITILG 99
Query: 344 YVIHEFLILLRGPEPLSQLLLVAARMPPHLN 252
YVI E LIL+ P P LLVAA + H N
Sbjct: 98 YVIDELLILIW*P*PTFHFLLVAA*VASHCN 6
Score = 50.6 bits (104), Expect = 4e-005
Identities = 29/69 (42%), Positives = 33/69 (47%)
Frame = -3 / -2
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL 281
P L SGL+* IH +LQLFP * P GT LQQP P VM FC
Sbjct: 214 PXLISGLK*LIHRNLQLFPQR*RPDFSGTSLQQP*PYLVM*LMSFSSSSGDHSPRFTFCW 35
Query: 280 *QQECLPIS 254
Q + PI+
Sbjct: 34 LQHKWRPIA 8
Score = 49.6 bits (102), Expect = 7e-005
Identities = 31/71 (43%), Positives = 35/71 (49%)
Frame = +1 / +1
Query: 247 IALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*G 426
+ L+W AATSR * G G RMR+S IT* SM MA G F + F ER
Sbjct: 1 LILQWDATYAATSRK*NVGYGHQMRMRSSSIT*PSMVMAVGVKFLRNQVFNVVERAADYD 180
Query: 427 G*TI*GQTSRE 459
G I* S E
Sbjct: 181 GSII*DLISXE 213
Score = 49.2 bits (101), Expect = 1e-004
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = +2 / +2
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
+G +L AE+E A+V G*E H+ HN+ W WLLE S +S + KEL +D+L
Sbjct: 11 NGTPLMLQPAESETWAMVTR*G*EAHQLHNQVWLWLLE*SS*EIRSSTLWKELQITMDQL 190
Query: 437 SE 442
E
Sbjct: 191 FE 196
Score = 35.9 bits (72), Expect = 1.0
Identities = 26/69 (37%), Positives = 32/69 (46%)
Frame = -1 / -3
Query: 459 LS*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASAC 280
L * S++ S +SF E E S+SH H LC+ * SHP T A S SA
Sbjct: 213 LX*YQVSNN*SIVICSSFHNVEDLISQELHSNSHNHTWLCN**ASHPHLVTIAHVSLSAG 34
Query: 279 SSKNASPSQ 253
S + P Q
Sbjct: 33 CSISGVPLQ 7
>gb|BX678005.1|BX678005 BX678005 RN Pinus pinaster cDNA clone RN55A12, mRNA sequence
Length = 423
Score = 170 bits (365), Expect = 4e-041
Identities = 63/90 (70%), Positives = 75/90 (83%)
Frame = +3 / +3
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L+KG W+PEED+KL+++I HGHG W ++PK AGL RCGKSCRLRW NYLRPD+KRG F+
Sbjct: 153 LKKGPWTPEEDQKLIDYIQSHGHGSWRALPKRAGLLRCGKSCRLRWTNYLRPDIKRGQFS 332
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTD 560
+EE IIELHAVLGN+WS IA LPGRTD
Sbjct: 333 YEEEQTIIELHAVLGNKWSTIAGHLPGRTD 422
Score = 95.9 bits (203), Expect = 9e-019
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = -3 / -3
Query: 559 SVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASL 380
SVLPG C AI DHLFPRTA S+ N P SGL+* +HLSLQLFPHL SPA L
Sbjct: 421 SVLPGRCPAIVDHLFPRTAWSSIIVCSSSYENCPRFISGLK*LVHLSLQLFPHLKSPARL 242
Query: 379 GTELQQPWPCFVM 341
G Q PWP M
Sbjct: 241 GRARQLPWPWLCM 203
Score = 69.8 bits (146), Expect = 6e-011
Identities = 34/90 (37%), Positives = 50/90 (55%)
Frame = -2 / -2
Query: 560 ISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEF 381
+SPP Q+ RP V ++S++ + + F++ + + + IV P QP T S +P
Sbjct: 422 VSPPRQMPSYSRPLVSKNSMEFNYSLLFLI*KLSTFYIRS*IVGPSQPATFSTSQEPCSL 243
Query: 380 GNRAPAAMAMLCYVIHEFLILLRGPEPLSQ 291
PA MAM YVI++ LILLR P PL Q
Sbjct: 242 RKGTPATMAMALYVIYQLLILLRCPWPLLQ 153
Score = 43.2 bits (88), Expect = 0.006
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +1 / +1
Query: 292 *ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI* 441
* RG G LRR+++ *IT ++MAM AG F + G E+V G* G TI*
Sbjct: 154 *RRGHGHLRRIKS**ITYKAMAMVAGVPFLSEQGS*DVEKVAG*DGPTI* 303
Score = 41.8 bits (85), Expect = 0.016
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +2 / +2
Query: 290 AEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
AE+GA+ *GG + H K WPW L S A ++ K+L AE+D+L
Sbjct: 152 AEEGAMDT*GGSKADRLHTKPWPW*LACPS*ASRALEMWKKLQAEMDQL 298
Score = 38.2 bits (77), Expect = 0.21
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = -1 / -1
Query: 438 DSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSA 289
+S S SA N F A E +S HGH +C+ PPQ + AP SA
Sbjct: 300 NSWSISACNFFHISRALLA*EGHASYHGHGFVCNLSAFDPPQVSMAPSSA 151
>gb|CN852309.1|CN852309 Pi148-1 Salicylate-treated slash pine seedlings Pinus elliottii
cDNA, mRNA sequence
Length = 270
Score = 168 bits (361), Expect = 1e-040
Identities = 63/88 (71%), Positives = 75/88 (85%)
Frame = +3 / +1
Query: 339 HITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGN 518
HI HG G W S+PK AGL RCGKSCRLRWINYLRPDLKRG+F ++E++LII+LH+ +GN
Sbjct: 7 HIRAHGEGGWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSFVGN 186
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
+WS IA +LPGRTDNEIKN WN+ IKKK
Sbjct: 187 KWSLIAGRLPGRTDNEIKNYWNTHIKKK 270
Score = 88.1 bits (186), Expect = 2e-016
Identities = 45/83 (54%), Positives = 47/83 (56%)
Frame = -3 / -2
Query: 601 FFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHL 422
FFLM F F ISLSV PG+ AI DHL P S P RSG R*FIH
Sbjct: 269 FFLMCVFQ*FFISLSVRPGNLPAIKDHLLPTKEWSLMMSSSSSSVKLPRFRSGRR*FIHR 90
Query: 421 SLQLFPHL*SPASLGTELQQPWP 353
SLQL PHL SPA+LG E Q P P
Sbjct: 89 SLQLLPHLSSPAALGRERQPPSP 21
Score = 73.9 bits (155), Expect = 4e-012
Identities = 31/81 (38%), Positives = 45/81 (55%)
Frame = -2 / -1
Query: 593 DARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPT 414
D VP +L L++ P Q CN RP V + V+ DDE+ F E +L++ Q++YP Q
Sbjct: 261 DVCVPVVLYLVVRPSGQSPCN*RPLVANEGVEFDDELVFFFREASTLQIGTQVIYPSQSA 82
Query: 413 TLSAPLKPSEFGNRAPAAMAM 351
L+A +P G R PA A+
Sbjct: 81 ALAASQQPCGLGKRTPAPFAV 19
Score = 28.6 bits (56), Expect(2) = 3.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVV NC AR D D+E +E HQ++
Sbjct: 183 QQVVFNCREIARTDGQRDKELLEHTHQKK 269
Score = 23.1 bits (44), Expect(2) = 3.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +3
Query: 365 LELCSQTRWASKVRKEL*AEVDKL 436
L SQ R A+++R+EL +DKL
Sbjct: 33 LAFSSQGRRAAEMRQELQTAMDKL 104
>gb|DR101609.1|DR101609 STRR1_74_C02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_C02_A033 5', mRNA sequence
Length = 741
Score = 167 bits (359), Expect = 3e-040
Identities = 66/88 (75%), Positives = 74/88 (84%)
Frame = +3 / +3
Query: 381 KLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTD 560
K AGL RCGKSC LRWINYLRPDLKRG F ++E++LII+LHAVLGN+WS IA +L GRTD
Sbjct: 33 KAAGLLRCGKSCLLRWINYLRPDLKRGGFTEEEDELIIKLHAVLGNKWSLIAGRLAGRTD 212
Query: 561 NEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
NEIKN WNS IKKKL KG+DP TH PL
Sbjct: 213 NEIKNYWNSHIKKKLLSKGLDPKTHCPL 296
Score = 106 bits (226), Expect = 6e-022
Identities = 51/87 (58%), Positives = 55/87 (63%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G WVLGS P +FFLM F F ISLSV P + AI DHLFPRTAC S
Sbjct: 292 GQWVLGSSPLLSNFFLM*LFQ*FFISLSVRPANLPAIRDHLFPRTACNLMISSSSSSVKP 113
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASL 380
P LRSG R*FIH S QLFPHL +PA+L
Sbjct: 112 PRLRSGRR*FIHRSKQLFPHLSNPAAL 32
Score = 79.4 bits (167), Expect = 8e-014
Identities = 36/94 (38%), Positives = 53/94 (56%)
Frame = -2 / -2
Query: 659 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 480
V+ L++ VG+G+ + Q LLD VP +L L++S P Q CN RP V ++ + DD
Sbjct: 311 VVGLAEGTVGLGVESLA*QFLLDVTVPVVLYLVVSSPCQSPCNKRPLVSKNCM*FDD*FV 132
Query: 479 FVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFG 378
GE +LE+ Q+VYP + LSA +P G
Sbjct: 131 LFFGEASTLEIRTQVVYPSEQAALSASQQPCGLG 30
Score = 29.0 bits (57), Expect(2) = 3.9
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHP 634
+QVVS C R +* D+E +E HQEE + Q P
Sbjct: 167 KQVVSYCREIGRAN*QRDKELLEQSHQEEIAKQGTRPQDP 286
Score = 22.1 bits (42), Expect(2) = 3.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 380 QTRWASKVRKEL*AEVDKL 436
Q R +++RKEL A +DKL
Sbjct: 32 QGRRVAEMRKELLAPMDKL 88
>gb|CF390133.1|CF390133 RTDR2_12_C07.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_12_C07_A021 5', mRNA
sequence
Length = 712
Score = 96.8 bits (205), Expect(2) = 3e-040
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +3 / +1
Query: 504 AVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTE 650
AV RWS+IAAQLPGRTDNEIKN WN+ IKKKLRQ GIDP THKPLT+
Sbjct: 523 AVFHTRWSRIAAQLPGRTDNEIKNYWNTRIKKKLRQMGIDPVTHKPLTQ 669
Score = 90.4 bits (191), Expect(2) = 3e-040
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
AGL RCGKSCRLRW NYLRPDLKRG ++ EE LII+LHA +GNR+
Sbjct: 300 AGLLRCGKSCRLRWTNYLRPDLKRGLLSESEEKLIIDLHAAIGNRY 437
Score = 70.7 bits (148), Expect(2) = 1e-018
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = -3 / -3
Query: 646 VSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTA 503
V GLWV GS+P SFFL+ F FLISLSVLPG+CAAI DHL +TA
Sbjct: 665 VRGLWVTGSIPIWRSFFLILVFQ*FLISLSVLPGNCAAIRDHLVWKTA 522
Score = 59.3 bits (123), Expect(2) = 2e-011
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = -2 / -2
Query: 656 ISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDS 504
+ L + LVG I++ L Q LLD RVP ILDL+IS PWQLR + PP E+S
Sbjct: 675 LHLGERLVGHRIDSHLAQFLLDPRVPVILDLVISSPWQLRSDS*PPGVENS 523
Score = 43.7 bits (89), Expect(2) = 1e-018
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -3 / -1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
+LFP AC N P +SG +*F+ +LQL PHL PA
Sbjct: 436 YLFPMAACRSMMSFSSDSDNNPRFKSGRK*FVQRNLQLLPHLSRPA 299
Score = 42.3 bits (86), Expect = 0.012
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +1 / +2
Query: 538 RSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
R+CQG LI RSRI GTR SRR+ R I PTS
Sbjct: 557 RNCQGELITRSRITGTRGSRRNCARWESIL*PTS 658
Score = 37.7 bits (76), Expect = 0.28
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2 / +3
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY 646
QVV+N A ARE+** DQE +E QEE + + S PQA++
Sbjct: 537 QVVTNRCAIAREN**RDQELLEHEDQEETAPDGNRSCDPQASH 665
Score = 30.9 bits (61), Expect(2) = 2e-011
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -2 / -3
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
P+P S+ ++DE+ + +L++ Q++ P Q TTL+
Sbjct: 434 PIPYGSM*INDELLL*FRQ*STLQIRAQVICPTQSTTLA 318
>gb|DR015783.1|DR015783 STRS1_5_D02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_D02_A034 5', mRNA sequence
Length = 547
Score = 166 bits (357), Expect = 5e-040
Identities = 57/111 (51%), Positives = 87/111 (78%)
Frame = +3 / +2
Query: 279 YKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKR 458
+++ L++G W+ ED+ L+ +I HG G W +P+ AGL+R GKSCRLRW+NYLRPD+KR
Sbjct: 203 HEEHLKRGAWTASEDKILIEYIKTHGTGQWRGLPRKAGLERSGKSCRLRWLNYLRPDIKR 382
Query: 459 GAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
G + +E++L++ LH +LGNRW+ IA +LPGRTDNE+KN WN+ + K++++
Sbjct: 383 GNISPEEDELLVRLHRLLGNRWTLIAGRLPGRTDNEVKNYWNTQLSKRVQR 535
Score = 61.6 bits (128), Expect = 2e-008
Identities = 38/81 (46%), Positives = 40/81 (49%)
Frame = -3 / -2
Query: 583 FHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFP 404
F F SLSV PGS AI HL PR C S P L SG R*F +LQLFP
Sbjct: 507 FQ*FFTSLSVRPGSRPAINVHLLPRRRCNLTRSSSSSGEIFPRLISGRR*FNQRNLQLFP 328
Query: 403 HL*SPASLGTELQQPWPCFVM 341
L PA LG L P P +M
Sbjct: 327 LLSRPAFLGRPLH*PVP*VLM 265
>gb|CF391868.1|CF391868 RTDR3_10_B04.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_B04_A022 5', mRNA
sequence
Length = 748
Score = 166 bits (356), Expect = 7e-040
Identities = 64/109 (58%), Positives = 83/109 (76%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L +G W+PEED L +I +G G WS++P+ AGL R GKSCRLRW+N+LRP++KRG +
Sbjct: 98 LHRGSWTPEEDRILKTYIEANGVGRWSTLPQNAGLMRRGKSCRLRWMNHLRPNVKRGHIS 277
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
DEE+LII LH +LGNRWS IA ++PGRTDNE+KN WN+ + KKL G
Sbjct: 278 ADEEELIIRLHNLLGNRWSLIAGRVPGRTDNEVKNYWNTRLSKKLGSTG 424
Score = 51.9 bits (107), Expect = 1e-005
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL +P +L L++ W + P V + ++ +++FF+ + +W ++V+P
Sbjct: 412 QLLAQTSIPVVLYLVVCSSWHSSGDQ*PSVTQQIMESYNKLFFIC*NVTTFNIWAEMVHP 233
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
Q TLS + G PA+ + YV
Sbjct: 232 TQSATLSTSHQTCILGQSTPASHTISFYV 146
Score = 40.0 bits (81), Expect(2) = 4e-007
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -3 / -2
Query: 616 PFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
P SF L F F SLSVLPG+ AI DHL P
Sbjct: 423 PVLPSFLLKRVFQ*FFTSLSVLPGTLPAINDHLLP 319
Score = 35.4 bits (71), Expect(2) = 4e-007
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = -3 / -2
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P L G R FI +LQLFP PA G LQ+P P
Sbjct: 267 PRLTFGRRWFIQRNLQLFPRRIRPAFWGRVLQRPTP 160
>gb|DR069928.1|DR069928 RTDK1_10_F06.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_10_F06_A029 3', mRNA sequence
Length = 794
Score = 166 bits (356), Expect = 7e-040
Identities = 64/109 (58%), Positives = 83/109 (76%)
Frame = +3 / -3
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L +G W+PEED L +I +G G WS++P+ AGL R GKSCRLRW+N+LRP++KRG +
Sbjct: 678 LHRGSWTPEEDRILKTYIEANGVGRWSTLPQNAGLMRRGKSCRLRWMNHLRPNVKRGHIS 499
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
DEE+LII LH +LGNRWS IA ++PGRTDNE+KN WN+ + KKL G
Sbjct: 498 ADEEELIIRLHNLLGNRWSLIAGRVPGRTDNEVKNYWNTRLSKKLGSTG 352
Score = 51.9 bits (107), Expect = 1e-005
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = -2 / +1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL +P +L L++ W + P V + ++ +++FF+ + +W ++V+P
Sbjct: 364 QLLAQTSIPVVLYLVVCSSWHSSGDQ*PSVTQQIMESYNKLFFIC*NVTTFNIWAEMVHP 543
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
Q TLS + G PA+ + YV
Sbjct: 544 TQSATLSTSHQTCILGQSTPASHTISFYV 630
Score = 40.0 bits (81), Expect(2) = 4e-007
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -3 / +2
Query: 616 PFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
P SF L F F SLSVLPG+ AI DHL P
Sbjct: 353 PVLPSFLLKRVFQ*FFTSLSVLPGTLPAINDHLLP 457
Score = 35.4 bits (71), Expect(2) = 4e-007
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = -3 / +2
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P L G R FI +LQLFP PA G LQ+P P
Sbjct: 509 PRLTFGRRWFIQRNLQLFPRRIRPAFWGRVLQRPTP 616
>gb|DR072123.1|DR072123 RTDK1_24_F01.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_24_F01_A029 3', mRNA sequence
Length = 741
Score = 166 bits (356), Expect = 7e-040
Identities = 64/109 (58%), Positives = 83/109 (76%)
Frame = +3 / -1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L +G W+PEED L +I +G G WS++P+ AGL R GKSCRLRW+N+LRP++KRG +
Sbjct: 624 LHRGSWTPEEDRILKTYIEANGVGRWSTLPQNAGLMRRGKSCRLRWMNHLRPNVKRGHIS 445
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
DEE+LII LH +LGNRWS IA ++PGRTDNE+KN WN+ + KKL G
Sbjct: 444 ADEEELIIRLHNLLGNRWSLIAGRVPGRTDNEVKNYWNTRLSKKLGSTG 298
Score = 51.9 bits (107), Expect = 1e-005
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = -2 / +1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL +P +L L++ W + P V + ++ +++FF+ + +W ++V+P
Sbjct: 310 QLLAQTSIPVVLYLVVCSSWHSSGDQ*PSVTQQIMESYNKLFFIC*NVTTFNIWAEMVHP 489
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
Q TLS + G PA+ + YV
Sbjct: 490 TQSATLSTSHQTCILGQSTPASHTISFYV 576
Score = 40.0 bits (81), Expect(2) = 4e-007
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -3 / +2
Query: 616 PFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
P SF L F F SLSVLPG+ AI DHL P
Sbjct: 299 PVLPSFLLKRVFQ*FFTSLSVLPGTLPAINDHLLP 403
Score = 35.4 bits (71), Expect(2) = 4e-007
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = -3 / +2
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P L G R FI +LQLFP PA G LQ+P P
Sbjct: 455 PRLTFGRRWFIQRNLQLFPRRIRPAFWGRVLQRPTP 562
>gb|DR094442.1|DR094442 STRR1_14_D03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_14_D03_A033 5', mRNA sequence
Length = 887
Score = 166 bits (356), Expect = 7e-040
Identities = 64/109 (58%), Positives = 83/109 (76%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L +G W+PEED L +I +G G WS++P+ AGL R GKSCRLRW+N+LRP++KRG +
Sbjct: 118 LHRGSWTPEEDRILKTYIEANGVGRWSTLPQNAGLMRRGKSCRLRWMNHLRPNVKRGHIS 297
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
DEE+LII LH +LGNRWS IA ++PGRTDNE+KN WN+ + KKL G
Sbjct: 298 ADEEELIIRLHNLLGNRWSLIAGRVPGRTDNEVKNYWNTRLSKKLGSTG 444
Score = 51.9 bits (107), Expect = 1e-005
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL +P +L L++ W + P V + ++ +++FF+ + +W ++V+P
Sbjct: 432 QLLAQTSIPVVLYLVVCSSWHSSGDQ*PSVTQQIMESYNKLFFIC*NVTTFNIWAEMVHP 253
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
Q TLS + G PA+ + YV
Sbjct: 252 TQSATLSTSHQTCILGQSTPASHTISFYV 166
Score = 40.0 bits (81), Expect(2) = 4e-007
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -3 / -1
Query: 616 PFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
P SF L F F SLSVLPG+ AI DHL P
Sbjct: 443 PVLPSFLLKRVFQ*FFTSLSVLPGTLPAINDHLLP 339
Score = 35.4 bits (71), Expect(2) = 4e-007
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = -3 / -1
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P L G R FI +LQLFP PA G LQ+P P
Sbjct: 287 PRLTFGRRWFIQRNLQLFPRRIRPAFWGRVLQRPTP 180
>gb|CF401126.1|CF401126 RTWW1_10_H02.b1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_10_H02_A015 3', mRNA sequence
Length = 620
Score = 165 bits (355), Expect = 9e-040
Identities = 60/87 (68%), Positives = 77/87 (88%)
Frame = +3 / -2
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDN 563
+ GL RCGKSCRLRWINYLRPDLKRG F+++E++LII+LH++LGN+WS IA +LPGRTDN
Sbjct: 481 IVGLMRCGKSCRLRWINYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDN 302
Query: 564 EIKNLWNSCIKKKLRQKGIDPNTHKPL 644
EIKN WN+ IK+KL +G+DP +H+PL
Sbjct: 301 EIKNYWNTHIKRKLLNRGLDPQSHRPL 221
Score = 85.8 bits (181), Expect = 9e-016
Identities = 37/99 (37%), Positives = 56/99 (56%)
Frame = -2 / +2
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G G AV+ L++ +G+G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 179 GQRGAGRVAVVRLAEGAMGLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAEQ 358
Query: 506 SVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
V+ DDE F E +L++ Q+VYP +P L A +P
Sbjct: 359 GVEFDDEFVFFF*EVSTLQIRTQVVYPSEPAALPAAHQP 475
Score = 76.2 bits (160), Expect = 7e-013
Identities = 41/84 (48%), Positives = 43/84 (51%)
Frame = -3 / +3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G W GS P +F LM F F ISLSV PG+ AI DHL P S
Sbjct: 225 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLMMSSSSSSEKF 404
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SP 389
P RSG R*FIH SLQLFP SP
Sbjct: 405 PRFRSGRR*FIHRSLQLFPQRISP 476
>gb|DR055413.1|DR055413 RTCA1_23_C03.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_23_C03_A029 5', mRNA sequence
Length = 535
Score = 138 bits (295), Expect(2) = 1e-039
Identities = 52/86 (60%), Positives = 66/86 (76%)
Frame = +3 / +1
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
+GL+R GKSCRLRW NYLR D+K G + +EE+L+I LH +LGNRWS IA +LPGRTDNE
Sbjct: 202 SGLKRSGKSCRLRWFNYLRSDIKHGNISPEEEELLIRLHRLLGNRWSLIAGRLPGRTDNE 381
Query: 567 IKNLWNSCIKKKLRQKGIDPNTHKPL 644
IKN WN+ ++KK+ + P T KPL
Sbjct: 382 IKNYWNTHLRKKIETGELKPKTQKPL 459
Score = 51.0 bits (105), Expect = 3e-005
Identities = 31/66 (46%), Positives = 32/66 (48%)
Frame = -3 / -3
Query: 601 FFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHL 422
FFL F F ISLSVLPGS AI D PR C S P L S R*
Sbjct: 416 FFLK*VFQ*FFISLSVLPGSRPAINDQRLPRRRCNLMRSSSSSGEMFPCLISERR*LNQR 237
Query: 421 SLQLFP 404
+LQLFP
Sbjct: 236 NLQLFP 219
Score = 46.9 bits (96), Expect(2) = 1e-039
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
+G WS EED L HI HG G W+S+PK AG
Sbjct: 2 RGSWSAEEDTILSEHIKTHGVGRWTSLPKKAG 97
>gb|CO173370.1|CO173370 NDL1_35_F03.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_35_F03_A029 5', mRNA sequence
Length = 745
Score = 164 bits (353), Expect = 2e-039
Identities = 65/86 (75%), Positives = 73/86 (84%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL CGKSCRLRWINYLRPDLKRG F ++E++LII+LHAVLGN+WS IA +L GRTDNE
Sbjct: 5 AGLL*CGKSCRLRWINYLRPDLKRGGFTEEEDELIIKLHAVLGNKWSLIAGRLAGRTDNE 184
Query: 567 IKNLWNSCIKKKLRQKGIDPNTHKPL 644
IKN WNS IKKKL KG+DP TH PL
Sbjct: 185 IKNYWNSHIKKKLLSKGLDPKTHCPL 262
Score = 104 bits (221), Expect = 3e-021
Identities = 50/86 (58%), Positives = 54/86 (62%)
Frame = -3 / -2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G WVLGS P +FFLM F F ISLSV P + AI DHLFPRTAC S
Sbjct: 258 GQWVLGSSPLLSNFFLM*LFQ*FFISLSVRPANLPAIRDHLFPRTACNLMISSSSSSVKP 79
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPAS 383
P LRSG R*FIH SLQLFPH +PA+
Sbjct: 78 PRLRSGRR*FIHRSLQLFPHHSNPAA 1
Score = 81.7 bits (172), Expect = 2e-014
Identities = 36/90 (40%), Positives = 53/90 (58%)
Frame = -2 / -1
Query: 659 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 480
V+ L++ VG+G+ + Q LLD VP +L L++S P Q CN RP V ++ + DD
Sbjct: 277 VVGLAEGTVGLGVESLA*QFLLDVTVPVVLYLVVSSPCQSPCNKRPLVSKNCM*FDD*FV 98
Query: 479 FVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
GE +LE+ Q+VYP +P LSA +P
Sbjct: 97 LFFGEASTLEIRTQVVYPSEPAALSASQQP 8
>gb|DR386238.1|DR386238 RTHG1_13_G03.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_13_G03_A029 5', mRNA sequence
Length = 600
Score = 163 bits (351), Expect = 3e-039
Identities = 63/109 (57%), Positives = 83/109 (76%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L +G W+PEED L +I +G G WS++P+ AGL R GKSCRLRW+N+LRP++KRG +
Sbjct: 116 LHRGSWTPEEDRILKTYIEANGVGRWSTLPQNAGLMRRGKSCRLRWMNHLRPNVKRGHIS 295
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
DEE+LII LH +LGNRWS IA ++PGRTD+E+KN WN+ + KKL G
Sbjct: 296 ADEEELIIRLHNLLGNRWSLIAGRVPGRTDDEVKNYWNTRLSKKLGSTG 442
Score = 51.9 bits (107), Expect = 1e-005
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL +P +L L++ W + P V + ++ +++FF+ + +W ++V+P
Sbjct: 430 QLLAQTSIPVVLYLVVCSSWHSSGDQ*PSVTQQIMESYNKLFFIC*NVTTFNIWAEMVHP 251
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
Q TLS + G PA+ + YV
Sbjct: 250 TQSATLSTSHQTCILGQSTPASHTISFYV 164
Score = 37.3 bits (75), Expect(2) = 3e-006
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -3 / -1
Query: 616 PFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
P SF L F F S SVLPG+ AI DHL P
Sbjct: 441 PVLPSFLLKRVFQ*FFTSSSVLPGTLPAINDHLLP 337
Score = 35.4 bits (71), Expect(2) = 3e-006
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = -3 / -1
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P L G R FI +LQLFP PA G LQ+P P
Sbjct: 285 PRLTFGRRWFIQRNLQLFPRRIRPAFWGRVLQRPTP 178
>gb|DR111182.1|DR111182 RTS1_16_A02.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_16_A02_A029 3', mRNA sequence
Length = 685
Score = 161 bits (347), Expect = 1e-038
Identities = 66/106 (62%), Positives = 76/106 (71%)
Frame = +3 / -2
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
K RKG W+ +ED +L+ +I+ HG G W + K AGL R GKSCRLRWINYLRPDLKR
Sbjct: 375 KPRKGPWTVQEDMQLIRYISSHGEGRWPFLAKAAGLNRTGKSCRLRWINYLRPDLKRSKI 196
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
EE LII+LH GNRWS IA LPGRTDNEIKN W + IKK+L
Sbjct: 195 TPQEERLIIKLHRRWGNRWSSIAQNLPGRTDNEIKNHWRTRIKKRL 58
Score = 89.0 bits (188), Expect = 1e-016
Identities = 37/106 (34%), Positives = 61/106 (57%)
Frame = -2 / +1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
Q LD P ILD ++ P Q+ N RPPVP ++ +D+ FF+ + +LE+ ++V P
Sbjct: 58 QSFLDTSSPVILDFVVRSPRQILRNARPPVPPTAM*FNDQTFFLRSDLAALEIRSEVVDP 237
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQL 288
P+PT L+ + S FG + P + +M Y+ ++ + L P PL +L
Sbjct: 238 PKPTALACSV*ASCFGKKGPTSFSMRTYIPNKLHVFLNSPGPLPRL 375
Score = 48.3 bits (99), Expect(2) = 5e-013
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = -3 / +2
Query: 628 LGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 500
L + F S FL+ FLISLSVLPG A+ DHLFP+ C
Sbjct: 35 LSACRFRFSLFLIRVLQ*FLISLSVLPGKFCAMLDHLFPQRRC 163
Score = 47.3 bits (97), Expect(2) = 5e-013
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = -3 / +2
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
LRSG R* IHLSLQL P L PA+L + Q+P PC
Sbjct: 209 LRSGRR*LIHLSLQLLPVLFRPAALARKGQRPSPC 313
Score = 29.9 bits (59), Expect(2) = 0.018
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2 / -1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAE 613
EQVV +C+ A E+ +QES+E +QE+ E+E
Sbjct: 148 EQVV*HCAEFAGENGQRNQESLENSYQEKTESE 50
Score = 29.5 bits (58), Expect(2) = 0.018
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2 / -1
Query: 350 AWPWLLELCSQTRWASKVRKEL*AEVDKL 436
AW L L Q+ W + R+EL*A VD+L
Sbjct: 313 AWRRTLALSCQSSWPKQNRQEL*A*VDQL 227
>gb|BQ654804.1|BQ654804 NXRV085_H06_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV085_H06 5' similar to Arabidopsis thaliana
sequence At4g01680 putative transcription factor see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 559
Score = 161 bits (346), Expect = 2e-038
Identities = 60/77 (77%), Positives = 65/77 (84%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGRHSCCYKQKLRKGLWSPE DEKL+ HITK+GHGCWS+VPK AGLQRCGK CRLRWINY
Sbjct: 328 MGRHSCCYKQKLRKGLWSPEXDEKLVRHITKYGHGCWSAVPKQAGLQRCGKXCRLRWINY 507
Query: 438 LRPDLKRGAFAQDEEDL 488
L P L R F+ E+L
Sbjct: 508 LIPXLNRXTFSPXXENL 558
Score = 68.4 bits (143), Expect = 2e-010
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = -2 / -2
Query: 488 EVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRG 309
E+F EC ++ Q+V PP+P L A L+ S + PA+MA+ + H+ LI R
Sbjct: 558 EIFXXRRECXXIQXXYQVVDPPKPAXLPATLEASLLWHCTPASMAVFGNMAHQLLIXFRR 379
Query: 308 PEPLSQLLLVAARMPPHLNA 249
P+ L + L VAAR+ PH ++
Sbjct: 378 PQTLPEFLFVAARVAPHYSS 319
Score = 57.4 bits (119), Expect = 3e-007
Identities = 29/66 (43%), Positives = 33/66 (50%)
Frame = -3 / -3
Query: 451 RSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL*QQ 272
R G++* IH SLQ FP PA GT LQ PWP V+ FCL*Q
Sbjct: 521 RXGIK*LIHRSLQXFPQRWRPACFGTALQHPWPYLVIWRTSFSSXSGDHKPFLSFCL*QH 342
Query: 271 ECLPIS 254
E PI+
Sbjct: 341 EWRPIT 324
Score = 43.7 bits (89), Expect = 0.005
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = +2 / +3
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
+G +LLQ E ++G +V *E + + PW+LE ++ W +R+ L A VD+L
Sbjct: 327 NGAPLVLLQTETQEGFVVSGXX*EAGAPYYQIRPWMLECSAKASWPPALREXLQASVDQL 506
>gb|CF393224.1|CF393224 RTDR3_17_B01.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_17_B01_A022 5', mRNA
sequence
Length = 277
Score = 160 bits (343), Expect = 4e-038
Identities = 58/90 (64%), Positives = 71/90 (78%)
Frame = +3 / +3
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 452
CC KG W+ EED++L +I HG GCW S+PK AGL RCGKSCRLRWINYLRPDL
Sbjct: 6 CCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDL 185
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQ 542
KRG F++DE+DLI++LHA+LGN+WS IA +
Sbjct: 186 KRGGFSEDEDDLILKLHALLGNKWSLIAGR 275
Score = 76.2 bits (160), Expect = 7e-013
Identities = 36/61 (59%), Positives = 37/61 (60%)
Frame = -3 / -1
Query: 535 AI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPW 356
AI DHLFPR AC S P RSG R*FIHLSLQLFPH PA+LG E Q P
Sbjct: 268 AIRDHLFPRRACSLRIRSSSSSEKPPRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPS 89
Query: 355 P 353
P
Sbjct: 88 P 86
>gb|CV033497.1|CV033497 RTNACL1_34_H05.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_34_H05_A029 5', mRNA sequence
Length = 724
Score = 160 bits (343), Expect = 4e-038
Identities = 63/107 (58%), Positives = 77/107 (71%)
Frame = +3 / +3
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
RKG W+ EED +L+ + HG G W+ + + +GLQR GKSCRLRW+NYLRPDLKR
Sbjct: 84 RKGPWTVEEDMQLIGIVNLHGEGRWNFLARASGLQRTGKSCRLRWVNYLRPDLKRSKITP 263
Query: 474 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
+EE LIIELH GNRWS+IA LPGRTDNEIKN W + +K KL +
Sbjct: 264 EEERLIIELHRRWGNRWSRIAQSLPGRTDNEIKNFWRTRMKGKLNSE 404
Score = 68.9 bits (144), Expect = 1e-010
Identities = 31/103 (30%), Positives = 54/103 (52%)
Frame = -2 / -3
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
L A P ILD I+ P CN RP + +++ +++ FF + LE+ P+IV PP P
Sbjct: 386 LHASSPEILDFIVRPSR*TLCNTRPSISPTAMEFNNQTFFFRSDLAPLEIRPEIVNPP*P 207
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQL 288
L++ L+ G + PA+ ++ Y ++ +L P L ++
Sbjct: 206 AALTSSLEARCSGEKVPASFSVQIYNTNKLHVLFHSPWTLPRI 78
Score = 45.5 bits (93), Expect(2) = 2e-010
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
SF M +FLISLSVLPG AI DHLFP+
Sbjct: 394 SFPFMRVLQKFLISLSVLPGKLCAIRDHLFPQ 299
Score = 41.4 bits (84), Expect(2) = 2e-010
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -3 / -1
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
LRSG R* HLS QL P L P +L + Q+P PC
Sbjct: 244 LRSGRR*LTHLSRQLLPVLWRPDALARKFQRPSPC 140
>gb|DR089238.1|DR089238 RTAL1_7_A05.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_7_A05_A029 5', mRNA sequence
Length = 664
Score = 160 bits (343), Expect = 4e-038
Identities = 63/107 (58%), Positives = 77/107 (71%)
Frame = +3 / +2
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
RKG W+ EED +L+ + HG G W+ + + +GLQR GKSCRLRW+NYLRPDLKR
Sbjct: 50 RKGPWTVEEDMQLIGIVNLHGEGRWNFLARASGLQRTGKSCRLRWVNYLRPDLKRSKITP 229
Query: 474 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
+EE LIIELH GNRWS+IA LPGRTDNEIKN W + +K KL +
Sbjct: 230 EEERLIIELHRRWGNRWSRIAQSLPGRTDNEIKNFWRTRMKGKLNSE 370
Score = 68.9 bits (144), Expect = 1e-010
Identities = 31/103 (30%), Positives = 54/103 (52%)
Frame = -2 / -1
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
L A P ILD I+ P CN RP + +++ +++ FF + LE+ P+IV PP P
Sbjct: 352 LHASSPEILDFIVRPSR*TLCNTRPSISPTAMEFNNQTFFFRSDLAPLEIRPEIVNPP*P 173
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQL 288
L++ L+ G + PA+ ++ Y ++ +L P L ++
Sbjct: 172 AALTSSLEARCSGEKVPASFSVQIYNTNKLHVLFHSPWTLPRI 44
Score = 45.5 bits (93), Expect(2) = 2e-010
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
SF M +FLISLSVLPG AI DHLFP+
Sbjct: 360 SFPFMRVLQKFLISLSVLPGKLCAIRDHLFPQ 265
Score = 41.4 bits (84), Expect(2) = 2e-010
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -3 / -2
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
LRSG R* HLS QL P L P +L + Q+P PC
Sbjct: 210 LRSGRR*LTHLSRQLLPVLWRPDALARKFQRPSPC 106
>gb|DR384837.1|DR384837 RTHG1_4_H08.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_4_H08_A029 5', mRNA sequence
Length = 784
Score = 160 bits (343), Expect = 4e-038
Identities = 63/107 (58%), Positives = 77/107 (71%)
Frame = +3 / +2
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
RKG W+ EED +L+ + HG G W+ + + +GLQR GKSCRLRW+NYLRPDLKR
Sbjct: 89 RKGPWTVEEDMQLIGIVNLHGEGRWNFLARASGLQRTGKSCRLRWVNYLRPDLKRSKITP 268
Query: 474 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
+EE LIIELH GNRWS+IA LPGRTDNEIKN W + +K KL +
Sbjct: 269 EEERLIIELHRRWGNRWSRIAQSLPGRTDNEIKNFWRTRMKGKLNSE 409
Score = 72.5 bits (152), Expect = 9e-012
Identities = 32/103 (31%), Positives = 55/103 (53%)
Frame = -2 / -1
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
L A P ILD I+ P CN RPP+ +++ +++ FF + LE+ P+IV PP P
Sbjct: 391 LHASSPEILDFIVRPSR*TLCNTRPPISPTAMEFNNQTFFFRSDLAPLEIRPEIVNPP*P 212
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQL 288
L++ L+ G + PA+ ++ Y ++ +L P L ++
Sbjct: 211 AALTSSLEARCSGEKVPASFSVQIYNTNKLHVLFHSPWTLPRI 83
Score = 45.5 bits (93), Expect(2) = 2e-010
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
SF M +FLISLSVLPG AI DHLFP+
Sbjct: 399 SFPFMRVLQKFLISLSVLPGKLCAIRDHLFPQ 304
Score = 41.4 bits (84), Expect(2) = 2e-010
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -3 / -2
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
LRSG R* HLS QL P L P +L + Q+P PC
Sbjct: 249 LRSGRR*LTHLSRQLLPVLWRPDALARKFQRPSPC 145
>gb|CF663690.1|CF663690 RTCNT1_4_C02.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_4_C02_A029 5', mRNA sequence
Length = 673
Score = 159 bits (342), Expect = 6e-038
Identities = 65/106 (61%), Positives = 75/106 (70%)
Frame = +3 / +1
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
K RKG W+ +ED +L+ +I HG G W + K AGL R GKSCRLRWINYLRPDLKR
Sbjct: 304 KTRKGPWTVQEDMQLIRYINSHGEGRWPFLAKAAGLNRTGKSCRLRWINYLRPDLKRSKI 483
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
EE LII+LH GNRWS+IA L GRTDNEIKN W + IKK+L
Sbjct: 484 TPQEERLIIKLHHRWGNRWSRIAQNLSGRTDNEIKNYWRTRIKKRL 621
Score = 83.1 bits (175), Expect = 6e-015
Identities = 35/106 (33%), Positives = 60/106 (56%)
Frame = -2 / -2
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
Q LD P ILD ++ P + N RPPVP ++L+++ FF+ + +LE+W ++V P
Sbjct: 621 QSFLDTGSPVILDFVVRSPR*ILRNARPPVPPTVMELNNQTFFLRSDLAALEIWSEVVDP 442
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQL 288
P+ L++ + FG + PA +M Y+ ++ +LL P L +L
Sbjct: 441 PKSAALTSSV*ARCFGKKGPAPFSMRIYIPNKLHVLLNSPGSLPRL 304
Score = 47.3 bits (97), Expect(2) = 4e-010
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = -3 / -3
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
LRSG R* IHLSLQL P L PA+L + Q+P PC
Sbjct: 470 LRSGRR*LIHLSLQLLPVLFRPAALARKGQRPSPC 366
Score = 38.2 bits (77), Expect(2) = 4e-010
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
+ FL+ FLISLSVLP A+ DHLFP+
Sbjct: 620 NLFLIRVLQ*FLISLSVLPDKFCAMRDHLFPQ 525
>gb|CV034962.1|CV034962 RTNACL1_12_F05.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_12_F05_A029 5', mRNA sequence
Length = 619
Score = 159 bits (342), Expect = 6e-038
Identities = 59/95 (62%), Positives = 73/95 (76%)
Frame = +3 / +2
Query: 240 VLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCR 419
+L C MGR CC KG W+ EED++L +I HG GCW S+PK AGL RCGKSCR
Sbjct: 50 LLLC*TMGRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCR 229
Query: 420 LRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
LRWINYLRPDLKRG F++DE+DLI++LHA+LGN++
Sbjct: 230 LRWINYLRPDLKRGGFSEDEDDLILKLHALLGNKY 334
Score = 68.9 bits (144), Expect = 1e-010
Identities = 32/57 (56%), Positives = 34/57 (59%)
Frame = -3 / -2
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
+LFPR AC S P RSG R*FIHLSLQLFPH PA+LG E Q P P
Sbjct: 333 YLFPRRACSLRIRSSSSSEKPPRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP 163
>gb|CX714163.1|CX714163 RTPQ1_18_D03.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_18_D03_A032 5', mRNA sequence
Length = 393
Score = 159 bits (342), Expect = 6e-038
Identities = 59/95 (62%), Positives = 73/95 (76%)
Frame = +3 / +1
Query: 240 VLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCR 419
+L C MGR CC KG W+ EED++L +I HG GCW S+PK AGL RCGKSCR
Sbjct: 4 LLLC*TMGRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCR 183
Query: 420 LRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
LRWINYLRPDLKRG F++DE+DLI++LHA+LGN++
Sbjct: 184 LRWINYLRPDLKRGGFSEDEDDLILKLHALLGNKY 288
Score = 68.9 bits (144), Expect = 1e-010
Identities = 32/57 (56%), Positives = 34/57 (59%)
Frame = -3 / -2
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
+LFPR AC S P RSG R*FIHLSLQLFPH PA+LG E Q P P
Sbjct: 287 YLFPRRACSLRIRSSSSSEKPPRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP 117
>gb|CO164542.1|CO164542 FLD1_48_E08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_48_E08_A029 5', mRNA sequence
Length = 862
Score = 155 bits (334), Expect = 7e-037
Identities = 59/85 (69%), Positives = 69/85 (81%)
Frame = +3 / +1
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL RCGKSCRLRW NYLRPD+KRG F+ EE II LH +LGNRWS I++ LPGRTDNE
Sbjct: 10 AGLMRCGKSCRLRWTNYLRPDIKRGNFSLKEEQTIIHLHQILGNRWSAISSHLPGRTDNE 189
Query: 567 IKNLWNSCIKKKLRQKGIDPNTHKP 641
IKN+WN+ +KK+L Q G+DP TH P
Sbjct: 190 IKNVWNTHLKKRLLQIGVDPVTHAP 264
Score = 63.8 bits (133), Expect(2) = 1e-014
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 500
G WV GS P C F FH F ISLSVLPG C I DH FPR C
Sbjct: 263 GAWVTGSTPICRRRFFK*VFHTFFISLSVLPGRCEEIADHRFPRI*C 123
Score = 53.3 bits (110), Expect = 6e-006
Identities = 30/81 (37%), Positives = 42/81 (51%)
Frame = -2 / -2
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
VG + L + VP I LII ++ N P VP+D +Q+++ + F+ E P+
Sbjct: 258 VGYWVYPNLQEAFFQMSVPYIFYLIICSSGEV*GNS*PSVPKDLMQMNNSLLFLETEVPT 79
Query: 455 LEVWPQIVYPPQPTTLSAPLK 393
V QIV PPQ TTLS K
Sbjct: 78 FYVRSQIVCPPQATTLSTSHK 16
Score = 37.3 bits (75), Expect(2) = 1e-014
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -3 / -3
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPA 386
P SGLR*F+H QLFPH SPA
Sbjct: 83 PRFMSGLR*FVHRRRQLFPHRISPA 9
>gb|DR101544.1|DR101544 STRR1_74_C02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_C02_A033 3', mRNA sequence
Length = 817
Score = 154 bits (330), Expect = 3e-036
Identities = 60/79 (75%), Positives = 68/79 (86%)
Frame = +3 / +3
Query: 408 KSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNS 587
KSCRLRWINYLRPDLKRG F ++E++LII+LHAVLGN+WS IA +L GRTDNEIKN WNS
Sbjct: 3 KSCRLRWINYLRPDLKRGGFTEEEDELIIKLHAVLGNKWSLIAGRLAGRTDNEIKNYWNS 182
Query: 588 CIKKKLRQKGIDPNTHKPL 644
IKKKL KG+DP TH PL
Sbjct: 183 HIKKKLLSKGLDPKTHCPL 239
Score = 94.5 bits (200), Expect = 2e-018
Identities = 46/78 (58%), Positives = 48/78 (61%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G WVLGS P +FFLM F F ISLSV P + AI DHLFPRTAC S
Sbjct: 235 GQWVLGSSPLLSNFFLM*LFQ*FFISLSVRPANLPAIRDHLFPRTACNLMISSSSSSVKP 56
Query: 460 PLLRSGLR*FIHLSLQLF 407
P LRSG R*FIH SLQLF
Sbjct: 55 PRLRSGRR*FIHRSLQLF 2
Score = 75.8 bits (159), Expect = 1e-012
Identities = 33/84 (39%), Positives = 49/84 (58%)
Frame = -2 / -3
Query: 659 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 480
V+ L++ VG+G+ + Q LLD VP +L L++S P Q CN RP V ++ + DD
Sbjct: 254 VVGLAEGTVGLGVESLA*QFLLDVTVPVVLYLVVSSPCQSPCNKRPLVSKNCM*FDD*FV 75
Query: 479 FVLGECPSLEVWPQIVYPPQPTTL 408
GE +LE+ Q+VYP +P L
Sbjct: 74 LFFGEASTLEIRTQVVYPSEPAAL 3
>gb|CF396536.1|CF396536 RTDS2_22_H07.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_22_H07_A021 5', mRNA sequence
Length = 777
Score = 141 bits (302), Expect(2) = 4e-036
Identities = 57/127 (44%), Positives = 84/127 (66%)
Frame = +3 / +1
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAA 539
G W ++P+ GL+RCGKSCRLRW+NYLRP++K G F+++E+++I L+ +G+RWS IAA
Sbjct: 58 GNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICTLYLSIGSRWSIIAA 237
Query: 540 QLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSDINP 719
QLPGRTDN+IKN WN+ +KKKL K + + + + + +T TS + +I
Sbjct: 238 QLPGRTDNDIKNYWNTRLKKKLLGKTKERQSRRLAGAKEESKDMQSYATPGTSTNPNIYA 417
Query: 720 SSTGPLG 740
P G
Sbjct: 418 PQQQPGG 438
Score = 59.3 bits (123), Expect = 9e-008
Identities = 28/80 (35%), Positives = 39/80 (48%)
Frame = -2 / -1
Query: 632 GVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSL 453
G+ F Q LL VP I D++I P QL N RPP ++ ++V E L
Sbjct: 330 GLAFLGFPQQFLLQPCVPVIFDIVICSPRQLGRNDRPPATNTEIKGTNDVILFF*EPSML 151
Query: 452 EVWPQIVYPPQPTTLSAPLK 393
+WPQ+V P +P L P +
Sbjct: 150 YIWPQVV*PSKPAALPTPFQ 91
Score = 46.9 bits (96), Expect(3) = 6e-015
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = -3 / -2
Query: 622 SMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
S+ F SFF F FLISLSVLPGS AA+ DHL P
Sbjct: 320 SLVFPSSFFFSLVFQ*FLISLSVLPGSWAAMIDHLLP 210
Score = 44.6 bits (91), Expect(3) = 6e-015
Identities = 21/36 (58%), Positives = 22/36 (61%)
Frame = -3 / -2
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQP 359
N P GLR*F HLSLQLFPHL P G +Q P
Sbjct: 164 NPPCFIFGLR*FNHLSLQLFPHLFKPIF*GKAIQLP 57
Score = 32.2 bits (64), Expect(2) = 4e-036
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 306 WSPEEDEKLMNHITKHGHG 362
WSPEED +L +I K+G G
Sbjct: 1 WSPEEDSELKKYIEKYGTG 57
Score = 27.6 bits (54), Expect(3) = 6e-015
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1 / -3
Query: 378 EQSSSSHGHALLCDS*VSHPPQGT 307
+QSS H LC S*V PPQ T
Sbjct: 73 KQSSCLQCHTSLCIS*VQSPPQET 2
>gb|CO173249.1|CO173249 NDL1_35_A08.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_35_A08_A029 3', mRNA sequence
Length = 616
Score = 153 bits (328), Expect = 5e-036
Identities = 56/76 (73%), Positives = 68/76 (89%)
Frame = +3 / +2
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
RCGKSCRLRWINYLRPDLKRG F++DE+DLI+++HA+LGN+WS IA +LPGRTDNEIKN
Sbjct: 2 RCGKSCRLRWINYLRPDLKRGGFSEDEDDLIVKMHALLGNKWSLIAGRLPGRTDNEIKNY 181
Query: 579 WNSCIKKKLRQKGIDP 626
WNS +K+K+ GIDP
Sbjct: 182 WNSHLKRKIINMGIDP 229
Score = 90.9 bits (192), Expect = 3e-017
Identities = 43/75 (57%), Positives = 46/75 (61%)
Frame = -3 / -2
Query: 625 GSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRS 446
GS+P + F EF F ISLSV PG AI DHLFPR+AC S P LRS
Sbjct: 228 GSIPMLIIFLFRCEFQ*FFISLSVRPGKRPAIKDHLFPRSACILTIRSSSSSEKPPRLRS 49
Query: 445 GLR*FIHLSLQLFPH 401
G R*FIHLSLQLFPH
Sbjct: 48 GRR*FIHLSLQLFPH 4
Score = 61.6 bits (128), Expect = 2e-008
Identities = 28/84 (33%), Positives = 42/84 (50%)
Frame = -2 / -1
Query: 650 LSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVL 471
L K G I+ + L RVP + L+I WQ RP + ++ V D+++ FV
Sbjct: 253 LLKRTAGQWIDPHVDNFSLQMRVPVVFYLVICSSWQTPSYQRPLISKECVHFDNKIVFVF 74
Query: 470 GECPSLEVWPQIVYPPQPTTLSAP 399
+ S E+ +I+YP QP T S P
Sbjct: 73 RKTSSFEIRAKIIYPSQPATFSTP 2
>gb|BE520012.1|BE520012 NXCI_028_B03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_028_B03 5' similar to Arabidopsis
thaliana sequence At5g52600 MYB82 (gb|AAF14064.1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 328
Score = 152 bits (327), Expect = 7e-036
Identities = 59/94 (62%), Positives = 70/94 (74%)
Frame = +3 / +3
Query: 321 DEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIEL 500
D +L I HG G W ++ K AGL+RCGKSCR RW+NYLRP+LK G + DEEDLII L
Sbjct: 3 DLRLTQFIEAHGEGRWPALAKNAGLKRCGKSCRFRWVNYLRPNLKHGNISPDEEDLIIRL 182
Query: 501 HAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
H +LGNRWS IA ++PGRTDNEIKN WN+ KK
Sbjct: 183 HKLLGNRWSLIAGRIPGRTDNEIKNYWNTRSNKK 284
Score = 78.0 bits (164), Expect = 2e-013
Identities = 36/86 (41%), Positives = 47/86 (54%)
Frame = -2 / -3
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
L+ VP +LD IIS W N RPPV + ++ D+VFF+ EVWP+I+YP +
Sbjct: 281 LVGTSVPVVLDFIISSTWYAPRN*RPPVSQQFMKSYDKVFFIW*NVTMFEVWPKIIYPTK 102
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCY 342
P TLS L FG PA+ M Y
Sbjct: 101 PATLSTTL*TCIFG*SRPASFTMSFY 24
Score = 64.8 bits (135), Expect = 2e-009
Identities = 38/84 (45%), Positives = 42/84 (50%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+F L F FLISLSVLPG AI DH FP + S P LR G R*F
Sbjct: 286 AFLLERVFQ*FLISLSVLPGMRPAINDHRFPSSL*SLMIRSSSSGEMLPCLRFGRR*FTQ 107
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
+LQLFP PA L Q+P P
Sbjct: 106 RNLQLFPQRFRPAFLARAGQRPSP 35
>gb|CV035967.1|CV035967 RTNACL1_43_E10.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_43_E10_A029 5', mRNA sequence
Length = 862
Score = 150 bits (323), Expect = 2e-035
Identities = 63/104 (60%), Positives = 72/104 (69%)
Frame = +3 / +3
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
RKG W+ EED L +I HG G WS + K AGL+R G+SCRLRW N LRP LK G
Sbjct: 66 RKGPWAVEEDLHLTRYIRLHGEGRWSFLAKAAGLKRTGRSCRLRWFNSLRPGLKHGKITP 245
Query: 474 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
+EE LII LH GNRWS+IA +LPGRTDNEIKN W + IK KL
Sbjct: 246 EEERLIIGLHGRWGNRWSRIARRLPGRTDNEIKNYWRTRIKGKL 377
Score = 72.1 bits (151), Expect = 1e-011
Identities = 36/106 (33%), Positives = 54/106 (50%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
Q LD+ P ILD I+ CN RPPV +++ +++ FF+ + LE P+ V P
Sbjct: 377 QFSLDSSSPVILDFIVRSSG*SPCNARPPVAPTAMKSNNQTFFLRSDLAVLETRPEGVKP 198
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQL 288
P P S+ + S FG +APA M Y+ + +L P L +L
Sbjct: 197 P*PAASSSSFQSSCFGEKAPAPFPM*AYIPSKMQVLFDSPWTLPRL 60
Score = 48.3 bits (99), Expect(2) = 4e-010
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = -3 / -1
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
P LR G R HLSLQL P L SPA+L +LQ+P PC
Sbjct: 232 PCLRPGRRELNHLSLQLLPVLFSPAALARKLQRPSPC 122
Score = 37.3 bits (75), Expect(2) = 4e-010
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
+F L+ FLISLSVLPG+ A+ DHL P+
Sbjct: 376 NFPLIRVLQ*FLISLSVLPGNLRAMRDHLLPQ 281
Score = 26.7 bits (52), Expect(2) = 2.1
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1 / +1
Query: 352 MAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHS 468
M AGA P L K E G*GG T G S S
Sbjct: 124 MGKGAGAFSPKQLD*KELEEAAG*GGLTPSGLVSSTARS 240
Score = 25.4 bits (49), Expect(2) = 2.1
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEA 610
+QVVS+C+ R++ *+QE +E +Q + E+
Sbjct: 287 QQVVSHCTEITRKNGQ*NQELLENSNQGKIES 382
>gb|CX651169.1|CX651169 COLD1_50_D03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_50_D03_A029 5', mRNA sequence
Length = 337
Score = 150 bits (322), Expect = 3e-035
Identities = 57/94 (60%), Positives = 70/94 (74%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K+ L +G W+ ED L +I HG G W ++PK AGL+RCGKSCRLRW+N
Sbjct: 53 KMGRSPCCSKEGLNRGAWTKREDMILSEYIRIHGDGGWRNMPKRAGLKRCGKSCRLRWLN 232
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIA 536
YLRPD+KRG + DEE+LII LH +LGNRWS IA
Sbjct: 233 YLRPDIKRGNISPDEEELIIRLHRLLGNRWSLIA 334
Score = 50.1 bits (103), Expect = 5e-005
Identities = 28/61 (45%), Positives = 29/61 (47%)
Frame = -3 / -2
Query: 535 AI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPW 356
AI DH PR S P L SG R*F H +LQLFPH PA LG L P
Sbjct: 333 AISDHRLPRRRWSRIMSSSSSGEMFPRLMSGRR*FSHRNLQLFPHRLRPALLGIFLHPPS 154
Query: 355 P 353
P
Sbjct: 153 P 151
Score = 36.8 bits (74), Expect = 0.53
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = +1 / +3
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RW +L A + G GP R+ S T + MAM G + P G ER G*T
Sbjct: 54 RWADLLVAQKKGSTVGPGPKGRI*FSPNTFEFMAMVDGEICPKEQVLNGVERAADYDG*T 233
Query: 436 I 438
I
Sbjct: 234 I 236
Score = 36.3 bits (73), Expect = 0.73
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
DG+ LLL+ A+ L GG ++ H+ +W W +E +Q + V KEL + +L
Sbjct: 55 DGQISLLLKRRAQPWGLDQKGGYDSLRIHSNSWRWWMEKYAQKSRS*TVWKELQITMAEL 234
Query: 437 S 439
S
Sbjct: 235 S 237
>gb|DR690028.1|DR690028 EST1080114 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACQ27 3' end, mRNA sequence
Length = 778
Score = 111 bits (238), Expect(2) = 3e-034
Identities = 45/86 (52%), Positives = 60/86 (69%)
Frame = +3 / +2
Query: 279 YKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKR 458
+K+ R+ P K+++ I +GH CW VPKLAGL RCGK+CRLRW NYLRPDLKR
Sbjct: 17 HKKLQRESHVQPLIYNKVVDFILNNGHCCWRIVPKLAGLLRCGKTCRLRWTNYLRPDLKR 196
Query: 459 GAFAQDEEDLIIELHAVLGNRWSQIA 536
+ ++ LI+E H+ LGNRW++IA
Sbjct: 197 EELSDIDKHLIMEPHSKLGNRWAKIA 274
Score = 57.9 bits (120), Expect(2) = 1e-015
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = -3 / -2
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
N+ +SG R*F+HLSLQ+ PHL PAS GT QQ WP M
Sbjct: 204 NSSRFKSGRR*FVHLSLQVLPHLNKPASFGTMRQQQWPLLRM 79
Score = 55.1 bits (114), Expect(2) = 3e-034
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +3 / +3
Query: 549 GRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADH 659
G TDNEI+N WN+ IKKKLR GIDP H+ + A H
Sbjct: 276 GHTDNEIQNHWNTHIKKKLRHMGIDPVIHQSIIVARH 386
Score = 46.4 bits (95), Expect(2) = 1e-015
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3 / -1
Query: 634 WVLGSMPFCLSFFLMHEFHRFLISLSVLP 548
W+ GS+P CLSFFLM F F ISLSV P
Sbjct: 361 WITGSIPMCLSFFLMWVFQ*FCISLSV*P 275
Score = 41.4 bits (84), Expect = 0.022
Identities = 20/72 (27%), Positives = 43/72 (59%)
Frame = -2 / -1
Query: 536 CNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAM 357
C+L PPV + +V L +++ + L++ +I+ P + T+L+A + S+ N AP A+
Sbjct: 274 CDLCPPVTKFAVGLHNKMLIYI**LFPLQIRTKIIRPSESTSLTASQQTSKLWNDAPTAV 95
Query: 356 AMLCYVIHEFLI 321
A++ I++ ++
Sbjct: 94 AIVENEINDLVV 59
>gb|DT635793.1|DT635793 EST1150724 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGK66 3' end, mRNA sequence
Length = 752
Score = 111 bits (238), Expect(2) = 3e-034
Identities = 45/86 (52%), Positives = 60/86 (69%)
Frame = +3 / +3
Query: 279 YKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKR 458
+K+ R+ P K+++ I +GH CW VPKLAGL RCGK+CRLRW NYLRPDLKR
Sbjct: 24 HKKLQRESHVQPLIYNKVVDFILNNGHCCWRIVPKLAGLLRCGKTCRLRWTNYLRPDLKR 203
Query: 459 GAFAQDEEDLIIELHAVLGNRWSQIA 536
+ ++ LI+E H+ LGNRW++IA
Sbjct: 204 EELSDIDKHLIMEPHSKLGNRWAKIA 281
Score = 57.9 bits (120), Expect(2) = 1e-015
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = -3 / -2
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
N+ +SG R*F+HLSLQ+ PHL PAS GT QQ WP M
Sbjct: 211 NSSRFKSGRR*FVHLSLQVLPHLNKPASFGTMRQQQWPLLRM 86
Score = 55.1 bits (114), Expect(2) = 3e-034
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +3 / +1
Query: 549 GRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADH 659
G TDNEI+N WN+ IKKKLR GIDP H+ + A H
Sbjct: 283 GHTDNEIQNHWNTHIKKKLRHMGIDPVIHQSIIVARH 393
Score = 46.4 bits (95), Expect(2) = 1e-015
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3 / -1
Query: 634 WVLGSMPFCLSFFLMHEFHRFLISLSVLP 548
W+ GS+P CLSFFLM F F ISLSV P
Sbjct: 368 WITGSIPMCLSFFLMWVFQ*FCISLSV*P 282
Score = 41.4 bits (84), Expect = 0.022
Identities = 20/72 (27%), Positives = 43/72 (59%)
Frame = -2 / -1
Query: 536 CNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAM 357
C+L PPV + +V L +++ + L++ +I+ P + T+L+A + S+ N AP A+
Sbjct: 281 CDLCPPVTKFAVGLHNKMLIYI**LFPLQIRTKIIRPSESTSLTASQQTSKLWNDAPTAV 102
Query: 356 AMLCYVIHEFLI 321
A++ I++ ++
Sbjct: 101 AIVENEINDLVV 66
>gb|DR746217.1|DR746217 RTCU1_35_B06.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_35_B06_A029 5', mRNA sequence
Length = 458
Score = 145 bits (311), Expect = 1e-033
Identities = 54/90 (60%), Positives = 74/90 (82%)
Frame = +3 / +2
Query: 393 LQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIK 572
L RCGKSCRLRWINYLRP+LKRG F+++E+DLII+LH +LG++WS IA +LPGRT+NEIK
Sbjct: 2 LLRCGKSCRLRWINYLRPNLKRGNFSEEEDDLIIKLHNLLGDKWSLIAGRLPGRTENEIK 181
Query: 573 NLWNSCIKKKLRQKGIDPNTHKPLTEADHG 662
N W++ +KK+ + +DP +H+ L D+G
Sbjct: 182 NYWDTHVKKRKLSRELDPQSHRSLWLPDNG 271
Score = 60.2 bits (125), Expect = 5e-008
Identities = 37/87 (42%), Positives = 38/87 (43%)
Frame = -3 / -3
Query: 661 P*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXX 482
P S S W GS FL F IS SV PG+ AI DHL P
Sbjct: 270 PLSGSHRERWDWGSSSLLNFLFLTWVSQ*FFISFSVRPGNRPAIRDHLSPNRLWSLIMRS 91
Query: 481 XXSWANAPLLRSGLR*FIHLSLQLFPH 401
S P R G R*FIH SLQLFPH
Sbjct: 90 SSSSEKFPRFRLGRR*FIHRSLQLFPH 10
>gb|CO173319.1|CO173319 NDL1_35_A08.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_35_A08_A029 5', mRNA sequence
Length = 617
Score = 138 bits (296), Expect = 1e-031
Identities = 51/72 (70%), Positives = 63/72 (87%)
Frame = +3 / +3
Query: 411 SCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSC 590
SCRL WINYLRPDLKRG F++DE+DLI+++HA+LGN+WS IA +LPGRTDNEIKN WNS
Sbjct: 3 SCRLLWINYLRPDLKRGGFSEDEDDLIVKMHALLGNKWSLIAGRLPGRTDNEIKNYWNSH 182
Query: 591 IKKKLRQKGIDP 626
+K+K+ GIDP
Sbjct: 183 LKRKIINMGIDP 218
Score = 78.0 bits (164), Expect = 2e-013
Identities = 39/72 (54%), Positives = 42/72 (58%)
Frame = -3 / -2
Query: 625 GSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRS 446
GS+P + F EF F ISLSV PG AI DHLFPR+AC S P LRS
Sbjct: 217 GSIPMLIIFLFRCEFQ*FFISLSVRPGKRPAIKDHLFPRSACILTIRSSSSSEKPPRLRS 38
Query: 445 GLR*FIHLSLQL 410
G R*FIH SLQL
Sbjct: 37 GRR*FIHNSLQL 2
Score = 55.1 bits (114), Expect = 2e-006
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = -2 / -1
Query: 650 LSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVL 471
L K G I+ + L RVP + L+I WQ RP + ++ V D+++ FV
Sbjct: 242 LLKRTAGQWIDPHVDNFSLQMRVPVVFYLVICSSWQTPSYQRPLISKECVHFDNKIVFVF 63
Query: 470 GECPSLEVWPQIVYPPQPTT 411
+ S E+ +I+YP QP T
Sbjct: 62 RKTSSFEIRAKIIYP*QPAT 3
>gb|CO361388.1|CO361388 NDL2_4_C06.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_4_C06_A029 5', mRNA sequence
Length = 840
Score = 135 bits (290), Expect(2) = 2e-031
Identities = 53/74 (71%), Positives = 62/74 (83%)
Frame = +3 / +2
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDN 563
LAGL+R GKSCRLRW+NYLRP +KRG + DEE+LII LH +LGNRWS IA +LPGRTDN
Sbjct: 98 LAGLKRSGKSCRLRWLNYLRPGIKRGNISPDEEELIIRLHRLLGNRWSLIAGRLPGRTDN 277
Query: 564 EIKNLWNSCIKKKL 605
EIKN WN+ + KKL
Sbjct: 278 EIKNYWNTHLGKKL 319
Score = 56.5 bits (117), Expect = 6e-007
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLL + VP +LD ++ P Q C+ RPP+ ++++Q ++ + G + + +IV P
Sbjct: 319 QLLAEMSVPVVLDFVVCPTRQSSCDKRPPIAKEAMQPYNKFLLIGGNVSAFDAGTKIVQP 140
Query: 425 PQPTTLSAPLK 393
TLS PLK
Sbjct: 139 A*SATLSTPLK 107
Score = 55.1 bits (114), Expect = 2e-006
Identities = 32/66 (48%), Positives = 33/66 (50%)
Frame = -3 / -1
Query: 583 FHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFP 404
F FLISLSV PGS AI DH PR C S P L G R*F +LQLFP
Sbjct: 297 FQ*FLISLSVRPGSRPAISDHRLPRRRCSRIISSSSSGEMFPRLMPGRR*FNQRNLQLFP 118
Query: 403 HL*SPA 386
PA
Sbjct: 117 LRLRPA 100
Score = 22.1 bits (42), Expect(2) = 2e-031
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3 / +3
Query: 315 EEDEKLMNHITKHGHGCWSSVPKLA 389
+ED L ++ HG W+S+P+ A
Sbjct: 15 KEDMILSDYTRIHGDCGWTSLPQKA 89
>gb|DR079868.1|DR079868 RTFEPL1_18_F11.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_18_F11_A029 3', mRNA sequence
Length = 745
Score = 138 bits (295), Expect = 2e-031
Identities = 51/74 (68%), Positives = 64/74 (86%)
Frame = +3 / +2
Query: 420 LRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKK 599
LRW+NYLRP LKRG F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+
Sbjct: 2 LRWMNYLRPQLKRGNFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKR 181
Query: 600 KLRQKGIDPNTHKP 641
KL G+DP TH+P
Sbjct: 182 KLISMGVDPLTHRP 223
Score = 68.4 bits (143), Expect = 2e-010
Identities = 37/74 (50%), Positives = 38/74 (51%)
Frame = -3 / -2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G V GS P +SF EF FLISLSV PG AI DHL PR AC S
Sbjct: 222 GRCVRGSTPMLISFLFRCEFQ*FLISLSVRPGKRPAIRDHLLPRRACSLRIRSSSSSEKF 43
Query: 460 PLLRSGLR*FIHLS 419
P G R*FIHLS
Sbjct: 42 PRFS*GRR*FIHLS 1
Score = 55.6 bits (115), Expect = 1e-006
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = -2 / -1
Query: 653 SLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 474
+L K V GINA +L L RVP ILDL++ Q P + + SVQ ++++ FV
Sbjct: 235 NLLKRTVRQGINAHADKLSLQMRVPVILDLVVCSTGQTTSYQGPLIAKKSVQFENKIVFV 56
Query: 473 LGECPSLEVWPQIVYPPQ 420
+ P+ ++ +I++P Q
Sbjct: 55 FRKIPTFQLRAKIIHPSQ 2
>gb|DR167833.1|DR167833 RTPHOS1_21_A06.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_21_A06_A029 5', mRNA sequence
Length = 575
Score = 138 bits (295), Expect = 2e-031
Identities = 50/74 (67%), Positives = 65/74 (87%)
Frame = +3 / +3
Query: 423 RWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
RWINYLRPD+KRG F+ +E++LII+LH+++GN+WS IAA+LPGRTDNEIKN WNS IK+K
Sbjct: 3 RWINYLRPDIKRGNFSSEEDELIIQLHSLIGNKWSLIAAKLPGRTDNEIKNYWNSHIKRK 182
Query: 603 LRQKGIDPNTHKPL 644
L +G DP +H+PL
Sbjct: 183 LVSRGFDPGSHRPL 224
Score = 64.3 bits (134), Expect = 3e-009
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = -2 / -1
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
+G G+ + Q LD +P +LDL++ P Q CN RP V + ++LDDE+ F E +
Sbjct: 215 MGPGVESPAHQFSLDVGIPVVLDLVVRPSGQFCCNQRPLVSDKGMKLDDELIFF**EVST 36
Query: 455 LEVWPQIVYP 426
L++ Q++YP
Sbjct: 35 LDIRTQVIYP 6
Score = 58.8 bits (122), Expect = 1e-007
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = -3 / -2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
G W GS P +F LM EF FLISLSV PG+ AAI DHLFP
Sbjct: 220 GRWDPGSNPLLTNFLLMWEFQ*FLISLSVRPGNFAAIRDHLFP 92
Score = 35.0 bits (70), Expect = 1.9
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QVVS+CS AR D DQE +E HQE+
Sbjct: 95 KQVVSDCSKIARTDGQRDQELLEFPHQEK 181
>gb|CO362724.1|CO362724 RTK1_5_A02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_5_A02_A029 5', mRNA sequence
Length = 326
Score = 113 bits (242), Expect(2) = 7e-030
Identities = 41/58 (70%), Positives = 51/58 (87%)
Frame = +3 / +3
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQI 533
G W S+PK AGL RCGKSCRLRWINYLRPDLKRG+F ++E++LII+LH+ +GN+WS I
Sbjct: 153 GSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSFVGNKWSLI 326
Score = 59.3 bits (123), Expect = 9e-008
Identities = 29/56 (51%), Positives = 30/56 (53%)
Frame = -3 / -2
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQP 359
DHL P S P RSG R*FIH SLQL PHL SPA+LG E Q P
Sbjct: 319 DHLLPTKEWSLMMSSSSSSVKLPRFRSGRR*FIHRSLQLLPHLSSPAALGRERQLP 152
Score = 55.6 bits (115), Expect = 1e-006
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = -2 / -1
Query: 533 NLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPA 363
N RP V + V+ DDE+ F E +L++ Q+VYP Q L+A +P G R PA
Sbjct: 326 N*RPLVANEGVEFDDELVFFFREASTLQIGTQVVYPSQSAALAASQQPCGLGKRTPA 156
Score = 38.6 bits (78), Expect(2) = 7e-030
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3 / +3
Query: 249 CVEMGRHSCCYKQKLRKGLWSPEEDEK 329
C +MGR CC K KG W+ +ED++
Sbjct: 36 CEKMGRSPCCEKAHTNKGAWTKQEDDR 116
>gb|DR167893.1|DR167893 RTPHOS1_21_G02.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_21_G02_A029 5', mRNA sequence
Length = 635
Score = 131 bits (281), Expect = 1e-029
Identities = 57/103 (55%), Positives = 69/103 (66%)
Frame = +3 / +2
Query: 408 KSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNS 587
KSCRLRW NYLRP +KRG F+ E+ +II LHA+LGNRWS IA+ LPGRTDNEIKN WN+
Sbjct: 11 KSCRLRWTNYLRPGIKRGNFSIHEDIVIIHLHAILGNRWSAIASHLPGRTDNEIKNHWNT 190
Query: 588 CIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSDIN 716
+K++L GIDP TH L A + ST S + N
Sbjct: 191 RLKRQLPVMGIDPVTHSLLPVAPTDSFMASSSTVIISRDAGCN 319
Score = 51.9 bits (107), Expect(2) = 2e-008
Identities = 27/50 (54%), Positives = 30/50 (60%)
Frame = -3 / -3
Query: 652 ASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTA 503
A+ S L V GS+P + F F ISLSVLPG C AI DHLFPR A
Sbjct: 255 ATGSKL*VTGSIPITGNCLFSLVFQ*FFISLSVLPGRCDAIADHLFPRIA 106
Score = 28.1 bits (55), Expect(2) = 2e-008
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3 / -3
Query: 460 PLLRSGLR*FIHLSLQLF 407
P L G R* +HLSLQLF
Sbjct: 63 PRLMPGRR*LVHLSLQLF 10
>gb|DR020641.1|DR020641 STRS1_38_G12.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_38_G12_A034 3', mRNA sequence
Length = 799
Score = 129 bits (277), Expect = 5e-029
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +3 / +2
Query: 396 QRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKN 575
+RCGKSCRLRW NYLRPD+KRG + DEEDLI+ + +LGNRWS IA +LPGRTDNEIKN
Sbjct: 2 KRCGKSCRLRWTNYLRPDIKRGNISPDEEDLIVRMRRLLGNRWSLIAGRLPGRTDNEIKN 181
Query: 576 LWNSCIKKK 602
WN+ + KK
Sbjct: 182 YWNTRLSKK 208
Score = 61.6 bits (128), Expect = 2e-008
Identities = 27/69 (39%), Positives = 39/69 (56%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
+LL RVP +LDL+I PP Q C RPP+ + + ++EV + G ++ +IV P
Sbjct: 211 RLLAQTRVPVVLDLVICPPRQSSCYQRPPIAKKATHPNNEVLLIGGNVSPFDIGTKIVRP 32
Query: 425 PQPTTLSAP 399
TTLS P
Sbjct: 31 T*STTLSTP 5
Score = 38.6 bits (78), Expect(2) = 2e-005
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = -3 / -2
Query: 601 FFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
F L F FLISLSV PGS AI DH PR
Sbjct: 207 FLLRRVFQ*FLISLSVRPGSRPAISDHRLPR 115
Score = 31.3 bits (62), Expect(2) = 2e-005
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3 / -2
Query: 460 PLLRSGLR*FIHLSLQLFPH 401
P L SG R*F+ +LQLFPH
Sbjct: 66 PRLISGRR*FVQRNLQLFPH 7
>gb|BX250447.1|BX250447 BX250447 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP037A09, mRNA sequence
Length = 399
Score = 129 bits (276), Expect = 7e-029
Identities = 47/71 (66%), Positives = 63/71 (88%)
Frame = +3 / +3
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
NYLRPDLKRG F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL
Sbjct: 3 NYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLN 182
Query: 612 KGIDPNTHKPL 644
+G+DP +H+PL
Sbjct: 183 RGLDPQSHRPL 215
Score = 65.7 bits (137), Expect = 1e-009
Identities = 30/85 (35%), Positives = 47/85 (55%)
Frame = -2 / -2
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G G AV+ L++ + +G+ + + Q LD +P +L L++ PP Q CN RP V E
Sbjct: 257 GHRGADSVAVVRLAEGAMRLGVESPV*QFSLDVSIPVVLYLVVRPPGQSACNKRPLVAE* 78
Query: 506 SVQLDDEVFFVLGECPSLEVWPQIV 432
V+ DDE F E +L++ Q+V
Sbjct: 77 GVEFDDEFVFFF*EVSTLQIRTQVV 3
Score = 51.0 bits (105), Expect = 3e-005
Identities = 29/65 (44%), Positives = 31/65 (47%)
Frame = -3 / -3
Query: 625 GSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRS 446
GS P +F LM F F ISLSV PG+ AI DHL P S P RS
Sbjct: 196 GSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLMMSSSSSSEKFPRFRS 17
Query: 445 GLR*F 431
G R*F
Sbjct: 16 GRR*F 2
>gb|CF672338.1|CF672338 RTCNT1_62_H04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_62_H04_A029 5', mRNA sequence
Length = 701
Score = 87.2 bits (184), Expect(2) = 1e-026
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = +3 / +1
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
+ GL+RCGKSCRLRW+NYLRPD+KRG EE+LII LH +LGNR+
Sbjct: 232 VVGLKRCGKSCRLRWLNYLRPDIKRGNICPAEEELIIRLHRLLGNRY 372
Score = 54.2 bits (112), Expect(2) = 1e-026
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
+MGR CC K+ L +G W+ ED L ++ HG G W ++P+ AG
Sbjct: 15 KMGRSPCCSKEGLNRGAWTKREDMILSEYVRIHGDGGWRNLPEKAG 152
Score = 37.3 bits (75), Expect = 0.39
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = -3 / -1
Query: 514 PRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPAS 383
PR C + P L SG R*F SLQLFPHL P +
Sbjct: 362 PRRRCSRIISSSSAGQMFPRLISGRR*FNQRSLQLFPHLLRPTT 231
>gb|CF387233.1|CF387233 RTDR1_11_B07.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_11_B07_A015 5', mRNA
sequence
Length = 652
Score = 121 bits (259), Expect = 2e-026
Identities = 44/72 (61%), Positives = 61/72 (84%)
Frame = +3 / +1
Query: 444 PDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGID 623
PDLKRG+F ++E++LII+LH+ +GN+WS IA +LPGRTDNEIKN WN+ IK+KL KG+D
Sbjct: 1 PDLKRGSFTEEEDELIIKLHSFVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSKGLD 180
Query: 624 PNTHKPLTEADH 659
P TH+PL + ++
Sbjct: 181 PQTHRPLGQPNN 216
Score = 62.5 bits (130), Expect = 1e-008
Identities = 23/71 (32%), Positives = 41/71 (57%)
Frame = -2 / -2
Query: 659 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 480
++ L++W +G+G+ + Q D VP +L L++ P Q CN RP + + V+ DDE+
Sbjct: 216 IVWLAEWTMGLGVESLAQQFSFDVCVPVVLYLVVRPSGQSPCN*RPLIANEGVEFDDELV 37
Query: 479 FVLGECPSLEV 447
F E +L++
Sbjct: 36 FFFREASTLQI 4
Score = 55.1 bits (114), Expect = 2e-006
Identities = 29/66 (43%), Positives = 31/66 (46%)
Frame = -3 / -3
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
SG WV GS P +F LM F F ISLSV PG+ AI DHL P S
Sbjct: 200 SGRWVWGSSPLLSNFLLMCVFQ*FFISLSVRPGNLPAIKDHLLPTKEWSLMMSSSSSSVK 21
Query: 463 APLLRS 446
P RS
Sbjct: 20 LPRFRS 3
>gb|CF392063.1|CF392063 RTDR3_12_C02.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_12_C02_A022 5', mRNA
sequence
Length = 760
Score = 85.4 bits (180), Expect(2) = 5e-026
Identities = 40/78 (51%), Positives = 48/78 (61%)
Frame = +3 / +2
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
K RKG W+ +ED + + +I+ HG G + K AGL R GKS L INYLR DLKR
Sbjct: 125 KTRKGPWTVQEDMQHIRYISSHGEGRRPFLAKAAGLNRTGKSRNLMGINYLRHDLKRSKI 304
Query: 468 AQDEEDLIIELHAVLGNR 521
A EE LII+LH GNR
Sbjct: 305 APQEERLIIKLHRRWGNR 358
Score = 56.5 bits (117), Expect(2) = 1e-011
Identities = 23/78 (29%), Positives = 44/78 (56%)
Frame = -2 / -1
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCY 342
PVP +++ +D+ FF+ + +LE+ ++V P + L++ + FG + PA +M Y
Sbjct: 358 PVPPTAMEFNDQTFFLRSDLAALEIMSEVVDPHKVAALASSV*ARCFGKKRPAPFSMRTY 179
Query: 341 VIHEFLILLRGPEPLSQL 288
+ + +LL P PL +L
Sbjct: 178 IPNMLHVLLNSPGPLPRL 125
Score = 54.2 bits (112), Expect(2) = 5e-026
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +3 / +2
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
RWS+IA LPG+TDNEIKN W + IKK+L
Sbjct: 413 RWSRIAQNLPGKTDNEIKNYWRTRIKKRL 499
Score = 34.5 bits (69), Expect(2) = 1e-011
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
S FL+ FLISLSV PG A+ DHL
Sbjct: 498 SLFLIRVLQ*FLISLSVFPGKFCAMRDHL 412
>gb|DR096412.1|DR096412 STRR1_27_G02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_27_G02_A033 5', mRNA sequence
Length = 778
Score = 117 bits (251), Expect = 2e-025
Identities = 47/77 (61%), Positives = 58/77 (75%)
Frame = +3 / -2
Query: 372 SVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPG 551
S P L+R GKSCRLRW++YLRPD+K G + +EE+LII +H +LGNRWS IA +LPG
Sbjct: 696 STP*AWRLERSGKSCRLRWMDYLRPDIKSGNISPEEEELIIRMHRLLGNRWSLIAGRLPG 517
Query: 552 RTDNEIKNLWNSCIKKK 602
RT EIKN WN+ I KK
Sbjct: 516 RTGREIKNYWNTQICKK 466
Score = 52.4 bits (108), Expect = 1e-005
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = -2 / +1
Query: 584 VP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
VP ILDL S PW C PP+ + ++ DD++ F+ +L++ +I++PP T L+
Sbjct: 484 VPIILDLTTSTPW*SSCY**PPIAKKTMHSDDKLLFLGRNVSTLDIGTKIIHPP*STALT 663
Query: 404 APLKPSEFGN 375
L+ G+
Sbjct: 664 GALQTPGLGS 693
Score = 52.4 bits (108), Expect = 1e-005
Identities = 29/60 (48%), Positives = 31/60 (51%)
Frame = -3 / +2
Query: 583 FHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFP 404
F FLIS V PG+ AI DH PR C S PLL SG R* IH +LQL P
Sbjct: 485 FQ*FLISRPVRPGNRPAISDHRLPRRRCIRMISSSSSGEMFPLLISGRR*SIHRNLQLLP 664
>gb|DR117678.1|DR117678 RTMG1_8_A10.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_8_A10_A029 5', mRNA sequence
Length = 852
Score = 115 bits (246), Expect = 1e-024
Identities = 43/70 (61%), Positives = 59/70 (84%)
Frame = +3 / +2
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNT 632
+RG F+++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ IK+KL KG+DP T
Sbjct: 8 ERGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSKGLDPQT 187
Query: 633 HKPLTEADHG 662
H+PL E +G
Sbjct: 188 HRPLGEPYNG 217
Score = 51.5 bits (106), Expect = 2e-005
Identities = 26/70 (37%), Positives = 37/70 (52%)
Frame = -2 / -3
Query: 662 AVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEV 483
A++ L+ V +GI + Q L VP +L L++ P Q CN RP V E V+ DDE+
Sbjct: 217 AIVGLA*RTVRLGIESLA*QFSLYMSVPVVLYLVVRAPGQSPCNKRPLVAEKGVEFDDEL 38
Query: 482 FFVLGECPSL 453
F E +L
Sbjct: 37 VFFFREVSTL 8
Score = 47.3 bits (97), Expect = 4e-004
Identities = 24/47 (51%), Positives = 27/47 (57%)
Frame = -3 / -1
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
S SG V GS P +F + F F ISLSV PG+ AI DHL PR
Sbjct: 204 SPSGRCVWGSSPLLSNFLFI*VFQ*FFISLSVRPGNLPAIRDHLLPR 64
>gb|DR117679.1|DR117679 RTMG1_8_A11.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_8_A11_A029 5', mRNA sequence
Length = 801
Score = 115 bits (246), Expect = 1e-024
Identities = 43/70 (61%), Positives = 58/70 (82%)
Frame = +3 / +2
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNT 632
KRG F+++E++LII+LH++LGN+WS I +LPGRTDNEIKN WN+ IK+KL KG+DP T
Sbjct: 2 KRGNFSEEEDELIIKLHSLLGNKWSLIVGRLPGRTDNEIKNYWNTHIKRKLLSKGLDPQT 181
Query: 633 HKPLTEADHG 662
H+PL E +G
Sbjct: 182 HRPLGEPYNG 211
Score = 45.5 bits (93), Expect = 0.001
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = -3 / -1
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
S SG V GS P +F + F F ISLSV PG+ I DHL PR
Sbjct: 198 SPSGRCVWGSSPLLSNFLFI*VFQ*FFISLSVRPGNLPTIRDHLLPR 58
>gb|DR109956.1|DR109956 RTS1_1_B02.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_1_B02_A029 3', mRNA sequence
Length = 729
Score = 113 bits (242), Expect = 4e-024
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +3 / -2
Query: 417 RLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIK 596
RLRW+NYLRPD+KRG +E+ LI+ELH + GNRWS+IA QLPGRTDNEIKN W + IK
Sbjct: 728 RLRWLNYLRPDVKRGNITPEEQLLILELHRLWGNRWSKIARQLPGRTDNEIKNYWRTRIK 549
Query: 597 KKLRQKGIDPN 629
K +++ D N
Sbjct: 548 KHIQKAHCDAN 516
Score = 57.9 bits (120), Expect = 2e-007
Identities = 31/61 (50%), Positives = 33/61 (54%)
Frame = -3 / +1
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
FLM FLISLSVLPGSC AI DHL P+ S P L SG R* HL+
Sbjct: 547 FLMRVLQ*FLISLSVLPGSCRAILDHLLPQRRWSSRINSCSSGVMFPRLTSGRR*LSHLN 726
Query: 418 L 416
L
Sbjct: 727 L 729
Score = 46.9 bits (96), Expect = 5e-004
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -2 / +3
Query: 629 VGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDD 489
V I + +AR P +LD ++SP W+L CNL P V ++V+ D
Sbjct: 516 VSIAVSFLNVFFNARSPVVLDFVVSPAWELPCNLGPSVTPETVEFKD 656
>gb|CF665728.1|CF665728 RTCNT1_18_C05.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_18_C05_A029 3', mRNA sequence
Length = 704
Score = 113 bits (241), Expect = 5e-024
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = +3 / +2
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNT 632
KRG F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T
Sbjct: 2 KRGNFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLT 181
Query: 633 HKP 641
H+P
Sbjct: 182 HRP 190
Score = 57.0 bits (118), Expect = 5e-007
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = -3 / -3
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 500
+G V GS P +SF EF FLISLSV PG AI DHL PR AC
Sbjct: 192 NGRCVRGSTPMLISFLFRCEFQ*FLISLSVRPGKRPAIRDHLLPRRAC 49
Score = 46.9 bits (96), Expect = 5e-004
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = -2 / -2
Query: 653 SLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 474
+L K V GINA +L L RVP ILDL++ Q P + +SVQ ++++ FV
Sbjct: 202 NLLKRTVRQGINAHADKLSLQMRVPVILDLVVCSTGQTTSYQGPLIAXESVQFENKIVFV 23
Query: 473 LGECPS 456
+ P+
Sbjct: 22 FRKIPT 5
>gb|DR017577.1|DR017577 STRS1_17_E03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_17_E03_A034 3', mRNA sequence
Length = 738
Score = 111 bits (237), Expect = 2e-023
Identities = 45/79 (56%), Positives = 57/79 (72%)
Frame = +3 / +3
Query: 444 PDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGID 623
PDLKRG F++ E++LII+ H+ LGN+WS IA LPGRTDNEIKN WN+ IKKKL + G+D
Sbjct: 3 PDLKRGNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGLD 182
Query: 624 PNTHKPLTEADHGGAAPTI 680
P +H PL E T+
Sbjct: 183 PKSHLPLGEPRDSNTTYTV 239
Score = 74.8 bits (157), Expect = 2e-012
Identities = 32/80 (40%), Positives = 46/80 (57%)
Frame = -2 / -2
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G +G AV +KW + +GI + Q LD VP +L L++ PP Q CN RP VPE
Sbjct: 245 GQNGVGSVAVTGFAKWEMRLGIESHSHQFFLDVSVPVVLYLVVRPPGQNPCNKRPFVPEA 66
Query: 506 SVQLDDEVFFVLGECPSLEV 447
V+ DDE+ F+ E +L++
Sbjct: 65 GVEFDDELVFLFREVSTLQI 6
Score = 55.6 bits (115), Expect = 1e-006
Identities = 28/47 (59%), Positives = 29/47 (61%)
Frame = -3 / -3
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
S SG LGS P +FFLM F F ISLSV PG AI DHLFPR
Sbjct: 208 SPSGR*DLGSSPILTNFFLM*VFQWFFISLSVRPGKIRAIRDHLFPR 68
>gb|DR050127.1|DR050127 RTBOR1_21_A09.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_21_A09_A029 5', mRNA sequence
Length = 867
Score = 95.5 bits (202), Expect(2) = 2e-023
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +3 / +2
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F E+ I++ HA GN+W+ IA LPGRTDN IKN
Sbjct: 338 RSGKSCRLRWCNQLSPQVEHRPFTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNH 517
Query: 579 WNSCIKKKLR 608
WNS ++++ R
Sbjct: 518 WNSTLRRRCR 547
Score = 35.4 bits (71), Expect(2) = 2e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G W+ + K
Sbjct: 239 KGPWSPEEDASLQRLVQKYGPRNWTLISK 325
Score = 32.7 bits (65), Expect = 9.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSV PG AI HL P
Sbjct: 525 EFQWFLIALSVRPGRARAIVAHLLP 451
>gb|DR013838.1|DR013838 HEAT1_21_G09.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_21_G09_A029 5', mRNA sequence
Length = 813
Score = 95.5 bits (202), Expect(2) = 2e-023
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F E+ I++ HA GN+W+ IA LPGRTDN IKN
Sbjct: 315 RSGKSCRLRWCNQLSPQVEHRPFTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNH 494
Query: 579 WNSCIKKKLR 608
WNS ++++ R
Sbjct: 495 WNSTLRRRCR 524
Score = 35.4 bits (71), Expect(2) = 2e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G W+ + K
Sbjct: 216 KGPWSPEEDASLQRLVQKYGPRNWTLISK 302
Score = 32.7 bits (65), Expect = 9.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3 / -3
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSV PG AI HL P
Sbjct: 502 EFQWFLIALSVRPGRARAIVAHLLP 428
>gb|DR024798.1|DR024798 STRS1_67_B12.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_67_B12_A034 5', mRNA sequence
Length = 812
Score = 95.5 bits (202), Expect(2) = 2e-023
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +3 / +2
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F E+ I++ HA GN+W+ IA LPGRTDN IKN
Sbjct: 314 RSGKSCRLRWCNQLSPQVEHRPFTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNH 493
Query: 579 WNSCIKKKLR 608
WNS ++++ R
Sbjct: 494 WNSTLRRRCR 523
Score = 35.4 bits (71), Expect(2) = 2e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G W+ + K
Sbjct: 215 KGPWSPEEDASLQRLVQKYGPRNWTLISK 301
Score = 32.7 bits (65), Expect = 9.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3 / -3
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSV PG AI HL P
Sbjct: 501 EFQWFLIALSVRPGRARAIVAHLLP 427
>gb|DR089099.1|DR089099 RTAL1_6_B11.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_6_B11_A029 5', mRNA sequence
Length = 809
Score = 95.5 bits (202), Expect(2) = 2e-023
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +3 / +2
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F E+ I++ HA GN+W+ IA LPGRTDN IKN
Sbjct: 188 RSGKSCRLRWCNQLSPQVEHRPFTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNH 367
Query: 579 WNSCIKKKLR 608
WNS ++++ R
Sbjct: 368 WNSTLRRRCR 397
Score = 35.4 bits (71), Expect(2) = 2e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G W+ + K
Sbjct: 89 KGPWSPEEDASLQRLVQKYGPRNWTLISK 175
Score = 32.7 bits (65), Expect = 9.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3 / -3
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSV PG AI HL P
Sbjct: 375 EFQWFLIALSVRPGRARAIVAHLLP 301
>gb|CO364221.1|CO364221 RTK1_14_A05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_14_A05_A029 5', mRNA sequence
Length = 801
Score = 95.5 bits (202), Expect(2) = 2e-023
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F E+ I++ HA GN+W+ IA LPGRTDN IKN
Sbjct: 315 RSGKSCRLRWCNQLSPQVEHRPFTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNH 494
Query: 579 WNSCIKKKLR 608
WNS ++++ R
Sbjct: 495 WNSTLRRRCR 524
Score = 35.4 bits (71), Expect(2) = 2e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G W+ + K
Sbjct: 216 KGPWSPEEDASLQRLVQKYGPRNWTLISK 302
Score = 32.7 bits (65), Expect = 9.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3 / -3
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSV PG AI HL P
Sbjct: 502 EFQWFLIALSVRPGRARAIVAHLLP 428
>gb|CV139163.1|CV139163 EST850372 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBC55 5' end, mRNA sequence
Length = 794
Score = 95.5 bits (202), Expect(2) = 2e-023
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F E+ I++ HA GN+W+ IA LPGRTDN IKN
Sbjct: 333 RSGKSCRLRWCNQLSPQVEHRPFTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNH 512
Query: 579 WNSCIKKKLR 608
WNS ++++ R
Sbjct: 513 WNSTLRRRCR 542
Score = 35.4 bits (71), Expect(2) = 2e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G W+ + K
Sbjct: 234 KGPWSPEEDASLQRLVQKYGPRNWTLISK 320
Score = 32.7 bits (65), Expect = 9.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3 / -2
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSV PG AI HL P
Sbjct: 520 EFQWFLIALSVRPGRARAIVAHLLP 446
>gb|DR024941.1|DR024941 STRS1_68_B11.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_68_B11_A034 5', mRNA sequence
Length = 746
Score = 95.5 bits (202), Expect(2) = 2e-023
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F E+ I++ HA GN+W+ IA LPGRTDN IKN
Sbjct: 310 RSGKSCRLRWCNQLSPQVEHRPFTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNH 489
Query: 579 WNSCIKKKLR 608
WNS ++++ R
Sbjct: 490 WNSTLRRRCR 519
Score = 35.4 bits (71), Expect(2) = 2e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G W+ + K
Sbjct: 211 KGPWSPEEDASLQRLVQKYGPRNWTLISK 297
Score = 32.7 bits (65), Expect = 9.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSV PG AI HL P
Sbjct: 497 EFQWFLIALSVRPGRARAIVAHLLP 423
>gb|DT626587.1|DT626587 EST1158511 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAC43 5' end, mRNA sequence
Length = 738
Score = 95.5 bits (202), Expect(2) = 2e-023
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F E+ I++ HA GN+W+ IA LPGRTDN IKN
Sbjct: 333 RSGKSCRLRWCNQLSPQVEHRPFTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNH 512
Query: 579 WNSCIKKKLR 608
WNS ++++ R
Sbjct: 513 WNSTLRRRCR 542
Score = 35.4 bits (71), Expect(2) = 2e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G W+ + K
Sbjct: 234 KGPWSPEEDASLQRLVQKYGPRNWTLISK 320
Score = 32.7 bits (65), Expect = 9.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3 / -3
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSV PG AI HL P
Sbjct: 520 EFQWFLIALSVRPGRARAIVAHLLP 446
>gb|CF669684.1|CF669684 RTCNT1_45_A07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_45_A07_A029 5', mRNA sequence
Length = 686
Score = 95.5 bits (202), Expect(2) = 2e-023
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F E+ I++ HA GN+W+ IA LPGRTDN IKN
Sbjct: 301 RSGKSCRLRWCNQLSPQVEHRPFTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNH 480
Query: 579 WNSCIKKKLR 608
WNS ++++ R
Sbjct: 481 WNSTLRRRCR 510
Score = 35.4 bits (71), Expect(2) = 2e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G W+ + K
Sbjct: 202 KGPWSPEEDASLQRLVQKYGPRNWTLISK 288
Score = 32.7 bits (65), Expect = 9.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSV PG AI HL P
Sbjct: 488 EFQWFLIALSVRPGRARAIVAHLLP 414
>gb|CF386912.1|CF386912 RTDR1_9_D07.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_9_D07_A015 5', mRNA
sequence
Length = 666
Score = 95.5 bits (202), Expect(2) = 2e-023
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F E+ I++ HA GN+W+ IA LPGRTDN IKN
Sbjct: 303 RSGKSCRLRWCNQLSPQVEHRPFTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNH 482
Query: 579 WNSCIKKKLR 608
WNS ++++ R
Sbjct: 483 WNSTLRRRCR 512
Score = 35.4 bits (71), Expect(2) = 2e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G W+ + K
Sbjct: 204 KGPWSPEEDASLQRLVQKYGPRNWTLISK 290
Score = 32.7 bits (65), Expect = 9.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3 / -3
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSV PG AI HL P
Sbjct: 490 EFQWFLIALSVRPGRARAIVAHLLP 416
>gb|DR059765.1|DR059765 RTNIT1_19_D08.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_19_D08_A029 5', mRNA sequence
Length = 832
Score = 110 bits (235), Expect = 3e-023
Identities = 41/63 (65%), Positives = 53/63 (84%)
Frame = +3 / -2
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNT 632
KRG F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T
Sbjct: 831 KRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLT 652
Query: 633 HKP 641
+P
Sbjct: 651 RRP 643
Score = 58.8 bits (122), Expect = 1e-007
Identities = 28/48 (58%), Positives = 30/48 (62%)
Frame = -3 / +2
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 500
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC
Sbjct: 641 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRAC 784
Score = 47.8 bits (98), Expect = 3e-004
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = -2 / +1
Query: 644 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 465
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+ +
Sbjct: 640 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFIFRK 819
Query: 464 CPS 456
S
Sbjct: 820 TSS 828
>gb|DN448288.1|DN448288 EST944087 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIC315 5' end, mRNA sequence
Length = 967
Score = 91.8 bits (194), Expect(2) = 5e-023
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F +E+ I+ HA GN+W+ IA L GRTDN IKN
Sbjct: 270 RSGKSCRLRWCNQLSPQVEHRPFTPEEDATIVRAHAQHGNKWATIARMLSGRTDNAIKNH 449
Query: 579 WNSCIKKKLRQKG 617
WNS ++++ + G
Sbjct: 450 WNSTLRRRCQGGG 488
Score = 37.7 bits (76), Expect(2) = 5e-023
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + + K+G WS + K
Sbjct: 171 KGPWSPEEDAALQHFVQKYGPRNWSLISK 257
Score = 32.7 bits (65), Expect = 9.3
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -3 / -1
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSVLP S AI HL P
Sbjct: 457 EFQWFLIALSVLPLSMRAIVAHLLP 383
>gb|DT625580.1|DT625580 EST1157504 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA149 5' end, mRNA sequence
Length = 889
Score = 91.8 bits (194), Expect(2) = 5e-023
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F +E+ I+ HA GN+W+ IA L GRTDN IKN
Sbjct: 253 RSGKSCRLRWCNQLSPQVEHRPFTPEEDATIVRAHAQHGNKWATIARMLSGRTDNAIKNH 432
Query: 579 WNSCIKKKLRQKG 617
WNS ++++ + G
Sbjct: 433 WNSTLRRRCQGGG 471
Score = 37.7 bits (76), Expect(2) = 5e-023
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + + K+G WS + K
Sbjct: 154 KGPWSPEEDAALQHFVQKYGPRNWSLISK 240
Score = 32.7 bits (65), Expect = 9.3
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -3 / -3
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSVLP S AI HL P
Sbjct: 440 EFQWFLIALSVLPLSMRAIVAHLLP 366
>gb|CN783759.1|CN783759 EST782450 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAC68 5' end, mRNA sequence
Length = 872
Score = 91.8 bits (194), Expect(2) = 5e-023
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F +E+ I+ HA GN+W+ IA L GRTDN IKN
Sbjct: 253 RSGKSCRLRWCNQLSPQVEHRPFTPEEDATIVRAHAQHGNKWATIARMLSGRTDNAIKNH 432
Query: 579 WNSCIKKKLRQKG 617
WNS ++++ + G
Sbjct: 433 WNSTLRRRCQGGG 471
Score = 37.7 bits (76), Expect(2) = 5e-023
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + + K+G WS + K
Sbjct: 154 KGPWSPEEDAALQHFVQKYGPRNWSLISK 240
Score = 32.7 bits (65), Expect = 9.3
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -3 / -1
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSVLP S AI HL P
Sbjct: 440 EFQWFLIALSVLPLSMRAIVAHLLP 366
>gb|CV138259.1|CV138259 EST849468 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIB084 5' end, mRNA sequence
Length = 847
Score = 91.8 bits (194), Expect(2) = 5e-023
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F +E+ I+ HA GN+W+ IA L GRTDN IKN
Sbjct: 250 RSGKSCRLRWCNQLSPQVEHRPFTPEEDATIVRAHAQHGNKWATIARMLSGRTDNAIKNH 429
Query: 579 WNSCIKKKLRQKG 617
WNS ++++ + G
Sbjct: 430 WNSTLRRRCQGGG 468
Score = 37.7 bits (76), Expect(2) = 5e-023
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + + K+G WS + K
Sbjct: 151 KGPWSPEEDAALQHFVQKYGPRNWSLISK 237
Score = 32.7 bits (65), Expect = 9.3
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -3 / -3
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSVLP S AI HL P
Sbjct: 437 EFQWFLIALSVLPLSMRAIVAHLLP 363
>gb|DT624539.1|DT624539 EST1158826 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAF82 5' end, mRNA sequence
Length = 754
Score = 91.8 bits (194), Expect(2) = 5e-023
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F +E+ I+ HA GN+W+ IA L GRTDN IKN
Sbjct: 270 RSGKSCRLRWCNQLSPQVEHRPFTPEEDATIVRAHAQHGNKWATIARMLSGRTDNAIKNH 449
Query: 579 WNSCIKKKLRQKG 617
WNS ++++ + G
Sbjct: 450 WNSTLRRRCQGGG 488
Score = 37.7 bits (76), Expect(2) = 5e-023
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + + K+G WS + K
Sbjct: 171 KGPWSPEEDAALQHFVQKYGPRNWSLISK 257
Score = 32.7 bits (65), Expect = 9.3
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -3 / -1
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSVLP S AI HL P
Sbjct: 457 EFQWFLIALSVLPLSMRAIVAHLLP 383
>gb|DN458982.1|DN458982 EST954781 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIHH93 5' end, mRNA sequence
Length = 941
Score = 93.6 bits (198), Expect(2) = 6e-023
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ E+ II+ HA GN+W+ IA LPGRTDN IKN
Sbjct: 198 RSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNH 377
Query: 579 WNSCIKKK 602
WNS ++++
Sbjct: 378 WNSTLRRR 401
Score = 35.4 bits (71), Expect(2) = 6e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G WS + +
Sbjct: 99 KGPWSPEEDASLHKLVEKYGPRNWSQISR 185
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -2 / -1
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
+RVP +LD ++ P + N P V + L D F+ E L + Q+V PP P
Sbjct: 389 SRVPVVLDSVVGAPGEEAGNRSPLVAMPRMGLYDGGVFMWAERAVLHLGAQLVTPP*P 216
>gb|CN783895.1|CN783895 EST782586 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAE59 5' end, mRNA sequence
Length = 937
Score = 93.6 bits (198), Expect(2) = 6e-023
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ E+ II+ HA GN+W+ IA LPGRTDN IKN
Sbjct: 265 RSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNH 444
Query: 579 WNSCIKKK 602
WNS ++++
Sbjct: 445 WNSTLRRR 468
Score = 35.4 bits (71), Expect(2) = 6e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G WS + +
Sbjct: 166 KGPWSPEEDASLHKLVEKYGPRNWSQISR 252
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -2 / -2
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
+RVP +LD ++ P + N P V + L D F+ E L + Q+V PP P
Sbjct: 456 SRVPVVLDSVVGAPGEEAGNRSPLVAMPRMGLYDGGVFMWAERAVLHLGAQLVTPP*P 283
>gb|DN464734.1|DN464734 EST960533 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJF92 5' end, mRNA sequence
Length = 939
Score = 93.6 bits (198), Expect(2) = 6e-023
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3 / +2
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ E+ II+ HA GN+W+ IA LPGRTDN IKN
Sbjct: 266 RSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNH 445
Query: 579 WNSCIKKK 602
WNS ++++
Sbjct: 446 WNSTLRRR 469
Score = 35.4 bits (71), Expect(2) = 6e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G WS + +
Sbjct: 167 KGPWSPEEDASLHKLVEKYGPRNWSQISR 253
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -2 / -3
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
+RVP +LD ++ P + N P V + L D F+ E L + Q+V PP P
Sbjct: 457 SRVPVVLDSVVGAPGEEAGNRSPLVAMPRMGLYDGGVFMWAERAVLHLGAQLVTPP*P 284
>gb|DN455288.1|DN455288 EST951087 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGC65 5' end, mRNA sequence
Length = 932
Score = 93.6 bits (198), Expect(2) = 6e-023
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ E+ II+ HA GN+W+ IA LPGRTDN IKN
Sbjct: 258 RSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNH 437
Query: 579 WNSCIKKK 602
WNS ++++
Sbjct: 438 WNSTLRRR 461
Score = 35.4 bits (71), Expect(2) = 6e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G WS + +
Sbjct: 159 KGPWSPEEDASLHKLVEKYGPRNWSQISR 245
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -2 / -1
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
+RVP +LD ++ P + N P V + L D F+ E L + Q+V PP P
Sbjct: 449 SRVPVVLDSVVGAPGEEAGNRSPLVAMPRMGLYDGGVFMWAERAVLHLGAQLVTPP*P 276
>gb|CV135175.1|CV135175 EST846384 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PICM856 5' end, mRNA sequence
Length = 926
Score = 93.6 bits (198), Expect(2) = 6e-023
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ E+ II+ HA GN+W+ IA LPGRTDN IKN
Sbjct: 252 RSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNH 431
Query: 579 WNSCIKKK 602
WNS ++++
Sbjct: 432 WNSTLRRR 455
Score = 35.4 bits (71), Expect(2) = 6e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G WS + +
Sbjct: 153 KGPWSPEEDASLHKLVEKYGPRNWSQISR 239
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -2 / -1
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
+RVP +LD ++ P + N P V + L D F+ E L + Q+V PP P
Sbjct: 443 SRVPVVLDSVVGAPGEEAGNRSPLVAMPRMGLYDGGVFMWAERAVLHLGAQLVTPP*P 270
>gb|DN463709.1|DN463709 EST959508 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJ226 5' end, mRNA sequence
Length = 914
Score = 93.6 bits (198), Expect(2) = 6e-023
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ E+ II+ HA GN+W+ IA LPGRTDN IKN
Sbjct: 256 RSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNH 435
Query: 579 WNSCIKKK 602
WNS ++++
Sbjct: 436 WNSTLRRR 459
Score = 35.4 bits (71), Expect(2) = 6e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G WS + +
Sbjct: 157 KGPWSPEEDASLHKLVEKYGPRNWSQISR 243
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -2 / -3
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
+RVP +LD ++ P + N P V + L D F+ E L + Q+V PP P
Sbjct: 447 SRVPVVLDSVVGAPGEEAGNRSPLVAMPRMGLYDGGVFMWAERAVLHLGAQLVTPP*P 274
>gb|DT626735.1|DT626735 EST1159811 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAQ67 5' end, mRNA sequence
Length = 900
Score = 93.6 bits (198), Expect(2) = 6e-023
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ E+ II+ HA GN+W+ IA LPGRTDN IKN
Sbjct: 198 RSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNH 377
Query: 579 WNSCIKKK 602
WNS ++++
Sbjct: 378 WNSTLRRR 401
Score = 35.4 bits (71), Expect(2) = 6e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G WS + +
Sbjct: 99 KGPWSPEEDASLHKLVEKYGPRNWSQISR 185
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -2 / -2
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
+RVP +LD ++ P + N P V + L D F+ E L + Q+V PP P
Sbjct: 389 SRVPVVLDSVVGAPGEEAGNRSPLVAMPRMGLYDGGVFMWAERAVLHLGAQLVTPP*P 216
>gb|CO412408.1|CO412408 EST842793 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALW92 5' end, mRNA sequence
Length = 880
Score = 93.6 bits (198), Expect(2) = 6e-023
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ E+ II+ HA GN+W+ IA LPGRTDN IKN
Sbjct: 258 RSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNH 437
Query: 579 WNSCIKKK 602
WNS ++++
Sbjct: 438 WNSTLRRR 461
Score = 35.4 bits (71), Expect(2) = 6e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G WS + +
Sbjct: 159 KGPWSPEEDASLHKLVEKYGPRNWSQISR 245
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -2 / -3
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
+RVP +LD ++ P + N P V + L D F+ E L + Q+V PP P
Sbjct: 449 SRVPVVLDSVVGAPGEEAGNRSPLVAMPRMGLYDGGVFMWAERAVLHLGAQLVTPP*P 276
>gb|DN452317.1|DN452317 EST948116 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIFD73 5' end, mRNA sequence
Length = 879
Score = 93.6 bits (198), Expect(2) = 6e-023
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3 / +2
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ E+ II+ HA GN+W+ IA LPGRTDN IKN
Sbjct: 257 RSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNH 436
Query: 579 WNSCIKKK 602
WNS ++++
Sbjct: 437 WNSTLRRR 460
Score = 35.4 bits (71), Expect(2) = 6e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G WS + +
Sbjct: 158 KGPWSPEEDASLHKLVEKYGPRNWSQISR 244
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -2 / -3
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
+RVP +LD ++ P + N P V + L D F+ E L + Q+V PP P
Sbjct: 448 SRVPVVLDSVVGAPGEEAGNRSPLVAMPRMGLYDGGVFMWAERAVLHLGAQLVTPP*P 275
>gb|CV136199.1|CV136199 EST847408 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIA840 5' end, mRNA sequence
Length = 874
Score = 93.6 bits (198), Expect(2) = 6e-023
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ E+ II+ HA GN+W+ IA LPGRTDN IKN
Sbjct: 252 RSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNH 431
Query: 579 WNSCIKKK 602
WNS ++++
Sbjct: 432 WNSTLRRR 455
Score = 35.4 bits (71), Expect(2) = 6e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G WS + +
Sbjct: 153 KGPWSPEEDASLHKLVEKYGPRNWSQISR 239
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -2 / -3
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
+RVP +LD ++ P + N P V + L D F+ E L + Q+V PP P
Sbjct: 443 SRVPVVLDSVVGAPGEEAGNRSPLVAMPRMGLYDGGVFMWAERAVLHLGAQLVTPP*P 270
>gb|DN447482.1|DN447482 EST943281 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBT46 5' end, mRNA sequence
Length = 866
Score = 93.6 bits (198), Expect(2) = 6e-023
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ E+ II+ HA GN+W+ IA LPGRTDN IKN
Sbjct: 204 RSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNH 383
Query: 579 WNSCIKKK 602
WNS ++++
Sbjct: 384 WNSTLRRR 407
Score = 35.4 bits (71), Expect(2) = 6e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G WS + +
Sbjct: 105 KGPWSPEEDASLHKLVEKYGPRNWSQISR 191
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -2 / -1
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
+RVP +LD ++ P + N P V + L D F+ E L + Q+V PP P
Sbjct: 395 SRVPVVLDSVVGAPGEEAGNRSPLVAMPRMGLYDGGVFMWAERAVLHLGAQLVTPP*P 222
>gb|DN456471.1|DN456471 EST952270 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGP36 5' end, mRNA sequence
Length = 800
Score = 93.6 bits (198), Expect(2) = 6e-023
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ E+ II+ HA GN+W+ IA LPGRTDN IKN
Sbjct: 450 RSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNH 629
Query: 579 WNSCIKKK 602
WNS ++++
Sbjct: 630 WNSTLRRR 653
Score = 35.4 bits (71), Expect(2) = 6e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G WS + +
Sbjct: 351 KGPWSPEEDASLHKLVEKYGPRNWSQISR 437
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -2 / -1
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
+RVP +LD ++ P + N P V + L D F+ E L + Q+V PP P
Sbjct: 641 SRVPVVLDSVVGAPGEEAGNRSPLVAMPRMGLYDGGVFMWAERAVLHLGAQLVTPP*P 468
>gb|CO411548.1|CO411548 EST841933 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALL67 5' end, mRNA sequence
Length = 731
Score = 93.6 bits (198), Expect(2) = 6e-023
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ E+ II+ HA GN+W+ IA LPGRTDN IKN
Sbjct: 258 RSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNH 437
Query: 579 WNSCIKKK 602
WNS ++++
Sbjct: 438 WNSTLRRR 461
Score = 35.4 bits (71), Expect(2) = 6e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G WS + +
Sbjct: 159 KGPWSPEEDASLHKLVEKYGPRNWSQISR 245
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -2 / -1
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
+RVP +LD ++ P + N P V + L D F+ E L + Q+V PP P
Sbjct: 449 SRVPVVLDSVVGAPGEEAGNRSPLVAMPRMGLYDGGVFMWAERAVLHLGAQLVTPP*P 276
>gb|CO414624.1|CO414624 EST845009 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMQ84 5' end, mRNA sequence
Length = 700
Score = 93.6 bits (198), Expect(2) = 6e-023
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ E+ II+ HA GN+W+ IA LPGRTDN IKN
Sbjct: 258 RSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNH 437
Query: 579 WNSCIKKK 602
WNS ++++
Sbjct: 438 WNSTLRRR 461
Score = 35.4 bits (71), Expect(2) = 6e-023
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED L + K+G WS + +
Sbjct: 159 KGPWSPEEDASLHKLVEKYGPRNWSQISR 245
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -2 / -3
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
+RVP +LD ++ P + N P V + L D F+ E L + Q+V PP P
Sbjct: 449 SRVPVVLDSVVGAPGEEAGNRSPLVAMPRMGLYDGGVFMWAERAVLHLGAQLVTPP*P 276
>gb|CD022618.1|CD022618 NXPV_071_H11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_071_H11 5' similar to Arabidopsis
thaliana sequence At1g63910 putative MYB family
transcription factor see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 193
Score = 108 bits (230), Expect = 2e-022
Identities = 35/61 (57%), Positives = 51/61 (83%)
Frame = +3 / +3
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
+ MGRH CC +QK+++GLWSP+EDEKL+N+ITK+G+GCWS +P+ + QRCGK+C+ +
Sbjct: 6 IAMGRHLCCNQQKVKRGLWSPDEDEKLINYITKYGYGCWSEIPEKSXPQRCGKNCKXXRV 185
Query: 432 N 434
N
Sbjct: 186 N 188
Score = 45.1 bits (92), Expect = 0.002
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +1 / +1
Query: 247 IALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALF 378
+ L+W AATSR * G G RMR+S IT* SM MA G F
Sbjct: 1 LILQWDATYAATSRK*NVGYGHQMRMRSSSIT*PSMVMAVGVKF 132
Score = 43.2 bits (88), Expect = 0.006
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +2 / +2
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLE 370
+G +L AE+E A+V G*E H+ HN+ W WLLE
Sbjct: 11 NGTPLMLQPAESETWAMVTR*G*EAHQLHNQVWLWLLE 124
Score = 40.5 bits (82), Expect = 0.042
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -2 / -3
Query: 434 VYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
+ P L L+ F N P A+ +L YVI E LIL+ P P LLVAA + H
Sbjct: 188 INPXXFAVLPTTLRX*FFRNFTPTAITILGYVIDELLILIW*P*PTFHFLLVAA*VASHC 9
Query: 254 N 252
N
Sbjct: 8 N 6
Score = 35.0 bits (70), Expect = 1.9
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = -1 / -2
Query: 414 NSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASPSQ 253
+S EA E S+SH H LC+ * SHP T A S SA S + P Q
Sbjct: 168 SSSHNVEALIFQEFHSNSHNHTWLCN**ASHPHLVTIAHVSLSAGCSISGVPLQ 7
>gb|CO367106.1|CO367106 RTK1_32_E03.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_E03_A029 3', mRNA sequence
Length = 867
Score = 108 bits (230), Expect = 2e-022
Identities = 40/62 (64%), Positives = 52/62 (83%)
Frame = +3 / +3
Query: 456 RGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTH 635
RG F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +K+KL G+DP T
Sbjct: 3 RGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTR 182
Query: 636 KP 641
+P
Sbjct: 183 RP 188
Score = 58.8 bits (122), Expect = 1e-007
Identities = 28/48 (58%), Positives = 30/48 (62%)
Frame = -3 / -3
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 500
+G V GS P +SF EF FLISLSV PG AI DHLFPR AC
Sbjct: 190 NGRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRAC 47
Score = 47.8 bits (98), Expect = 3e-004
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = -2 / -2
Query: 644 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 465
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+ +
Sbjct: 191 KWTTGQGIDPHADEFSLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFIFRK 12
Query: 464 CPS 456
S
Sbjct: 11 TSS 3
>gb|CV033833.1|CV033833 RTNACL1_36_H06.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_36_H06_A029 5', mRNA sequence
Length = 777
Score = 106 bits (227), Expect = 4e-022
Identities = 43/75 (57%), Positives = 52/75 (69%)
Frame = +3 / +3
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
RKG W+ EED +L +I HG G WS + + AGL+R G+SCRLRW+N LRPDLKR
Sbjct: 216 RKGPWTVEEDMQLTGYIRLHGEGRWSFLARAAGLKRTGRSCRLRWLNSLRPDLKRSKITP 395
Query: 474 DEEDLIIELHAVLGN 518
+EE LIIELH GN
Sbjct: 396 EEEHLIIELHGRWGN 440
Score = 48.3 bits (99), Expect = 2e-004
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = -3 / -3
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
LRSG R HLSLQL P L SPA+L +LQ+P PC
Sbjct: 376 LRSGRRELSHLSLQLLPVLLSPAALARKLQRPSPC 272
>gb|DR112102.1|DR112102 RTS1_25_H07.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_25_H07_A029 5', mRNA sequence
Length = 651
Score = 106 bits (227), Expect = 4e-022
Identities = 43/75 (57%), Positives = 52/75 (69%)
Frame = +3 / +1
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
RKG W+ EED +L +I HG G WS + + AGL+R G+SCRLRW+N LRPDLKR
Sbjct: 202 RKGPWTVEEDMQLTGYIRLHGEGRWSFLARAAGLKRTGRSCRLRWLNSLRPDLKRSKITP 381
Query: 474 DEEDLIIELHAVLGN 518
+EE LIIELH GN
Sbjct: 382 EEEHLIIELHGRWGN 426
Score = 48.3 bits (99), Expect(2) = 2e-004
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = -3 / -2
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
LRSG R HLSLQL P L SPA+L +LQ+P PC
Sbjct: 362 LRSGRRELSHLSLQLLPVLLSPAALARKLQRPSPC 258
Score = 21.7 bits (41), Expect(2) = 2e-004
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1 / -2
Query: 306 RAPFSASACSSKNAS 262
+ PF SACSS + S
Sbjct: 215 QGPFLVSACSSSSMS 171
>gb|CO162486.1|CO162486 FLD1_35_D02.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_35_D02_A029 5', mRNA sequence
Length = 779
Score = 105 bits (225), Expect = 8e-022
Identities = 39/61 (63%), Positives = 53/61 (86%)
Frame = +3 / -3
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
+F ++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+P
Sbjct: 777 SFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRP 598
Query: 642 L 644
L
Sbjct: 597 L 595
Score = 64.3 bits (134), Expect = 3e-009
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -2 / +1
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 565 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 744
Query: 494 DDEVFFVLGE 465
DDE F E
Sbjct: 745 DDEFVFFFCE 774
Score = 51.5 bits (106), Expect = 2e-005
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -3 / +2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 506
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 599 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 733
>gb|BE241255.1|BE241255 NXNV_183_D12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_183_D12 5' similar to Arabidopsis thaliana
sequence At5g12870 putative transcription factor (MYB46)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 419
Score = 104 bits (221), Expect = 3e-021
Identities = 40/62 (64%), Positives = 48/62 (77%)
Frame = +3 / +2
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
AF+ EE LII LH++LGNRWSQI+A+LPGRTDNEIKN WNSCIKKKL+ N K
Sbjct: 2 AFSPQEEQLIIHLHSILGNRWSQISARLPGRTDNEIKNFWNSCIKKKLKHLSASTNNSKS 181
Query: 642 LT 647
++
Sbjct: 182 IS 187
Score = 59.3 bits (123), Expect = 9e-008
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = -3 / -3
Query: 610 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 500
C +FF M EF +FLISLSV PG A I*DHL PR C
Sbjct: 150 CFNFFFMQEFQKFLISLSVRPGKRAEI*DHLLPRMEC 40
Score = 51.5 bits (106), Expect = 2e-005
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = -2 / -2
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGEC 462
QLLL A VP ILDL++ Q NLRPPV E+ +Q+ D++FF+ +C
Sbjct: 145 QLLLYAGVPEILDLVVRTSGQTG*NLRPPVAENGMQVYDQLFFLG*KC 2
>gb|DR015297.1|DR015297 STRS1_2_D10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_D10_A034 5', mRNA sequence
Length = 871
Score = 103 bits (220), Expect = 4e-021
Identities = 39/59 (66%), Positives = 50/59 (84%)
Frame = +3 / +1
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
F++DE+DLI++LHA+LGN+WS IA +LPGRTDNEIKN WNS +KKKL G+DP T +P
Sbjct: 4 FSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKKKLISIGVDPLTRRP 180
Score = 61.6 bits (128), Expect = 2e-008
Identities = 29/48 (60%), Positives = 31/48 (64%)
Frame = -3 / -3
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 500
+G V GS P +SFF EF FLISLSV PG AI DHLFPR AC
Sbjct: 182 NGRRVRGSTPMLMSFFFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRAC 39
Score = 47.3 bits (97), Expect = 4e-004
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -2 / -2
Query: 644 KWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 474
KW G GI+ + L RVP + DL++S Q RP + E+ VQ ++++ F+
Sbjct: 183 KWTTGQGIDPNADEFFLQMRVPVVFDLVVSSTRQTTRYQRPLISEEGVQFENKIVFI 13
>gb|CX648339.1|CX648339 COLD1_28_B12.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_28_B12_A029 3', mRNA sequence
Length = 868
Score = 102 bits (218), Expect = 7e-021
Identities = 38/58 (65%), Positives = 51/58 (87%)
Frame = +3 / +1
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
++E++LII+LH+V+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 4 EEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 177
Score = 63.8 bits (133), Expect = 4e-009
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = -2 / -2
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V +D V+
Sbjct: 207 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLVADDGVEF 28
Query: 494 DDEVFF 477
DDE F
Sbjct: 27 DDEFVF 10
Score = 51.5 bits (106), Expect = 2e-005
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 506
G W GS+P +F LM F F ISLSV PG+ AI DHL P T
Sbjct: 173 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTT 39
>gb|DR120088.1|DR120088 RTMG1_27_A10.g2_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_27_A10_A029 5', mRNA sequence
Length = 713
Score = 100 bits (214), Expect = 3e-020
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = +3 / +2
Query: 429 INYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
+NYLRP +KR F+ DEE+LI+ LH +LGNRWS IA +LPGRTDNEIKN WN+ + KKL
Sbjct: 170 MNYLRPRIKRRNFSSDEEELILRLHRLLGNRWSLIAGRLPGRTDNEIKNHWNTYLSKKL 346
Score = 47.8 bits (98), Expect = 3e-004
Identities = 29/64 (45%), Positives = 30/64 (46%)
Frame = -3 / -3
Query: 613 FCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR* 434
F +F L F FLISLSV PGS AI DH PR C S L G R*
Sbjct: 354 FVTNFLLR*VFQWFLISLSVRPGSRPAISDHRLPRRRCSRRMSSSSSEEKFRRLIRGRR* 175
Query: 433 FIHL 422
FI L
Sbjct: 174 FIEL 163
Score = 43.2 bits (88), Expect = 0.006
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = -2 / -2
Query: 629 VGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLE 450
+G+ QLL VP +LD +I Q C RPP+ + ++Q +E+ F+ G+ +
Sbjct: 370 LGLTFVCYQLLAQISVPVVLDFVICSARQSPCYQRPPIAKKTMQPKNELLFIGGKVSTFN 191
Query: 449 VWPQIVY 429
+IV+
Sbjct: 190 TRTKIVH 170
>gb|DR100867.1|DR100867 STRR1_68_H01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_68_H01_A033 5', mRNA sequence
Length = 236
Score = 100 bits (213), Expect = 4e-020
Identities = 40/78 (51%), Positives = 51/78 (65%)
Frame = +3 / +3
Query: 261 GRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 440
GR K+ L +G W+ ED L +I HG G W + K AGL+RC KSC LRW+NYL
Sbjct: 3 GRSPWPPKEALNRGAWTGMEDTILTEYIRVHGSGGWKDISKRAGLKRCAKSC*LRWLNYL 182
Query: 441 RPDLKRGAFAQDEEDLII 494
RPD+KRG + +EE+LII
Sbjct: 183 RPDIKRGNISPEEEELII 236
Score = 46.9 bits (96), Expect = 5e-004
Identities = 24/65 (36%), Positives = 33/65 (50%)
Frame = -2 / -1
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
++E+FF+ + + +IV P Q TL PLK FG+ PA AM V+ E IL
Sbjct: 236 NNELFFLRRNVTTFNIGTKIVQPTQSATLCTPLKTCSFGDIFPATTAMNSNVLGENRILH 57
Query: 314 RGPEP 300
P P
Sbjct: 56 ACPSP 42
Score = 34.1 bits (68), Expect = 3.6
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P L SG R*F + QLF HL PA L Q P P
Sbjct: 202 PRLISGRR*FSQRNQQLFAHLLRPALLEISFQPPLP 95
>gb|CF403056.1|CF403056 RTWW1_24_G08.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_24_G08_A015 5', mRNA sequence
Length = 726
Score = 98.2 bits (208), Expect = 2e-019
Identities = 37/71 (52%), Positives = 55/71 (77%)
Frame = +3 / +2
Query: 450 LKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPN 629
LKRG F+ +E+DLII+LH +LG++WS IA +LPGRT+NEIKN W++ +KK+ + +DP
Sbjct: 2 LKRGNFSVEEDDLIIKLHNLLGDKWSLIAGRLPGRTENEIKNYWDTHVKKRKLSRELDPQ 181
Query: 630 THKPLTEADHG 662
+H+ L D+G
Sbjct: 182 SHRSLWLPDNG 214
Score = 34.5 bits (69), Expect = 2.6
Identities = 21/51 (41%), Positives = 23/51 (45%)
Frame = -3 / -1
Query: 661 P*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
P S S W GS FL F IS SV PG+ AI DHL P+
Sbjct: 213 PLSGSHRERWDWGSSSLLNFLFLTWVSQ*FFISFSVRPGNRPAIRDHLSPK 61
>gb|DR098178.1|DR098178 STRR1_39_D04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_39_D04_A033 5', mRNA sequence
Length = 690
Score = 97.7 bits (207), Expect = 2e-019
Identities = 36/68 (52%), Positives = 50/68 (73%)
Frame = +3 / +2
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ +E+ +I+E H++ GN+W+ IA LPGRTDN IKN
Sbjct: 62 RSGKSCRLRWCNQLSPQVQHRPFSPEEDRMIMEAHSMHGNKWATIARILPGRTDNAIKNH 241
Query: 579 WNSCIKKK 602
WNS +++K
Sbjct: 242 WNSTLRRK 265
>gb|CF395399.1|CF395399 RTDS2_11_H08.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_11_H08_A021 5', mRNA sequence
Length = 741
Score = 96.4 bits (204), Expect = 6e-019
Identities = 36/65 (55%), Positives = 51/65 (78%)
Frame = +3 / +2
Query: 450 LKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPN 629
LKRG F+++E++LII LH++LGN+WS IA +LPGRT NEIKN W+ +K+K +G+ P
Sbjct: 110 LKRGNFSEEEDELIIRLHSLLGNKWSLIAGRLPGRTGNEIKNHWSIHMKRKWSSRGLHPQ 289
Query: 630 THKPL 644
TH+ L
Sbjct: 290 THRSL 304
Score = 57.9 bits (120), Expect = 2e-007
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3 / +2
Query: 522 WSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGID 623
WS IA +LPGRTDNEIKN W++ IK+KL KG D
Sbjct: 2 WSLIAGRLPGRTDNEIKNHWSTHIKRKLLIKGFD 103
Score = 40.0 bits (81), Expect = 0.058
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = -3 / -1
Query: 631 VLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 506
V G P F M F ISL V PG+ AI DHLFPR+
Sbjct: 291 VCGWSPLLDHFLFMCMLQWFFISLPVRPGNLPAIRDHLFPRS 166
Score = 36.3 bits (73), Expect = 0.73
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -3 / -1
Query: 622 SMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DH 521
S P +F LM F ISLSVLPG+ AI DH
Sbjct: 102 SNPLINNFLLMCVLQWFFISLSVLPGNLPAIRDH 1
>gb|BQ701199.1|BQ701199 NXSI_023_G01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_023_G01 5' similar to Arabidopsis thaliana
sequence At5g67300 myb-related protein, 33.3K
(pir||S71284) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 497
Score = 90.4 bits (191), Expect(2) = 7e-019
Identities = 35/70 (50%), Positives = 44/70 (62%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F E+ I++ HA GN+W+ IA LPGRTDN KN
Sbjct: 85 RSGKSCRLRWCNQLSPQVEHRPFTPSEDAAILQAHAQHGNKWATIARALPGRTDNAXKNH 264
Query: 579 WNSCIKKKLR 608
WNS + + R
Sbjct: 265 WNSTLXXRCR 294
Score = 24.9 bits (48), Expect(2) = 7e-019
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3 / +1
Query: 312 PEEDEKLMNHITKHGHGCWSSVPK 383
PEED L + K+G W+ + K
Sbjct: 1 PEEDASLQRLVQKYGPRNWTLISK 72
>gb|CO361758.1|CO361758 NDL2_6_H01.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_6_H01_A029 5', mRNA sequence
Length = 782
Score = 77.6 bits (163), Expect(2) = 9e-019
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +3 / +1
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
RWS IA +L GRTDNEIKN WNS IKKKL KG+DP TH PL
Sbjct: 358 RWSLIAGRLAGRTDNEIKNYWNSHIKKKLLSKGLDPKTHCPL 483
Score = 51.5 bits (106), Expect(2) = 2e-005
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = -2 / -3
Query: 659 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
V+ L++ VG+G+ + Q LLD VP +L L++S P Q CN RPP
Sbjct: 498 VVGLAEGTVGLGVESLA*QFLLDVTVPVVLYLVVSSPCQSPCNKRPP 358
Score = 51.0 bits (105), Expect = 3e-005
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
G WVLGS P +FFLM F F ISLSV P + AI DHL
Sbjct: 479 GQWVLGSSPLLSNFFLM*LFQ*FFISLSVRPANLPAIRDHL 357
Score = 41.4 bits (84), Expect(2) = 9e-019
Identities = 14/24 (58%), Positives = 22/24 (91%)
Frame = +3 / +1
Query: 453 KRGAFAQDEEDLIIELHAVLGNRW 524
+RG F ++E++LII+LHAVLGN++
Sbjct: 10 QRGGFTEEEDELIIKLHAVLGNKY 81
Score = 22.1 bits (42), Expect(2) = 2e-005
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -3 / -1
Query: 523 HLFPRTAC 500
+LFPRTAC
Sbjct: 80 YLFPRTAC 57
>gb|CF672556.1|CF672556 RTCNT1_64_A03.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_64_A03_A029 5', mRNA sequence
Length = 253
Score = 95.5 bits (202), Expect = 1e-018
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F E+ I++ HA GN+W+ IA LPGRTDN IKN
Sbjct: 27 RSGKSCRLRWCNQLSPQVEHRPFTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNH 206
Query: 579 WNSCIKKKLR 608
WNS ++++ R
Sbjct: 207 WNSTLRRRCR 236
Score = 32.7 bits (65), Expect = 9.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSV PG AI HL P
Sbjct: 214 EFQWFLIALSVRPGRARAIVAHLLP 140
>gb|CO366361.1|CO366361 RTK1_27_A03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_27_A03_A029 5', mRNA sequence
Length = 842
Score = 95.5 bits (202), Expect = 1e-018
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F E+ I++ HA GN+W+ IA LPGRTDN IKN
Sbjct: 13 RSGKSCRLRWCNQLSPQVEHRPFTPSEDAAILQAHAQHGNKWATIARALPGRTDNAIKNH 192
Query: 579 WNSCIKKKLR 608
WNS ++++ R
Sbjct: 193 WNSTLRRRCR 222
Score = 32.7 bits (65), Expect = 9.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFP 512
EF FLI+LSV PG AI HL P
Sbjct: 200 EFQWFLIALSVRPGRARAIVAHLLP 126
>gb|DT627526.1|DT627526 EST1160602 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAZ54 5' end, mRNA sequence
Length = 635
Score = 93.6 bits (198), Expect = 4e-018
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F+ E+ II+ HA GN+W+ IA LPGRTDN IKN
Sbjct: 15 RSGKSCRLRWCNQLSPQVEHRPFSPHEDATIIQAHARHGNKWATIARLLPGRTDNAIKNH 194
Query: 579 WNSCIKKK 602
WNS ++++
Sbjct: 195 WNSTLRRR 218
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -2 / -1
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
+RVP +LD ++ P + N P V + L D F+ E L + Q+V PP P
Sbjct: 206 SRVPVVLDSVVGAPGEEAGNRSPLVAMPRMGLYDGGVFMWAERAVLHLGAQLVTPP*P 33
>gb|BE644136.1|BE644136 NXCI_054_H06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_054_H06 5' similar to Arabidopsis
thaliana sequence At1g66230 myb-related transcription
factor, putative see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 378
Score = 93.2 bits (197), Expect = 6e-018
Identities = 35/61 (57%), Positives = 39/61 (63%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L+KG W+ EED KL+N IT HGHGCW VPKLA L RCG W
Sbjct: 193 KMGRQPCCDKVGLKKGPWTAEEDRKLVNFITLHGHGCWREVPKLAXLLRCGXXXXXXWTX 372
Query: 435 Y 437
Y
Sbjct: 373 Y 375
Score = 49.6 bits (102), Expect = 7e-005
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = -2 / -1
Query: 437 IVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
+ P L+ + S+FG APA+MAM IH+F + L P L Q V AR+PPH
Sbjct: 375 VXXPTXXXXLATSKQXSKFGYFAPASMAMQGDKIHQFSVFLCSPWTLLQSHFVTARLPPH 196
Query: 257 LN 252
+
Sbjct: 195 FS 190
Score = 44.6 bits (91), Expect = 0.002
Identities = 23/63 (36%), Positives = 25/63 (39%)
Frame = -3 / -2
Query: 436 *FIHLSLQLFPHL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL*QQECLPI 257
* + L PHL ASLGT Q PWPC V+ L Q CLPI
Sbjct: 374 *XVQXXXXLXPHLSRXASLGTSRQHPWPCRVIKFTSFLSSSAVHGPFFNPTLSQHGCLPI 195
Query: 256 STQ 248
Q
Sbjct: 194 FRQ 186
Score = 38.6 bits (78), Expect = 0.15
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +1 / +2
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSL 390
+WGG A T * R G R+ N *I MAM AGA +PN L
Sbjct: 194 KWGGNRAVTKWD*RRVHGLQRKTENW*ILSPCMAMDAGAKYPNLL 328
Score = 38.6 bits (78), Expect = 0.15
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2 / +3
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQT 385
+GEA +L Q+ E+G++ G +T E ++ AWPW+L +QT
Sbjct: 195 NGEATVL*QSGIEEGSMDCRGRQKTGEFYHPAWPWMLARSTQT 323
>gb|CD020726.1|CD020726 NXNV_088_G08_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_088_G08 5' similar to Arabidopsis thaliana
sequence At4g38620 putative transcription factor (MYB4)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 156
Score = 92.7 bits (196), Expect = 8e-018
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = +3 / +2
Query: 372 SVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
++PK AGL RCGKSCRLRWINYLRPDLKRG F++ E+ LII+ H+ N+W
Sbjct: 2 ALPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSEQEDXLIIKFHSRXXNKW 154
Score = 47.3 bits (97), Expect = 4e-004
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -2 / -3
Query: 524 PPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFG 378
P V V+ DDE F+ E +L++ Q+VYP +P T AP +P G
Sbjct: 154 PFVXXXGVEFDDEXVFLFREVSTLQIGTQVVYPSEPATFPAPQQPCGLG 8
Score = 45.1 bits (92), Expect = 0.002
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = -3 / -1
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLG 377
P +SG R*FIH SLQLFPH +PA+LG
Sbjct: 90 PRFKSGRR*FIHRSLQLFPHRSNPAALG 7
>gb|CF470298.1|CF470298 RTDS1_18_B11.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_18_B11_A015 5', mRNA sequence
Length = 800
Score = 68.9 bits (144), Expect(2) = 9e-018
Identities = 29/49 (59%), Positives = 34/49 (69%)
Frame = +3 / +2
Query: 372 SVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGN 518
S +L L+R G+SCRLRW+N LRPDLKR +EE LIIELH GN
Sbjct: 149 SPEQLV*LKRTGRSCRLRWLNSLRPDLKRSKITPEEEHLIIELHGRWGN 295
Score = 42.8 bits (87), Expect(2) = 9e-018
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3 / +1
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGL 395
RKG W+ EED +L +I HG G WS + + AG+
Sbjct: 67 RKGPWTVEEDMQLTGYIRLHGEGRWSFLARAAGM 168
Score = 29.5 bits (58), Expect(2) = 0.032
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1 / -2
Query: 390 QRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSA 289
Q +W +SSS+ H +C * ++P +R P S+
Sbjct: 163 QLLWRESSSALPHVTVCIQ*AAYPLPQSRDPSSS 62
Score = 29.0 bits (57), Expect(2) = 0.032
Identities = 16/28 (57%), Positives = 16/28 (57%)
Frame = -3 / -3
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGTE 371
LRSG R HLSLQL P L S S E
Sbjct: 231 LRSGRRELSHLSLQLLPVLLSHTSCSGE 148
>gb|BQ654678.1|BQ654678 NXRV084_C01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV084_C01 5' similar to Arabidopsis thaliana
sequence At4g01680 putative transcription factor see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 388
Score = 91.8 bits (194), Expect = 1e-017
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSV 377
MGRHSCCYKQKLRKGLWS DEKL+ HITK+GHGCWS++
Sbjct: 267 MGRHSCCYKQKLRKGLWSXXXDEKLVRHITKYGHGCWSAL 386
Score = 39.1 bits (79), Expect = 0.11
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2 / -3
Query: 368 PAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
PA+MA+ + H+ LI P+ L + L VAAR+ PH
Sbjct: 377 PASMAVFGNMAHQLLIXXXRPQTLPEFLFVAARVAPH 267
>gb|DR094280.1|DR094280 STRR1_13_C10.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_13_C10_A033 5', mRNA sequence
Length = 826
Score = 90.9 bits (192), Expect = 3e-017
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P + R F++++E+ ++ H + GN+W+ IA PGRTDN +KN
Sbjct: 262 RSGKSCRLRWFNQLDPRINRRPFSEEDEEKLLAAHRLYGNKWAMIARLFPGRTDNAVKNH 441
Query: 579 WNSCIKKKLRQK 614
W+ + ++ R++
Sbjct: 442 WHVIMARRYREQ 477
Score = 30.9 bits (61), Expect(2) = 0.007
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 467 ECPSLEVWPQIVYPPQPTTLS 405
E PS++ W Q++ PP+P LS
Sbjct: 330 ERPSVDSWVQLIKPPKPAALS 268
Score = 29.9 bits (59), Expect(2) = 0.007
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -3 / -3
Query: 574 FLISLSVLPGSCAAI*DHLFP 512
F +LSVLPG+ AI HLFP
Sbjct: 437 FFTALSVLPGNKRAIMAHLFP 375
>gb|DR120873.1|DR120873 RTMG1_32_B08.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_32_B08_A029 5', mRNA sequence
Length = 851
Score = 90.9 bits (192), Expect = 3e-017
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3 / +2
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P + R F++++E+ ++ H + GN+W+ IA PGRTDN +KN
Sbjct: 539 RSGKSCRLRWFNQLDPRINRRPFSEEDEEKLLAAHRLYGNKWAMIARLFPGRTDNAVKNH 718
Query: 579 WNSCIKKKLRQK 614
W+ + ++ R++
Sbjct: 719 WHVIMARRYREQ 754
Score = 30.9 bits (61), Expect(2) = 0.007
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 467 ECPSLEVWPQIVYPPQPTTLS 405
E PS++ W Q++ PP+P LS
Sbjct: 607 ERPSVDSWVQLIKPPKPAALS 545
Score = 29.9 bits (59), Expect(2) = 0.007
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -3 / -3
Query: 574 FLISLSVLPGSCAAI*DHLFP 512
F +LSVLPG+ AI HLFP
Sbjct: 714 FFTALSVLPGNKRAIMAHLFP 652
>gb|DR167601.1|DR167601 RTPHOS1_19_G10.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_19_G10_A029 5', mRNA sequence
Length = 776
Score = 90.9 bits (192), Expect = 3e-017
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P + R F++++E+ ++ H + GN+W+ IA PGRTDN +KN
Sbjct: 60 RSGKSCRLRWFNQLDPRINRRPFSEEDEEKLLAAHRLYGNKWAMIARLFPGRTDNAVKNH 239
Query: 579 WNSCIKKKLRQK 614
W+ + ++ R++
Sbjct: 240 WHVIMARRYREQ 275
Score = 30.9 bits (61), Expect(2) = 0.007
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 467 ECPSLEVWPQIVYPPQPTTLS 405
E PS++ W Q++ PP+P LS
Sbjct: 128 ERPSVDSWVQLIKPPKPAALS 66
Score = 29.9 bits (59), Expect(2) = 0.007
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -3 / -2
Query: 574 FLISLSVLPGSCAAI*DHLFP 512
F +LSVLPG+ AI HLFP
Sbjct: 235 FFTALSVLPGNKRAIMAHLFP 173
>gb|DR177927.1|DR177927 RTMNUT1_8_E11.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_8_E11_A029 3', mRNA sequence
Length = 794
Score = 90.9 bits (192), Expect = 3e-017
Identities = 37/68 (54%), Positives = 47/68 (69%)
Frame = +3 / +2
Query: 477 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEAD 656
E++LII+ H+ GN+WS IA LPGRTDNEIKN WN+ IKKKL + G+DP +H PL E
Sbjct: 5 EDELIIKFHSRXGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGLDPKSHLPLGEPR 184
Query: 657 HGGAAPTI 680
T+
Sbjct: 185 DSNTTYTV 208
Score = 69.8 bits (146), Expect = 6e-011
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = -2 / -2
Query: 686 GADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
G +G AV +KW + +GI + Q LD RVP +L L++ PP Q CN RP VP
Sbjct: 214 GQNGVGSVAVTGFAKWEMRLGIESHSHQFFLDVRVPVVLYLVVRPPGQNPCNKRPFVPXA 35
Query: 506 SVQLDDEVFFV 474
V+ DDE+ F+
Sbjct: 34 GVEFDDELVFL 2
Score = 53.8 bits (111), Expect = 4e-006
Identities = 27/46 (58%), Positives = 28/46 (60%)
Frame = -3 / -3
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
S SG LGS P +FFLM F F ISLSV PG AI DHLFP
Sbjct: 177 SPSGR*DLGSSPILTNFFLMCVFQWFFISLSVRPGKIRAIRDHLFP 40
Score = 33.6 bits (67), Expect = 4.9
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +1 / +3
Query: 544 CQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAP 687
C GG R R GTR SR++ IP+ SHL +TA P P
Sbjct: 72 CPGGRTTR*RTTGTRTSRKNW*EWDSIPSLISHLANPVTATLPTPFWP 215
>gb|DR080000.1|DR080000 RTFEPL1_19_A02.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_19_A02_A029 5', mRNA sequence
Length = 671
Score = 90.4 bits (191), Expect = 4e-017
Identities = 34/52 (65%), Positives = 41/52 (78%)
Frame = +3 / +2
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQL 545
GL RCGKSCRLRW+NYLRPD+KRG + DEE+LII +H +LGNR Q+ L
Sbjct: 14 GLNRCGKSCRLRWLNYLRPDIKRGNISPDEEELIIRMHRLLGNR*EQLWVDL 169
>gb|BF610487.1|BF610487 NXSI_059_A09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_059_A09 5' similar to Arabidopsis thaliana
sequence At5g67300 myb-related protein, 33.3K
(pir||S71284) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 304
Score = 83.1 bits (175), Expect(2) = 1e-016
Identities = 33/70 (47%), Positives = 41/70 (58%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++ F E+ I++ HA GN+W+ IA LPGRTDN N
Sbjct: 85 RSGKSCRLRWCNQLSPQVEHRPFTPSEDAAILQAHAQHGNKWATIARALPGRTDNAXXNH 264
Query: 579 WNSCIKKKLR 608
W S + R
Sbjct: 265 WXSTLXXXCR 294
Score = 24.9 bits (48), Expect(2) = 1e-016
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3 / +1
Query: 312 PEEDEKLMNHITKHGHGCWSSVPK 383
PEED L + K+G W+ + K
Sbjct: 1 PEEDASLQRLVQKYGPRNWTLISK 72
>gb|CO165016.1|CO165016 FLD1_51_F09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_51_F09_A029 5', mRNA sequence
Length = 694
Score = 88.6 bits (187), Expect = 1e-016
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = +3 / +2
Query: 405 GKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN 584
GKSCRLRW N L P ++ F E+ I++ HA GN+W+ IA LPGRTD IKN WN
Sbjct: 8 GKSCRLRWCNQLSPQVEHRPFTPAEDAAILQAHAQHGNQWATIARALPGRTDYAIKNHWN 187
Query: 585 SCIKKKLR 608
S ++++ R
Sbjct: 188 STLRRRCR 211
>gb|DR386158.1|DR386158 RTHG1_13_G03.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_13_G03_A029 3', mRNA sequence
Length = 786
Score = 88.6 bits (187), Expect = 1e-016
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +3 / +2
Query: 450 LKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
+KRG + DEE+LII LH +LGNRWS IA ++PGRTDNE+KN WN+ + KKL G
Sbjct: 2 VKRGHISADEEELIIRLHNLLGNRWSLIAGRVPGRTDNEVKNYWNTRLSKKLGSTG 169
Score = 40.0 bits (81), Expect = 0.058
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -3 / -1
Query: 616 PFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
P SF L F F SLSVLPG+ AI DHL P
Sbjct: 168 PVLPSFLLKRVFQ*FFTSLSVLPGTLPAINDHLLP 64
>gb|BG319341.1|BG319341 NXPV_026_G12_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_026_G12 5' similar to Arabidopsis
thaliana sequence At2g37630 putative MYB family
transcription factor see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 378
Score = 79.9 bits (168), Expect(2) = 2e-016
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = +3 / +1
Query: 393 LQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIK 572
L R KSC RW NYL+P +K+G+ ++E+ L+I L A GN+W +IAA++PG T
Sbjct: 166 LDRDAKSCLERWKNYLKPGIKKGSLTEEEQSLVISLQAKYGNKWKKIAAEVPGXTAKRXX 345
Query: 573 NLWNSCIKKKL 605
W +K+L
Sbjct: 346 XWWEXFKEKQL 378
Score = 41.4 bits (84), Expect = 0.022
Identities = 26/69 (37%), Positives = 30/69 (43%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S F ++ H +V PG+ AAI HL P A S P GLR*F H
Sbjct: 377 SCFSLNXSHHXXXLFAVXPGTSAAIFFHLLPYFA*RLITSDCSSSVKEPFFIPGLR*FFH 198
Query: 424 LSLQLFPHL 398
LS Q F L
Sbjct: 197 LSKQDFASL 171
Score = 27.6 bits (54), Expect(2) = 2e-016
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3 / +1
Query: 306 WSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
W PEED L ++ ++G W+ V + G
Sbjct: 73 WQPEEDALLRAYVKQYGPREWNLVSQRMG 159
>gb|BX000680.1|BX000680 BX000680 Pinus pinaster xylem Pinus pinaster cDNA clone PPSW14,
mRNA sequence
Length = 235
Score = 86.3 bits (182), Expect = 7e-016
Identities = 34/60 (56%), Positives = 43/60 (71%)
Frame = +3 / -2
Query: 456 RGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTH 635
RG + DEE+LII LH +LGNRWS IA ++PGRTDNE+KN WN+ + KKL G + H
Sbjct: 234 RGHISADEEELIIRLHNLLGNRWSLIAGRVPGRTDNEVKNYWNTRLSKKLGSTGDNLQGH 55
Score = 40.0 bits (81), Expect = 0.058
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -3 / +2
Query: 616 PFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
P SF L F F SLSVLPG+ AI DHL P
Sbjct: 74 PVLPSFLLKRVFQ*FFTSLSVLPGTLPAINDHLLP 178
>gb|CO164694.1|CO164694 FLD1_49_E04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_49_E04_A029 5', mRNA sequence
Length = 916
Score = 85.8 bits (181), Expect = 9e-016
Identities = 31/50 (62%), Positives = 41/50 (82%)
Frame = +3 / +1
Query: 510 LGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADH 659
+GN+WS IA +LPGRTDNEIKN WN+ IK+KL KG+DP TH+PL + ++
Sbjct: 7 VGNKWSLIAVRLPGRTDNEIKNYWNTHIKRKLLSKGLDPQTHRPLGQPNN 156
Score = 54.7 bits (113), Expect = 2e-006
Identities = 25/44 (56%), Positives = 27/44 (61%)
Frame = -3 / -3
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
SG WV GS P +F LM F F ISLSV PG+ AI DHL P
Sbjct: 140 SGRWVWGSSPLLSNFLLMCVFQ*FFISLSVRPGNLTAIKDHLLP 9
Score = 45.1 bits (92), Expect = 0.002
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = -2 / -2
Query: 659 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
++ L++W +G+G+ + Q D VP +L L++ P Q CN RP + +
Sbjct: 156 IVWLAEWTMGLGVESLAQQFSFDVCVPVVLYLVVRPSGQSHCN*RPLIANE 4
>gb|CX646566.1|CX646566 COLD1_10_D06.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_10_D06_A029 3', mRNA sequence
Length = 802
Score = 85.4 bits (180), Expect = 1e-015
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +3 / +1
Query: 510 LGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADH 659
LGN+WS IA +LPGRTDNEIKN WNS +K+KL GIDP TH+P + H
Sbjct: 1 LGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGIDPLTHRPFQKTSH 150
Score = 55.1 bits (114), Expect = 2e-006
Identities = 25/43 (58%), Positives = 27/43 (62%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
G WV GS+P +SF EF F ISLSV PG AI DHLFP
Sbjct: 131 GRWVRGSIPMLISFRFRCEFQ*FFISLSVRPGKRPAIKDHLFP 3
Score = 34.5 bits (69), Expect = 2.6
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -2 / -2
Query: 692 SLGADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRP 522
SL GG V SL K +G G+ + + L RVP +L L+I WQ RP
Sbjct: 183 SLTFCGGEG*XVRSLLKRTMG*GVYSHADKFSLQMRVPVVLYLVICSSWQTASYQRP 13
>gb|CF398623.1|CF398623 RTDS3_13_E02.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_13_E02_A022 3', mRNA sequence
Length = 754
Score = 84.5 bits (178), Expect = 2e-015
Identities = 32/69 (46%), Positives = 51/69 (73%)
Frame = +3 / +2
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
+R + G +++E++LII LH++LGN+WS IA +LPGR+ NEIKN W+ +K+KL ++G
Sbjct: 26 VRSASEAG*LSEEEDELIIRLHSLLGNKWSLIAGRLPGRSGNEIKNHWSIHMKRKLSRRG 205
Query: 618 IDPNTHKPL 644
+ TH+ L
Sbjct: 206 LHAQTHRSL 232
Score = 34.5 bits (69), Expect = 2.6
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 506
+F M F ISL PG+ AI DHLFPR+
Sbjct: 192 NFLFMCMLQWFFISLPDRPGNLPAIRDHLFPRS 94
>gb|CF474496.1|CF474496 RTWW2_9_D02.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_9_D02_A021 3', mRNA sequence
Length = 472
Score = 84.5 bits (178), Expect = 2e-015
Identities = 33/52 (63%), Positives = 40/52 (76%)
Frame = +3 / -3
Query: 450 LKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
++ + DEEDLI+ LH +LGNRWS IA +LPGRTDNEIKN WNS + KKL
Sbjct: 470 IRHEGISLDEEDLIVRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKL 315
Score = 38.6 bits (78), Expect = 0.15
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = -3 / +1
Query: 583 FHRFLISLSVLPGSCAAI*DHLFPRTAC 500
F FLISLSV PGS AI DH PR C
Sbjct: 337 FQ*FLISLSVRPGSRPAINDHRLPRRRC 420
Score = 38.6 bits (78), Expect = 0.15
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -2 / +3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFV 474
QLL + VP +LD ++ Q C RPP+ + ++Q ++E+ V
Sbjct: 315 QLLTEMTVPVVLDFVVCSSRQSSCYQRPPIAKKAMQPNNEILLV 446
>gb|DR692411.1|DR692411 EST1082499 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADL83 3' end, mRNA sequence
Length = 777
Score = 83.5 bits (176), Expect = 5e-015
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = +3 / +3
Query: 393 LQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIK 572
L R KSC RW NYL+P +K+G+ ++DE+ L+I L A GNRW +IAAQ+PG T +
Sbjct: 231 LDRDPKSCAERWKNYLKPGIKKGSLSEDEQRLVISLQAKYGNRWKKIAAQVPGTTAKRLS 410
Query: 573 NLWNSCIKKKLRQKGIDPNT 632
W +K+ + K + T
Sbjct: 411 KWWEVYREKQDKIKDRNERT 470
Score = 35.4 bits (71), Expect = 1.4
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -3 / -3
Query: 631 VLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
VL + F LS F + H L L+V+PG+ AAI HL P
Sbjct: 469 VLSFLSFILSCFSL*TSHHLLSLLAVVPGTWAAIFFHLLP 350
>gb|DT637439.1|DT637439 EST1152370 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMH369 3' end, mRNA sequence
Length = 861
Score = 83.5 bits (176), Expect = 5e-015
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = +3 / +2
Query: 393 LQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIK 572
L R KSC RW NYL+P +K+G+ ++DE+ L+I L A GNRW +IAAQ+PG T +
Sbjct: 239 LDRDPKSCAERWKNYLKPGIKKGSLSEDEQRLVISLQAKYGNRWKKIAAQVPGTTAKRLS 418
Query: 573 NLWNSCIKKKLRQKGIDPNT 632
W +K+ + K + T
Sbjct: 419 KWWEVYREKQDKIKDRNERT 478
Score = 35.4 bits (71), Expect = 1.4
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -3 / -1
Query: 631 VLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
VL + F LS F + H L L+V+PG+ AAI HL P
Sbjct: 477 VLSFLSFILSCFSL*TSHHLLSLLAVVPGTWAAIFFHLLP 358
>gb|CV034016.1|CV034016 RTNACL1_38_B11.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_38_B11_A029 3', mRNA sequence
Length = 821
Score = 82.6 bits (174), Expect = 9e-015
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 513 GNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
GN+WS IA +LPGRTDNEIKN WN+ IK+KL KGIDP +H+PL
Sbjct: 1 GNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 132
Score = 48.3 bits (99), Expect = 2e-004
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = -2 / -3
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPV 516
G A + L++ +G+G+++ Q LD VP +L L++ PP Q CN RP V
Sbjct: 162 GDIVAAVGLAERTMGLGVDSLDQQFSLDVSVPVVLYLVVRPPRQSSCNKRPLV 4
Score = 46.4 bits (95), Expect = 7e-004
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
G W GS+P +F LM F F ISLSV PG+ AI DHL
Sbjct: 128 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHL 6
>gb|DR016585.1|DR016585 STRS1_11_A12.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_11_A12_A034 3', mRNA sequence
Length = 581
Score = 69.8 bits (146), Expect(2) = 1e-014
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +3 / +3
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
RWS IA+ LPGRTDNEIKN+WN+ +KK+L Q G+D H P
Sbjct: 126 RWSTIASHLPGRTDNEIKNVWNTRLKKRLLQTGVDIANHVP 248
Score = 55.1 bits (114), Expect = 2e-006
Identities = 23/42 (54%), Positives = 24/42 (57%)
Frame = -3 / -2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLF 515
G W S P C F FH F ISLSVLPG C AI DHL+
Sbjct: 247 GTWFAMSTPVCRRRFFKRVFHTFFISLSVLPGRCEAIVDHLY 122
Score = 31.3 bits (62), Expect(2) = 1e-014
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / +3
Query: 465 FAQDEEDLIIELHAVLGNRWSQI 533
F+ EE II+LH +LGNR+ I
Sbjct: 6 FSLKEEQTIIQLHQILGNRYVNI 74
Database: Pinus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:25 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,146,073,574
Number of Sequences: 355925
Number of extensions: 17969618
Number of successful extensions: 88820
Number of sequences better than 10.0: 453
length of database: 72,425,745
effective HSP length: 55
effective length of database: 52,849,870
effective search space used: 32132720960
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)