TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAR2a06.yg.3.1
(612 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR100903.1|DR100903 STRR1_69_D08.b1_A033 Stem Response R... 60 3e-020
gb|DR389112.1|DR389112 RTHG1_32_B06.g1_A029 Roots plus adde... 74 6e-020
gb|CO176238.1|CO176238 NDL1_60_E11.g1_A029 Needles control ... 62 8e-020
gb|DR099807.1|DR099807 STRR1_58_F02.g1_A033 Stem Response R... 74 8e-020
gb|CO175587.1|CO175587 NDL1_55_E07.g1_A029 Needles control ... 62 8e-020
gb|DR742219.1|DR742219 RTCU1_2_C07.g1_A029 Roots plus added... 68 1e-019
gb|CF397293.1|CF397293 RTDS3_2_A09.g1_A022 Drought-stressed... 68 1e-019
gb|CF397946.1|CF397946 RTDS3_23_G06.g1_A022 Drought-stresse... 68 1e-019
gb|DR049988.1|DR049988 RTBOR1_20_B07.g1_A029 Roots plus add... 68 1e-019
gb|DR167553.1|DR167553 RTPHOS1_19_C04.g1_A029 Roots minus p... 60 1e-019
gb|DR020981.1|DR020981 STRS1_40_C10.g1_A034 Shoot tip pitch... 61 1e-019
gb|AW043070.1|AW043070 ST28H10 Pine TriplEx shoot tip libra... 62 2e-019
gb|CF470471.1|CF470471 RTDS1_17_C03.g1_A015 Drought-stresse... 69 4e-019
dbj|BD273021.1| Materials and methods for the modification ... 65 5e-019
gb|CO364204.1|CO364204 RTK1_14_G09.b1_A029 Roots minus pota... 68 9e-019
dbj|BD273050.1| Materials and methods for the modification ... 68 2e-018
gb|AF543530.1| Pinus taeda (+)-alpha-pinene synthase mRNA, ... 66 3e-018
gb|DR101942.1|DR101942 STRR1_76_G12.g1_A033 Stem Response R... 56 4e-018
gb|CF663845.1|CF663845 RTCNT1_5_B08.g1_A029 Root control Pi... 64 8e-018
gb|DR093344.1|DR093344 STRR1_7_D12.g1_A033 Stem Response Re... 69 1e-017
gb|AF543527.1| Pinus taeda (-)-alpha-pinene synthase mRNA, ... 69 2e-017
gb|DR093306.1|DR093306 STRR1_7_A05.g1_A033 Stem Response Re... 69 2e-017
gb|DR023983.1|DR023983 STRS1_61_B07.g1_A034 Shoot tip pitch... 69 2e-017
gb|CO176090.1|CO176090 NDL1_59_D02.g1_A029 Needles control ... 65 4e-017
gb|CV031792.1|CV031792 RTNACL1_3_E12.g1_A029 Roots plus add... 66 7e-017
gb|DR110543.1|DR110543 RTS1_11_B06.g1_A029 Roots minus sulf... 64 1e-016
gb|CO363234.1|CO363234 RTK1_8_B04.g1_A029 Roots minus potas... 64 1e-016
gb|AF543529.1| Pinus taeda alpha-terpineol synthase mRNA, c... 63 2e-016
dbj|BD273051.1| Materials and methods for the modification ... 65 5e-016
dbj|BD272958.1| Materials and methods for the modification ... 65 5e-016
dbj|BD273020.1| Materials and methods for the modification ... 58 7e-016
gb|DR017965.1|DR017965 STRS1_19_D07.g1_A034 Shoot tip pitch... 68 2e-015
gb|DR022742.1|DR022742 STRS1_53_D12.b1_A034 Shoot tip pitch... 74 3e-014
gb|AY779541.1| Pinus taeda diterpene synthase mRNA, complet... 54 4e-014
gb|AF543528.1| Pinus taeda alpha-farnesene synthase mRNA, c... 56 4e-014
gb|AF543531.1| Pinus taeda monoterpene synthase-like protei... 58 4e-014
gb|DR093466.1|DR093466 STRR1_8_A08.g1_A033 Stem Response Re... 54 4e-014
gb|DR161260.1|DR161260 RTFE1_10_F09.g1_A029 Roots minus iro... 54 4e-014
gb|CF475347.1|CF475347 RTWW2_13_C12.g1_A021 Well-watered lo... 53 4e-014
gb|DR016212.1|DR016212 STRS1_8_C07.g1_A034 Shoot tip pitch ... 51 1e-013
gb|CO366907.1|CO366907 RTK1_30_H07.g1_A029 Roots minus pota... 50 2e-013
gb|AW697531.1|AW697531 ST64A12 Pine TriplEx shoot tip libra... 55 1e-012
gb|CO174527.1|CO174527 NDL1_44_C05.g1_A029 Needles control ... 54 3e-012
gb|CO172156.1|CO172156 NDL1_27_E10.g1_A029 Needles control ... 70 2e-011
gb|BQ702557.1|BQ702557 NXSI_129_H11_F NXSI (Nsf Xylem Side ... 69 3e-011
gb|DR094501.1|DR094501 STRR1_15_B01.b1_A033 Stem Response R... 69 3e-011
gb|DR022955.1|DR022955 STRS1_54_C11.g1_A034 Shoot tip pitch... 68 6e-011
gb|DR025189.1|DR025189 STRS1_70_D12.b1_A034 Shoot tip pitch... 68 6e-011
gb|DR100208.1|DR100208 STRR1_62_A12.g1_A033 Stem Response R... 68 6e-011
dbj|BD272959.1| Materials and methods for the modification ... 45 2e-010
gb|CF479802.1|CF479802 RTWW3_12_D02.b1_A022 Well-watered lo... 66 2e-010
gb|CO168962.1|CO168962 NDL1_3_F03.g1_A029 Needles control P... 62 3e-010
gb|DR016616.1|DR016616 STRS1_11_E01.b1_A034 Shoot tip pitch... 64 1e-009
gb|CF474786.1|CF474786 RTWW2_7_B11.g1_A021 Well-watered lob... 62 4e-009
gb|DR094415.1|DR094415 STRR1_14_A06.g1_A033 Stem Response R... 62 4e-009
gb|CO176229.1|CO176229 NDL1_60_D09.g1_A029 Needles control ... 55 7e-009
gb|CF666483.1|CF666483 RTCNT1_23_D05.g1_A029 Root control P... 61 9e-009
gb|CX715148.1|CX715148 RTPQ1_31_H04.g1_A032 Roots treated w... 61 9e-009
gb|DR021123.1|DR021123 STRS1_42_B05.g1_A034 Shoot tip pitch... 61 9e-009
gb|DR048470.1|DR048470 RTBOR1_9_D05.b1_A029 Roots plus adde... 61 9e-009
gb|DR092877.1|DR092877 STRR1_4_D02.g1_A033 Stem Response Re... 61 9e-009
gb|DR746225.1|DR746225 RTCU1_35_C06.g1_A029 Roots plus adde... 61 9e-009
gb|DR022416.1|DR022416 STRS1_50_H11.g1_A034 Shoot tip pitch... 60 2e-008
gb|CF401916.1|CF401916 RTWW1_15_B05.g1_A015 Well-watered lo... 58 6e-008
gb|AL750951.1|AL750951 AL750951 RS Pinus pinaster cDNA clon... 57 9e-008
gb|BX677599.1|BX677599 BX677599 RN Pinus pinaster cDNA clon... 57 1e-007
gb|DR024865.1|DR024865 STRS1_68_C01.b1_A034 Shoot tip pitch... 57 2e-007
gb|CO368206.1|CO368206 RTK1_39_F05.b1_A029 Roots minus pota... 56 3e-007
gb|DR049895.1|DR049895 RTBOR1_19_G01.g1_A029 Roots plus add... 54 8e-007
gb|DR071138.1|DR071138 RTDK1_17_H03.g1_A029 Roots, dark Pin... 54 8e-007
gb|BX682869.1|BX682869 BX682869 Pinus pinaster differenciat... 54 1e-006
gb|DR120865.1|DR120865 RTMG1_32_A12.g1_A029 Roots minus mag... 54 1e-006
gb|DR102565.1|DR102565 STRR1_82_C09.b1_A033 Stem Response R... 53 2e-006
gb|BX681656.1|BX681656 BX681656 RS Pinus pinaster cDNA clon... 52 3e-006
gb|DR017800.1|DR017800 STRS1_18_C07.g1_A034 Shoot tip pitch... 52 3e-006
gb|DR096556.1|DR096556 STRR1_28_E11.g1_A033 Stem Response R... 52 3e-006
gb|DR023995.1|DR023995 STRS1_61_C09.g1_A034 Shoot tip pitch... 50 5e-006
gb|CF477103.1|CF477103 RTWW3_5_A06.g1_A022 Well-watered lob... 51 5e-006
gb|CO360998.1|CO360998 NDL2_1_H10.g1_A029 Needles control 2... 50 1e-005
gb|DR018762.1|DR018762 STRS1_25_C02.g1_A034 Shoot tip pitch... 49 3e-005
dbj|BD273017.1| Materials and methods for the modification ... 47 1e-004
gb|DR743063.1|DR743063 RTCU1_13_G06.b1_A029 Roots plus adde... 45 5e-004
gb|DR744607.1|DR744607 RTCU1_23_D08.g1_A029 Roots plus adde... 45 5e-004
dbj|BD273018.1| Materials and methods for the modification ... 45 6e-004
gb|DR017363.1|DR017363 STRS1_15_G05.g1_A034 Shoot tip pitch... 41 0.006
gb|DR015595.1|DR015595 STRS1_4_A12.g1_A034 Shoot tip pitch ... 40 0.011
gb|DR021924.1|DR021924 STRS1_47_F03.g1_A034 Shoot tip pitch... 40 0.011
gb|DR100614.1|DR100614 STRR1_65_H03.g1_A033 Stem Response R... 40 0.011
gb|AW226490.1|AW226490 ST82H11 Pine TriplEx shoot tip libra... 40 0.020
gb|DR744339.1|DR744339 RTCU1_21_G06.g1_A029 Roots plus adde... 40 0.020
dbj|BD272946.1| Materials and methods for the modification ... 40 0.020
gb|CO171798.1|CO171798 NDL1_24_D12.g1_A029 Needles control ... 38 0.073
gb|DR094934.1|DR094934 STRR1_17_E10.g1_A033 Stem Response R... 36 0.26
gb|DR100284.1|DR100284 STRR1_63_B06.b1_A033 Stem Response R... 35 0.36
gb|DR181384.1|DR181384 RTMNUT1_38_C07.g2_A029 Roots minus m... 27 1.1
gb|CR392185.1|CR392185 CR392185 RN Pinus pinaster cDNA clon... 29 1.1
gb|CO173039.1|CO173039 NDL1_33_D03.g1_A029 Needles control ... 33 2.4
gb|BQ291232.1|BQ291232 NXRV057_F01_F NXRV (Nsf Xylem Root w... 32 3.3
gb|CF479114.1|CF479114 RTWW3_24_E08.b1_A022 Well-watered lo... 32 3.3
gb|DR693647.1|DR693647 EST1083736 Normalized pine embryo li... 32 3.3
gb|DT638422.1|DT638422 EST1153353 Normalized pine embryo li... 32 3.3
gb|BM428606.1|BM428606 NXRV_019_C01_F NXRV (Nsf Xylem Root ... 32 4.5
gb|DR092320.1|DR092320 RTAL1_28_A04.g1_A029 Roots plus adde... 26 4.9
gb|CO362228.1|CO362228 RTK1_2_E06.b1_A029 Roots minus potas... 31 6.2
gb|DR159749.1|DR159749 RTFE1_1_G04.b1_A029 Roots minus iron... 31 6.2
gb|CF392242.1|CF392242 RTDR3_8_A09.g1_A022 Loblolly pine ro... 31 8.5
gb|DN610244.1|DN610244 EST963294 Subtracted pine embryo lib... 31 8.5
gb|DN612543.1|DN612543 EST965593 Subtracted pine embryo lib... 31 8.5
gb|DR689010.1|DR689010 EST1079096 Normalized pine embryo li... 31 8.5
>gb|DR100903.1|DR100903 STRR1_69_D08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_69_D08_A033 3', mRNA sequence
Length = 798
Score = 60.2 bits (125), Expect(2) = 3e-020
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +1 / -1
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
+++ F R R +E + W + +EP S++RI V + T+LDD++D++ E + +T
Sbjct: 666 AQVNFYRRRHMELYFWAVICIFEPELSQSRIAFAKVTTVGTVLDDLYDTYGMLDELKTIT 487
Query: 493 NCIESWDPKGAQDLPGCMKFALE 561
+ WD DLP +K A++
Sbjct: 486 EGVRRWDISLIDDLPEKIKIAIQ 418
Score = 57.9 bits (120), Expect(2) = 3e-020
Identities = 19/35 (54%), Positives = 29/35 (82%)
Frame = +1 / -1
Query: 205 HEKVLQLAKLNSNVLQLHHQQELKILTRWWEDMQI 309
H+KVL+LAKL+ N+LQ HQ+E++ +TRWW D ++
Sbjct: 771 HQKVLELAKLDFNILQCIHQKEMQYITRWWRDSEV 667
>gb|DR389112.1|DR389112 RTHG1_32_B06.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_32_B06_A029 5', mRNA sequence
Length = 610
Score = 74.4 bits (156), Expect(2) = 6e-020
Identities = 28/77 (36%), Positives = 45/77 (58%)
Frame = +1 / +2
Query: 319 LPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNC 498
LPF R+R VECF + YEP +++ R + + V + T+LDD++D++ T E ++ T
Sbjct: 347 LPFGRERPVECFFIVAAGTYEPHYAKCRFLFSKVACLNTVLDDMYDTYGTLDELKLFTEA 526
Query: 499 IESWDPKGAQDLPGCMK 549
+ WD + LP MK
Sbjct: 527 VRRWDLSLTESLPDYMK 577
Score = 42.8 bits (87), Expect(2) = 6e-020
Identities = 15/38 (39%), Positives = 28/38 (73%)
Frame = +1 / +2
Query: 184 YETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWE 297
Y+ ++K+L+LAKL+ N++Q HQ+E+K +T W++
Sbjct: 215 YKLPRVNNQKILELAKLDFNIIQAIHQKEMKNVTTWFK 328
>gb|CO176238.1|CO176238 NDL1_60_E11.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_60_E11_A029 5', mRNA sequence
Length = 830
Score = 62.0 bits (129), Expect(2) = 8e-020
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +1 / +1
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
+++ F R R +E + W + +EP S++RI V + T+LDD++D++ E + +T
Sbjct: 163 AQVNFYRRRHMELYFWAVICIFEPEFSQSRIAFAKVTTVGTVLDDLYDTYGMLDELKTIT 342
Query: 493 NCIESWDPKGAQDLPGCMKFALE 561
+ WD DLP +K A++
Sbjct: 343 EGVRRWDISLIDDLPAKIKIAIQ 411
Score = 54.7 bits (113), Expect(2) = 8e-020
Identities = 18/35 (51%), Positives = 29/35 (82%)
Frame = +1 / +1
Query: 205 HEKVLQLAKLNSNVLQLHHQQELKILTRWWEDMQI 309
++KVL+LAKL+ N+LQ HQ+E++ +TRWW D ++
Sbjct: 58 NQKVLELAKLDFNILQCIHQKEMQYITRWWRDSEV 162
>gb|DR099807.1|DR099807 STRR1_58_F02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_58_F02_A033 5', mRNA sequence
Length = 718
Score = 74.4 bits (156), Expect(2) = 8e-020
Identities = 28/77 (36%), Positives = 45/77 (58%)
Frame = +1 / +2
Query: 319 LPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNC 498
LPF R+R VECF + YEP +++ R + + V + T+LDD++D++ T E ++ T
Sbjct: 347 LPFGRERPVECFFIVAAGTYEPQYAKCRFLFSKVACLNTVLDDMYDTYGTLDELKLFTEA 526
Query: 499 IESWDPKGAQDLPGCMK 549
+ WD + LP MK
Sbjct: 527 VRRWDLSLTESLPDYMK 577
Score = 42.3 bits (86), Expect(2) = 8e-020
Identities = 15/38 (39%), Positives = 28/38 (73%)
Frame = +1 / +2
Query: 184 YETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWE 297
Y+ ++K+L+LAKL+ N++Q HQ+E+K +T W++
Sbjct: 215 YKLPRVNNQKILELAKLDFNIIQKIHQKEMKNVTTWFK 328
>gb|CO175587.1|CO175587 NDL1_55_E07.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_55_E07_A029 5', mRNA sequence
Length = 621
Score = 62.0 bits (129), Expect(2) = 8e-020
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +1 / +1
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
+++ F R R +E + W + +EP S++RI V + T+LDD++D++ E + +T
Sbjct: 247 AQVNFYRRRHMELYFWAVICIFEPEFSQSRIAFAKVTTVGTVLDDLYDTYGMLDELKTIT 426
Query: 493 NCIESWDPKGAQDLPGCMKFALE 561
+ WD DLP +K A++
Sbjct: 427 EGVRRWDISLIDDLPAKIKIAIQ 495
Score = 54.7 bits (113), Expect(2) = 8e-020
Identities = 18/35 (51%), Positives = 29/35 (82%)
Frame = +1 / +1
Query: 205 HEKVLQLAKLNSNVLQLHHQQELKILTRWWEDMQI 309
++KVL+LAKL+ N+LQ HQ+E++ +TRWW D ++
Sbjct: 142 NQKVLELAKLDFNILQCIHQKEMQYITRWWRDSEV 246
>gb|DR742219.1|DR742219 RTCU1_2_C07.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_2_C07_A029 5', mRNA sequence
Length = 792
Score = 68.0 bits (142), Expect(2) = 1e-019
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = +1 / +1
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
FAR+R +E + I YEP +++ R + T V + T+LDD++D++ T E ++ T +
Sbjct: 238 FARERPLEFYFLIAAGTYEPQYAKCRFLFTKVACLQTVLDDMYDTYGTLDELKLFTEAVR 417
Query: 505 SWDPKGAQDLPGCMKFALEKILD 573
WD ++LP MK + D
Sbjct: 418 RWDLSYTENLPDYMKLCYKIYYD 486
Score = 48.3 bits (99), Expect(2) = 1e-019
Identities = 18/39 (46%), Positives = 30/39 (76%)
Frame = +1 / +1
Query: 184 YETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
Y+ S +EK+L+LAKL+ N++Q HQ+E+K +T W++D
Sbjct: 100 YKLSHVNNEKLLELAKLDFNIVQSIHQEEMKSVTSWFKD 216
Score = 33.6 bits (67), Expect = 1.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -1 / -1
Query: 549 FHATWEVLSPFGIPAFDAISEYFTFLWGRERIENIVQECHDGDNHCQ 409
FH W+V +P+ D++SE F+ G + +IVQ + C+
Sbjct: 462 FHIIWKVFRIREVPSSDSLSEQLQFIKGPISVIHIVQNSLQARHFCK 322
>gb|CF397293.1|CF397293 RTDS3_2_A09.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_2_A09_A022 5', mRNA sequence
Length = 725
Score = 68.0 bits (142), Expect(2) = 1e-019
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = +1 / +1
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
FAR+R +E + I YEP +++ R + T V + T+LDD++D++ T E ++ T +
Sbjct: 244 FARERPLEFYFLIAAGTYEPQYAKCRFLFTKVACLQTVLDDMYDTYGTLDELKLFTEAVR 423
Query: 505 SWDPKGAQDLPGCMKFALEKILD 573
WD ++LP MK + D
Sbjct: 424 RWDLSYTENLPDYMKLCYKIYYD 492
Score = 48.3 bits (99), Expect(2) = 1e-019
Identities = 18/39 (46%), Positives = 30/39 (76%)
Frame = +1 / +1
Query: 184 YETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
Y+ S +EK+L+LAKL+ N++Q HQ+E+K +T W++D
Sbjct: 106 YKLSHVNNEKLLELAKLDFNIVQSIHQEEMKSVTSWFKD 222
Score = 31.3 bits (62), Expect = 6.2
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -1 / -3
Query: 546 HATWEVLSPFGIPAFDAISEYFTFLWGRERIENIVQECHDGDNHCQ 409
H W+V +P+ D++SE F+ G + +IVQ + C+
Sbjct: 465 HIVWKVFRIREVPSSDSLSEQLQFIEGPISVIHIVQNSLQARHFCK 328
>gb|CF397946.1|CF397946 RTDS3_23_G06.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_23_G06_A022 5', mRNA sequence
Length = 634
Score = 68.0 bits (142), Expect(2) = 1e-019
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = +1 / +2
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
FAR+R +E + I YEP +++ R + T V + T+LDD++D++ T E ++ T +
Sbjct: 173 FARERPLEFYFLIAAGTYEPQYAKCRFLFTKVACLQTVLDDMYDTYGTLDELKLFTEAVR 352
Query: 505 SWDPKGAQDLPGCMKFALEKILD 573
WD ++LP MK + D
Sbjct: 353 RWDLSYTENLPDYMKLCYKIYYD 421
Score = 48.3 bits (99), Expect(2) = 1e-019
Identities = 18/39 (46%), Positives = 30/39 (76%)
Frame = +1 / +2
Query: 184 YETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
Y+ S +EK+L+LAKL+ N++Q HQ+E+K +T W++D
Sbjct: 35 YKLSHVNNEKLLELAKLDFNIVQSIHQEEMKSVTSWFKD 151
Score = 31.3 bits (62), Expect = 6.2
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -1 / -1
Query: 546 HATWEVLSPFGIPAFDAISEYFTFLWGRERIENIVQECHDGDNHCQ 409
H W+V +P+ D++SE F+ G + +IVQ + C+
Sbjct: 394 HIVWKVFRIREVPSSDSLSEQLQFIEGPISVIHIVQNSLQARHFCK 257
>gb|DR049988.1|DR049988 RTBOR1_20_B07.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_20_B07_A029 5', mRNA sequence
Length = 553
Score = 68.0 bits (142), Expect(2) = 1e-019
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = +1 / +2
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
FAR+R +E + I YEP +++ R + T V + T+LDD++D++ T E ++ T +
Sbjct: 227 FARERPLEFYFLIAAGTYEPQYAKCRFLFTKVACLQTVLDDMYDTYGTLDELKLFTEAVR 406
Query: 505 SWDPKGAQDLPGCMKFALEKILD 573
WD ++LP MK + D
Sbjct: 407 RWDLSYTENLPDYMKLCYKIYYD 475
Score = 48.3 bits (99), Expect(2) = 1e-019
Identities = 18/39 (46%), Positives = 30/39 (76%)
Frame = +1 / +2
Query: 184 YETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
Y+ S +EK+L+LAKL+ N++Q HQ+E+K +T W++D
Sbjct: 89 YKLSHVNNEKLLELAKLDFNIVQSIHQEEMKSVTSWFKD 205
Score = 31.3 bits (62), Expect = 6.2
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -1 / -1
Query: 546 HATWEVLSPFGIPAFDAISEYFTFLWGRERIENIVQECHDGDNHCQ 409
H W+V +P+ D++SE F+ G + +IVQ + C+
Sbjct: 448 HIVWKVFRIREVPSSDSLSEQLQFIEGPISVIHIVQNSLQARHFCK 311
>gb|DR167553.1|DR167553 RTPHOS1_19_C04.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_19_C04_A029 5', mRNA sequence
Length = 832
Score = 60.2 bits (125), Expect(2) = 1e-019
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +1 / +3
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
+++ F R R +E + W + +EP S++RI V + T+LDD++D++ E + +T
Sbjct: 138 AQVNFYRRRHMELYFWAVICIFEPELSQSRIAFAKVTTVGTVLDDLYDTYGMLDELKTIT 317
Query: 493 NCIESWDPKGAQDLPGCMKFALE 561
+ WD DLP +K A++
Sbjct: 318 EGVRRWDISLIDDLPEKIKIAIQ 386
Score = 55.6 bits (115), Expect(2) = 1e-019
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +1 / +3
Query: 181 AYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWEDMQI 309
++ ++KVL+LAKL+ N+LQ HQ+E++ +TRWW D ++
Sbjct: 9 SFVAQSNFNQKVLELAKLDFNILQCIHQKEMQYITRWWRDSEV 137
>gb|DR020981.1|DR020981 STRS1_40_C10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_40_C10_A034 5', mRNA sequence
Length = 619
Score = 61.1 bits (127), Expect(2) = 1e-019
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +1 / +3
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
+++ F R R +E + W + +EP S++RI V + T+LDD++D++ E + +T
Sbjct: 141 AQVNFYRRRHMELYFWAVICIFEPEFSQSRIAFAKVTTVGTVLDDLYDTYGMLDELKTIT 320
Query: 493 NCIESWDPKGAQDLPGCMKFALE 561
+ WD DLP +K A++
Sbjct: 321 EGVGRWDISLIDDLPAKIKIAIQ 389
Score = 54.7 bits (113), Expect(2) = 1e-019
Identities = 18/35 (51%), Positives = 29/35 (82%)
Frame = +1 / +3
Query: 205 HEKVLQLAKLNSNVLQLHHQQELKILTRWWEDMQI 309
++KVL+LAKL+ N+LQ HQ+E++ +TRWW D ++
Sbjct: 36 NQKVLELAKLDFNILQCIHQKEMQYITRWWRDSEV 140
>gb|AW043070.1|AW043070 ST28H10 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST28H10, mRNA sequence
Length = 601
Score = 62.0 bits (129), Expect(2) = 2e-019
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +1 / +3
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
+++ F R R +E + W + +EP S++RI V + T+LDD++D++ E + +T
Sbjct: 171 AQVNFYRRRHMELYFWAVICIFEPEFSQSRIAFAKVTTVGTVLDDLYDTYGMLDELKTIT 350
Query: 493 NCIESWDPKGAQDLPGCMKFALE 561
+ WD DLP +K A++
Sbjct: 351 EGVRRWDISLIDDLPAKIKIAIQ 419
Score = 53.3 bits (110), Expect(2) = 2e-019
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +1 / +3
Query: 211 KVLQLAKLNSNVLQLHHQQELKILTRWWEDMQI 309
KVL+LAKL+ N+LQ HQ+E++ +TRWW D ++
Sbjct: 72 KVLELAKLDFNILQCIHQKEMQYITRWWRDSEV 170
>gb|CF470471.1|CF470471 RTDS1_17_C03.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_17_C03_A015 5', mRNA sequence
Length = 725
Score = 69.3 bits (145), Expect(2) = 4e-019
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = +1 / +1
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
FAR+R +E + I YEP +++ R + T V ++T+LDD++D++ T E ++ T +
Sbjct: 157 FARERPLEFYFLIAAGTYEPQYAKCRFLFTKVACLLTVLDDMYDTYGTLDELKLFTEAVR 336
Query: 505 SWDPKGAQDLPGCMKFALEKILD 573
WD ++LP MK + D
Sbjct: 337 RWDLSYTENLPDYMKLCYKIYYD 405
Score = 45.1 bits (92), Expect(2) = 4e-019
Identities = 16/32 (50%), Positives = 27/32 (84%)
Frame = +1 / +1
Query: 205 HEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
+EK+L+LAKL+ N++Q HQ+E+K +T W++D
Sbjct: 40 NEKLLELAKLDFNIVQSIHQEEMKNVTSWFKD 135
Score = 30.9 bits (61), Expect = 8.5
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -1 / -3
Query: 549 FHATWEVLSPFGIPAFDAISEYFTFLWGRERIENIVQECHDGDNHCQ 409
FH W+V +P+ +SE F+ G + +IVQ + C+
Sbjct: 381 FHIVWKVFCIREVPSSHGLSEQLQFIKGPISVIHIVQNSQQTRHFCK 241
>dbj|BD273021.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 488
Score = 64.8 bits (135), Expect(2) = 5e-019
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +1 / +1
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
S+L F R R VE + + EP HS R+ + +LDDI+D+F T +E E+ T
Sbjct: 202 SRLTFTRHRHVEFYTLASCIATEPKHSAFRLGFAKTCYLGIVLDDIYDTFGTMEELELFT 381
Query: 493 NCIESWDPKGAQDLPGCMK 549
I+ WDP + LP MK
Sbjct: 382 AAIKRWDPSARECLPEYMK 438
Score = 49.2 bits (101), Expect(2) = 5e-019
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +1 / +1
Query: 190 TSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
T+ T+ EK+L+LAKL N+ Q+ELK L+RWW+D
Sbjct: 82 TTTTMTEKLLELAKLEFNIFHSLQQKELKQLSRWWKD 192
>gb|CO364204.1|CO364204 RTK1_14_G09.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_14_G09_A029 3', mRNA sequence
Length = 836
Score = 68.0 bits (142), Expect(2) = 9e-019
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = +1 / +2
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F+R R VE + + +P HS R+ + ++T+LDDI+D+F T +E E+LT
Sbjct: 434 EITFSRHRHVEYYTLAACIANDPKHSAFRLGFGKISHMITILDDIYDTFGTMEELELLTA 613
Query: 496 CIESWDPKGAQDLPGCMKFALEKILDS 576
+ WDP + LP MK + D+
Sbjct: 614 AFKRWDPSSIECLPDYMKGVYMAVYDN 694
Score = 45.1 bits (92), Expect(2) = 9e-019
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +1 / +2
Query: 184 YETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
+ET + EK+L+LAKL N+ ++EL+ L+RWW+D
Sbjct: 305 FETPYLIREKLLELAKLEFNIFHSLVKRELQSLSRWWKD 421
>dbj|BD273050.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 1173
Score = 68.0 bits (142), Expect(2) = 2e-018
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = +1 / +3
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F+R R VE + + +P HS R+ + ++T+LDDI+D+F T +E E+LT
Sbjct: 159 EITFSRHRHVEYYTLAACIANDPKHSAFRLGFGKISHMITILDDIYDTFGTMEELELLTA 338
Query: 496 CIESWDPKGAQDLPGCMKFALEKILDS 576
+ WDP + LP MK + D+
Sbjct: 339 AFKRWDPSSIECLPDYMKGVYMAVYDN 419
Score = 44.1 bits (90), Expect(2) = 2e-018
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +1 / +3
Query: 184 YETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
+ET + EK+L+LAKL N+ ++EL+ L RWW+D
Sbjct: 30 FETPYLIREKLLELAKLEFNIFHSLVKRELQSLLRWWKD 146
>gb|AF543530.1| Pinus taeda (+)-alpha-pinene synthase mRNA, complete cds
Length = 2100
Score = 66.1 bits (138), Expect(2) = 3e-018
Identities = 28/87 (32%), Positives = 48/87 (55%)
Frame = +1 / +1
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F+R R VE + + +P HS R+ + ++T+LDDI+D+F T +E ++LT
Sbjct: 1009 EITFSRHRHVEYYTLAACIANDPKHSAFRLGFGKISHMITILDDIYDTFGTMEELKLLTA 1188
Query: 496 CIESWDPKGAQDLPGCMKFALEKILDS 576
+ WDP + LP MK + D+
Sbjct: 1189 AFKRWDPSSIECLPDYMKGVYMAVYDN 1269
Score = 45.1 bits (92), Expect(2) = 3e-018
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +1 / +1
Query: 184 YETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
+ET + EK+L+LAKL N+ ++EL+ L+RWW+D
Sbjct: 880 FETPYLIREKLLELAKLEFNIFHSLVKRELQSLSRWWKD 996
>gb|DR101942.1|DR101942 STRR1_76_G12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_76_G12_A033 5', mRNA sequence
Length = 722
Score = 56.1 bits (116), Expect(2) = 4e-018
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +1 / +2
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
+++ F R R +E + W + +EP S++RI V + T+LDD++D++ E + +T
Sbjct: 497 AQVNFYRRRHMELYFWAVICIFEPELSQSRIAFAKVTTVGTVLDDLYDTYGMLDELKTIT 676
Query: 493 NCIESWDPKGAQDLP 537
+ WD DLP
Sbjct: 677 EGVRRWDISLIDDLP 721
Score = 54.7 bits (113), Expect(2) = 4e-018
Identities = 18/35 (51%), Positives = 29/35 (82%)
Frame = +1 / +2
Query: 205 HEKVLQLAKLNSNVLQLHHQQELKILTRWWEDMQI 309
++KVL+LAKL+ N+LQ HQ+E++ +TRWW D ++
Sbjct: 392 NQKVLELAKLDFNILQCIHQKEMQYITRWWRDSEV 496
>gb|CF663845.1|CF663845 RTCNT1_5_B08.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_5_B08_A029 5', mRNA sequence
Length = 616
Score = 64.3 bits (134), Expect(2) = 8e-018
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +1 / +3
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
S+L F R R VE + + EP HS R+ + +LDDI+D+F T +E E+ T
Sbjct: 132 SQLTFTRHRHVEFYTLASCIATEPKHSAFRLGFAKTCYLGIVLDDIYDTFGTMEELELFT 311
Query: 493 NCIESWDPKGAQDLPGCMK 549
I+ WDP + LP MK
Sbjct: 312 AAIKRWDPSAREFLPEYMK 368
Score = 45.5 bits (93), Expect(2) = 8e-018
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +1 / +3
Query: 199 TLHEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
T EK+L+LAKL N+ Q+ELK L+RWW+D
Sbjct: 21 TKTEKLLELAKLEFNIFHSLQQKELKQLSRWWKD 122
>gb|DR093344.1|DR093344 STRR1_7_D12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_7_D12_A033 5', mRNA sequence
Length = 847
Score = 68.9 bits (144), Expect(2) = 1e-017
Identities = 29/78 (37%), Positives = 44/78 (56%)
Frame = +1 / +3
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F R R VE + + +EP HS R+ I+T+LDD++D+F T E E+ T+
Sbjct: 186 QMTFCRHRHVEYYTLASCIAFEPQHSGFRLGFAKACHIITVLDDMYDTFGTLDELELFTS 365
Query: 496 CIESWDPKGAQDLPGCMK 549
I+ WDP + LP MK
Sbjct: 366 AIKRWDPSATECLPEYMK 419
Score = 40.5 bits (82), Expect(2) = 1e-017
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1 / +3
Query: 181 AYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWE 297
A+ S EK+L+LAKL N+ ++EL+ L RWW+
Sbjct: 54 AFSKSYMKTEKLLELAKLEFNIFHALQKRELEYLVRWWK 170
>gb|AF543527.1| Pinus taeda (-)-alpha-pinene synthase mRNA, complete cds
Length = 2082
Score = 68.9 bits (144), Expect(2) = 2e-017
Identities = 29/78 (37%), Positives = 44/78 (56%)
Frame = +1 / +2
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F R R VE + + +EP HS R+ I+T+LDD++D+F T E E+ T+
Sbjct: 1043 QMTFCRHRHVEYYTLASCIAFEPQHSGFRLGFAKACHIITVLDDMYDTFGTLDELELFTS 1222
Query: 496 CIESWDPKGAQDLPGCMK 549
I+ WDP + LP MK
Sbjct: 1223 AIKRWDPSATECLPEYMK 1276
Score = 39.6 bits (80), Expect(2) = 2e-017
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1 / +2
Query: 208 EKVLQLAKLNSNVLQLHHQQELKILTRWWE 297
EK+L+LAKL N+ ++EL+ L RWW+
Sbjct: 938 EKLLELAKLEFNIFHALQKRELEYLVRWWK 1027
>gb|DR093306.1|DR093306 STRR1_7_A05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_7_A05_A033 5', mRNA sequence
Length = 871
Score = 68.9 bits (144), Expect(2) = 2e-017
Identities = 29/78 (37%), Positives = 44/78 (56%)
Frame = +1 / +3
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F R R VE + + +EP HS R+ I+T+LDD++D+F T E E+ T+
Sbjct: 231 QMTFCRHRHVEYYTLASCIAFEPQHSGFRLGFAKACHIITVLDDMYDTFGTLDELELFTS 410
Query: 496 CIESWDPKGAQDLPGCMK 549
I+ WDP + LP MK
Sbjct: 411 AIKRWDPSATECLPEYMK 464
Score = 39.6 bits (80), Expect(2) = 2e-017
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1 / +3
Query: 208 EKVLQLAKLNSNVLQLHHQQELKILTRWWE 297
EK+L+LAKL N+ ++EL+ L RWW+
Sbjct: 126 EKLLELAKLEFNIFHALQKRELEYLVRWWK 215
>gb|DR023983.1|DR023983 STRS1_61_B07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_61_B07_A034 5', mRNA sequence
Length = 857
Score = 68.9 bits (144), Expect(2) = 2e-017
Identities = 29/78 (37%), Positives = 44/78 (56%)
Frame = +1 / +2
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F R R VE + + +EP HS R+ I+T+LDD++D+F T E E+ T+
Sbjct: 128 QMTFCRHRHVEYYTLASCIAFEPQHSGFRLGFAKACHIITVLDDMYDTFGTLDELELFTS 307
Query: 496 CIESWDPKGAQDLPGCMK 549
I+ WDP + LP MK
Sbjct: 308 AIKRWDPSATECLPEYMK 361
Score = 39.6 bits (80), Expect(2) = 2e-017
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1 / +2
Query: 208 EKVLQLAKLNSNVLQLHHQQELKILTRWWE 297
EK+L+LAKL N+ ++EL+ L RWW+
Sbjct: 23 EKLLELAKLEFNIFHALQKRELEYLVRWWK 112
>gb|CO176090.1|CO176090 NDL1_59_D02.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_59_D02_A029 5', mRNA sequence
Length = 734
Score = 65.2 bits (136), Expect(2) = 4e-017
Identities = 28/79 (35%), Positives = 43/79 (54%)
Frame = +1 / +3
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
S L F R VE + + + +P HS R+ + + T+LDDI+D++ T +E E+ T
Sbjct: 357 SHLAFTRHIPVEYYTFASCIASDPKHSAFRLGFAKLCQLATVLDDIYDTYGTMEELELFT 536
Query: 493 NCIESWDPKGAQDLPGCMK 549
+ I+ WDP LP MK
Sbjct: 537 SAIKRWDPSSIDSLPEYMK 593
Score = 42.3 bits (86), Expect(2) = 4e-017
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +1 / +3
Query: 160 ESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWE 297
E++ Y+ + +K+L+LAK+ N+ ++EL+ L+RWW+
Sbjct: 207 EARMYMEVFPQDTIYEKKLLELAKMEFNIFHSLQRRELQCLSRWWK 344
>gb|CV031792.1|CV031792 RTNACL1_3_E12.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_3_E12_A029 5', mRNA sequence
Length = 827
Score = 66.1 bits (138), Expect(2) = 7e-017
Identities = 28/87 (32%), Positives = 48/87 (55%)
Frame = +1 / +1
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F+R R VE + + +P HS R+ + ++T+LDDI+D+F T +E ++LT
Sbjct: 133 EITFSRHRHVEYYTLAACIANDPKHSAFRLGFGKISHMITILDDIYDTFGTMEELKLLTA 312
Query: 496 CIESWDPKGAQDLPGCMKFALEKILDS 576
+ WDP + LP MK + D+
Sbjct: 313 AFKRWDPSSIECLPDYMKGVYMAVYDN 393
Score = 40.5 bits (82), Expect(2) = 7e-017
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1 / +1
Query: 202 LHEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
+ EK+L LAKL N+ ++EL+ L+RWW+D
Sbjct: 22 IREKLLDLAKLEFNIFHSLVKRELQSLSRWWKD 120
>gb|DR110543.1|DR110543 RTS1_11_B06.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_11_B06_A029 5', mRNA sequence
Length = 848
Score = 64.3 bits (134), Expect(2) = 1e-016
Identities = 29/86 (33%), Positives = 43/86 (50%)
Frame = +1 / +3
Query: 292 WEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATP 471
W + ++ F R R VE + + +EP HS R+ I+T+LDD++D F T
Sbjct: 315 WWNDSGSPQITFTRHRHVEYYTLASCIAFEPQHSGFRLGFAKACHIITVLDDMYDLFGTV 494
Query: 472 QECEILTNCIESWDPKGAQDLPGCMK 549
E ++ T I+ WDP LP MK
Sbjct: 495 DELKLFTAAIKRWDPSATDCLPQYMK 572
Score = 41.8 bits (85), Expect(2) = 1e-016
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1 / +3
Query: 208 EKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
EK+L+LAKL N+ Q + EL+ L RWW D
Sbjct: 234 EKLLELAKLEFNIFQSIQKTELESLLRWWND 326
>gb|CO363234.1|CO363234 RTK1_8_B04.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_8_B04_A029 5', mRNA sequence
Length = 823
Score = 64.3 bits (134), Expect(2) = 1e-016
Identities = 29/86 (33%), Positives = 43/86 (50%)
Frame = +1 / +2
Query: 292 WEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATP 471
W + ++ F R R VE + + +EP HS R+ I+T+LDD++D F T
Sbjct: 224 WWNDSGSPQITFTRHRHVEYYTLASCIAFEPQHSGFRLGFAKACHIITVLDDMYDLFGTV 403
Query: 472 QECEILTNCIESWDPKGAQDLPGCMK 549
E ++ T I+ WDP LP MK
Sbjct: 404 DELKLFTAAIKRWDPSATDCLPQYMK 481
Score = 41.8 bits (85), Expect(2) = 1e-016
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1 / +2
Query: 208 EKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
EK+L+LAKL N+ Q + EL+ L RWW D
Sbjct: 143 EKLLELAKLEFNIFQSIQKTELESLLRWWND 235
>gb|AF543529.1| Pinus taeda alpha-terpineol synthase mRNA, complete cds
Length = 2162
Score = 63.4 bits (132), Expect(2) = 2e-016
Identities = 29/86 (33%), Positives = 43/86 (50%)
Frame = +1 / +2
Query: 292 WEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATP 471
W + ++ F R R VE + + +EP HS R+ I+T+LDD++D F T
Sbjct: 1040 WWNDSGSPQITFTRHRHVEYYTLASCIAFEPQHSGFRLGFAKACHILTVLDDMYDLFGTV 1219
Query: 472 QECEILTNCIESWDPKGAQDLPGCMK 549
E ++ T I+ WDP LP MK
Sbjct: 1220 DELKLFTAAIKRWDPSATDCLPQYMK 1297
Score = 41.8 bits (85), Expect(2) = 2e-016
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1 / +2
Query: 208 EKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
EK+L+LAKL N+ Q + EL+ L RWW D
Sbjct: 959 EKLLELAKLEFNIFQSIQKTELESLLRWWND 1051
>dbj|BD273051.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 1634
Score = 64.8 bits (135), Expect(2) = 5e-016
Identities = 26/78 (33%), Positives = 41/78 (52%)
Frame = +1 / +1
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
+L F R R VE + + G P H+ R+ ++T+LDD++D+F T E + T
Sbjct: 511 ELTFVRHRYVEFYTLVSGTDMVPEHAAFRLSFVKTCHLITILDDMYDTFGTIDELRLFTA 690
Query: 496 CIESWDPKGAQDLPGCMK 549
++ WDP + LP MK
Sbjct: 691 AVKRWDPSATECLPEYMK 744
Score = 39.1 bits (79), Expect(2) = 5e-016
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1 / +1
Query: 208 EKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
+K+L+LAKL N+ Q+EL+ L RWW++
Sbjct: 406 KKLLELAKLEFNIFHSLQQKELQCLWRWWKE 498
>dbj|BD272958.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 1513
Score = 64.8 bits (135), Expect(2) = 5e-016
Identities = 26/78 (33%), Positives = 41/78 (52%)
Frame = +1 / +1
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
+L F R R VE + + G P H+ R+ ++T+LDD++D+F T E + T
Sbjct: 511 ELTFVRHRYVEFYTLVSGTDMVPEHAAFRLSFVKTCHLITILDDMYDTFGTIDELRLFTA 690
Query: 496 CIESWDPKGAQDLPGCMK 549
++ WDP + LP MK
Sbjct: 691 AVKRWDPSATECLPEYMK 744
Score = 39.1 bits (79), Expect(2) = 5e-016
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1 / +1
Query: 208 EKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
+K+L+LAKL N+ Q+EL+ L RWW++
Sbjct: 406 KKLLELAKLEFNIFHSLQQKELQCLWRWWKE 498
>dbj|BD273020.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 426
Score = 57.9 bits (120), Expect(2) = 7e-016
Identities = 26/72 (36%), Positives = 38/72 (52%)
Frame = +1 / +2
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
S+L F R R VE + + EP HS R+ + +LDDI+D+F T +E E+ T
Sbjct: 206 SQLTFTRHRHVEFYTLASCIATEPKHSAFRLGFAKTCYLGIVLDDIYDTFGTMEELELFT 385
Query: 493 NCIESWDPKGAQ 528
I+ WDP +
Sbjct: 386 AAIKRWDPSARE 421
Score = 45.5 bits (93), Expect(2) = 7e-016
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +1 / +2
Query: 199 TLHEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
T EK+L+LAKL N+ Q+ELK L+RWW+D
Sbjct: 95 TKTEKLLELAKLEFNIFHSLQQKELKQLSRWWKD 196
>gb|DR017965.1|DR017965 STRS1_19_D07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_19_D07_A034 5', mRNA sequence
Length = 803
Score = 68.0 bits (142), Expect(2) = 2e-015
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = +1 / +3
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F+R R VE + + +P HS R+ + ++T+LDDI+D+F T +E E+LT
Sbjct: 96 EITFSRHRHVEYYTLAACIANDPKHSAFRLGFGKISHMITILDDIYDTFGTMEELELLTA 275
Query: 496 CIESWDPKGAQDLPGCMKFALEKILDS 576
+ WDP + LP MK + D+
Sbjct: 276 AFKRWDPSSIECLPDYMKGVYMAVYDN 356
Score = 33.6 bits (67), Expect(2) = 2e-015
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1 / +3
Query: 220 QLAKLNSNVLQLHHQQELKILTRWWED 300
+LAKL N+ ++EL+ L+RWW+D
Sbjct: 3 ELAKLEFNIFHSLVKRELQSLSRWWKD 83
>gb|DR022742.1|DR022742 STRS1_53_D12.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_53_D12_A034 3', mRNA sequence
Length = 732
Score = 74.4 bits (156), Expect(2) = 3e-014
Identities = 28/77 (36%), Positives = 45/77 (58%)
Frame = +1 / -2
Query: 319 LPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNC 498
LPF R+R VECF + YEP +++ R + + V + T+LDD++D++ T E ++ T
Sbjct: 650 LPFGRERPVECFFIVAAGTYEPQYAKCRFLFSKVACLNTVLDDMYDTYGTLDELKLFTEA 471
Query: 499 IESWDPKGAQDLPGCMK 549
+ WD + LP MK
Sbjct: 470 VRRWDLSLTESLPDYMK 420
Score = 23.5 bits (45), Expect(2) = 3e-014
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +1 / -3
Query: 241 NVLQLHHQQELKILTRWW 294
+++Q HQ+E+K +T W+
Sbjct: 724 HIIQAIHQKEMKNVTIWF 671
>gb|AY779541.1| Pinus taeda diterpene synthase mRNA, complete cds
Length = 2553
Score = 53.8 bits (111), Expect(2) = 4e-014
Identities = 23/101 (22%), Positives = 45/101 (44%)
Frame = +1 / +1
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
R W + S+L F R+R+ E + +EP + R + T +LDD++D+
Sbjct: 1648 RRWWNSSGFSQLGFTRERVAEIYFSPASFLFEPEFATCRAVYTKTSNFTVILDDLYDAHG 1827
Query: 466 TPQECEILTNCIESWDPKGAQDLPGCMKFALEKILDSYQTI 588
T ++ + ++ WD +P MK + +++ I
Sbjct: 1828 TLDNLKLFSESVKRWDLSLVDQMPQDMKICFKGFYNTFNEI 1950
Score = 43.7 bits (89), Expect(2) = 4e-014
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +1 / +1
Query: 205 HEKVLQLAKLNSNVLQLHHQQELKILTRWW 294
+EK L+LAKL+ N +Q H+QEL+ + RWW
Sbjct: 1570 NEKYLELAKLDFNRVQFFHRQELQDIRRWW 1659
>gb|AF543528.1| Pinus taeda alpha-farnesene synthase mRNA, complete cds
Length = 2084
Score = 55.6 bits (115), Expect(2) = 4e-014
Identities = 26/79 (32%), Positives = 41/79 (51%)
Frame = +1 / +3
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
++L F R R VE + + EP HS R+ + + +LDDI+D++ +E E+ T
Sbjct: 894 AQLTFTRHRHVEFYTLASCIAMEPKHSAFRLGFAKLCYLGIVLDDIYDTYGKMEELELFT 1073
Query: 493 NCIESWDPKGAQDLPGCMK 549
I+ WD + LP MK
Sbjct: 1074 AAIKRWDTSTTECLPEYMK 1130
Score = 41.8 bits (85), Expect(2) = 4e-014
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1 / +3
Query: 208 EKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
EK+L+LAK+ N+ Q ELK L+RWW+D
Sbjct: 792 EKLLKLAKIEFNLFHSLQQTELKHLSRWWKD 884
>gb|AF543531.1| Pinus taeda monoterpene synthase-like protein mRNA, complete cds
Length = 1960
Score = 57.9 bits (120), Expect(2) = 4e-014
Identities = 28/87 (32%), Positives = 44/87 (50%)
Frame = +1 / +3
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
+L F R VE + + + +P S R+ + VT+LDDI+D++ T +E E+ T
Sbjct: 1047 QLSFTRHIHVEYYTFASCIATDPKQSAFRLGFAKMSYFVTVLDDIYDTYGTMEELELFTA 1226
Query: 496 CIESWDPKGAQDLPGCMKFALEKILDS 576
I+ WDP LP MK + D+
Sbjct: 1227 AIKRWDPSVVDCLPEYMKGVYMAVYDT 1307
Score = 39.6 bits (80), Expect(2) = 4e-014
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1 / +3
Query: 160 ESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWE 297
E++ Y+ + +K+++LAK+ N+ ++EL+ L RWW+
Sbjct: 894 EARMYMEVFPQDTIYEQKLVELAKVEFNIFHSLQKRELQSLCRWWK 1031
>gb|DR093466.1|DR093466 STRR1_8_A08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_8_A08_A033 5', mRNA sequence
Length = 874
Score = 53.8 bits (111), Expect(2) = 4e-014
Identities = 23/101 (22%), Positives = 45/101 (44%)
Frame = +1 / +3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
R W + S+L F R+R+ E + +EP + R + T +LDD++D+
Sbjct: 270 RRWWNSSGFSQLGFTRERVAEIYFSPASFLFEPEFATCRAVYTKTSNFTVILDDLYDAHG 449
Query: 466 TPQECEILTNCIESWDPKGAQDLPGCMKFALEKILDSYQTI 588
T ++ + ++ WD +P MK + +++ I
Sbjct: 450 TLDNLKLFSESVKRWDLSLVDQMPQDMKICFKGFYNTFNEI 572
Score = 43.7 bits (89), Expect(2) = 4e-014
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +1 / +3
Query: 205 HEKVLQLAKLNSNVLQLHHQQELKILTRWW 294
+EK L+LAKL+ N +Q H+QEL+ + RWW
Sbjct: 192 NEKYLELAKLDFNRVQFFHRQELQDIRRWW 281
>gb|DR161260.1|DR161260 RTFE1_10_F09.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_10_F09_A029 5', mRNA sequence
Length = 804
Score = 53.8 bits (111), Expect(2) = 4e-014
Identities = 23/101 (22%), Positives = 45/101 (44%)
Frame = +1 / +3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
R W + S+L F R+R+ E + +EP + R + T +LDD++D+
Sbjct: 300 RRWWNSSGFSQLGFTRERVAEIYFSPASFLFEPEFATCRAVYTKTSNFTVILDDLYDAHG 479
Query: 466 TPQECEILTNCIESWDPKGAQDLPGCMKFALEKILDSYQTI 588
T ++ + ++ WD +P MK + +++ I
Sbjct: 480 TLDNLKLFSESVKRWDLSLVDQMPQDMKICFKGFYNTFNEI 602
Score = 43.7 bits (89), Expect(2) = 4e-014
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +1 / +3
Query: 205 HEKVLQLAKLNSNVLQLHHQQELKILTRWW 294
+EK L+LAKL+ N +Q H+QEL+ + RWW
Sbjct: 222 NEKYLELAKLDFNRVQFFHRQELQDIRRWW 311
>gb|CF475347.1|CF475347 RTWW2_13_C12.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_13_C12_A021 5', mRNA sequence
Length = 641
Score = 52.8 bits (109), Expect(2) = 4e-014
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +1 / +3
Query: 331 RDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESW 510
R+R+ E + +EP + R + T LLDD++D T + T ++ W
Sbjct: 378 RERVAEIYFSAASFLFEPEFATCRAVYTKTAIFTVLLDDLYDKHETLDNLNLFTESVKRW 557
Query: 511 DPKGAQDLPGCMKFALEKILDSYQTI 588
D +P MK L+ D++ I
Sbjct: 558 DLSLVDQMPQDMKTCLKGFYDTFNEI 635
Score = 44.6 bits (91), Expect(2) = 4e-014
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +1 / +3
Query: 184 YETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWW 294
Y +EK L+LAKL+ N LQ H+QEL+ + RWW
Sbjct: 231 YLMPNVFNEKYLELAKLDFNRLQALHRQELQDIRRWW 341
>gb|DR016212.1|DR016212 STRS1_8_C07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_8_C07_A034 5', mRNA sequence
Length = 846
Score = 51.0 bits (105), Expect(2) = 1e-013
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = +1 / +3
Query: 214 VLQLAKLNSNVLQLHHQQELKILTRWWEDMQI 309
VL+LAKL+ N+LQ HQ+E++ +TRWW D ++
Sbjct: 3 VLELAKLDFNILQCIHQKEMQYITRWWRDSEV 98
Score = 44.6 bits (91), Expect(2) = 1e-013
Identities = 18/60 (30%), Positives = 35/60 (58%)
Frame = +1 / +3
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
+++ F R R +E + W + +EP S++RI V + T+LDD++D++ E + +T
Sbjct: 99 AQVNFYRRRHMELYFWAVICIFEPELSQSRIAFAKVTTVGTVLDDLYDTYGMLDELKTIT 278
>gb|CO366907.1|CO366907 RTK1_30_H07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_30_H07_A029 5', mRNA sequence
Length = 638
Score = 49.6 bits (102), Expect(2) = 2e-013
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +1 / +2
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
++ F+R R VE + + +P HS R+ + ++T+LDDI+D+F T +E E+LT
Sbjct: 461 EITFSRHRHVEYYTLAACIANDPKHSAFRL*FGKISHMITILDDIYDTFGTMEELELLT 637
Score = 45.1 bits (92), Expect(2) = 2e-013
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +1 / +2
Query: 184 YETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
+ET + EK+L+LAKL N+ ++EL+ L+RWW+D
Sbjct: 332 FETPYLIREKLLELAKLEFNIFHSLVKRELQSLSRWWKD 448
>gb|AW697531.1|AW697531 ST64A12 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST64A12, mRNA sequence
Length = 385
Score = 54.7 bits (113), Expect(2) = 1e-012
Identities = 26/78 (33%), Positives = 37/78 (47%)
Frame = +1 / +3
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
KL F+R R VE + + +P H R+ +VT+LDDI+D+F T E E+ T
Sbjct: 141 KLDFSRHRHVEYYTLASCIATDPKHRAFRLGFAKTCYLVTVLDDIYDTFGTMGEIELFTE 320
Query: 496 CIESWDPKGAQDLPGCMK 549
+ W LP K
Sbjct: 321 AVRRWXXXXTXXLPDXXK 374
Score = 37.3 bits (75), Expect(2) = 1e-012
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1 / +3
Query: 208 EKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
EK+L+LAKL N+ +EL+ + RWW+D
Sbjct: 36 EKLLELAKLEFNMFHSLQLKELQDICRWWKD 128
>gb|CO174527.1|CO174527 NDL1_44_C05.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_44_C05_A029 5', mRNA sequence
Length = 711
Score = 53.8 bits (111), Expect(2) = 3e-012
Identities = 20/83 (24%), Positives = 42/83 (50%)
Frame = +1 / +2
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
++L F R R VE + W + +EP ++R+ + + +LDD++D+ E + ++
Sbjct: 80 AQLNFYRKRHVEFYFWAVTCIFEPEFCQSRVAFAKLCVVAAVLDDLYDTHGMLDELKTVS 259
Query: 493 NCIESWDPKGAQDLPGCMKFALE 561
+ W+ +LP +K A +
Sbjct: 260 EAVRRWNSSLTDELPDNIKIAFQ 328
Score = 37.3 bits (75), Expect(2) = 3e-012
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1 / +2
Query: 232 LNSNVLQLHHQQELKILTRWWEDMQI 309
L+ N+LQ HQ+E++ +TRWW +I
Sbjct: 2 LDFNILQCIHQKEIQSITRWWRGSEI 79
>gb|CO172156.1|CO172156 NDL1_27_E10.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_27_E10_A029 5', mRNA sequence
Length = 729
Score = 69.8 bits (146), Expect = 2e-011
Identities = 30/79 (37%), Positives = 44/79 (55%)
Frame = +1 / +3
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
+ L F R R VE + + +EP HS R+ I+T+LDD++D+F T E E+ T
Sbjct: 9 ASLTFCRHRHVEYYTLASCIAFEPQHSGFRLGFAKACHIITVLDDMYDTFGTLDELELFT 188
Query: 493 NCIESWDPKGAQDLPGCMK 549
+ I+ WDP + LP MK
Sbjct: 189 SAIKRWDPSATECLPEYMK 245
>gb|BQ702557.1|BQ702557 NXSI_129_H11_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_129_H11 5' similar to Arabidopsis thaliana
sequence At3g25810 terpene synthase-related protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 430
Score = 68.9 bits (144), Expect = 3e-011
Identities = 29/78 (37%), Positives = 44/78 (56%)
Frame = +1 / +3
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F R R VE + + +EP HS R+ I+T+LDD++D+F T E E+ T+
Sbjct: 60 QMTFCRHRHVEYYTLASCIAFEPQHSGFRLGFAKACHIITVLDDMYDTFGTLDELELFTS 239
Query: 496 CIESWDPKGAQDLPGCMK 549
I+ WDP + LP MK
Sbjct: 240 AIKRWDPSATECLPEYMK 293
>gb|DR094501.1|DR094501 STRR1_15_B01.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_15_B01_A033 3', mRNA sequence
Length = 847
Score = 68.9 bits (144), Expect = 3e-011
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +1 / -2
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
+ + F R R VE + + +EP HS R+ I+T+LDD++D+F T E E+ T
Sbjct: 828 ASMTFCRHRHVEYYTLASCIAFEPQHSGFRLGFAKACHIITVLDDMYDTFGTLDELELFT 649
Query: 493 NCIESWDPKGAQDLPGCMK 549
+ I+ WDP + LP MK
Sbjct: 648 SAIKRWDPSATECLPEYMK 592
>gb|DR022955.1|DR022955 STRS1_54_C11.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_54_C11_A034 5', mRNA sequence
Length = 815
Score = 68.0 bits (142), Expect = 6e-011
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = +1 / +1
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F+R R VE + + +P HS R+ + ++T+LDDI+D+F T +E E+LT
Sbjct: 49 EITFSRHRHVEYYTLAACIANDPKHSAFRLGFGKISHMITILDDIYDTFGTMEELELLTA 228
Query: 496 CIESWDPKGAQDLPGCMKFALEKILDS 576
+ WDP + LP MK + D+
Sbjct: 229 AFKRWDPSSIECLPDYMKGVYMAVYDN 309
>gb|DR025189.1|DR025189 STRS1_70_D12.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_70_D12_A034 3', mRNA sequence
Length = 870
Score = 68.0 bits (142), Expect = 6e-011
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = +1 / -3
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F+R R VE + + +P HS R+ + ++T+LDDI+D+F T +E E+LT
Sbjct: 835 EITFSRHRHVEYYTLAACIANDPKHSAFRLGFGKISHMITILDDIYDTFGTMEELELLTA 656
Query: 496 CIESWDPKGAQDLPGCMKFALEKILDS 576
+ WDP + LP MK + D+
Sbjct: 655 AFKRWDPSSIECLPDYMKGVYMAVYDN 575
>gb|DR100208.1|DR100208 STRR1_62_A12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_62_A12_A033 5', mRNA sequence
Length = 719
Score = 68.0 bits (142), Expect = 6e-011
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = +1 / +2
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F+R R VE + + +P HS R+ + ++T+LDDI+D+F T +E E+LT
Sbjct: 8 EITFSRHRHVEYYTLAACIANDPKHSAFRLGFGKISHMITILDDIYDTFGTMEELELLTA 187
Query: 496 CIESWDPKGAQDLPGCMKFALEKILDS 576
+ WDP + LP MK + D+
Sbjct: 188 AFKRWDPSSIECLPDYMKGVYMAVYDN 268
>dbj|BD272959.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 295
Score = 45.1 bits (92), Expect(2) = 2e-010
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +1 / +2
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSF 462
+L FAR R VE + + G+ EP + R+ + ++T+LDDI+D+F
Sbjct: 149 ELTFARHRYVEFYTLVCGIDMEPKDAAFRLSFVKMCHLITILDDIYDTF 295
Score = 39.1 bits (79), Expect(2) = 2e-010
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +1 / +2
Query: 208 EKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
+K+L+L+KL N+ Q+EL+ L+RWW++
Sbjct: 44 KKLLELSKLEFNIFHSVQQKELQCLSRWWKE 136
>gb|CF479802.1|CF479802 RTWW3_12_D02.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_12_D02_A022 3', mRNA sequence
Length = 669
Score = 66.1 bits (138), Expect = 2e-010
Identities = 28/87 (32%), Positives = 48/87 (55%)
Frame = +1 / -3
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F+R R VE + + +P HS R+ + ++T+LDDI+D+F T +E ++LT
Sbjct: 649 EITFSRHRHVEYYTLAACIANDPKHSAFRLGFGKISHMITILDDIYDTFGTMEELKLLTA 470
Query: 496 CIESWDPKGAQDLPGCMKFALEKILDS 576
+ WDP + LP MK + D+
Sbjct: 469 AFKRWDPSSIECLPDYMKGVYMAVYDN 389
>gb|CO168962.1|CO168962 NDL1_3_F03.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_3_F03_A029 5', mRNA sequence
Length = 692
Score = 62.0 bits (129), Expect(2) = 3e-010
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +1 / +3
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
+++ F R R +E + W + +EP S++RI V + T+LDD++D++ E + +T
Sbjct: 30 AQVNFYRRRHMELYFWAVICIFEPEFSQSRIAFAKVTTVGTVLDDLYDTYGMLDELKTIT 209
Query: 493 NCIESWDPKGAQDLPGCMKFALE 561
+ WD DLP +K A++
Sbjct: 210 EGVRRWDISLIDDLPAKIKIAIQ 278
Score = 22.1 bits (42), Expect(2) = 3e-010
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = +1 / +3
Query: 283 TRWWEDMQI 309
TRWW D ++
Sbjct: 3 TRWWRDSEV 29
>gb|DR016616.1|DR016616 STRS1_11_E01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_11_E01_A034 3', mRNA sequence
Length = 759
Score = 63.8 bits (133), Expect = 1e-009
Identities = 28/78 (35%), Positives = 41/78 (52%)
Frame = +1 / -3
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F R R VE + + +EP HS R+ I+T+LDD++D F T E ++ T
Sbjct: 751 QITFTRHRHVEYYTLASCIAFEPQHSGFRLGFAKACHIITVLDDMYDLFGTVDELKLFTA 572
Query: 496 CIESWDPKGAQDLPGCMK 549
I+ WDP LP MK
Sbjct: 571 AIKRWDPSATDCLPQYMK 518
>gb|CF474786.1|CF474786 RTWW2_7_B11.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_7_B11_A021 5', mRNA sequence
Length = 700
Score = 62.0 bits (129), Expect = 4e-009
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +1 / +2
Query: 337 RIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDP 516
R VE + + +P HS R+ + ++T+LDDI+D+F T +E E+LT + WDP
Sbjct: 2 RHVEYYTLAACIANDPKHSAFRLGFGKISHMITILDDIYDTFGTMEELELLTAAFKRWDP 181
Query: 517 KGAQDLPGCMKFALEKILDS 576
+ LP MK + D+
Sbjct: 182 SSIECLPDYMKGVYMAVYDN 241
>gb|DR094415.1|DR094415 STRR1_14_A06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_14_A06_A033 5', mRNA sequence
Length = 855
Score = 62.0 bits (129), Expect = 4e-009
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +1 / +2
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
+++ F R R +E + W + +EP S++RI V + T+LDD++D++ E + +T
Sbjct: 557 AQVNFYRRRHMELYFWAVICIFEPEFSQSRIAFAKVTTVGTVLDDLYDTYGMLDELKTIT 736
Query: 493 NCIESWDPKGAQDLPGCMKFALE 561
+ WD DLP +K A++
Sbjct: 737 EGVRRWDISLIDDLPAKIKIAIQ 805
>gb|CO176229.1|CO176229 NDL1_60_D09.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_60_D09_A029 5', mRNA sequence
Length = 757
Score = 54.7 bits (113), Expect(2) = 7e-009
Identities = 18/35 (51%), Positives = 29/35 (82%)
Frame = +1 / +2
Query: 205 HEKVLQLAKLNSNVLQLHHQQELKILTRWWEDMQI 309
++KVL+LAKL+ N+LQ HQ+E++ +TRWW D ++
Sbjct: 557 NQKVLELAKLDFNILQCIHQKEMQYITRWWRDSEV 661
Score = 24.9 bits (48), Expect(2) = 7e-009
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1 / +2
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARI 405
+++ F R R +E + W + +EP S++RI
Sbjct: 662 AQVNFYRRRHMELYFWAVICIFEPEFSQSRI 754
>gb|CF666483.1|CF666483 RTCNT1_23_D05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_23_D05_A029 5', mRNA sequence
Length = 557
Score = 60.6 bits (126), Expect = 9e-009
Identities = 28/75 (37%), Positives = 39/75 (52%)
Frame = +1 / +1
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
F R R VE + + EP HS R+ + +LDDI+D+F T +E E+ T I+
Sbjct: 19 FTRHRHVEFYTLASCIATEPKHSAFRLGFAKTCYLGIVLDDIYDTFGTMEELELFTAAIK 198
Query: 505 SWDPKGAQDLPGCMK 549
WDP + LP MK
Sbjct: 199 RWDPSAREFLPEYMK 243
>gb|CX715148.1|CX715148 RTPQ1_31_H04.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_31_H04_A032 5', mRNA sequence
Length = 711
Score = 60.6 bits (126), Expect = 9e-009
Identities = 24/66 (36%), Positives = 38/66 (57%)
Frame = +1 / +2
Query: 379 EPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMKFAL 558
+P HS R+ + ++T+LDDI+D+F T +E E+LT + WDP + LP MK
Sbjct: 8 DPKHSAFRLGFGKISHMITILDDIYDTFGTMEELELLTAAFKRWDPSSIECLPDYMKGVY 187
Query: 559 EKILDS 576
+ D+
Sbjct: 188 MAVYDN 205
>gb|DR021123.1|DR021123 STRS1_42_B05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_42_B05_A034 5', mRNA sequence
Length = 593
Score = 60.6 bits (126), Expect = 9e-009
Identities = 24/66 (36%), Positives = 38/66 (57%)
Frame = +1 / +1
Query: 379 EPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMKFAL 558
+P HS R+ + ++T+LDDI+D+F T +E E+LT + WDP + LP MK
Sbjct: 40 DPKHSAFRLGFGKISHMITILDDIYDTFGTMEELELLTAAFKRWDPSSIECLPDYMKGVY 219
Query: 559 EKILDS 576
+ D+
Sbjct: 220 MAVYDN 237
>gb|DR048470.1|DR048470 RTBOR1_9_D05.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_9_D05_A029 3', mRNA sequence
Length = 852
Score = 60.6 bits (126), Expect = 9e-009
Identities = 24/66 (36%), Positives = 38/66 (57%)
Frame = +1 / -2
Query: 379 EPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMKFAL 558
+P HS R+ + ++T+LDDI+D+F T +E E+LT + WDP + LP MK
Sbjct: 851 DPKHSAFRLGFGKISHMITILDDIYDTFGTMEELELLTAAFKRWDPSSIECLPDYMKGVY 672
Query: 559 EKILDS 576
+ D+
Sbjct: 671 MAVYDN 654
>gb|DR092877.1|DR092877 STRR1_4_D02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_4_D02_A033 5', mRNA sequence
Length = 568
Score = 60.6 bits (126), Expect = 9e-009
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = +1 / +2
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
++ F R VE + W+L +EP S +RI T + I T+LDD++D++ T E I T
Sbjct: 260 QVAFYRKCHVELYFWVLTGIFEPEFSSSRISFTKISTIATVLDDLYDTYGTLDEITIFTE 439
Query: 496 CIESWDPKGAQDLPGCMKFALE 561
+ WD LP +K E
Sbjct: 440 GVRRWDISFIACLPDHIKKIFE 505
Score = 50.6 bits (104), Expect = 1e-005
Identities = 17/58 (29%), Positives = 37/58 (63%)
Frame = +1 / +2
Query: 202 LHEKVLQLAKLNSNVLQLHHQQELKILTRWWEDMQIGSKLPFARDRIVECFLWILGVY 375
+++K+L+LAKL+ N+LQ H +EL++++RWW + + + + + F + G++
Sbjct: 149 INQKILELAKLDFNILQSMHHEELQLISRWWAESYLPQVAFYRKCHVELYFWVLTGIF 322
>gb|DR746225.1|DR746225 RTCU1_35_C06.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_35_C06_A029 5', mRNA sequence
Length = 529
Score = 60.6 bits (126), Expect = 9e-009
Identities = 24/66 (36%), Positives = 38/66 (57%)
Frame = +1 / +2
Query: 379 EPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMKFAL 558
+P HS R+ + ++T+LDDI+D+F T +E E+LT + WDP + LP MK
Sbjct: 23 DPKHSAFRLGFGKISHMITILDDIYDTFGTMEELELLTAAFKRWDPSSIECLPDYMKGVY 202
Query: 559 EKILDS 576
+ D+
Sbjct: 203 MAVYDN 220
>gb|DR022416.1|DR022416 STRS1_50_H11.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_50_H11_A034 5', mRNA sequence
Length = 776
Score = 59.7 bits (124), Expect = 2e-008
Identities = 27/75 (36%), Positives = 40/75 (53%)
Frame = +1 / +2
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
F R R VE + + +EP HS + I+T+LDD++D+F T E+ T+ I+
Sbjct: 5 FCRHRHVEYYTLASCIAFEPQHSGFLLGFAKACHIITVLDDMYDTFGTLV*LELFTSAIK 184
Query: 505 SWDPKGAQDLPGCMK 549
WDP + LP MK
Sbjct: 185 RWDPSATECLPEYMK 229
>gb|CF401916.1|CF401916 RTWW1_15_B05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_15_B05_A015 5', mRNA sequence
Length = 696
Score = 57.9 bits (120), Expect = 6e-008
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +1 / +1
Query: 379 EPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMKFAL 558
+P H R+ + ++T+LDDI+D+F T +E E+LT + WDP + LP MK
Sbjct: 13 DPKHFAFRLGFGKISHMITILDDIYDTFGTMEELELLTAAFKRWDPSSIECLPDYMKGVY 192
Query: 559 EKILDS 576
+ D+
Sbjct: 193 MAVYDN 210
>gb|AL750951.1|AL750951 AL750951 RS Pinus pinaster cDNA clone RS02D01 similar to PINENE
SYNTHASE, mRNA sequence
Length = 481
Score = 57.4 bits (119), Expect = 9e-008
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +1 / +2
Query: 343 VECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDPKG 522
VE + + +EP HS R+ I+T+LDD++D F T E ++ T I+ WDP
Sbjct: 5 VEYYTLASCIAFEPQHSGFRLGFAKACHIITVLDDMYDLFGTVDELKLFTAAIKRWDPSA 184
Query: 523 AQDLPGCMK 549
LP MK
Sbjct: 185 TDCLPQYMK 211
>gb|BX677599.1|BX677599 BX677599 RN Pinus pinaster cDNA clone RN41G08, mRNA sequence
Length = 581
Score = 57.0 bits (118), Expect = 1e-007
Identities = 21/67 (31%), Positives = 39/67 (58%)
Frame = +1 / +2
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
++L F RDR+ E F I +EP + R I T ++ +LDD++D+ A+ ++ ++ T
Sbjct: 164 AELNFTRDRVTEIFFSIASSLFEPELASCRAIYTKSTILIVILDDLYDAHASLEDIKLFT 343
Query: 493 NCIESWD 513
++ WD
Sbjct: 344 EAVKRWD 364
>gb|DR024865.1|DR024865 STRS1_68_C01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_68_C01_A034 3', mRNA sequence
Length = 856
Score = 56.5 bits (117), Expect = 2e-007
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +1 / -3
Query: 370 VYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMK 549
+ +EP HS R+ ++T+LDD++D F T E ++ T I+ WDP LP MK
Sbjct: 839 IAFEPQHSGFRLGFAKACHVITVLDDMYDLFGTVDELKLFTAAIKRWDPSATDCLPQYMK 660
>gb|CO368206.1|CO368206 RTK1_39_F05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_39_F05_A029 3', mRNA sequence
Length = 817
Score = 55.6 bits (115), Expect = 3e-007
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +1 / -3
Query: 343 VECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDPKG 522
+E + W + +EP S++RI V + T+LDD++D++ E + +T + WD
Sbjct: 794 MELYFWAVICIFEPELSQSRIAFAKVTTVGTVLDDLYDTYGMLDELKTITEGVRRWDISL 615
Query: 523 AQDLPGCMKFALE 561
DLP +K A++
Sbjct: 614 IDDLPEKIKIAIQ 576
>gb|DR049895.1|DR049895 RTBOR1_19_G01.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_19_G01_A029 5', mRNA sequence
Length = 730
Score = 54.2 bits (112), Expect = 8e-007
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1 / +1
Query: 427 IVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMKFALEKILDS 576
++T+LDDI+D+F T +E E+LT + WDP + LP MK + D+
Sbjct: 19 MITILDDIYDTFGTMEELELLTAAFKRWDPSSIECLPDYMKGVYMAVYDN 168
>gb|DR071138.1|DR071138 RTDK1_17_H03.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_17_H03_A029 5', mRNA sequence
Length = 632
Score = 54.2 bits (112), Expect = 8e-007
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1 / +1
Query: 427 IVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMKFALEKILDS 576
++T+LDDI+D+F T +E E+LT + WDP + LP MK + D+
Sbjct: 25 MITILDDIYDTFGTMEELELLTAAFKRWDPSSIECLPDYMKGVYMAVYDN 174
>gb|BX682869.1|BX682869 BX682869 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 122H09 similar to Pinene synthase (EC
4.2.3.1), mRNA sequence
Length = 730
Score = 53.8 bits (111), Expect = 1e-006
Identities = 23/101 (22%), Positives = 45/101 (44%)
Frame = +1 / +3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
R W + S+L F R+R+ E + +EP + R + T +LDD++D+
Sbjct: 3 RRWWNSSGFSELGFTRERVAEIYFSPASFLFEPEFATCRAVYTKTSNFTVILDDLYDAHG 182
Query: 466 TPQECEILTNCIESWDPKGAQDLPGCMKFALEKILDSYQTI 588
T ++ + ++ WD +P MK + +++ I
Sbjct: 183 TLDNLKLFSESVKRWDLSLVDQMPQDMKICFKGFYNTFNEI 305
>gb|DR120865.1|DR120865 RTMG1_32_A12.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_32_A12_A029 5', mRNA sequence
Length = 718
Score = 53.8 bits (111), Expect = 1e-006
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +1 / +3
Query: 379 EPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMKFAL 558
+P S R+ + ++T+LDDI+D+F T +E E+LT WDP + LP MK
Sbjct: 30 DPKLSAFRLGFGKISHMITILDDIYDTFGTMEELELLTAAFLRWDPSSIECLPDYMKGVY 209
Query: 559 EKILDS 576
+ D+
Sbjct: 210 MAVYDN 227
>gb|DR102565.1|DR102565 STRR1_82_C09.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_82_C09_A033 3', mRNA sequence
Length = 877
Score = 52.8 bits (109), Expect = 2e-006
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +1 / -2
Query: 427 IVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMK 549
I+T+LDD++D+F T E E+ T+ I+ WDP + LP MK
Sbjct: 867 IITVLDDMYDTFGTLDELELFTSAIKRWDPSATECLPEYMK 745
>gb|BX681656.1|BX681656 BX681656 RS Pinus pinaster cDNA clone RS62E09, mRNA sequence
Length = 583
Score = 52.4 bits (108), Expect = 3e-006
Identities = 21/92 (22%), Positives = 42/92 (45%)
Frame = +1 / +1
Query: 313 SKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILT 492
S+L F R+R+ E + +EP + R + T +LDD++D+ T ++ +
Sbjct: 67 SELGFTRERVAEIYFSPASFLFEPEFATCRAVYTKTSNFTVILDDLYDAHGTLDNLKLFS 246
Query: 493 NCIESWDPKGAQDLPGCMKFALEKILDSYQTI 588
++ WD +P MK + +++ I
Sbjct: 247 ESVKRWDLSLVDQMPQDMKICFKGFYNTFNEI 342
>gb|DR017800.1|DR017800 STRS1_18_C07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_18_C07_A034 5', mRNA sequence
Length = 835
Score = 52.4 bits (108), Expect = 3e-006
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +1 / +2
Query: 376 YEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMK 549
+EP HS R+ I+T+LDD++D F T E ++ T I+ W P LP MK
Sbjct: 5 FEPQHSGFRLGFAKACHIITVLDDMYDLFGTVDELKLFTAAIKRWYPSATDCLPQYMK 178
>gb|DR096556.1|DR096556 STRR1_28_E11.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_28_E11_A033 5', mRNA sequence
Length = 865
Score = 52.4 bits (108), Expect = 3e-006
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +1 / +3
Query: 400 RIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMK 549
+I L +VT+LDDI+D+F T E E+ T + WDP LP MK
Sbjct: 3 QIGLCQTCYLVTVLDDIYDTFGTMDEIELFTEAVRRWDPSETDRLPDYMK 152
Score = 35.4 bits (71), Expect = 0.36
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1 / -3
Query: 549 FHATWEVLSPFGIPAFDAISEYFTFLWGRERIENIVQEC 433
FH W+ + GIP+ D E F F+ + + +IVQ C
Sbjct: 152 FHIIWKAVCLRGIPSPDCFCEEFDFVHRSKSVVDIVQNC 36
>gb|DR023995.1|DR023995 STRS1_61_C09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_61_C09_A034 5', mRNA sequence
Length = 921
Score = 50.1 bits (103), Expect(2) = 5e-006
Identities = 22/101 (21%), Positives = 44/101 (43%)
Frame = +1 / +2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
R W + S+L F R+R+ E + +EP + R + T +LDD++D+
Sbjct: 32 RRWWNSSGFSQLGFTRERVAEIYFSPASFLFEPEFATCRAVYTKTSNFTVILDDLYDAHG 211
Query: 466 TPQECEILTNCIESWDPKGAQDLPGCMKFALEKILDSYQTI 588
T ++ + ++ WD + MK + +++ I
Sbjct: 212 TLDNLKLFSESVKRWDLSLVDQMTQDMKICFKGFYNTFNEI 334
Score = 21.7 bits (41), Expect(2) = 5e-006
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 262 QQELKILTRWW 294
+QEL+ + RWW
Sbjct: 11 RQELQDIRRWW 43
>gb|CF477103.1|CF477103 RTWW3_5_A06.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_5_A06_A022 5', mRNA sequence
Length = 745
Score = 51.5 bits (106), Expect = 5e-006
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +1 / +2
Query: 427 IVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMK 549
I+T+LDD++D+F T E E+ T I+ WDP + LP MK
Sbjct: 26 IITVLDDMYDTFGTLDELELFTAAIKRWDPSATECLPEYMK 148
>gb|CO360998.1|CO360998 NDL2_1_H10.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_1_H10_A029 5', mRNA sequence
Length = 778
Score = 50.1 bits (103), Expect = 1e-005
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +1 / +2
Query: 394 RARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMKFALEKILD 573
+ R + T V ++T+LDD++D++ T E ++ T + WD ++LP MK + D
Sbjct: 17 QCRFLFTKVACLLTVLDDMYDTYGTLDELKLFTEAVRRWDLSYTENLPDYMKLCYKIYYD 196
>gb|DR018762.1|DR018762 STRS1_25_C02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_25_C02_A034 5', mRNA sequence
Length = 891
Score = 49.2 bits (101), Expect = 3e-005
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1 / +3
Query: 433 TLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMK 549
T+LDDI+D+F T E E+ T + WDP LP MK
Sbjct: 42 TVLDDIYDTFGTMDEIELFTEAVRRWDPSETDRLPDYMK 158
Score = 33.6 bits (67), Expect = 1.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1 / -2
Query: 549 FHATWEVLSPFGIPAFDAISEYFTFLWGRERIENIVQEC 433
FH W+ + GIP+ D E F F+ + + +IV+ C
Sbjct: 158 FHIIWKAVCLRGIPSPDCFCEEFDFVHRSKSVVDIVKNC 42
>dbj|BD273017.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 396
Score = 46.9 bits (96), Expect = 1e-004
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1 / +1
Query: 208 EKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
+K+L+LAKL N+ QQELK+L+RWW+D
Sbjct: 223 QKLLELAKLEFNMFHSLQQQELKLLSRWWKD 315
>gb|DR743063.1|DR743063 RTCU1_13_G06.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_13_G06_A029 3', mRNA sequence
Length = 839
Score = 45.1 bits (92), Expect = 5e-004
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +1 / -3
Query: 184 YETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
+ET + EK+L+LAKL N+ ++EL+ L+RWW+D
Sbjct: 129 FETPYLIREKLLELAKLEFNIFHSLVKRELQSLSRWWKD 13
>gb|DR744607.1|DR744607 RTCU1_23_D08.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_23_D08_A029 5', mRNA sequence
Length = 593
Score = 45.1 bits (92), Expect = 5e-004
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +1 / +3
Query: 184 YETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
+ET + EK+L+LAKL N+ ++EL+ L+RWW+D
Sbjct: 342 FETPYLIREKLLELAKLEFNIFHSLVKRELQSLSRWWKD 458
>dbj|BD273018.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 462
Score = 44.6 bits (91), Expect = 6e-004
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1 / +1
Query: 199 TLHEKVLQLAKLNSNVLQLHHQQELKILTRWWED 300
T EK+L+LAKL N+ Q+ELK ++RWW+D
Sbjct: 361 TKKEKLLELAKLEFNIFHSLQQKELKHVSRWWKD 462
>gb|DR017363.1|DR017363 STRS1_15_G05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_15_G05_A034 5', mRNA sequence
Length = 727
Score = 41.4 bits (84), Expect = 0.006
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1 / +1
Query: 418 VIAIVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMK 549
V + T+LDD++D++ T E ++ T + WD + LP MK
Sbjct: 1 VACLNTVLDDMYDTYGTLDELKLFTEAVRRWDLSLTESLPDYMK 132
>gb|DR015595.1|DR015595 STRS1_4_A12.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_4_A12_A034 5', mRNA sequence
Length = 881
Score = 40.5 bits (82), Expect = 0.011
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1 / +3
Query: 433 TLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMK 549
T+LDD++D++ T E ++ T + WD + LP MK
Sbjct: 6 TVLDDMYDTYGTLDELKLFTEAVRRWDLSLTESLPDYMK 122
>gb|DR021924.1|DR021924 STRS1_47_F03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_47_F03_A034 5', mRNA sequence
Length = 578
Score = 40.5 bits (82), Expect = 0.011
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1 / +3
Query: 433 TLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMK 549
T+LDD++D++ T E ++ T + WD + LP MK
Sbjct: 9 TVLDDMYDTYGTLDELKLFTEAVRRWDLSLTESLPDYMK 125
>gb|DR100614.1|DR100614 STRR1_65_H03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_65_H03_A033 5', mRNA sequence
Length = 819
Score = 40.5 bits (82), Expect = 0.011
Identities = 15/71 (21%), Positives = 32/71 (45%)
Frame = +1 / +1
Query: 376 YEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMKFA 555
+EP + R + T +LDD++D+ T ++ + ++ WD +P MK
Sbjct: 25 FEPEFATCRAVYTKTSNFTVILDDLYDAHGTLDNLKLFSESVKRWDLSLVDQMPQDMKIC 204
Query: 556 LEKILDSYQTI 588
+ +++ I
Sbjct: 205 FKGFYNTFNEI 237
>gb|AW226490.1|AW226490 ST82H11 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST82H11, mRNA sequence
Length = 306
Score = 39.6 bits (80), Expect = 0.020
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1 / +1
Query: 160 ESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWE 297
E++ Y+ + +K+++LAK+ N+ ++EL+ L RWW+
Sbjct: 34 EARMYMEVFPQDTIYEQKLVELAKVEFNIFHSLQRRELQSLCRWWK 171
>gb|DR744339.1|DR744339 RTCU1_21_G06.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_21_G06_A029 5', mRNA sequence
Length = 464
Score = 39.6 bits (80), Expect = 0.020
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1 / +3
Query: 448 IFDSFATPQECEILTNCIESWDPKGAQDLPGCMK 549
++D+F T E E+ T+ I+ WDP + LP MK
Sbjct: 3 MYDTFGTLDELELFTSAIKRWDPSATECLPEYMK 104
>dbj|BD272946.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 375
Score = 39.6 bits (80), Expect = 0.020
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1 / +1
Query: 208 EKVLQLAKLNSNVLQLHHQQELKILTRWWE 297
EK+L+LAKL N+ ++EL+ L RWW+
Sbjct: 238 EKLLELAKLEFNIFHALQKRELEYLVRWWK 327
>gb|CO171798.1|CO171798 NDL1_24_D12.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_24_D12_A029 5', mRNA sequence
Length = 779
Score = 37.7 bits (76), Expect = 0.073
Identities = 14/27 (51%), Positives = 23/27 (85%)
Frame = +1 / +1
Query: 205 HEKVLQLAKLNSNVLQLHHQQELKILT 285
++KVL+LAKL+ N+LQ HQ+E++ +T
Sbjct: 697 NQKVLELAKLDFNILQCIHQKEMQYIT 777
>gb|DR094934.1|DR094934 STRR1_17_E10.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_17_E10_A033 5', mRNA sequence
Length = 839
Score = 35.9 bits (72), Expect = 0.26
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +1 / +2
Query: 355 LWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWD 513
L+I +EP + R + T +LDD++D+ + ++ ++ ++ WD
Sbjct: 23 LFIASSMFEPELATCRAVYTKSTICTVILDDLYDAHGSVEDIKLFNEAVKRWD 181
>gb|DR100284.1|DR100284 STRR1_63_B06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_63_B06_A033 3', mRNA sequence
Length = 743
Score = 35.4 bits (71), Expect = 0.36
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1 / -1
Query: 439 LDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMK 549
LDD++D++ T E + T + WD + LP MK
Sbjct: 740 LDDMYDTYGTLDEL*LFTEAVRRWDLSLTESLPDYMK 630
Score = 32.2 bits (64), Expect = 3.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1 / +3
Query: 555 SKFHATWEVLSPFGIPAFDAISEYFTFLWGRERIENIVQE 436
++FH W+ IP D++SE F+ G I +I+QE
Sbjct: 624 AEFHIVWKAFCQGEIPPSDSLSE*LQFIEGSICIIHIIQE 743
>gb|DR181384.1|DR181384 RTMNUT1_38_C07.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_38_C07_A029 5', mRNA sequence
Length = 772
Score = 26.7 bits (52), Expect(2) = 1.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3 / +1
Query: 396 SPDNIDNGYRHRDTLGRY 449
+PD + +G RHR +GRY
Sbjct: 229 APDQLPHGERHR*EVGRY 282
Score = 24.4 bits (47), Expect(2) = 1.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3 / +1
Query: 225 CQAELQRSAAPSSARAEDP 281
C+AEL R++ P R DP
Sbjct: 91 CRAELPRTSIPLHRRPTDP 147
>gb|CR392185.1|CR392185 CR392185 RN Pinus pinaster cDNA clone RN27H03, mRNA sequence
Length = 351
Score = 28.6 bits (56), Expect(2) = 1.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 77 SIISRRLLANAMASSSIVSPWV 12
SI+ RR A+AMA+ ++V+ WV
Sbjct: 76 SIVPRRTSASAMAAQTLVAYWV 11
Score = 22.1 bits (42), Expect(2) = 1.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3 / -1
Query: 175 CNTLTRRSCPF*AAGS 128
C + RRSCP +GS
Sbjct: 153 CRGMKRRSCPSCQSGS 106
>gb|CO173039.1|CO173039 NDL1_33_D03.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_33_D03_A029 5', mRNA sequence
Length = 799
Score = 32.7 bits (65), Expect = 2.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1 / +2
Query: 445 DIFDSFATPQECEILTNCIESWDPKGAQDLPGCMKFALE 561
D++D+F E + +T + WD DLP +K A++
Sbjct: 2 DLYDTFGMLDELKTITEGVRRWDISLIDDLPEKIKIAIQ 118
>gb|BQ291232.1|BQ291232 NXRV057_F01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV057_F01 5', mRNA sequence
Length = 668
Score = 32.2 bits (64), Expect = 3.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3 / +3
Query: 216 TATCQAELQRSAAPSSARAEDPDKMVGGYADRIKTSFRTR*NRGVFSMDL 365
TA QA+ + + DP K G Y+ R+K + R RG+ SM++
Sbjct: 330 TAPSQAKWKNKWGSEAHSRNDPSKEYGKYSKRVKRAEAKRILRGLHSMNM 479
>gb|CF479114.1|CF479114 RTWW3_24_E08.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_24_E08_A022 3', mRNA sequence
Length = 692
Score = 32.2 bits (64), Expect = 3.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3 / -3
Query: 216 TATCQAELQRSAAPSSARAEDPDKMVGGYADRIKTSFRTR*NRGVFSMDL 365
TA QA+ + + DP K G Y+ R+K + R RG+ SM++
Sbjct: 426 TAPSQAKWKNKWGSEAHSRNDPSKEYGKYSKRVKRAEAKRILRGLHSMNM 277
>gb|DR693647.1|DR693647 EST1083736 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE239 3' end, mRNA sequence
Length = 746
Score = 32.2 bits (64), Expect = 3.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2 / +1
Query: 353 FYGS*EYTMNRVIQEPG*Y*QWLSPS*HSWTIFSILSRPH 472
F+G + NR+ ++ *QW S HSW + IL +PH
Sbjct: 40 FFGLVVHG*NRLTEDGTEE*QWRDISWHSWWLLRILLQPH 159
>gb|DT638422.1|DT638422 EST1153353 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHF01 3' end, mRNA sequence
Length = 844
Score = 32.2 bits (64), Expect = 3.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2 / +3
Query: 353 FYGS*EYTMNRVIQEPG*Y*QWLSPS*HSWTIFSILSRPH 472
F+G + NR+ ++ *QW S HSW + IL +PH
Sbjct: 48 FFGLVVHG*NRLTEDGTEE*QWRDISWHSWWLLRILLQPH 167
>gb|BM428606.1|BM428606 NXRV_019_C01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_019_C01 5', mRNA sequence
Length = 466
Score = 31.8 bits (63), Expect = 4.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1 / +1
Query: 540 TWEVLSPFGIPAFDAISEYFTFLWG 466
TW S + I A+ A S YF F WG
Sbjct: 85 TWGAASRYSIRAWGATSGYFLFAWG 159
>gb|DR092320.1|DR092320 RTAL1_28_A04.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_28_A04_A029 5', mRNA sequence
Length = 513
Score = 25.8 bits (50), Expect(2) = 4.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2 / -2
Query: 89 KGHCGRMKSDPRWRSRC 139
K C R+ S RWRS C
Sbjct: 317 KDICARLWSSSRWRSSC 267
Score = 23.1 bits (44), Expect(2) = 4.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / -3
Query: 216 TATCQAELQRSAAPSSAR 269
TA +AEL+ S PSS R
Sbjct: 217 TAASKAELKASVRPSSQR 164
>gb|CO362228.1|CO362228 RTK1_2_E06.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_2_E06_A029 3', mRNA sequence
Length = 704
Score = 31.3 bits (62), Expect = 6.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1 / -3
Query: 484 ILTNCIESWDPKGAQDLPGCMKFALEKILDS 576
++ + + WD +D C+KFAL +I D+
Sbjct: 99 LIYSLAQCWDALSKEDCEACLKFALSEIYDN 7
>gb|DR159749.1|DR159749 RTFE1_1_G04.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_1_G04_A029 3', mRNA sequence
Length = 689
Score = 31.3 bits (62), Expect = 6.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1 / +1
Query: 190 TSGTLHEKVLQLAKLNSNVLQLHH 261
T G+LHEK + NS++L L+H
Sbjct: 310 TPGSLHEKTASMRTANSSILTLYH 381
>gb|CF392242.1|CF392242 RTDR3_8_A09.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_8_A09_A022 5', mRNA
sequence
Length = 725
Score = 30.9 bits (61), Expect = 8.5
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2 / -2
Query: 77 CPT*KGHCGRMKSDPRWRSRCLKGAGSTSQSITSMRMRQVERC 205
C * HC R++S RWR + AG + + + ++ C
Sbjct: 568 CLP*TRHCSRIESSRRWRGSNIASAG*RNSRLACPEEQSMDSC 440
>gb|DN610244.1|DN610244 EST963294 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAAN39, mRNA sequence
Length = 685
Score = 30.9 bits (61), Expect = 8.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2 / -3
Query: 44 SRSREAVWR*CCPT*KGHCGRMKSDPRWRSR 136
SR + R C GHCGR +PR RSR
Sbjct: 653 SRCNGPLQRGCPSRKSGHCGRRPREPRKRSR 561
>gb|DN612543.1|DN612543 EST965593 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABH02, mRNA sequence
Length = 687
Score = 30.9 bits (61), Expect = 8.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2 / +1
Query: 44 SRSREAVWR*CCPT*KGHCGRMKSDPRWRSR 136
SR + R C GHCGR +PR RSR
Sbjct: 37 SRCNGPLQRGCPSRKSGHCGRRPREPRKRSR 129
>gb|DR689010.1|DR689010 EST1079096 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACD15 3' end, mRNA sequence
Length = 812
Score = 30.9 bits (61), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2 / +3
Query: 380 NRVIQEPG*Y*QWLSPS*HSWTIFSILSRPH 472
NR+ ++ *QW S HSW + IL +PH
Sbjct: 21 NRLTEDGTEE*QWRDISWHSWWLLRILLQPH 113
Database: Pinus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:25 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 365,094,642
Number of Sequences: 355925
Number of extensions: 5322911
Number of successful extensions: 45055
Number of sequences better than 10.0: 119
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 8249582640
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)