TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE20c02.yg.2.1
(696 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR094032.1|DR094032 STRR1_12_B03.b1_A033 Stem Response R... 274 5e-082
gb|CO169436.1|CO169436 NDL1_7_C03.b1_A029 Needles control P... 275 9e-081
gb|DR052459.1|DR052459 RTCA1_4_F07.g1_A029 Roots minus calc... 275 2e-073
gb|BX681734.1|BX681734 BX681734 RS Pinus pinaster cDNA clon... 261 4e-073
gb|CX652380.1|CX652380 COLD1_58_E05.g1_A029 Root cold Pinus... 273 1e-072
gb|DR091853.1|DR091853 RTAL1_24_A01.g1_A029 Roots plus adde... 235 2e-070
gb|DR055655.1|DR055655 RTCA1_25_C02.b1_A029 Roots minus cal... 235 2e-070
gb|DR019714.1|DR019714 STRS1_31_H11.g1_A034 Shoot tip pitch... 225 2e-067
gb|DR094103.1|DR094103 STRR1_12_B03.g1_A033 Stem Response R... 254 5e-067
gb|DR019596.1|DR019596 STRS1_31_D05.b1_A034 Shoot tip pitch... 228 4e-059
gb|DR164307.1|DR164307 RTFE1_48_D09.b1_A029 Roots minus iro... 228 4e-059
gb|DR052378.1|DR052378 RTCA1_4_F07.b1_A029 Roots minus calc... 222 2e-057
gb|CO164857.1|CO164857 FLD1_50_F04.g1_A029 Root flooded Pin... 176 9e-057
gb|DR013664.1|DR013664 HEAT1_20_F02.g1_A029 Root at 37 C fo... 188 2e-056
gb|DR178543.1|DR178543 RTMNUT1_12_A07.g1_A029 Roots minus m... 177 9e-050
gb|DR094305.1|DR094305 STRR1_13_F01.g1_A033 Stem Response R... 176 3e-049
gb|DR091441.1|DR091441 RTAL1_21_D07.g1_A029 Roots plus adde... 177 8e-049
gb|CF392740.1|CF392740 RTDR3_5_G10.g1_A022 Loblolly pine ro... 168 1e-048
gb|CF390924.1|CF390924 RTDR3_2_H05.g1_A022 Loblolly pine ro... 172 3e-048
gb|AF072736.1|AF072736 Pinus contorta beta-glucosidase mRNA... 151 3e-048
gb|DR744730.1|DR744730 RTCU1_24_B09.g1_A029 Roots plus adde... 106 2e-047
gb|DR054674.1|DR054674 RTCA1_18_G02.g1_A029 Roots minus cal... 157 3e-047
gb|DR743237.1|DR743237 RTCU1_14_B08.g1_A029 Roots plus adde... 158 6e-047
gb|DR388562.1|DR388562 RTHG1_29_B07.b1_A029 Roots plus adde... 157 8e-046
gb|DR093835.1|DR093835 STRR1_10_E06.g1_A033 Stem Response R... 183 8e-046
gb|DR690593.1|DR690593 EST1080679 Normalized pine embryo li... 164 4e-045
gb|DT636173.1|DT636173 EST1151104 Normalized pine embryo li... 164 4e-045
gb|AW056671.1|AW056671 ST54D07 Pine TriplEx shoot tip libra... 150 5e-045
gb|DR019640.1|DR019640 STRS1_31_H11.b1_A034 Shoot tip pitch... 178 4e-044
gb|CX651881.1|CX651881 COLD1_55_A04.g1_A029 Root cold Pinus... 122 4e-044
gb|DR387566.1|DR387566 RTHG1_22_E08.g2_A029 Roots plus adde... 160 7e-044
gb|DR019670.1|DR019670 STRS1_31_D05.g1_A034 Shoot tip pitch... 176 2e-043
gb|CX649586.1|CX649586 COLD1_36_E07.b1_A029 Root cold Pinus... 151 5e-041
gb|CO162287.1|CO162287 FLD1_34_H05.b1_A029 Root flooded Pin... 151 5e-041
gb|DR081852.1|DR081852 RTFEPL1_32_F12.g1_A029 Roots plus ad... 159 7e-041
gb|DR385449.1|DR385449 RTHG1_8_F01.g1_A029 Roots plus added... 75 4e-040
gb|CF390174.1|CF390174 RTDR2_12_E07.g1_A021 Loblolly pine r... 162 2e-039
gb|CO362034.1|CO362034 NDL2_8_E08.g1_A029 Needles control 2... 162 2e-039
gb|CR394381.1|CR394381 CR394381 RN Pinus pinaster cDNA clon... 142 4e-039
gb|AW010487.1|AW010487 ST07D06 Pine TriplEx shoot tip libra... 96 2e-035
gb|CO199490.1|CO199490 GEO2_1_C06.g1_A032 Root gravitropism... 127 1e-034
gb|CO174896.1|CO174896 NDL1_47_A06.b1_A029 Needles control ... 80 2e-031
gb|DR055729.1|DR055729 RTCA1_25_C02.g1_A029 Roots minus cal... 132 3e-030
gb|CF666831.1|CF666831 RTCNT1_26_A11.g1_A029 Root control P... 98 2e-029
gb|BI643956.1|BI643956 NXPV_133_B02_F NXPV (Nsf Xylem Plani... 129 2e-029
gb|BG318692.1|BG318692 NXPV_015_G08_F NXPV (Nsf Xylem Plani... 128 3e-029
gb|BI397619.1|BI397619 NXPV_102_C02_F NXPV (Nsf Xylem Plani... 127 6e-029
gb|CF671986.1|CF671986 RTCNT1_60_C07.g1_A029 Root control P... 105 9e-029
gb|DR095084.1|DR095084 STRR1_18_E04.g1_A033 Stem Response R... 117 2e-028
gb|DR019869.1|DR019869 STRS1_33_B04.b1_A034 Shoot tip pitch... 96 2e-028
gb|CF477622.1|CF477622 RTWW3_9_B03.b1_A022 Well-watered lob... 110 1e-023
gb|CO369254.1|CO369254 RTK1_46_A07.b1_A029 Roots minus pota... 110 1e-023
dbj|BD224353.1| Materials and methods for the modification ... 68 1e-023
dbj|BD224416.1| Materials and methods for the modification ... 68 1e-023
gb|AI725219.1|AI725219 1238 PtIFG2 Pinus taeda cDNA clone 9... 94 3e-023
gb|BQ697001.1|BQ697001 NXPV_048_A07_F NXPV (Nsf Xylem Plani... 90 9e-023
gb|CO369338.1|CO369338 RTK1_46_A07.g1_A029 Roots minus pota... 106 2e-022
>gb|DR094032.1|DR094032 STRR1_12_B03.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_12_B03_A033 3', mRNA sequence
Length = 910
Score = 274 bits (592), Expect(2) = 5e-082
Identities = 108/175 (61%), Positives = 129/175 (73%)
Frame = -3 / -2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LLSHATAV YR KYQ QKGK+GI+LDF WYEP TNS+EDQ AAQR
Sbjct: 651 NSATEPYIVAHNLLLSHATAVKIYREKYQPMQKGKIGILLDFVWYEPLTNSSEDQGAAQR 472
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
+RDFHIGWFL P+ G+YP M +IV RLP FT +Q+++VKGS DY G+NQYT YY+ D
Sbjct: 471 SRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKKQSQMVKGSIDYLGVNQYTAYYMYD 292
Query: 181 QQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
+ P Q Y DW + + RNGV IG A+S WLYIVP G+Y V Y+KE Y
Sbjct: 291 PKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHY 127
Score = 114 bits (243), Expect(3) = 5e-035
Identities = 66/126 (52%), Positives = 76/126 (60%)
Frame = +3 / +2
Query: 165 CGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQP 344
C G S M* VY L P+*S EPLT C V LGS T+S I GY P + G RN P
Sbjct: 275 CLGCLGSYM**AVYWLTPR*SIEPLTIWDCFFVNLGSLVPTISTIESGYFP*VIGWRNHP 454
Query: 345 IWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM* 524
IWKSL L AA SS+EFV+GSY KS++IP PF + Y + TAVA + L TM*
Sbjct: 455 IWKSLDL*AAPWSSLEFVRGSYHTKSKSIPIFPFCMG*YFSL*IFTAVACESSKLCATM* 634
Query: 525 GSVDEF 542
GSV EF
Sbjct: 635 GSVAEF 652
Score = 51.0 bits (105), Expect(2) = 5e-082
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -3 / -2
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A FKT RVK W EPR+VA GYD G+ P C+
Sbjct: 801 FAEFCFKTFGDRVKYWMTFNEPRVVAALGYDNGIFAPGRCS 679
Score = 36.3 bits (73), Expect(3) = 5e-035
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +3 / +2
Query: 24 SFR*FTTPYMPDGTM*SQIECAICPICTP 110
SF T Y P GTM*SQ+E A+ PI TP
Sbjct: 134 SFTYVTALYRPQGTM*SQLEFALGPIGTP 220
Score = 35.4 bits (71), Expect(3) = 5e-035
Identities = 19/39 (48%), Positives = 19/39 (48%)
Frame = +3 / +2
Query: 564 HXXGGXSPLS*PXNATILGSXNXXQXLTRXXXVLKXXSA 680
H G PLS*P AT GS N Q T VLK SA
Sbjct: 683 HLPGAKMPLS*PRAATTRGSLNVIQYFTLSPKVLKQNSA 799
>gb|CO169436.1|CO169436 NDL1_7_C03.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_C03_A029 3', mRNA sequence
Length = 795
Score = 275 bits (596), Expect(2) = 9e-081
Identities = 109/175 (62%), Positives = 129/175 (73%)
Frame = -3 / -2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LLSHATAV YR KYQ QKGK+GI+LDF WYEP TNS+EDQ AAQR
Sbjct: 662 NSATEPYIVAHNLLLSHATAVKIYREKYQPMQKGKIGILLDFVWYEPLTNSSEDQGAAQR 483
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
+RDFHIGWFL P+ G+YP M +IV RLP FT EQ+++VKGS DY G+NQYT YY+ D
Sbjct: 482 SRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVNQYTAYYMYD 303
Query: 181 QQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
+ P Q Y DW + + RNGV IG A+S WLYIVP G+Y V Y+KE Y
Sbjct: 302 PKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHY 138
Score = 116 bits (249), Expect(2) = 1e-030
Identities = 67/126 (53%), Positives = 77/126 (61%)
Frame = +3 / +1
Query: 165 CGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQP 344
C G S M* VY L P+*S EPLT CS V LGS T+S I GY P + G RN P
Sbjct: 286 CLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLGSLVPTISTIESGYFP*VIGWRNHP 465
Query: 345 IWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM* 524
IWKSL L AA SS+EFV+GSY KS++IP PF + Y + TAVA + L TM*
Sbjct: 466 IWKSLDL*AAPWSSLEFVRGSYHTKSKSIPIFPFCMG*YFSL*IFTAVACESSKLCATM* 645
Query: 525 GSVDEF 542
GSV EF
Sbjct: 646 GSVAEF 663
Score = 45.1 bits (92), Expect(2) = 9e-081
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3 / -2
Query: 664 KTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+T RVK W EPR+VA GYD G+ P C+
Sbjct: 794 QTFGDRVKYWMTFNEPRVVAALGYDNGIFAPGRCS 690
Score = 36.3 bits (73), Expect(2) = 1e-030
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +3 / +1
Query: 24 SFR*FTTPYMPDGTM*SQIECAICPICTP 110
SF T Y P GTM*SQ+E A+ PI TP
Sbjct: 145 SFTYVTALYRPQGTM*SQLEFALGPIGTP 231
>gb|DR052459.1|DR052459 RTCA1_4_F07.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_4_F07_A029 5', mRNA sequence
Length = 932
Score = 275 bits (596), Expect = 2e-073
Identities = 109/175 (62%), Positives = 129/175 (73%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LLSHATAV YR KYQ QKGK+GI+LDF WYEP TNS+EDQ AAQR
Sbjct: 58 NSATEPYIVAHNLLLSHATAVKIYREKYQPMQKGKIGILLDFVWYEPLTNSSEDQGAAQR 237
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
+RDFHIGWFL P+ G+YP M +IV RLP FT EQ+++VKGS DY G+NQYT YY+ D
Sbjct: 238 SRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVNQYTAYYMYD 417
Query: 181 QQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
+ P Q Y DW + + RNGV IG A+S WLYIVP G+Y V Y+KE Y
Sbjct: 418 PKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHY 582
Score = 116 bits (249), Expect(2) = 1e-030
Identities = 67/126 (53%), Positives = 77/126 (61%)
Frame = +3 / -1
Query: 165 CGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQP 344
C G S M* VY L P+*S EPLT CS V LGS T+S I GY P + G RN P
Sbjct: 434 CLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLGSLVPTISTIESGYFP*VIGWRNHP 255
Query: 345 IWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM* 524
IWKSL L AA SS+EFV+GSY KS++IP PF + Y + TAVA + L TM*
Sbjct: 254 IWKSLDL*AAPWSSLEFVRGSYHTKSKSIPIFPFCMG*YFSL*IFTAVACESSKLCATM* 75
Query: 525 GSVDEF 542
GSV EF
Sbjct: 74 GSVAEF 57
Score = 36.3 bits (73), Expect(2) = 1e-030
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +3 / -1
Query: 24 SFR*FTTPYMPDGTM*SQIECAICPICTP 110
SF T Y P GTM*SQ+E A+ PI TP
Sbjct: 575 SFTYVTALYRPQGTM*SQLEFALGPIGTP 489
>gb|BX681734.1|BX681734 BX681734 RS Pinus pinaster cDNA clone RS63F06, mRNA sequence
Length = 620
Score = 261 bits (564), Expect(2) = 4e-073
Identities = 103/165 (62%), Positives = 123/165 (74%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LLSHATAV YR KYQ QKGK+GI+LDF WYEP TNS+EDQ AAQR
Sbjct: 98 NSATEPYIVAHNLLLSHATAVKIYREKYQPMQKGKIGILLDFVWYEPLTNSSEDQGAAQR 277
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
+RDFHIGWFL P+ G+YP M +IV RLP FT EQ+++VKGS D+ G+NQYT YY+ D
Sbjct: 278 SRDFHIGWFLHPITYGKYPDSMVEIVGTRLPMFTKEQSQMVKGSIDFLGVNQYTAYYMYD 457
Query: 181 QQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMY 47
+ P Q Y DW + + RNGV IG A+S WLYIVP G+Y
Sbjct: 458 PKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGIY 592
Score = 112 bits (240), Expect(2) = 7e-029
Identities = 65/126 (51%), Positives = 76/126 (60%)
Frame = +3 / -3
Query: 165 CGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQP 344
C G S M* VY L P+ S EPLT CS V +GS T+S I GY P + G RN P
Sbjct: 474 CLGCLGSYM**AVYWLTPRKSIEPLTI*DCSFVNMGSLVPTISTIESGYFP*VIGWRNHP 295
Query: 345 IWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM* 524
IWKSL L AA SS+EFV+GSY KS++IP PF + Y + TAVA + L TM*
Sbjct: 294 IWKSLDL*AAPWSSLEFVRGSYHTKSKSIPIFPFCMG*YFSL*IFTAVACESSKLCATM* 115
Query: 525 GSVDEF 542
GSV EF
Sbjct: 114 GSVAEF 97
Score = 34.5 bits (69), Expect(2) = 7e-029
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3 / -3
Query: 48 YMPDGTM*SQIECAICPICTP 110
Y+P GTM*SQ+E A+ PI TP
Sbjct: 591 YIPQGTM*SQLEFALGPIGTP 529
Score = 34.1 bits (68), Expect(2) = 4e-073
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3 / +2
Query: 628 LXEPRIVAXXGYDKGLXPPXXCT 560
+ EPR+VA GYD G+ P C+
Sbjct: 2 INEPRVVAALGYDNGIFAPGRCS 70
>gb|CX652380.1|CX652380 COLD1_58_E05.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_58_E05_A029 5', mRNA sequence
Length = 588
Score = 273 bits (590), Expect = 1e-072
Identities = 108/173 (62%), Positives = 128/173 (73%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LLSHATAV YR KYQ QKGK+GI+LDF WYEP TNS+EDQ AAQR
Sbjct: 26 NSATEPYIVAHNLLLSHATAVKIYREKYQPMQKGKIGILLDFVWYEPLTNSSEDQGAAQR 205
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
+RDFHIGWFL P+ G+YP M +IV RLP FT EQ+++VKGS DY G+NQYT YY+ D
Sbjct: 206 SRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVNQYTAYYMYD 385
Query: 181 QQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKE 23
+ P Q Y DW + + RNGV IG A+S WLYIVP G+Y V Y+KE
Sbjct: 386 PKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 544
Score = 116 bits (249), Expect(2) = 1e-030
Identities = 67/126 (53%), Positives = 77/126 (61%)
Frame = +3 / -1
Query: 165 CGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQP 344
C G S M* VY L P+*S EPLT CS V LGS T+S I GY P + G RN P
Sbjct: 402 CLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLGSLVPTISTIESGYFP*VIGWRNHP 223
Query: 345 IWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM* 524
IWKSL L AA SS+EFV+GSY KS++IP PF + Y + TAVA + L TM*
Sbjct: 222 IWKSLDL*AAPWSSLEFVRGSYHTKSKSIPIFPFCMG*YFSL*IFTAVACESSKLCATM* 43
Query: 525 GSVDEF 542
GSV EF
Sbjct: 42 GSVAEF 25
Score = 36.3 bits (73), Expect(2) = 1e-030
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +3 / -1
Query: 24 SFR*FTTPYMPDGTM*SQIECAICPICTP 110
SF T Y P GTM*SQ+E A+ PI TP
Sbjct: 543 SFTYVTALYRPQGTM*SQLEFALGPIGTP 457
>gb|DR091853.1|DR091853 RTAL1_24_A01.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_24_A01_A029 5', mRNA sequence
Length = 788
Score = 235 bits (508), Expect(2) = 2e-070
Identities = 92/146 (63%), Positives = 109/146 (74%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LLSHATAV YR KYQ QKGK+GI+LDF WYEP TNS+EDQ AAQR
Sbjct: 347 NSATEPYIVAHNLLLSHATAVKIYREKYQPMQKGKIGILLDFVWYEPLTNSSEDQGAAQR 526
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
+RDFHIGWFL P+ G+YP M +IV RLP FT EQ+++VKGS DY G+NQYT YY+ D
Sbjct: 527 SRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVNQYTAYYMYD 706
Query: 181 QQTPPQGPPSYSSDWGVQYYFQRNGV 104
+ P Q Y DW + + RNGV
Sbjct: 707 PKQPKQNVTDYQMDWNTGFAYARNGV 784
Score = 116 bits (249), Expect(2) = 2e-030
Identities = 67/126 (53%), Positives = 77/126 (61%)
Frame = +3 / -3
Query: 165 CGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQP 344
C G S M* VY L P+*S EPLT CS V LGS T+S I GY P + G RN P
Sbjct: 723 CLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLGSLVPTISTIESGYFP*VIGWRNHP 544
Query: 345 IWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM* 524
IWKSL L AA SS+EFV+GSY KS++IP PF + Y + TAVA + L TM*
Sbjct: 543 IWKSLDL*AAPWSSLEFVRGSYHTKSKSIPIFPFCMG*YFSL*IFTAVACESSKLCATM* 364
Query: 525 GSVDEF 542
GSV EF
Sbjct: 363 GSVAEF 346
Score = 51.0 bits (105), Expect(2) = 2e-070
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -3 / +2
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A FKT RVK W EPR+VA GYD G+ P C+
Sbjct: 197 FAEFCFKTFGDRVKYWMTFNEPRVVAALGYDNGIFAPGRCS 319
Score = 35.4 bits (71), Expect(2) = 2e-030
Identities = 19/39 (48%), Positives = 19/39 (48%)
Frame = +3 / -3
Query: 564 HXXGGXSPLS*PXNATILGSXNXXQXLTRXXXVLKXXSA 680
H G PLS*P AT GS N Q T VLK SA
Sbjct: 315 HLPGAKMPLS*PRAATTRGSLNVIQYFTLSPKVLKQNSA 199
>gb|DR055655.1|DR055655 RTCA1_25_C02.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_25_C02_A029 3', mRNA sequence
Length = 696
Score = 235 bits (508), Expect(2) = 2e-070
Identities = 92/146 (63%), Positives = 109/146 (74%)
Frame = -3 / -3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LLSHATAV YR KYQ QKGK+GI+LDF WYEP TNS+EDQ AAQR
Sbjct: 439 NSATEPYIVAHNLLLSHATAVKIYREKYQPMQKGKIGILLDFVWYEPLTNSSEDQGAAQR 260
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
+RDFHIGWFL P+ G+YP M +IV RLP FT EQ+++VKGS DY G+NQYT YY+ D
Sbjct: 259 SRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVNQYTAYYMYD 80
Query: 181 QQTPPQGPPSYSSDWGVQYYFQRNGV 104
+ P Q Y DW + + RNGV
Sbjct: 79 PKQPKQNVTDYQMDWNTGFAYARNGV 2
Score = 116 bits (249), Expect(2) = 2e-030
Identities = 67/126 (53%), Positives = 77/126 (61%)
Frame = +3 / +3
Query: 165 CGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQP 344
C G S M* VY L P+*S EPLT CS V LGS T+S I GY P + G RN P
Sbjct: 63 CLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLGSLVPTISTIESGYFP*VIGWRNHP 242
Query: 345 IWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM* 524
IWKSL L AA SS+EFV+GSY KS++IP PF + Y + TAVA + L TM*
Sbjct: 243 IWKSLDL*AAPWSSLEFVRGSYHTKSKSIPIFPFCMG*YFSL*IFTAVACESSKLCATM* 422
Query: 525 GSVDEF 542
GSV EF
Sbjct: 423 GSVAEF 440
Score = 51.0 bits (105), Expect(2) = 2e-070
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -3 / -3
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A FKT RVK W EPR+VA GYD G+ P C+
Sbjct: 589 FAEFCFKTFGDRVKYWMTFNEPRVVAALGYDNGIFAPGRCS 467
Score = 35.4 bits (71), Expect(2) = 2e-030
Identities = 19/39 (48%), Positives = 19/39 (48%)
Frame = +3 / +3
Query: 564 HXXGGXSPLS*PXNATILGSXNXXQXLTRXXXVLKXXSA 680
H G PLS*P AT GS N Q T VLK SA
Sbjct: 471 HLPGAKMPLS*PRAATTRGSLNVIQYFTLSPKVLKQNSA 587
>gb|DR019714.1|DR019714 STRS1_31_H11.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_H11_A034 5', mRNA sequence
Length = 739
Score = 225 bits (486), Expect(2) = 2e-067
Identities = 88/135 (65%), Positives = 103/135 (76%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LLSHATAV YR KYQ QKGK+GI+LDF WYEP TNS+EDQ AAQR
Sbjct: 334 NSATEPYIVAHNLLLSHATAVKIYREKYQPMQKGKIGILLDFVWYEPLTNSSEDQGAAQR 513
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
+RDFHIGWFL P+ G+YP M +IV RLP FT EQ+++VKGS DY G+NQYT YY+ D
Sbjct: 514 SRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVNQYTAYYMYD 693
Query: 181 QQTPPQGPPSYSSDW 137
+ P Q Y DW
Sbjct: 694 PKQPKQNVTDYQMDW 738
Score = 116 bits (249), Expect(2) = 2e-030
Identities = 67/126 (53%), Positives = 77/126 (61%)
Frame = +3 / -3
Query: 165 CGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQP 344
C G S M* VY L P+*S EPLT CS V LGS T+S I GY P + G RN P
Sbjct: 710 CLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLGSLVPTISTIESGYFP*VIGWRNHP 531
Query: 345 IWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM* 524
IWKSL L AA SS+EFV+GSY KS++IP PF + Y + TAVA + L TM*
Sbjct: 530 IWKSLDL*AAPWSSLEFVRGSYHTKSKSIPIFPFCMG*YFSL*IFTAVACESSKLCATM* 351
Query: 525 GSVDEF 542
GSV EF
Sbjct: 350 GSVAEF 333
Score = 51.0 bits (105), Expect(2) = 2e-067
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -3 / +1
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A FKT RVK W EPR+VA GYD G+ P C+
Sbjct: 184 FAEFCFKTFGDRVKYWMTFNEPRVVAALGYDNGIFAPGRCS 306
Score = 35.4 bits (71), Expect(2) = 2e-030
Identities = 19/39 (48%), Positives = 19/39 (48%)
Frame = +3 / -3
Query: 564 HXXGGXSPLS*PXNATILGSXNXXQXLTRXXXVLKXXSA 680
H G PLS*P AT GS N Q T VLK SA
Sbjct: 302 HLPGAKMPLS*PRAATTRGSLNVIQYFTLSPKVLKQNSA 186
>gb|DR094103.1|DR094103 STRR1_12_B03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_12_B03_A033 5', mRNA sequence
Length = 864
Score = 254 bits (549), Expect = 5e-067
Identities = 100/165 (60%), Positives = 120/165 (72%)
Frame = -3 / -1
Query: 511 HNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFL 332
HN+LLSHATAV YR KYQ QKGK+GI+LDF WYEP TNS+EDQ AAQR+RDFHIGWFL
Sbjct: 861 HNLLLSHATAVKIYREKYQPMQKGKIGILLDFVWYEPLTNSSEDQGAAQRSRDFHIGWFL 682
Query: 331 DPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPS 152
P+ G+YP M +IV RLP FT +Q+++VKGS DY G+NQYT YY+ D + P Q
Sbjct: 681 HPITYGKYPDSMVEIVGTRLPKFTKKQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTD 502
Query: 151 YSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
Y DW + + RNGV IG A+S WLYIVP G+Y V Y+KE Y
Sbjct: 501 YQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHY 367
Score = 100 bits (214), Expect(2) = 7e-026
Identities = 57/109 (52%), Positives = 66/109 (60%)
Frame = +3 / +2
Query: 165 CGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQP 344
C G S M* VY L P+*S EPLT C V LGS T+S I GY P + G RN P
Sbjct: 515 CLGCLGSYM**AVYWLTPR*SIEPLTIWDCFFVNLGSLVPTISTIESGYFP*VIGWRNHP 694
Query: 345 IWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA 491
IWKSL L AA SS+EFV+GSY KS++IP PF + Y + TAVA
Sbjct: 695 IWKSLDL*AAPWSSLEFVRGSYHTKSKSIPIFPFCMG*YFSL*IFTAVA 841
Score = 36.3 bits (73), Expect(2) = 7e-026
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +3 / +2
Query: 24 SFR*FTTPYMPDGTM*SQIECAICPICTP 110
SF T Y P GTM*SQ+E A+ PI TP
Sbjct: 374 SFTYVTALYRPQGTM*SQLEFALGPIGTP 460
>gb|DR019596.1|DR019596 STRS1_31_D05.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_D05_A034 3', mRNA sequence
Length = 865
Score = 228 bits (492), Expect = 4e-059
Identities = 89/149 (59%), Positives = 107/149 (71%)
Frame = -3 / -1
Query: 463 KYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIV 284
KYQ QKGK+GI+LDF WYEP TNS+EDQ AAQR+RDFHIGWFL P+ G+YP M +IV
Sbjct: 865 KYQPMQKGKIGILLDFVWYEPLTNSSEDQGAAQRSRDFHIGWFLHPITYGKYPDSMVEIV 686
Query: 283 KDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGV 104
RLP FT EQ+++VKGS DY G+NQYT YY+ D + P Q Y DW + + RNGV
Sbjct: 685 GTRLPKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGV 506
Query: 103 QIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
IG A+S WLYIVP G+Y V Y+KE Y
Sbjct: 505 PIGPRANSNWLYIVPWGLYKAVTYVKEHY 419
Score = 99.6 bits (211), Expect(2) = 2e-025
Identities = 53/94 (56%), Positives = 60/94 (63%)
Frame = +3 / +3
Query: 165 CGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQP 344
C G S M* VY L P+*S EPLT CS V LGS T+S I GY P + G RN P
Sbjct: 567 CLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLGSLVPTISTIESGYFP*VIGWRNHP 746
Query: 345 IWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF 446
IWKSL L AA SS+EFV+GSY KS++IP PF
Sbjct: 747 IWKSLDL*AAPWSSLEFVRGSYHTKSKSIPIFPF 848
Score = 36.3 bits (73), Expect(2) = 2e-025
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +3 / +3
Query: 24 SFR*FTTPYMPDGTM*SQIECAICPICTP 110
SF T Y P GTM*SQ+E A+ PI TP
Sbjct: 426 SFTYVTALYRPQGTM*SQLEFALGPIGTP 512
>gb|DR164307.1|DR164307 RTFE1_48_D09.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_48_D09_A029 3', mRNA sequence
Length = 868
Score = 228 bits (492), Expect = 4e-059
Identities = 89/149 (59%), Positives = 107/149 (71%)
Frame = -3 / +3
Query: 463 KYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIV 284
KYQ QKGK+GI+LDF WYEP TNS+EDQ AAQR+RDFHIGWFL P+ G+YP M +IV
Sbjct: 6 KYQPMQKGKIGILLDFVWYEPLTNSSEDQGAAQRSRDFHIGWFLHPITYGKYPDSMVEIV 185
Query: 283 KDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGV 104
RLP FT EQ+++VKGS DY G+NQYT YY+ D + P Q Y DW + + RNGV
Sbjct: 186 GTRLPKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGV 365
Query: 103 QIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
IG A+S WLYIVP G+Y V Y+KE Y
Sbjct: 366 PIGPRANSNWLYIVPWGLYKAVTYVKEHY 452
Score = 99.6 bits (211), Expect(2) = 2e-025
Identities = 53/94 (56%), Positives = 60/94 (63%)
Frame = +3 / -1
Query: 165 CGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQP 344
C G S M* VY L P+*S EPLT CS V LGS T+S I GY P + G RN P
Sbjct: 304 CLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLGSLVPTISTIESGYFP*VIGWRNHP 125
Query: 345 IWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF 446
IWKSL L AA SS+EFV+GSY KS++IP PF
Sbjct: 124 IWKSLDL*AAPWSSLEFVRGSYHTKSKSIPIFPF 23
Score = 36.3 bits (73), Expect(2) = 2e-025
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +3 / -1
Query: 24 SFR*FTTPYMPDGTM*SQIECAICPICTP 110
SF T Y P GTM*SQ+E A+ PI TP
Sbjct: 445 SFTYVTALYRPQGTM*SQLEFALGPIGTP 359
>gb|DR052378.1|DR052378 RTCA1_4_F07.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_4_F07_A029 3', mRNA sequence
Length = 865
Score = 222 bits (480), Expect = 2e-057
Identities = 87/147 (59%), Positives = 105/147 (71%)
Frame = -3 / +1
Query: 457 QATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKD 278
Q QKGK+GI+LDF WYEP TNS+EDQ AAQR+RDFHIGWFL P+ G+YP M +IV
Sbjct: 1 QPMQKGKIGILLDFVWYEPLTNSSEDQGAAQRSRDFHIGWFLHPITYGKYPDSMVEIVGT 180
Query: 277 RLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQI 98
RLP FT EQ+++VKGS DY G+NQYT YY+ D + P Q Y DW + + RNGV I
Sbjct: 181 RLPKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPI 360
Query: 97 GQMAHSIWLYIVPSGMYGVVNYLKEKY 17
G A+S WLYIVP G+Y V Y+KE Y
Sbjct: 361 GPRANSNWLYIVPWGLYKAVTYVKEHY 441
Score = 99.6 bits (211), Expect(2) = 2e-025
Identities = 53/94 (56%), Positives = 60/94 (63%)
Frame = +3 / -3
Query: 165 CGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQP 344
C G S M* VY L P+*S EPLT CS V LGS T+S I GY P + G RN P
Sbjct: 293 CLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLGSLVPTISTIESGYFP*VIGWRNHP 114
Query: 345 IWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF 446
IWKSL L AA SS+EFV+GSY KS++IP PF
Sbjct: 113 IWKSLDL*AAPWSSLEFVRGSYHTKSKSIPIFPF 12
Score = 36.3 bits (73), Expect(2) = 2e-025
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +3 / -3
Query: 24 SFR*FTTPYMPDGTM*SQIECAICPICTP 110
SF T Y P GTM*SQ+E A+ PI TP
Sbjct: 434 SFTYVTALYRPQGTM*SQLEFALGPIGTP 348
>gb|CO164857.1|CO164857 FLD1_50_F04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_50_F04_A029 5', mRNA sequence
Length = 873
Score = 176 bits (379), Expect(3) = 9e-057
Identities = 68/123 (55%), Positives = 89/123 (72%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LLSHA V YR Y+A Q G++G+ LD WYEP ++S ED A QR
Sbjct: 346 NSATEPYIVAHNVLLSHAKTVDIYRTNYKAKQGGRIGVALDVIWYEPMSDSPEDIAATQR 525
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
A+DF +GWF+DPL+ G YP M++ V +RLP F+ E++ VKGS D+ GIN YTTYY +
Sbjct: 526 AQDFQLGWFMDPLVFGDYPASMRERVGNRLPLFSSEESNRVKGSLDFVGINHYTTYYARN 705
Query: 181 QQT 173
+T
Sbjct: 706 NKT 714
Score = 94.1 bits (199), Expect(2) = 2e-023
Identities = 55/117 (47%), Positives = 68/117 (58%)
Frame = +3 / -2
Query: 192 *YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCA 371
*YVV L+P S++P T S GSR T+S I G P +GS N P WKS ALC
Sbjct: 695 *YVV*WLMPTKSNDPFTRFDSSDENNGSRLPTLSLIDAG*SPKTSGSMNHPNWKSWALCV 516
Query: 372 AF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEF 542
A SS E GSYQ+ S+ P LP A + Y++T +A*+R L* T+*GSV EF
Sbjct: 515 AAISSGESDIGSYQITSKATPILPPCFAL*FVLYMSTVLA*ERSTL*ATI*GSVAEF 345
Score = 46.4 bits (95), Expect(3) = 9e-057
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = -3 / +1
Query: 145 SDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEK 20
SD GV +NG IG A S WLYIVP G+ ++NY+K +
Sbjct: 748 SDSGVVTLPFKNGRAIGDKASSAWLYIVPHGIRSLMNYIKRR 873
Score = 36.3 bits (73), Expect(3) = 9e-057
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3 / +1
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPP 572
+A F+ RVK W EP A GYD GL P
Sbjct: 190 FAETCFEKFGDRVKNWMTFNEPHTFAIQGYDIGLSAP 300
Score = 35.0 bits (70), Expect(2) = 2e-023
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +3 / -2
Query: 27 FR*FTTPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSD 146
F *F +P GTM*S E A+ PI PFL TP+S+
Sbjct: 866 FM*FMRLRIP*GTM*SHAEDALSPIALPFLKGRVTTPESE 747
>gb|DR013664.1|DR013664 HEAT1_20_F02.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_20_F02_A029 5', mRNA sequence
Length = 726
Score = 188 bits (405), Expect(2) = 2e-056
Identities = 75/107 (70%), Positives = 87/107 (81%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LLSHATAV YR KYQ QKGK+GI+LDF WYEP TNS+EDQ AAQR
Sbjct: 317 NSATEPYIVAHNLLLSHATAVKIYREKYQPMQKGKIGILLDFVWYEPLTNSSEDQGAAQR 496
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDY 221
+RDFHIGWFL P+ G+YP M +IV RLP FT EQ+++VKGS DY
Sbjct: 497 SRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKEQSQMVKGSIDY 637
Score = 104 bits (222), Expect(2) = 1e-026
Identities = 58/108 (53%), Positives = 68/108 (62%)
Frame = +3 / -1
Query: 219 K*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFV 398
+*S EPLT CS V LGS T+S I GY P + G RN PIWKSL L AA SS+EFV
Sbjct: 639 E*SIEPLTIWDCSFVNLGSLVPTISTIESGYFP*VIGWRNHPIWKSLDL*AAPWSSLEFV 460
Query: 399 KGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEF 542
+GSY KS++IP PF + Y + TAVA + L TM*GSV EF
Sbjct: 459 RGSYHTKSKSIPIFPFCMG*YFSL*IFTAVACESSKLCATM*GSVAEF 316
Score = 51.0 bits (105), Expect(2) = 2e-056
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -3 / +2
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A FKT RVK W EPR+VA GYD G+ P C+
Sbjct: 167 FAEFCFKTFGDRVKYWMTFNEPRVVAALGYDNGIFAPGRCS 289
Score = 35.4 bits (71), Expect(2) = 1e-026
Identities = 19/39 (48%), Positives = 19/39 (48%)
Frame = +3 / -1
Query: 564 HXXGGXSPLS*PXNATILGSXNXXQXLTRXXXVLKXXSA 680
H G PLS*P AT GS N Q T VLK SA
Sbjct: 285 HLPGAKMPLS*PRAATTRGSLNVIQYFTLSPKVLKQNSA 169
>gb|DR178543.1|DR178543 RTMNUT1_12_A07.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_12_A07_A029 5', mRNA sequence
Length = 701
Score = 177 bits (382), Expect(2) = 9e-050
Identities = 70/125 (56%), Positives = 89/125 (71%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LL+H+ V YR KYQ QKG +GIVL +W PF+ S DQ+AA+R
Sbjct: 226 NSATEPYIVTHNMLLAHSAVVKLYRTKYQGIQKGSIGIVLVLSWVVPFSKSKLDQRAARR 405
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
A DF IGWFLDPL+ G+YP ++ +VK RLP FT ++AK +KGS D+ G N YTT Y +
Sbjct: 406 AFDFRIGWFLDPLVLGKYPDSVRRLVKSRLPRFTAKEAKELKGSFDFLGYNYYTTQYTTN 585
Query: 181 QQTPP 167
PP
Sbjct: 586 NPNPP 600
Score = 102 bits (218), Expect = 2e-021
Identities = 56/115 (48%), Positives = 69/115 (60%)
Frame = +3 / -1
Query: 198 VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF 377
VV *L P+ S+EP +S A V GSR T GY P GS+N PI KS AL AA
Sbjct: 569 VV**L*PRKSNEPFSSFASLAVNRGSRDLTNLLTESGYFPNTRGSKNHPILKSNALRAAR 390
Query: 378 *SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEF 542
*SS++F G+ QL +RT+P PF*+ WYL+ Y T R +L T+*GSV EF
Sbjct: 389 *SSLDFENGTTQLSTRTMPMEPF*IPWYLVLYNFTTALCARSILWVTI*GSVAEF 225
Score = 39.6 bits (80), Expect(2) = 9e-050
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3 / +1
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A F+ RVK W + EP + + GYD G+ P C+
Sbjct: 76 FAEECFRAFGDRVKYWVTVNEPLVFSVGGYDLGIHAPGRCS 198
>gb|DR094305.1|DR094305 STRR1_13_F01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_13_F01_A033 5', mRNA sequence
Length = 850
Score = 176 bits (378), Expect(2) = 3e-049
Identities = 70/125 (56%), Positives = 87/125 (69%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LL+H V YR KYQ QKG +GIVL +W PF+ S DQ+AA+R
Sbjct: 354 NSATEPYIVTHNMLLAHRAVVKLYRTKYQGIQKGSIGIVLVVSWVVPFSKSKLDQRAARR 533
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
A DF IGWFLDPL+ G+YP ++ +VK RLP FT ++AK +KGS D+ G N YTT Y
Sbjct: 534 AFDFRIGWFLDPLVLGKYPDSVRRLVKSRLPRFTAKEAKELKGSFDFLGYNYYTTQYTTS 713
Query: 181 QQTPP 167
PP
Sbjct: 714 NPNPP 728
Score = 102 bits (217), Expect = 3e-021
Identities = 56/115 (48%), Positives = 69/115 (60%)
Frame = +3 / -1
Query: 198 VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF 377
VV *L P+ S+EP +S A V GSR T GY P GS+N PI KS AL AA
Sbjct: 697 VV**L*PRKSNEPFSSFASLAVNRGSRDLTNLLTESGYFPNTRGSKNHPILKSNALRAAR 518
Query: 378 *SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEF 542
*SS++F G+ QL +RT+P PF*+ WYL+ Y T R +L T+*GSV EF
Sbjct: 517 *SSLDFENGTTQLTTRTMPMEPF*IPWYLVLYNFTTALCARSILWVTI*GSVAEF 353
Score = 39.6 bits (80), Expect(2) = 3e-049
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3 / +3
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A F+ RVK W + EP + + GYD G+ P C+
Sbjct: 204 FAEECFRAFGDRVKYWVTVNEPLVFSLGGYDLGIHAPGRCS 326
>gb|DR091441.1|DR091441 RTAL1_21_D07.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_21_D07_A029 5', mRNA sequence
Length = 831
Score = 177 bits (381), Expect(2) = 8e-049
Identities = 70/125 (56%), Positives = 88/125 (70%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LL+H+ V YR KYQ QKG +GIVL +W PF+ S DQ+AA+R
Sbjct: 311 NSATEPYIVTHNMLLAHSAVVKLYRTKYQGIQKGSIGIVLVLSWVVPFSKSKLDQRAARR 490
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
A DF IGWFLDPL+ G+YP ++ +VK RLP FT ++AK +KGS D+ G N YTT Y
Sbjct: 491 AFDFRIGWFLDPLVLGKYPDSVRRLVKSRLPRFTAKEAKELKGSFDFLGYNYYTTQYTTS 670
Query: 181 QQTPP 167
PP
Sbjct: 671 NPNPP 685
Score = 104 bits (222), Expect = 6e-022
Identities = 57/115 (49%), Positives = 70/115 (60%)
Frame = +3 / -1
Query: 198 VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF 377
VV *L P+ S+EPL+S A V GSR T GY P GS+N PI KS AL AA
Sbjct: 654 VV**L*PRKSNEPLSSFASLAVNRGSRDLTNLLTESGYFPNTRGSKNHPILKSNALRAAR 475
Query: 378 *SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEF 542
*SS++F G+ QL +RT+P PF*+ WYL+ Y T R +L T+*GSV EF
Sbjct: 474 *SSLDFENGTTQLSTRTMPMEPF*IPWYLVLYNFTTALCARSILWVTI*GSVAEF 310
Score = 36.8 bits (74), Expect(2) = 8e-049
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -3 / +2
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A F+ RVK W + EP + + GYD + P C+
Sbjct: 161 FAEECFRAFGDRVKYWVTVNEPLVFSVGGYDLAIHAPGRCS 283
>gb|CF392740.1|CF392740 RTDR3_5_G10.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_5_G10_A022 5', mRNA
sequence
Length = 741
Score = 168 bits (362), Expect(3) = 1e-048
Identities = 68/124 (54%), Positives = 87/124 (70%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LL+H+ AV YR KYQ QKG +GI L NW P++NS DQ+A QR
Sbjct: 176 NSATEPYIVTHNMLLAHSAAVKLYRTKYQGKQKGSIGIALVVNWMVPYSNSLLDQEATQR 355
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
A DF IGWFL PL +G+YP M+ +V RLP F+ E+AK +KGS D+ G N Y+T + +
Sbjct: 356 AIDFRIGWFLYPLTSGKYPDSMRSLVGARLPLFSSEEAKDLKGSFDFLGFNYYSTDFTIN 535
Query: 181 QQTP 170
TP
Sbjct: 536 NPTP 547
Score = 39.6 bits (80), Expect(3) = 1e-048
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3 / +2
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A F+ RVK W + EP + GYD GL P C+
Sbjct: 26 FAEECFRAFGDRVKYWTTINEPLTFSLYGYDLGLHAPGRCS 148
Score = 24.0 bits (46), Expect(3) = 1e-048
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -3 / +2
Query: 61 PSGMYGVVNYLKEKY 17
P+G+ V+NY K +Y
Sbjct: 659 PAGLRDVINYTKHRY 703
>gb|CF390924.1|CF390924 RTDR3_2_H05.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_2_H05_A022 5', mRNA
sequence
Length = 685
Score = 172 bits (371), Expect(2) = 3e-048
Identities = 69/124 (55%), Positives = 88/124 (70%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LL+H+ AV YR KYQ QKG +GI L NW P++NS DQ+A QR
Sbjct: 234 NSATEPYIVTHNMLLAHSAAVKLYRTKYQGKQKGSIGIALVVNWMVPYSNSLLDQEATQR 413
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
A DF IGWFLDPL +G+YP M+ +V RLP F+ E+AK +KGS D+ G N Y+T + +
Sbjct: 414 AIDFRIGWFLDPLTSGKYPDSMRSLVGARLPLFSSEEAKDLKGSFDFLGFNYYSTDFTIN 593
Query: 181 QQTP 170
TP
Sbjct: 594 NPTP 605
Score = 39.6 bits (80), Expect(2) = 3e-048
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3 / +3
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A F+ RVK W + EP + GYD GL P C+
Sbjct: 84 FAEECFRAFGDRVKYWTTINEPLTFSLYGYDLGLHAPGRCS 206
>gb|AF072736.1|AF072736 Pinus contorta beta-glucosidase mRNA, complete cds
Length = 1909
Score = 151 bits (325), Expect(3) = 3e-048
Identities = 57/122 (46%), Positives = 80/122 (65%)
Frame = -3 / +3
Query: 556 CTAXXNSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQ 377
C SS EPY+ H++LL+HA+AV +YR KYQ Q G +G+V+ WYEP NS E++
Sbjct: 837 CMTGNCSSAEPYLAAHHVLLAHASAVEKYREKYQKIQGGSIGLVISAPWYEPLENSPEER 1016
Query: 376 KAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTT 197
A R F++ WFLDP++ G YP+ M++ + RLPS + E + ++GS DY GIN YTT
Sbjct: 1017 SAVDRILSFNLRWFLDPIVFGDYPQEMRERLGSRLPSISSELSAKLRGSFDYMGINHYTT 1196
Query: 196 YY 191
Y
Sbjct: 1197 LY 1202
Score = 41.8 bits (85), Expect(3) = 3e-048
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3 / +3
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXC 563
YA F+ RVK W + EP + GY G+ PP C
Sbjct: 693 YAEICFRAFGDRVKYWATVNEPNLFVPLGYTVGIFPPTRC 812
Score = 36.8 bits (74), Expect(3) = 3e-048
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -3 / +3
Query: 118 QRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
+R+GV IG+ L++VP G+ +V Y+KE Y
Sbjct: 1278 ERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFY 1379
>gb|DR744730.1|DR744730 RTCU1_24_B09.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_24_B09_A029 5', mRNA sequence
Length = 742
Score = 106 bits (226), Expect(4) = 2e-047
Identities = 41/69 (59%), Positives = 51/69 (73%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LL+H+ V YR KYQ QKG +GIVL +W PF+ S DQ+AA+R
Sbjct: 138 NSATEPYIVTHNMLLAHSAVVKLYRTKYQGIQKGSIGIVLVLSWVVPFSKSKLDQRAARR 317
Query: 361 ARDFHIGWF 335
A DF IGW+
Sbjct: 318 AFDFRIGWY 344
Score = 75.8 bits (159), Expect(4) = 2e-047
Identities = 29/57 (50%), Positives = 39/57 (68%)
Frame = -3 / +3
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPP 167
FLDPL+ G+YP ++ +VK RLP FT ++AK +KGS D+ G N YTT Y + PP
Sbjct: 378 FLDPLVLGKYPDSVRRLVKSRLPRFTAKEAKELKGSFDFLGYNYYTTQYTTNNPNPP 548
Score = 38.2 bits (77), Expect(4) = 2e-047
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3 / +3
Query: 667 FKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
F+ RVK W + EP + + GYD G+ P C+
Sbjct: 3 FRAFGDRVKYWVTVNEPLVFSVGGYDLGIHAPGRCS 110
Score = 25.4 bits (49), Expect(4) = 2e-047
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -3 / +3
Query: 61 PSGMYGVVNYLKEKY 17
P+G+ V+NY+K +Y
Sbjct: 657 PAGLRDVINYIKHRY 701
>gb|DR054674.1|DR054674 RTCA1_18_G02.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_18_G02_A029 5', mRNA sequence
Length = 784
Score = 157 bits (338), Expect(2) = 3e-047
Identities = 62/86 (72%), Positives = 71/86 (82%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LLSHATAV YR KYQ QKGK+GI+LDF WYEP TNS+EDQ AAQR
Sbjct: 520 NSATEPYIVAHNLLLSHATAVKIYREKYQPMQKGKIGILLDFVWYEPLTNSSEDQGAAQR 699
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIV 284
+RDFHIGWFL P+ G+YP M +IV
Sbjct: 700 SRDFHIGWFLHPITYGKYPDSMVEIV 777
Score = 87.2 bits (184), Expect(2) = 2e-021
Identities = 46/86 (53%), Positives = 55/86 (63%)
Frame = +3 / -3
Query: 285 TMSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYL 464
T+S I GY P + G RN PIWKSL L AA SS+EFV+GSY KS++IP PF + Y
Sbjct: 776 TISTIESGYFP*VIGWRNHPIWKSLDL*AAPWSSLEFVRGSYHTKSKSIPIFPFCMG*YF 597
Query: 465 LRYLATAVA*DRRML*TTM*GSVDEF 542
+ TAVA + L TM*GSV EF
Sbjct: 596 SL*IFTAVACESSKLCATM*GSVAEF 519
Score = 51.0 bits (105), Expect(2) = 3e-047
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -3 / +1
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A FKT RVK W EPR+VA GYD G+ P C+
Sbjct: 370 FAEFCFKTFGDRVKYWMTFNEPRVVAALGYDNGIFAPGRCS 492
Score = 35.4 bits (71), Expect(2) = 2e-021
Identities = 19/39 (48%), Positives = 19/39 (48%)
Frame = +3 / -3
Query: 564 HXXGGXSPLS*PXNATILGSXNXXQXLTRXXXVLKXXSA 680
H G PLS*P AT GS N Q T VLK SA
Sbjct: 488 HLPGAKMPLS*PRAATTRGSLNVIQYFTLSPKVLKQNSA 372
>gb|DR743237.1|DR743237 RTCU1_14_B08.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_14_B08_A029 5', mRNA sequence
Length = 711
Score = 158 bits (340), Expect(2) = 6e-047
Identities = 64/120 (53%), Positives = 81/120 (67%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+ EPYIV H++LLSH AV YR YQA QKG +G+V+ N P TN + D A QR
Sbjct: 191 NSTVEPYIVGHHVLLSHIAAVELYRKNYQAKQKGWIGLVILVNRMIPLTNKSTDVAATQR 370
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
A DF +GWFLDP ++G YP M++IV RLPSFT EQ + ++GS D+ G+N Y T Y D
Sbjct: 371 ANDFKVGWFLDPFVSGDYPGSMRNIVGSRLPSFTKEQTQKLQGSLDFIGVNHYFTIYCFD 550
Score = 49.2 bits (101), Expect(2) = 6e-047
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -3 / +2
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQ 557
YA F+ RVK W EP I A GYD+G PP C+Q
Sbjct: 41 YADVCFREFGDRVKYWSTFNEPNIFAIAGYDQGFFPP*RCSQ 166
>gb|DR388562.1|DR388562 RTHG1_29_B07.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_29_B07_A029 3', mRNA sequence
Length = 692
Score = 157 bits (338), Expect(2) = 8e-046
Identities = 62/120 (51%), Positives = 85/120 (70%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NSSTEPYI HNIL +HA+AV YR +YQA Q+G +GIV+ W EP N+++D A QR
Sbjct: 169 NSSTEPYIAAHNILRAHASAVQLYRKEYQADQEGLIGIVMACAWREPLLNNSQDISAVQR 348
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
DF IGW+LDP++ G+YP MQ++V RLP T + ++ ++GS D+ G+N Y+T Y AD
Sbjct: 349 LLDFSIGWYLDPIVFGEYPTSMQELVGTRLPIITLDLSEKLRGSYDFIGVNYYSTAYGAD 528
Score = 46.4 bits (95), Expect(2) = 8e-046
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = -3 / +1
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
YA FK RVK W EP I GYD G PP C+
Sbjct: 19 YAEACFKNFGGRVKYWSTFNEPNIFVPEGYDAGKYPPARCS 141
>gb|DR093835.1|DR093835 STRR1_10_E06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_10_E06_A033 5', mRNA sequence
Length = 788
Score = 183 bits (395), Expect = 8e-046
Identities = 72/127 (56%), Positives = 89/127 (70%)
Frame = -3 / -1
Query: 397 TNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYF 218
TNS+EDQ AAQR+RDFHIGWFL P+ G+YP M +IV RLP FT +Q+++VKGS DY
Sbjct: 788 TNSSEDQGAAQRSRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKKQSQMVKGSIDYL 609
Query: 217 GINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVV 38
G+NQYT YY+ D + P Q Y DW + + RNGV IG A+S WLYIVP G+Y V
Sbjct: 608 GVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAV 429
Query: 37 NYLKEKY 17
Y+KE Y
Sbjct: 428 TYVKEHY 408
>gb|DR690593.1|DR690593 EST1080679 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACW86 3' end, mRNA sequence
Length = 754
Score = 164 bits (352), Expect(2) = 4e-045
Identities = 62/118 (52%), Positives = 85/118 (72%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
+SSTEPY+ HN LL+HA AV YR K+Q Q G +GI +D W EPFT++ D++AAQR
Sbjct: 36 DSSTEPYLAAHNQLLAHAAAVDIYRKKFQDKQGGVIGITVDGEWAEPFTDAEGDKEAAQR 215
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYI 188
R+F GWFLDP+ G YP IM+ + DRLP F+P++ +++GSSD+ G+N YTT Y+
Sbjct: 216 RREFQFGWFLDPIYFGDYPAIMRKKLGDRLPQFSPDEVAVLRGSSDFLGLNHYTTRYV 389
Score = 37.7 bits (76), Expect(2) = 4e-045
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -3 / +3
Query: 109 GVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
G IG+ A S WLYIVP G V+ +L E+Y
Sbjct: 465 GNTIGERAASEWLYIVPWGFRKVLKWLTERY 557
>gb|DT636173.1|DT636173 EST1151104 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGO78 3' end, mRNA sequence
Length = 706
Score = 164 bits (352), Expect(2) = 4e-045
Identities = 62/118 (52%), Positives = 85/118 (72%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
+SSTEPY+ HN LL+HA AV YR K+Q Q G +GI +D W EPFT++ D++AAQR
Sbjct: 44 DSSTEPYLAAHNQLLAHAAAVDIYRKKFQDKQGGVIGITVDGEWAEPFTDAEGDKEAAQR 223
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYI 188
R+F GWFLDP+ G YP IM+ + DRLP F+P++ +++GSSD+ G+N YTT Y+
Sbjct: 224 RREFQFGWFLDPIYFGDYPAIMRKKLGDRLPQFSPDEVAVLRGSSDFLGLNHYTTRYV 397
Score = 37.7 bits (76), Expect(2) = 4e-045
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -3 / +2
Query: 109 GVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
G IG+ A S WLYIVP G V+ +L E+Y
Sbjct: 473 GNTIGERAASEWLYIVPWGFRKVLKWLTERY 565
>gb|AW056671.1|AW056671 ST54D07 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST54D07, mRNA sequence
Length = 432
Score = 150 bits (322), Expect(2) = 5e-045
Identities = 58/79 (73%), Positives = 66/79 (83%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LLSHATAV YR KYQ QKGK+GI+LDF WYEP TNS+EDQ AAQR
Sbjct: 193 NSATEPYIVAHNLLLSHATAVKIYREKYQPMQKGKIGILLDFVWYEPLTNSSEDQGAAQR 372
Query: 361 ARDFHIGWFLDPLINGQYP 305
+RDFHIGWFL P+ +YP
Sbjct: 373 SRDFHIGWFLHPITXXKYP 429
Score = 51.0 bits (105), Expect(2) = 5e-045
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -3 / +1
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A FKT RVK W EPR+VA GYD G+ P C+
Sbjct: 43 FAEFCFKTFGDRVKYWMTFNEPRVVAALGYDNGIFAPGRCS 165
>gb|DR019640.1|DR019640 STRS1_31_H11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_H11_A034 3', mRNA sequence
Length = 794
Score = 178 bits (383), Expect = 4e-044
Identities = 70/123 (56%), Positives = 85/123 (69%)
Frame = -3 / +2
Query: 385 EDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQ 206
EDQ AAQR+RDFHIGWFL P+ G+YP M +IV RLP FT EQ+++VKGS DY G+NQ
Sbjct: 2 EDQGAAQRSRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVNQ 181
Query: 205 YTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLK 26
YT YY+ D + P Q Y DW + + RNGV IG A+S WLYIVP G+Y V Y+K
Sbjct: 182 YTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVK 361
Query: 25 EKY 17
E Y
Sbjct: 362 EHY 370
>gb|CX651881.1|CX651881 COLD1_55_A04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_55_A04_A029 5', mRNA sequence
Length = 533
Score = 122 bits (262), Expect(3) = 4e-044
Identities = 47/83 (56%), Positives = 61/83 (73%)
Frame = -3 / +2
Query: 448 QKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLP 269
Q G +GI LD W+EP T+ +EDQ AAQRA DF +GWF+DPL G YP M+ +V DRLP
Sbjct: 284 QGGSIGITLDSMWFEPITDLSEDQDAAQRALDFQLGWFMDPLYFGDYPASMRQLVGDRLP 463
Query: 268 SFTPEQAKLVKGSSDYFGINQYT 200
F+ +Q+KL++GS D+ GIN YT
Sbjct: 464 VFSNDQSKLLRGSFDFVGINHYT 532
Score = 51.5 bits (106), Expect(3) = 4e-044
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQ 455
NSSTEPYIV HN+LLSHA AV YR +++
Sbjct: 194 NSSTEPYIVAHNLLLSHAAAVDIYRQQFK 280
Score = 42.3 bits (86), Expect(3) = 4e-044
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3 / +2
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
YA F+ RVK W EPR ++ GYD G+ P C+
Sbjct: 41 YAEACFQAFGDRVKHWITFNEPRGISIHGYDIGIQAPGRCS 163
>gb|DR387566.1|DR387566 RTHG1_22_E08.g2_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_22_E08_A029 5', mRNA sequence
Length = 607
Score = 160 bits (343), Expect(2) = 7e-044
Identities = 60/115 (52%), Positives = 83/115 (72%)
Frame = -3 / -1
Query: 532 TEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARD 353
TEPY+V HN LL+HA AV +R K+Q Q G +GI +D W EPFT++ D++AAQR R+
Sbjct: 607 TEPYLVAHNQLLAHAAAVDIFRKKFQDKQGGVIGITVDGEWAEPFTDAEGDKEAAQRRRE 428
Query: 352 FHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYI 188
F GWFLDP+ G YP IM+ + DRLP F+P++ +++GSSD+ G+N YTT Y+
Sbjct: 427 FQFGWFLDPIYFGDYPAIMRKKLGDRLPQFSPDEVAVLRGSSDFLGLNHYTTRYV 263
Score = 37.7 bits (76), Expect(2) = 7e-044
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -3 / -1
Query: 109 GVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
G IG+ A S WLYIVP G V+ +L E+Y
Sbjct: 187 GNTIGERAASEWLYIVPWGFRKVLKWLTERY 95
>gb|DR019670.1|DR019670 STRS1_31_D05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_D05_A034 5', mRNA sequence
Length = 756
Score = 176 bits (378), Expect = 2e-043
Identities = 69/122 (56%), Positives = 84/122 (68%)
Frame = -3 / -1
Query: 382 DQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQY 203
DQ AAQR+RDFHIGWFL P+ G+YP M +IV RLP FT EQ+++VKGS DY G+NQY
Sbjct: 756 DQGAAQRSRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVNQY 577
Query: 202 TTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKE 23
T YY+ D + P Q Y DW + + RNGV IG A+S WLYIVP G+Y V Y+KE
Sbjct: 576 TAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 397
Query: 22 KY 17
Y
Sbjct: 396 HY 391
>gb|CX649586.1|CX649586 COLD1_36_E07.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_36_E07_A029 3', mRNA sequence
Length = 753
Score = 151 bits (324), Expect(2) = 5e-041
Identities = 57/122 (46%), Positives = 80/122 (65%)
Frame = -3 / -3
Query: 556 CTAXXNSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQ 377
C SS EPY+ H++LL+HA+AV +YR KYQ Q G +G+V+ WYEP NS E++
Sbjct: 688 CITGNCSSAEPYLAAHHVLLAHASAVEKYREKYQKFQGGSIGLVISAPWYEPLENSPEER 509
Query: 376 KAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTT 197
A R F++ WFLDP++ G YP+ M++ + RLPS + E + ++GS DY GIN YTT
Sbjct: 508 SAVDRILSFNLRWFLDPIVFGDYPQEMRERLGSRLPSISSELSAKLRGSFDYMGINHYTT 329
Query: 196 YY 191
Y
Sbjct: 328 LY 323
Score = 36.8 bits (74), Expect(2) = 5e-041
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -3 / -3
Query: 118 QRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
+R+GV IG+ L++VP G+ +V Y+KE Y
Sbjct: 247 ERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFY 146
>gb|CO162287.1|CO162287 FLD1_34_H05.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_34_H05_A029 3', mRNA sequence
Length = 718
Score = 151 bits (324), Expect(2) = 5e-041
Identities = 57/122 (46%), Positives = 80/122 (65%)
Frame = -3 / -3
Query: 556 CTAXXNSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQ 377
C SS EPY+ H++LL+HA+AV +YR KYQ Q G +G+V+ WYEP NS E++
Sbjct: 710 CITGNCSSAEPYLAAHHVLLAHASAVEKYREKYQKFQGGSIGLVISAPWYEPLENSPEER 531
Query: 376 KAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTT 197
A R F++ WFLDP++ G YP+ M++ + RLPS + E + ++GS DY GIN YTT
Sbjct: 530 SAVDRILSFNLRWFLDPIVFGDYPQEMRERLGSRLPSISSELSAKLRGSFDYMGINHYTT 351
Query: 196 YY 191
Y
Sbjct: 350 LY 345
Score = 36.8 bits (74), Expect(2) = 5e-041
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -3 / -3
Query: 118 QRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
+R+GV IG+ L++VP G+ +V Y+KE Y
Sbjct: 269 ERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFY 168
>gb|DR081852.1|DR081852 RTFEPL1_32_F12.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_32_F12_A029 5', mRNA sequence
Length = 648
Score = 159 bits (342), Expect(2) = 7e-041
Identities = 65/148 (43%), Positives = 96/148 (64%)
Frame = -3 / +1
Query: 529 EPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDF 350
E Y H +LL+HATAV YR+KY+ QKG +G+ L NW P+++S +DQ AAQRA DF
Sbjct: 25 EMYTAGHYMLLAHATAVEVYRSKYKVEQKGCIGLTLVCNWTYPYSSSQDDQNAAQRAVDF 204
Query: 349 HIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTP 170
+GWF+DP+ +G YP M+D + DRL FT ++++ +KGS D+ G+N YT+ Y + P
Sbjct: 205 MLGWFIDPVTSGDYPFTMRDRLGDRLLKFTEQESEQLKGSFDFLGMNYYTSQYAINCLDP 384
Query: 169 PQGPPSYSSDWGVQYYFQRNGVQIGQMA 86
+ ++ D G + +R+GV IG A
Sbjct: 385 TKANSGWNRDSGANFISERSGVPIGVKA 468
Score = 28.1 bits (55), Expect(2) = 7e-041
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -3 / +1
Query: 82 SIWLYIVPSGMYGVVNYLKEKY 17
S WLY+ G+ ++ Y+K++Y
Sbjct: 469 SFWLYVYAPGLRDLLIYIKQRY 534
>gb|DR385449.1|DR385449 RTHG1_8_F01.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_8_F01_A029 5', mRNA sequence
Length = 860
Score = 74.8 bits (157), Expect(4) = 4e-040
Identities = 29/57 (50%), Positives = 38/57 (66%)
Frame = -3 / +3
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPP 167
FLDPL+ G+YP ++ +VK RLP FT ++AK +KGS D+ G N YTT Y PP
Sbjct: 684 FLDPLVLGKYPDPVRRLVKSRLPRFTAKEAKELKGSFDFLGYNYYTTQYTTSNPNPP 854
Score = 65.2 bits (136), Expect(4) = 4e-040
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = -3 / +3
Query: 472 YRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWF 335
+ NK Q QKG +GIVL +W PF+ S DQ+AA+RA DF IGW+
Sbjct: 414 WENKLQGIQKGSIGIVLVVSWVVPFSKSKLDQRAARRAFDFRIGWY 551
Score = 51.5 bits (106), Expect(4) = 4e-040
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQ 455
NS+TEPYIV HN+LL+H+ V YR KYQ
Sbjct: 243 NSATEPYIVTHNMLLAHSAVVRLYRTKYQ 329
Score = 33.1 bits (66), Expect(4) = 4e-040
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3 / +3
Query: 667 FKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
F+ RVK W + P + + GYD G+ P C+
Sbjct: 108 FEPFGDRVKYWVTVN*PLVFSLGGYDLGIHAPGRCS 215
>gb|CF390174.1|CF390174 RTDR2_12_E07.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_12_E07_A021 5', mRNA
sequence
Length = 663
Score = 162 bits (349), Expect = 2e-039
Identities = 66/150 (44%), Positives = 96/150 (64%)
Frame = -3 / +2
Query: 535 STEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRAR 356
++E Y V H+ILL+HA AV YR KYQ QKG +GI L N P++ S +DQ AAQR
Sbjct: 14 ASEIYTVAHHILLAHAAAVEAYRTKYQVEQKGSIGITLVCNGTYPYSASLDDQNAAQRVI 193
Query: 355 DFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQ 176
DF +GWF+DP+ +G YP M++ + +RLP FT +Q++ +KG+ D+ G+N YT+ Y +
Sbjct: 194 DFTLGWFMDPITSGSYPTTMKERIGNRLPKFTEQQSQQLKGTFDFIGVNYYTSQYAINCP 373
Query: 175 TPPQGPPSYSSDWGVQYYFQRNGVQIGQMA 86
P ++ D G + +RNGV IG+ A
Sbjct: 374 EPTSQMSCWNLDCGARCVCERNGVWIGRKA 463
>gb|CO362034.1|CO362034 NDL2_8_E08.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_E08_A029 5', mRNA sequence
Length = 729
Score = 162 bits (349), Expect = 2e-039
Identities = 63/117 (53%), Positives = 86/117 (73%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
+S+TEPYIV HN+LL+H+ AV Y+ KYQ QKG +GIVL +W PF+ S++DQ A QR
Sbjct: 376 DSATEPYIVGHNMLLAHSAAVKIYKTKYQGKQKGSIGIVLTASWMVPFSESSQDQMATQR 555
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
A DF IGW L+PL +G+YP M+ +V RLP FT ++A+ +KGS D+ G N Y+TY+
Sbjct: 556 AIDFRIGWILEPLTSGKYPDSMRKLVGARLPRFTSQEARELKGSFDFLGYNYYSTYF 726
>gb|CR394381.1|CR394381 CR394381 RN Pinus pinaster cDNA clone RN78E02, mRNA sequence
Length = 461
Score = 142 bits (305), Expect(2) = 4e-039
Identities = 56/97 (57%), Positives = 71/97 (73%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LL+H+ V YR KYQ QKG +GIVL +W PF+ S DQ+AA+R
Sbjct: 171 NSATEPYIVTHNMLLAHSAVVKLYRTKYQGIQKGSIGIVLVVSWMVPFSKSKLDQRAARR 350
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQ 251
A DF IGWFLDPL+ G+YP + +VK RLP FT ++
Sbjct: 351 AFDFRIGWFLDPLVLGKYPDSVTRLVKSRLPQFTDKE 461
Score = 39.1 bits (79), Expect(2) = 4e-039
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3 / +3
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A F+ RVK W + EP + + GYD G+ P C+
Sbjct: 21 FAEECFRAFGDRVKYWVTVNEPLVFSVGGYDLGVHAPGRCS 143
>gb|AW010487.1|AW010487 ST07D06 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST07D06, mRNA sequence
Length = 811
Score = 95.9 bits (203), Expect(3) = 2e-035
Identities = 37/73 (50%), Positives = 47/73 (64%)
Frame = -3 / +3
Query: 325 LINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYS 146
L NG+YP M +IV RLP FT EQ+++VKGS DY G+NQYT YY+ D + P Q Y
Sbjct: 60 LPNGKYPGSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQ 239
Query: 145 SDWGVQYYFQRNG 107
DW + + RNG
Sbjct: 240 MDWNTGFAYARNG 278
Score = 47.8 bits (98), Expect(3) = 2e-035
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -3 / +1
Query: 109 GVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
GV IG A+S WLYIVP G+Y V Y+KE Y
Sbjct: 277 GVPIGPRANSNWLYIVPWGLYKAVTYVKEHY 369
Score = 43.7 bits (89), Expect(3) = 2e-035
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3 / +2
Query: 382 DQKAAQRARDFHIGWFLDPL 323
DQ AAQR++DFHIGWFL P+
Sbjct: 2 DQGAAQRSKDFHIGWFLHPI 61
>gb|CO199490.1|CO199490 GEO2_1_C06.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_1_C06_A032 5', mRNA sequence
Length = 791
Score = 127 bits (271), Expect(2) = 1e-034
Identities = 49/79 (62%), Positives = 60/79 (75%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LL+H+ V YR KYQ QKG +GIVL +W PF+ S DQ+AA+R
Sbjct: 546 NSATEPYIVTHNMLLAHSAVVKLYRTKYQGIQKGSIGIVLVLSWVVPFSKSKLDQRAARR 725
Query: 361 ARDFHIGWFLDPLINGQYP 305
A DF IGWFLDPL+ G+YP
Sbjct: 726 AFDFRIGWFLDPLVLGKYP 782
Score = 39.6 bits (80), Expect(2) = 1e-034
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3 / +3
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A F+ RVK W + EP + + GYD G+ P C+
Sbjct: 396 FAEECFRAFGDRVKYWVTVNEPLVFSVGGYDLGIHAPGRCS 518
>gb|CO174896.1|CO174896 NDL1_47_A06.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_47_A06_A029 3', mRNA sequence
Length = 596
Score = 79.9 bits (168), Expect(3) = 2e-031
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = -3 / -1
Query: 448 QKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIM 296
Q G +GI LD W+EP T+ +EDQ AAQRA DF +GWF+DPL G YP M
Sbjct: 155 QGGSIGITLDSMWFEPITDLSEDQDAAQRALDFQLGWFMDPLYFGDYPASM 3
Score = 51.5 bits (106), Expect(3) = 2e-031
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -3 / -1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQ 455
NSSTEPYIV HN+LLSHA AV YR +++
Sbjct: 245 NSSTEPYIVAHNLLLSHAAAVDIYRQQFK 159
Score = 42.3 bits (86), Expect(3) = 2e-031
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3 / -1
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
YA F+ RVK W EPR ++ GYD G+ P C+
Sbjct: 398 YAEACFQAFGDRVKHWITFNEPRGISIHGYDIGIQAPGRCS 276
>gb|DR055729.1|DR055729 RTCA1_25_C02.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_25_C02_A029 5', mRNA sequence
Length = 687
Score = 132 bits (282), Expect = 3e-030
Identities = 52/98 (53%), Positives = 64/98 (65%)
Frame = -3 / -3
Query: 310 YPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGV 131
YP M +IV RLP FT EQ+++VKGS DY G+NQYT YY+ D + P Q Y DW
Sbjct: 685 YPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNT 506
Query: 130 QYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
+ + RNGV IG A+S WLYIVP G+Y V Y+KE Y
Sbjct: 505 GFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHY 392
>gb|CF666831.1|CF666831 RTCNT1_26_A11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_26_A11_A029 5', mRNA sequence
Length = 860
Score = 98.2 bits (208), Expect(2) = 2e-029
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTN 392
NS+TEPYIV HN+LLSHATAV YR KYQ QKGK+GI+LDF WYEP TN
Sbjct: 709 NSATEPYIVAHNLLLSHATAVKIYREKYQPMQKGKIGILLDFVWYEPLTN 858
Score = 51.0 bits (105), Expect(2) = 2e-029
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -3 / +1
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A FKT RVK W EPR+VA GYD G+ P C+
Sbjct: 559 FAEFCFKTFGDRVKYWMTFNEPRVVAALGYDNGIFAPGRCS 681
>gb|BI643956.1|BI643956 NXPV_133_B02_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_133_B02 5' similar to Arabidopsis
thaliana sequence At5g36890 beta-glucosidase -like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 364
Score = 129 bits (276), Expect = 2e-029
Identities = 51/96 (53%), Positives = 66/96 (68%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
+SSTEPY+V HN LL+HA AV YR K+Q Q G + I +D W EPFT++ D++AA R
Sbjct: 67 DSSTEPYLVAHNQLLAHAAAVDIYRKKFQDKQGGVIXITVDGEWAEPFTDAEGDKEAAXR 246
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPE 254
R+F GWFLDP+ G YP IM+ DRLP F+P+
Sbjct: 247 RREFQFGWFLDPIYFGDYPAIMRKXXGDRLPQFSPD 354
>gb|BG318692.1|BG318692 NXPV_015_G08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_015_G08 5' similar to Arabidopsis
thaliana sequence At5g36890 beta-glucosidase -like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 366
Score = 128 bits (275), Expect = 3e-029
Identities = 51/96 (53%), Positives = 66/96 (68%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
+SSTEPY+V HN LL+HA AV YR K+Q Q G +GI +D W EPFT++ D++AAQR
Sbjct: 67 DSSTEPYLVAHNQLLAHAAAVDIYRKKFQDKQGGVIGITVDGEWAEPFTDAEGDKEAAQR 246
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPE 254
R+F GWFLDP+ G YP M + DRL F+P+
Sbjct: 247 RREFQFGWFLDPIYXGDYPAXMXXKLGDRLXQFSPD 354
>gb|BI397619.1|BI397619 NXPV_102_C02_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_102_C02 5' similar to Arabidopsis
thaliana sequence At5g36890 beta-glucosidase -like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 481
Score = 127 bits (273), Expect = 6e-029
Identities = 54/113 (47%), Positives = 72/113 (63%)
Frame = -3 / +1
Query: 535 STEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRAR 356
STEPY+V HN LL+HA AV YR K+Q Q G +GI +D PFT++ D++AAQR R
Sbjct: 73 STEPYLVAHNQLLAHAAAVDIYRKKFQDKQGGVIGITVDGEXA*PFTDAEGDKEAAQRRR 252
Query: 355 DFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTT 197
+F GWFLDP G YP IM+ + D LP +P+ + +GS + G+N TT
Sbjct: 253 EFQFGWFLDPKXFGDYPAIMRQKLGDPLPQXSPDXXAVWRGSXVFLGLNH*TT 411
>gb|CF671986.1|CF671986 RTCNT1_60_C07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_60_C07_A029 5', mRNA sequence
Length = 792
Score = 105 bits (223), Expect(2) = 9e-029
Identities = 38/81 (46%), Positives = 53/81 (65%)
Frame = -3 / +3
Query: 556 CTAXXNSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQ 377
C SS EPY+ H++LL+HA+AV +YR KYQ Q G +G+V+ WYEP NS E++
Sbjct: 546 CITGNCSSAEPYLAAHHVLLAHASAVEKYREKYQKIQGGSIGLVISAPWYEPLENSPEER 725
Query: 376 KAAQRARDFHIGWFLDPLING 314
A R F++ WFLDP++ G
Sbjct: 726 LAVDRILSFNLRWFLDPIVFG 788
Score = 41.8 bits (85), Expect(2) = 9e-029
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3 / +3
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXC 563
YA F+ RVK W + EP + GY G+ PP C
Sbjct: 402 YAEICFRAFGDRVKYWATVNEPNLFVPLGYTVGIFPPTRC 521
>gb|DR095084.1|DR095084 STRR1_18_E04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_18_E04_A033 5', mRNA sequence
Length = 813
Score = 117 bits (251), Expect(2) = 2e-028
Identities = 46/110 (41%), Positives = 71/110 (64%)
Frame = -3 / +1
Query: 415 NWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVK 236
NW P+++S +DQ AAQRA DF +GWF+DP+ +G YP M+D + DRL FT ++++ +K
Sbjct: 10 NWTYPYSSSQDDQNAAQRAVDFMLGWFIDPVTSGDYPFTMRDRLGDRLLKFTEQESEQLK 189
Query: 235 GSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMA 86
GS D+ G+N YT+ Y + P + ++ D G + +R+GV IG A
Sbjct: 190 GSFDFLGMNYYTSQYAINCLDPTKANSGWNRDSGANFISERSGVPIGVKA 339
Score = 28.1 bits (55), Expect(2) = 2e-028
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -3 / +1
Query: 82 SIWLYIVPSGMYGVVNYLKEKY 17
S WLY+ G+ ++ Y+K++Y
Sbjct: 340 SFWLYVYAPGLRDLLIYIKQRY 405
>gb|DR019869.1|DR019869 STRS1_33_B04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_33_B04_A034 3', mRNA sequence
Length = 868
Score = 95.9 bits (203), Expect(2) = 2e-028
Identities = 36/67 (53%), Positives = 49/67 (73%)
Frame = -3 / +2
Query: 373 AAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTY 194
A QRA+DF +GWF+DPL+ G YP M++ V +RLP F+ E++ VKGS D+ GIN YTTY
Sbjct: 5 ATQRAQDFQLGWFMDPLVFGDYPASMRERVGNRLPLFSSEESNRVKGSLDFVGINHYTTY 184
Query: 193 YIADQQT 173
Y + +T
Sbjct: 185 YARNNKT 205
Score = 49.6 bits (102), Expect(2) = 2e-028
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -3 / +2
Query: 145 SDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
SD GV +NG IG A S WLYIVP G+ ++NY+K +Y
Sbjct: 239 SDSGVVTLPFKNGRAIGDKASSAWLYIVPHGIRSLMNYIKRRY 367
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 353,956,341
Number of Sequences: 355925
Number of extensions: 5082161
Number of successful extensions: 35679
Number of sequences better than 1.0e-020: 65
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 9651258455
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)