TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= M73028.2.1
(1802 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF667523.1|CF667523 RTCNT1_30_H07.g1_A029 Root control P... 226 3e-058
gb|CF477905.1|CF477905 RTWW3_13_C03.g1_A022 Well-watered lo... 223 3e-057
gb|CF671993.1|CF671993 RTCNT1_60_D02.g1_A029 Root control P... 223 3e-057
gb|CO361899.1|CO361899 NDL2_7_G04.g1_A029 Needles control 2... 223 3e-057
gb|DR694940.1|DR694940 EST1085033 Normalized pine embryo li... 222 5e-057
gb|DT639133.1|DT639133 EST1154064 Normalized pine embryo li... 222 5e-057
gb|DR110104.1|DR110104 RTS1_8_C03.g1_A029 Roots minus sulfu... 222 7e-057
gb|AW011253.1|AW011253 ST18F02 Pine TriplEx shoot tip libra... 221 9e-057
gb|CF391376.1|CF391376 RTDR3_1_G04.g1_A022 Loblolly pine ro... 221 1e-056
gb|CO200901.1|CO200901 RTCNT2_2_G06.b1_A029 Root control 2 ... 221 2e-056
gb|CF388213.1|CF388213 RTDR2_1_B07.g1_A021 Loblolly pine ro... 220 3e-056
gb|CX650454.1|CX650454 COLD1_45_F10.g1_A029 Root cold Pinus... 220 3e-056
gb|DR023090.1|DR023090 STRS1_55_A05.g1_A034 Shoot tip pitch... 220 3e-056
gb|DR024153.1|DR024153 STRS1_62_E05.g1_A034 Shoot tip pitch... 220 3e-056
gb|DR161451.1|DR161451 RTFE1_11_H03.g1_A029 Roots minus iro... 220 3e-056
gb|DR060728.1|DR060728 RTNIT1_29_D06.g1_A029 Roots minus ni... 219 4e-056
gb|DR161095.1|DR161095 RTFE1_9_G03.g1_A029 Roots minus iron... 219 4e-056
gb|BF517838.1|BF517838 NXSI_027_G09_F NXSI (Nsf Xylem Side ... 219 6e-056
gb|CF668816.1|CF668816 RTCNT1_38_G11.g1_A029 Root control P... 219 6e-056
gb|CO158547.1|CO158547 FLD1_7_D03.g1_A029 Root flooded Pinu... 218 8e-056
gb|CF393225.1|CF393225 RTDR3_17_D12.g1_A022 Loblolly pine r... 218 1e-055
gb|CF472757.1|CF472757 RTDS1_11_D09.g1_A015 Drought-stresse... 218 1e-055
gb|CO367178.1|CO367178 RTK1_32_E03.g1_A029 Roots minus pota... 218 1e-055
gb|CF391408.1|CF391408 RTDR3_1_E10.g1_A022 Loblolly pine ro... 217 2e-055
gb|CF394327.1|CF394327 RTDS2_4_B08.g1_A021 Drought-stressed... 217 2e-055
gb|CF395727.1|CF395727 RTDS2_16_B07.g1_A021 Drought-stresse... 217 2e-055
gb|BX681391.1|BX681391 BX681391 RS Pinus pinaster cDNA clon... 217 2e-055
gb|DR058733.1|DR058733 RTNIT1_13_C07.g1_A029 Roots minus ni... 217 2e-055
gb|AW065119.1|AW065119 ST39H05 Pine TriplEx shoot tip libra... 216 3e-055
gb|CF397272.1|CF397272 RTDS3_2_C01.g1_A022 Drought-stressed... 216 3e-055
gb|DR167401.1|DR167401 RTPHOS1_18_C09.g1_A029 Roots minus p... 216 3e-055
gb|DR685654.1|DR685654 EST1075731 Normalized pine embryo li... 216 3e-055
gb|DR694473.1|DR694473 EST1084565 Normalized pine embryo li... 216 3e-055
gb|DT638742.1|DT638742 EST1153673 Normalized pine embryo li... 216 3e-055
gb|DR161238.1|DR161238 RTFE1_10_D10.g1_A029 Roots minus iro... 216 4e-055
gb|DR744198.1|DR744198 RTCU1_20_G08.g1_A029 Roots plus adde... 216 4e-055
gb|CF667292.1|CF667292 RTCNT1_29_G02.b1_A029 Root control P... 215 6e-055
gb|DR111301.1|DR111301 RTS1_16_F03.g1_A029 Roots minus sulf... 215 6e-055
gb|DR111427.1|DR111427 RTS1_17_F02.g1_A029 Roots minus sulf... 215 6e-055
gb|DR011035.1|DR011035 HEAT1_3_A03.b1_A029 Root at 37 C for... 215 8e-055
gb|DR020720.1|DR020720 STRS1_38_G12.g1_A034 Shoot tip pitch... 215 8e-055
gb|CF387084.1|CF387084 RTDR1_10_E10.g1_A015 Loblolly pine r... 215 1e-054
gb|CF399612.1|CF399612 RTDS3_26_H01.g1_A022 Drought-stresse... 215 1e-054
gb|BQ701670.1|BQ701670 NXSI_118_C02_F NXSI (Nsf Xylem Side ... 214 1e-054
gb|CF388652.1|CF388652 RTDR2_4_A10.g1_A021 Loblolly pine ro... 214 1e-054
gb|CV034082.1|CV034082 RTNACL1_38_B11.g1_A029 Roots plus ad... 214 1e-054
gb|DR014768.1|DR014768 HEAT1_51_B07.g1_A029 Root at 37 C fo... 214 1e-054
gb|DR117116.1|DR117116 RTMG1_4_G10.g1_A029 Roots minus magn... 214 1e-054
gb|DR384384.1|DR384384 RTHG1_1_H06.g1_A029 Roots plus added... 214 1e-054
gb|DR384689.1|DR384689 RTHG1_3_H06.g1_A029 Roots plus added... 214 1e-054
gb|DR387764.1|DR387764 RTHG1_24_A11.b1_A029 Roots plus adde... 214 1e-054
gb|DR387774.1|DR387774 RTHG1_24_B11.b1_A029 Roots plus adde... 214 1e-054
gb|DR098778.1|DR098778 STRR1_47_G01.g1_A033 Stem Response R... 214 2e-054
gb|DR071883.1|DR071883 RTDK1_22_E02.g1_A029 Roots, dark Pin... 213 3e-054
gb|AY356372.1| Pinus taeda R2R3-MYB transcription factor (M... 213 3e-054
gb|DR168212.1|DR168212 RTPHOS1_23_H12.g1_A029 Roots minus p... 212 7e-054
gb|DR164052.1|DR164052 RTFE1_46_B11.g1_A029 Roots minus iro... 211 1e-053
gb|DR099337.1|DR099337 STRR1_54_G08.g1_A033 Stem Response R... 210 2e-053
gb|CF667045.1|CF667045 RTCNT1_27_G11.g1_A029 Root control P... 210 3e-053
gb|CF669490.1|CF669490 RTCNT1_44_A10.b1_A029 Root control P... 210 3e-053
gb|AW065064.1|AW065064 ST39B10 Pine TriplEx shoot tip libra... 208 1e-052
gb|CF401736.1|CF401736 RTWW1_14_C05.g1_A015 Well-watered lo... 207 2e-052
gb|DR178268.1|DR178268 RTMNUT1_10_C01.g1_A029 Roots minus m... 206 3e-052
gb|AW064634.1|AW064634 ST33H05 Pine TriplEx shoot tip libra... 205 8e-052
gb|DR081462.1|DR081462 RTFEPL1_29_G04.g1_A029 Roots plus ad... 204 1e-051
gb|CO162972.1|CO162972 FLD1_38_D09.g1_A029 Root flooded Pin... 200 2e-051
gb|BX679906.1|BX679906 BX679906 RS Pinus pinaster cDNA clon... 201 4e-051
gb|CO176256.1|CO176256 NDL1_60_G12.g1_A029 Needles control ... 202 6e-051
gb|CO365658.1|CO365658 RTK1_18_A01.g1_A029 Roots minus pota... 202 6e-051
gb|CO366297.1|CO366297 RTK1_27_B09.b1_A029 Roots minus pota... 202 8e-051
gb|DR014691.1|DR014691 HEAT1_51_B07.b1_A029 Root at 37 C fo... 201 1e-050
gb|DR017658.1|DR017658 STRS1_17_E03.g1_A034 Shoot tip pitch... 201 1e-050
gb|DR051127.1|DR051127 RTBOR1_27_G08.g1_A029 Roots plus add... 198 1e-050
gb|CO198121.1|CO198121 GEO1_11_A02.g1_A029 Root gravitropis... 201 1e-050
gb|CO361397.1|CO361397 NDL2_4_D03.g1_A029 Needles control 2... 201 1e-050
gb|BX680288.1|BX680288 BX680288 RS Pinus pinaster cDNA clon... 196 2e-050
gb|CO361315.1|CO361315 NDL2_4_D03.b1_A029 Needles control 2... 200 3e-050
gb|DR059561.1|DR059561 RTNIT1_18_A02.g1_A029 Roots minus ni... 199 4e-050
gb|DR050898.1|DR050898 RTBOR1_26_H05.b1_A029 Roots plus add... 198 1e-049
gb|DR079932.1|DR079932 RTFEPL1_18_F11.g1_A029 Roots plus ad... 198 1e-049
gb|DR111240.1|DR111240 RTS1_16_G05.b1_A029 Roots minus sulf... 197 2e-049
gb|CX648418.1|CX648418 COLD1_28_B12.g1_A029 Root cold Pinus... 191 3e-049
gb|CF475091.1|CF475091 RTWW2_5_F10.g1_A021 Well-watered lob... 163 3e-049
gb|BQ290999.1|BQ290999 NXRV054_D07_F NXRV (Nsf Xylem Root w... 196 5e-049
gb|CV034623.1|CV034623 RTNACL1_10_A11.g1_A029 Roots plus ad... 196 5e-049
gb|DR014928.1|DR014928 HEAT1_52_A11.g1_A029 Root at 37 C fo... 195 7e-049
gb|DR167765.1|DR167765 RTPHOS1_20_H05.g1_A029 Roots minus p... 194 1e-048
gb|DR015700.1|DR015700 STRS1_5_D02.b1_A034 Shoot tip pitch ... 192 6e-048
gb|DR015783.1|DR015783 STRS1_5_D02.g1_A034 Shoot tip pitch ... 192 6e-048
gb|CO368386.1|CO368386 RTK1_40_G08.b1_A029 Roots minus pota... 192 8e-048
gb|DR057958.1|DR057958 RTNIT1_8_G05.g1_A029 Roots minus nit... 192 8e-048
gb|CF395899.1|CF395899 RTDS2_19_G06.g1_A021 Drought-stresse... 191 1e-047
gb|CO163969.1|CO163969 FLD1_45_A11.b1_A029 Root flooded Pin... 191 1e-047
gb|BQ634727.1|BQ634727 NXRV072_E09_F NXRV (Nsf Xylem Root w... 191 2e-047
gb|CO362169.1|CO362169 RTK1_1_F07.g1_A029 Roots minus potas... 188 8e-047
gb|CX646616.1|CX646616 COLD1_10_A05.g1_A029 Root cold Pinus... 188 8e-047
gb|BX678005.1|BX678005 BX678005 RN Pinus pinaster cDNA clon... 178 2e-046
gb|DT633531.1|DT633531 EST1148462 Normalized pine embryo li... 146 3e-046
gb|DR686108.1|DR686108 EST1076186 Normalized pine embryo li... 146 3e-046
gb|DR744906.1|DR744906 RTCU1_25_E06.g1_A029 Roots plus adde... 146 3e-046
gb|CF402623.1|CF402623 RTWW1_21_B11.g1_A015 Well-watered lo... 186 5e-046
gb|CO368639.1|CO368639 RTK1_41_H02.g1_A029 Roots minus pota... 145 7e-046
gb|CX647457.1|CX647457 COLD1_16_B04.g1_A029 Root cold Pinus... 185 1e-045
gb|CF389081.1|CF389081 RTDR2_13_A10.g1_A021 Loblolly pine r... 183 3e-045
gb|DR163874.1|DR163874 RTFE1_45_A12.g1_A029 Roots minus iro... 182 5e-045
gb|CF397637.1|CF397637 RTDS3_4_A07.g1_A022 Drought-stressed... 182 7e-045
gb|CF470618.1|CF470618 RTDS1_13_H10.g1_A015 Drought-stresse... 182 7e-045
gb|CF396041.1|CF396041 RTDS2_20_C12.g1_A021 Drought-stresse... 181 2e-044
gb|DR683171.1|DR683171 EST1073247 Normalized pine embryo li... 181 2e-044
gb|DR683172.1|DR683172 EST1073248 Normalized pine embryo li... 181 2e-044
gb|DT631296.1|DT631296 EST1146227 Normalized pine embryo li... 181 2e-044
gb|CF391868.1|CF391868 RTDR3_10_B04.g1_A022 Loblolly pine r... 180 3e-044
gb|DR069928.1|DR069928 RTDK1_10_F06.b1_A029 Roots, dark Pin... 180 3e-044
gb|DR072123.1|DR072123 RTDK1_24_F01.b1_A029 Roots, dark Pin... 180 3e-044
gb|DR094442.1|DR094442 STRR1_14_D03.g1_A033 Stem Response R... 180 3e-044
gb|CO201585.1|CO201585 RTCNT2_6_F07.g1_A029 Root control 2 ... 178 1e-043
gb|DR386238.1|DR386238 RTHG1_13_G03.g1_A029 Roots plus adde... 177 2e-043
gb|DR015810.1|DR015810 STRS1_5_F07.g1_A034 Shoot tip pitch ... 143 2e-043
gb|DR055413.1|DR055413 RTCA1_23_C03.g2_A029 Roots minus cal... 144 2e-043
gb|BF609979.1|BF609979 NXSI_053_C11_F NXSI (Nsf Xylem Side ... 177 3e-043
gb|CX651169.1|CX651169 COLD1_50_D03.g1_A029 Root cold Pinus... 176 6e-043
gb|CF400460.1|CF400460 RTWW1_5_H12.g1_A015 Well-watered lob... 175 8e-043
gb|DR117421.1|DR117421 RTMG1_6_G12.g1_A029 Roots minus magn... 175 8e-043
gb|DT632905.1|DT632905 EST1147836 Normalized pine embryo li... 174 1e-042
gb|CN852309.1|CN852309 Pi148-1 Salicylate-treated slash pin... 174 2e-042
gb|DR683147.1|DR683147 EST1073223 Normalized pine embryo li... 174 2e-042
gb|DT631233.1|DT631233 EST1146164 Normalized pine embryo li... 174 2e-042
gb|BX784172.1|BX784172 BX784172 Pinus pinaster differenciat... 172 5e-042
gb|DT633408.1|DT633408 EST1148339 Normalized pine embryo li... 135 2e-041
gb|DR686505.1|DR686505 EST1076583 Normalized pine embryo li... 135 2e-041
gb|AY356371.1| Pinus taeda R2R3-MYB transcription factor (M... 170 3e-041
gb|DR052727.1|DR052727 RTCA1_6_B03.g1_A029 Roots minus calc... 169 7e-041
gb|CO162411.1|CO162411 FLD1_35_D02.b1_A029 Root flooded Pin... 167 2e-040
gb|BE520012.1|BE520012 NXCI_028_B03_F NXCI (Nsf Xylem Compr... 167 2e-040
gb|DR694707.1|DR694707 EST1084799 Normalized pine embryo li... 166 3e-040
gb|DT638995.1|DT638995 EST1153926 Normalized pine embryo li... 166 3e-040
gb|CF396247.1|CF396247 RTDS2_15_B11.g1_A021 Drought-stresse... 116 7e-040
gb|CO170303.1|CO170303 NDL1_13_D05.b1_A029 Needles control ... 163 3e-039
gb|DR111182.1|DR111182 RTS1_16_A02.b1_A029 Roots minus sulf... 163 4e-039
gb|CF385274.1|CF385274 RTDR1_2_D01.g1_A015 Loblolly pine ro... 162 6e-039
gb|CF393224.1|CF393224 RTDR3_17_B01.g1_A022 Loblolly pine r... 161 1e-038
gb|CF663690.1|CF663690 RTCNT1_4_C02.g1_A029 Root control Pi... 160 3e-038
gb|CV033497.1|CV033497 RTNACL1_34_H05.g1_A029 Roots plus ad... 159 5e-038
gb|DR089238.1|DR089238 RTAL1_7_A05.g1_A029 Roots plus added... 159 5e-038
gb|DR384837.1|DR384837 RTHG1_4_H08.g1_A029 Roots plus added... 159 5e-038
gb|CO361388.1|CO361388 NDL2_4_C06.g1_A029 Needles control 2... 143 1e-037
gb|DR179654.1|DR179654 RTMNUT1_23_B05.g2_A029 Roots minus m... 145 1e-037
gb|CV034962.1|CV034962 RTNACL1_12_F05.g1_A029 Roots plus ad... 157 2e-037
gb|CX714163.1|CX714163 RTPQ1_18_D03.g1_A032 Roots treated w... 157 2e-037
gb|DR101609.1|DR101609 STRR1_74_C02.g1_A033 Stem Response R... 146 7e-037
gb|CF401126.1|CF401126 RTWW1_10_H02.b1_A015 Well-watered lo... 150 3e-035
gb|CO172303.1|CO172303 NDL1_28_G10.g1_A029 Needles control ... 149 6e-035
gb|CV035967.1|CV035967 RTNACL1_43_E10.g1_A029 Roots plus ad... 149 6e-035
gb|CO173249.1|CO173249 NDL1_35_A08.b1_A029 Needles control ... 145 7e-034
gb|CF672338.1|CF672338 RTCNT1_62_H04.g1_A029 Root control P... 87 1e-033
gb|CO173370.1|CO173370 NDL1_35_F03.g1_A029 Needles control ... 143 5e-033
gb|CO164542.1|CO164542 FLD1_48_E08.g1_A029 Root flooded Pin... 142 7e-033
gb|CO362724.1|CO362724 RTK1_5_A02.g1_A029 Roots minus potas... 119 2e-032
gb|CF396536.1|CF396536 RTDS2_22_H07.g1_A021 Drought-stresse... 138 1e-031
gb|DR746217.1|DR746217 RTCU1_35_B06.g1_A029 Roots plus adde... 137 2e-031
gb|BG319376.1|BG319376 NXPV_027_C05_F NXPV (Nsf Xylem Plani... 137 3e-031
gb|DR020641.1|DR020641 STRS1_38_G12.b1_A034 Shoot tip pitch... 137 3e-031
gb|CO173319.1|CO173319 NDL1_35_A08.g1_A029 Needles control ... 131 2e-029
gb|DR101544.1|DR101544 STRR1_74_C02.b1_A033 Stem Response R... 129 5e-029
gb|DR167893.1|DR167893 RTPHOS1_21_G02.g1_A029 Roots minus p... 125 1e-027
gb|CF390133.1|CF390133 RTDR2_12_C07.g1_A021 Loblolly pine r... 87 1e-027
gb|DR079868.1|DR079868 RTFEPL1_18_F11.b1_A029 Roots plus ad... 124 2e-027
gb|CF392063.1|CF392063 RTDR3_12_C02.g1_A022 Loblolly pine r... 90 3e-027
gb|DR096412.1|DR096412 STRR1_27_G02.g1_A033 Stem Response R... 123 4e-027
gb|DR167833.1|DR167833 RTPHOS1_21_A06.g1_A029 Roots minus p... 122 8e-027
gb|DR100867.1|DR100867 STRR1_68_H01.g1_A033 Stem Response R... 119 5e-026
gb|BX250447.1|BX250447 BX250447 Pinus pinaster differenciat... 114 2e-024
gb|DR690028.1|DR690028 EST1080114 Normalized pine embryo li... 96 3e-024
gb|DT635793.1|DT635793 EST1150724 Normalized pine embryo li... 96 3e-024
gb|DR050127.1|DR050127 RTBOR1_21_A09.g1_A029 Roots plus add... 99 6e-024
gb|DR013838.1|DR013838 HEAT1_21_G09.g1_A029 Root at 37 C fo... 99 6e-024
gb|DR024798.1|DR024798 STRS1_67_B12.g1_A034 Shoot tip pitch... 99 6e-024
gb|DR089099.1|DR089099 RTAL1_6_B11.g1_A029 Roots plus added... 99 6e-024
gb|CO364221.1|CO364221 RTK1_14_A05.g1_A029 Roots minus pota... 99 6e-024
gb|CV139163.1|CV139163 EST850372 Sequencing ESTs from loblo... 99 6e-024
gb|DR024941.1|DR024941 STRS1_68_B11.g1_A034 Shoot tip pitch... 99 6e-024
gb|DT626587.1|DT626587 EST1158511 Sequencing ESTs from lobl... 99 6e-024
gb|CF669684.1|CF669684 RTCNT1_45_A07.g1_A029 Root control P... 99 6e-024
gb|CF386912.1|CF386912 RTDR1_9_D07.g1_A015 Loblolly pine ro... 99 6e-024
gb|DR109956.1|DR109956 RTS1_1_B02.b1_A029 Roots minus sulfu... 109 8e-023
gb|CV033833.1|CV033833 RTNACL1_36_H06.g1_A029 Roots plus ad... 108 1e-022
gb|DR112102.1|DR112102 RTS1_25_H07.g1_A029 Roots minus sulf... 108 1e-022
gb|BQ654804.1|BQ654804 NXRV085_H06_F NXRV (Nsf Xylem Root w... 105 7e-022
gb|CF665728.1|CF665728 RTCNT1_18_C05.b1_A029 Root control P... 104 2e-021
gb|DN448288.1|DN448288 EST944087 Sequencing ESTs from loblo... 90 3e-021
gb|DT625580.1|DT625580 EST1157504 Sequencing ESTs from lobl... 90 3e-021
gb|CN783759.1|CN783759 EST782450 Sequencing ESTs from loblo... 90 3e-021
gb|CV138259.1|CV138259 EST849468 Sequencing ESTs from loblo... 90 3e-021
gb|DT624539.1|DT624539 EST1158826 Sequencing ESTs from lobl... 90 3e-021
gb|DN458982.1|DN458982 EST954781 Sequencing ESTs from loblo... 95 4e-021
gb|CN783895.1|CN783895 EST782586 Sequencing ESTs from loblo... 95 4e-021
gb|DN464734.1|DN464734 EST960533 Sequencing ESTs from loblo... 95 4e-021
gb|DN455288.1|DN455288 EST951087 Sequencing ESTs from loblo... 95 4e-021
gb|CV135175.1|CV135175 EST846384 Sequencing ESTs from loblo... 95 4e-021
gb|DN463709.1|DN463709 EST959508 Sequencing ESTs from loblo... 95 4e-021
gb|DT626735.1|DT626735 EST1159811 Sequencing ESTs from lobl... 95 4e-021
gb|CO412408.1|CO412408 EST842793 Sequencing ESTs from loblo... 95 4e-021
gb|DN452317.1|DN452317 EST948116 Sequencing ESTs from loblo... 95 4e-021
gb|CV136199.1|CV136199 EST847408 Sequencing ESTs from loblo... 95 4e-021
gb|DN447482.1|DN447482 EST943281 Sequencing ESTs from loblo... 95 4e-021
gb|DN456471.1|DN456471 EST952270 Sequencing ESTs from loblo... 95 4e-021
gb|CO411548.1|CO411548 EST841933 Sequencing ESTs from loblo... 95 4e-021
gb|CO414624.1|CO414624 EST845009 Sequencing ESTs from loblo... 95 4e-021
gb|DR120088.1|DR120088 RTMG1_27_A10.g2_A029 Roots minus mag... 103 5e-021
gb|DR059765.1|DR059765 RTNIT1_19_D08.g1_A029 Roots minus ni... 101 7e-021
>gb|CF667523.1|CF667523 RTCNT1_30_H07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_30_H07_A029 5', mRNA sequence
Length = 667
Score = 226 bits (489), Expect = 3e-058
Identities = 84/119 (70%), Positives = 99/119 (83%)
Frame = +2 / +1
Query: 311 RRAMGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRW 490
+ +MGRTPCC KVGL RG WT EED L+NYI HGEG WR+LPK A LLRCGKSCRLRW
Sbjct: 58 QHSMGRTPCCLKVGLNRGPWTPEEDLCLSNYIESHGEGGWRTLPKKARLLRCGKSCRLRW 237
Query: 491 INYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
+NYLR DVK G+I EEED+I++LH LGNRWSLIA +PGRTDNE+KNYWN+HLS+++
Sbjct: 238 MNYLRPDVKHGHILPEEEDLILRLHRLLGNRWSLIAGRMPGRTDNEVKNYWNTHLSKKL 414
Score = 84.0 bits (177), Expect(2) = 7e-022
Identities = 41/65 (63%), Positives = 43/65 (66%)
Frame = -3 / -3
Query: 513 TSARR*LIHRSRQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQH 334
TS RR* I R+ QL PHRSR AFLGS L PSP +M* SSS V PRLSPTF Q
Sbjct: 260 TSGRR*FIQRNLQLFPHRSRRAFLGSVLHPPSP*DSM*FERQRSSSGVQGPRLSPTFRQQ 81
Query: 333 GVLPI 319
GV PI
Sbjct: 80 GVRPI 66
Score = 41.4 bits (84), Expect(2) = 7e-022
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = -3 / -3
Query: 657 LRCEFQ*FLISLSVRPGRWLAIRDHLLPR 571
LR FQ*FL SLSV PG AI+DHL PR
Sbjct: 404 LRWVFQ*FLTSLSVLPGIRPAIKDHLFPR 318
>gb|CF477905.1|CF477905 RTWW3_13_C03.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_13_C03_A022 5', mRNA sequence
Length = 707
Score = 223 bits (482), Expect = 3e-057
Identities = 84/116 (72%), Positives = 97/116 (83%)
Frame = +2 / +3
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR PCC +VGL RG WTA+ED LL YI HGEG W +LP+ AGL RCGKSCRLRW+NY
Sbjct: 87 MGRAPCCSQVGLLRGPWTAKEDNLLTRYIEWHGEGDWSNLPEKAGLGRCGKSCRLRWLNY 266
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR +KRGNIS++EED+II+LH LGNRWSLIA LPGRTDNEIKN+WNSHLS+Q+
Sbjct: 267 LRPTIKRGNISQDEEDLIIRLHRLLGNRWSLIAGRLPGRTDNEIKNHWNSHLSKQL 434
Score = 76.2 bits (160), Expect(2) = 5e-022
Identities = 35/61 (57%), Positives = 38/61 (62%)
Frame = -3 / -2
Query: 501 R*LIHRSRQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLP 322
R*L HRS QL PHR RPAF G LQ PSPC ++ L SS AV P PT+ QHG P
Sbjct: 268 R*LSHRSLQLFPHRPRPAFSGRLLQSPSPCHSIYLVRRLSSLAVQGPLSKPTWEQHGARP 89
Query: 321 I 319
I
Sbjct: 88 I 86
Score = 49.6 bits (102), Expect(2) = 5e-022
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 663 CRLRCEFQ*FLISLSVRPGRWLAIRDHLLPR 571
C LR FQ*F ISLSVRPG AI DHLLPR
Sbjct: 430 CLLR*LFQ*FFISLSVRPGNLPAINDHLLPR 338
>gb|CF671993.1|CF671993 RTCNT1_60_D02.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_60_D02_A029 5', mRNA sequence
Length = 557
Score = 223 bits (482), Expect = 3e-057
Identities = 80/116 (68%), Positives = 99/116 (85%)
Frame = +2 / +2
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR PCC+K+G+K+G WT +ED++L +YI +HG G+WR+LPK AGLLRCGKSCRLRW NY
Sbjct: 20 MGRAPCCDKMGVKKGPWTLDEDKILVDYITKHGHGNWRALPKQAGLLRCGKSCRLRWTNY 199
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
L+ D+KRGN S EEED IIKLH +GNRWS IAS+LPGRTDNEIKN WN+HL +++
Sbjct: 200 LKPDIKRGNFSPEEEDQIIKLHELIGNRWSTIASYLPGRTDNEIKNVWNTHLKKRL 367
>gb|CO361899.1|CO361899 NDL2_7_G04.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_7_G04_A029 5', mRNA sequence
Length = 871
Score = 223 bits (481), Expect = 3e-057
Identities = 81/116 (69%), Positives = 99/116 (85%)
Frame = +2 / +3
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR PCC KVGL +G W+AEED LL YI HGEG+WRSLPK AGL RCGKSCRLRW+NY
Sbjct: 3 MGRAPCCTKVGLNKGAWSAEEDSLLGKYIQTHGEGNWRSLPKKAGLRRCGKSCRLRWLNY 182
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR +KRGNI+ +EE++II++HA LGNRWS+IA +PGRTDNEIKNYWN++LS+++
Sbjct: 183 LRPCIKRGNITTDEEELIIRMHALLGNRWSIIAGRVPGRTDNEIKNYWNTNLSKKL 350
>gb|DR694940.1|DR694940 EST1085033 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEI64 3' end, mRNA sequence
Length = 848
Score = 222 bits (480), Expect = 5e-057
Identities = 80/116 (68%), Positives = 97/116 (83%)
Frame = +2 / +1
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCC K GL RG WT ED +L+ YI HG+G WR++PK AGL RCGKSCRLRW+NY
Sbjct: 94 MGRSPCCSKEGLNRGAWTKREDMILSEYIRIHGDGGWRNMPKRAGLKRCGKSCRLRWLNY 273
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGNIS +EE++II+LH LGNRWSLIA LPGRTDNEIKNYWN+H+S+++
Sbjct: 274 LRPDIKRGNISPDEEELIIRLHHLLGNRWSLIAGRLPGRTDNEIKNYWNTHMSKKL 441
>gb|DT639133.1|DT639133 EST1154064 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHN42 3' end, mRNA sequence
Length = 857
Score = 222 bits (480), Expect = 5e-057
Identities = 80/116 (68%), Positives = 97/116 (83%)
Frame = +2 / +3
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCC K GL RG WT ED +L+ YI HG+G WR++PK AGL RCGKSCRLRW+NY
Sbjct: 102 MGRSPCCSKEGLNRGAWTKREDMILSEYIRIHGDGGWRNMPKRAGLKRCGKSCRLRWLNY 281
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGNIS +EE++II+LH LGNRWSLIA LPGRTDNEIKNYWN+H+S+++
Sbjct: 282 LRPDIKRGNISPDEEELIIRLHHLLGNRWSLIAGRLPGRTDNEIKNYWNTHMSKKL 449
>gb|DR110104.1|DR110104 RTS1_8_C03.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_8_C03_A029 5', mRNA sequence
Length = 538
Score = 222 bits (479), Expect = 7e-057
Identities = 80/119 (67%), Positives = 100/119 (84%)
Frame = +2 / +2
Query: 305 ASRRAMGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRL 484
+++ MGR PCC KVGL +G W+AEED LL YI HGEG+WRSLPK AGL RCGKSCRL
Sbjct: 182 SNKAEMGRAPCCTKVGLNKGAWSAEEDSLLGKYIQTHGEGNWRSLPKKAGLRRCGKSCRL 361
Query: 485 RWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSR 661
RW+NYLR +KRGNI+ +EE++II++HA LGNRWS+IA +PGRTDNE+KNYWN++LS+
Sbjct: 362 RWLNYLRPCIKRGNITTDEEELIIRMHALLGNRWSIIAGRVPGRTDNEVKNYWNTNLSK 538
>gb|AW011253.1|AW011253 ST18F02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST18F02, mRNA sequence
Length = 578
Score = 221 bits (478), Expect = 9e-057
Identities = 83/116 (71%), Positives = 96/116 (82%)
Frame = +2 / +2
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR PCCEK +G W+ +ED+ L YI HGEGSWRSLPK AGL RCGKSCRLRWINY
Sbjct: 17 MGRAPCCEKTHTNKGAWSKDEDEALVAYIQAHGEGSWRSLPKAAGLQRCGKSCRLRWINY 196
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S EE++IIIKLH+ LGN+WSLIAS LPGRTDNEIKNYWN+H+ R++
Sbjct: 197 LRPDLKRGNFSPEEDEIIIKLHSMLGNKWSLIASKLPGRTDNEIKNYWNTHIKRKM 364
>gb|CF391376.1|CF391376 RTDR3_1_G04.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_1_G04_A022 5', mRNA
sequence
Length = 480
Score = 221 bits (477), Expect = 1e-056
Identities = 83/119 (69%), Positives = 95/119 (79%)
Frame = +2 / +3
Query: 311 RRAMGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRW 490
R MGR PCCEKVGLK+G WT EEDQ L YI EHG GSWR+LP+ AGLLRCGKSCRLRW
Sbjct: 90 REIMGRAPCCEKVGLKKGPWTPEEDQKLLAYIQEHGHGSWRALPQKAGLLRCGKSCRLRW 269
Query: 491 INYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
NYLR D+KRG + +EE II+LHA LGNRWS I + LP RTDNEIKNYWN+HL +++
Sbjct: 270 TNYLRPDIKRGKFNPQEEQTIIQLHALLGNRWSTITTQLPKRTDNEIKNYWNTHLKKRL 446
>gb|CO200901.1|CO200901 RTCNT2_2_G06.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_2_G06_A029 3', mRNA sequence
Length = 863
Score = 221 bits (476), Expect = 2e-056
Identities = 83/124 (66%), Positives = 98/124 (79%)
Frame = +2 / -3
Query: 296 LPGASRRAMGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKS 475
LP S MGR+PCCEK +G WT EED L +I HGEG WRSLP AGLLRCGKS
Sbjct: 849 LPNLSLCQMGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPTAAGLLRCGKS 670
Query: 476 CRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHL 655
CRLRWINYLR D+KRGN S EE+++II+LH+ +GN+WSLIA+ LPGRTDNEIKNYWNSH+
Sbjct: 669 CRLRWINYLRPDIKRGNFSSEEDELIIQLHSLIGNKWSLIAAKLPGRTDNEIKNYWNSHI 490
Query: 656 SRQI 667
R++
Sbjct: 489 KRKL 478
Score = 75.8 bits (159), Expect(2) = 4e-022
Identities = 37/67 (55%), Positives = 41/67 (61%)
Frame = -3 / +2
Query: 510 SARR*LIHRSRQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHG 331
S R+* IHRS QL PHRS PA +GS+ Q PSP + M* SSS VH P FSQ G
Sbjct: 635 SGRK*FIHRSLQLFPHRSSPAAVGSERQQPSPWARM*AMRRSSSSLVHAPLFV*AFSQQG 814
Query: 330 VLPIARR 310
LPI R
Sbjct: 815 DLPI*HR 835
Score = 50.6 bits (104), Expect(2) = 4e-022
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = -3 / +2
Query: 657 LRCEFQ*FLISLSVRPGRWLAIRDHLLP 574
L EFQ*FLISLSVRPG + AIRDHL P
Sbjct: 488 LMWEFQ*FLISLSVRPGNFAAIRDHLFP 571
>gb|CF388213.1|CF388213 RTDR2_1_B07.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_1_B07_A021 5', mRNA
sequence
Length = 712
Score = 220 bits (474), Expect = 3e-056
Identities = 81/116 (69%), Positives = 96/116 (82%)
Frame = +2 / +3
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCCEK +G WT EED L +I HGEG WRSLPK AGL+RCGKSCRLRWINY
Sbjct: 54 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINY 233
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S+EE+++IIKLH+ LGN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 234 LRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 401
Score = 107 bits (228), Expect = 3e-022
Identities = 56/109 (51%), Positives = 57/109 (52%)
Frame = -3 / -1
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ*F ISLSVRPG AIRDHLLP W S RR* IHRS QL P
Sbjct: 379 FQ*FFISLSVRPGNLPAIRDHLLPSREWSLMMSSSSSSEKFPRFRSGRR*FIHRSLQLFP 200
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPI 319
R PA LGS+ Q PSP M SSS VH P FSQ G LPI
Sbjct: 199 QRISPAALGSERQQPSP*VRMWAMRRSSSSLVHAPLFV*AFSQQGDLPI 53
>gb|CX650454.1|CX650454 COLD1_45_F10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_45_F10_A029 5', mRNA sequence
Length = 826
Score = 220 bits (474), Expect = 3e-056
Identities = 81/116 (69%), Positives = 96/116 (82%)
Frame = +2 / +1
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCCEK +G WT EED L +I HGEG WRSLPK AGL+RCGKSCRLRWINY
Sbjct: 43 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINY 222
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S+EE+++IIKLH+ LGN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 223 LRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 390
Score = 107 bits (228), Expect = 3e-022
Identities = 56/109 (51%), Positives = 57/109 (52%)
Frame = -3 / -3
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ*F ISLSVRPG AIRDHLLP W S RR* IHRS QL P
Sbjct: 368 FQ*FFISLSVRPGNLPAIRDHLLPSREWSLMMSSSSSSEKFPRFRSGRR*FIHRSLQLFP 189
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPI 319
R PA LGS+ Q PSP M SSS VH P FSQ G LPI
Sbjct: 188 QRISPAALGSERQQPSP*VRMWAMRRSSSSLVHAPLFV*AFSQQGDLPI 42
>gb|DR023090.1|DR023090 STRS1_55_A05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_55_A05_A034 5', mRNA sequence
Length = 752
Score = 220 bits (474), Expect = 3e-056
Identities = 84/121 (69%), Positives = 94/121 (77%)
Frame = +2 / +3
Query: 305 ASRRAMGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRL 484
AS MGR PCC +G WT EED L YI HGEG WRSLPK AGLLRCGKSCRL
Sbjct: 6 ASLLTMGRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRL 185
Query: 485 RWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQ 664
RWINYLR D+KRG S++E+D+I+KLHA LGN+WSLIA LPGRTDNEIKNYWNSHL R+
Sbjct: 186 RWINYLRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRK 365
Query: 665 I 667
+
Sbjct: 366 L 368
Score = 109 bits (233), Expect = 6e-023
Identities = 60/117 (51%), Positives = 65/117 (55%)
Frame = -3 / -2
Query: 654 RCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQ 475
R EFQ*FLISLSVRPG+ AIRDHL PR A S RR* IH S Q
Sbjct: 355 R*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEKPPRFRSGRR*FIHLSLQ 176
Query: 474 LLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPIARRLA 304
L PHRSRPA LG + Q PSP + + S SSS V P L +Q G LPI R A
Sbjct: 175 LFPHRSRPAALGRERQHPSP*A*IYWVSLSSSSLVQAPLLLSPLAQQGALPIVSREA 5
>gb|DR024153.1|DR024153 STRS1_62_E05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_62_E05_A034 5', mRNA sequence
Length = 791
Score = 220 bits (474), Expect = 3e-056
Identities = 81/116 (69%), Positives = 96/116 (82%)
Frame = +2 / +2
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCCEK +G WT EED L +I HGEG WRSLPK AGL+RCGKSCRLRWINY
Sbjct: 38 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINY 217
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S+EE+++IIKLH+ LGN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 218 LRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 385
Score = 107 bits (228), Expect = 3e-022
Identities = 56/109 (51%), Positives = 57/109 (52%)
Frame = -3 / -3
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ*F ISLSVRPG AIRDHLLP W S RR* IHRS QL P
Sbjct: 363 FQ*FFISLSVRPGNLPAIRDHLLPSREWSLMMSSSSSSEKFPRFRSGRR*FIHRSLQLFP 184
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPI 319
R PA LGS+ Q PSP M SSS VH P FSQ G LPI
Sbjct: 183 QRISPAALGSERQQPSP*VRMWAMRRSSSSLVHAPLFV*AFSQQGDLPI 37
>gb|DR161451.1|DR161451 RTFE1_11_H03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_11_H03_A029 5', mRNA sequence
Length = 669
Score = 220 bits (474), Expect = 3e-056
Identities = 84/121 (69%), Positives = 94/121 (77%)
Frame = +2 / +3
Query: 305 ASRRAMGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRL 484
AS MGR PCC +G WT EED L YI HGEG WRSLPK AGLLRCGKSCRL
Sbjct: 6 ASLLTMGRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRL 185
Query: 485 RWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQ 664
RWINYLR D+KRG S++E+D+I+KLHA LGN+WSLIA LPGRTDNEIKNYWNSHL R+
Sbjct: 186 RWINYLRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRK 365
Query: 665 I 667
+
Sbjct: 366 L 368
Score = 108 bits (230), Expect = 1e-022
Identities = 59/117 (50%), Positives = 65/117 (55%)
Frame = -3 / -3
Query: 654 RCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQ 475
R EFQ*FLISLSVRPG+ AIRDHL PR A S RR* IH S Q
Sbjct: 355 R*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEKPPRFRSGRR*FIHLSLQ 176
Query: 474 LLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPIARRLA 304
L PHRSRPA LG + Q PSP + + S SSS V P L +Q G LPI + A
Sbjct: 175 LFPHRSRPAALGRERQHPSP*A*IYWVSLSSSSLVQAPLLLSPLAQQGALPIVSKEA 5
>gb|DR060728.1|DR060728 RTNIT1_29_D06.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_29_D06_A029 5', mRNA sequence
Length = 726
Score = 219 bits (473), Expect = 4e-056
Identities = 81/116 (69%), Positives = 96/116 (82%)
Frame = +2 / +2
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCCEK +G WT EED L +I HGEG WRSLPK AGL+RCGKSCRLRWINY
Sbjct: 26 MGRSPCCEKAHTNKGGWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINY 205
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S+EE+++IIKLH+ LGN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 206 LRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 373
Score = 106 bits (226), Expect = 5e-022
Identities = 56/109 (51%), Positives = 57/109 (52%)
Frame = -3 / -1
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ*F ISLSVRPG AIRDHLLP W S RR* IHRS QL P
Sbjct: 351 FQ*FFISLSVRPGNLPAIRDHLLPSREWSLMMSSSSSSEKFPRFRSGRR*FIHRSLQLFP 172
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPI 319
R PA LGS+ Q PSP M SSS VH P FSQ G LPI
Sbjct: 171 QRISPAALGSERQQPSP*VRMWAMRRSSSSLVHPPLFV*AFSQQGDLPI 25
>gb|DR161095.1|DR161095 RTFE1_9_G03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_9_G03_A029 5', mRNA sequence
Length = 760
Score = 219 bits (473), Expect = 4e-056
Identities = 81/116 (69%), Positives = 96/116 (82%)
Frame = +2 / +2
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCCEK +G WT EED L +I HGEG WRSLPK AGLLRCGKSCRLRWINY
Sbjct: 50 MGRSPCCEKAHTNKGAWTKEEDDHLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 229
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S EE+++II+LH+ +GN+WSLIA+ LPGRTDNEIKNYWNSH+ R++
Sbjct: 230 LRPDIKRGNFSSEEDELIIQLHSLIGNKWSLIAAKLPGRTDNEIKNYWNSHIKRKL 397
Score = 74.8 bits (157), Expect(2) = 2e-022
Identities = 37/64 (57%), Positives = 40/64 (62%)
Frame = -3 / -2
Query: 510 SARR*LIHRSRQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHG 331
S R+* IHRS QL PHRS PA LGS+ Q PSP + M* SSS VH P FSQ G
Sbjct: 240 SGRK*FIHRSLQLFPHRSSPAALGSERQQPSPWARM*AMRWSSSSLVHAPLFV*AFSQQG 61
Query: 330 VLPI 319
LPI
Sbjct: 60 DLPI 49
Score = 52.4 bits (108), Expect(2) = 2e-022
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = -3 / -2
Query: 657 LRCEFQ*FLISLSVRPGRWLAIRDHLLP 574
L EFQ*FLISLSVRPG + AIRDHLLP
Sbjct: 387 LMWEFQ*FLISLSVRPGNFAAIRDHLLP 304
>gb|BF517838.1|BF517838 NXSI_027_G09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_027_G09 5' similar to Arabidopsis thaliana
sequence At4g38620 putative transcription factor (MYB4)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 494
Score = 219 bits (472), Expect = 6e-056
Identities = 81/116 (69%), Positives = 96/116 (82%)
Frame = +2 / +3
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCCEK +G WT EED L +I HGEG WRSLPK AGL+RCGKSCRLRWINY
Sbjct: 93 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINY 272
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S+EE+++IIKLH+ LGN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 273 LRPDLKRGNXSEEEDELIIKLHSLLGNKWSLIAXXLPGRTDNEIKNYWNTHIKRKL 440
Score = 108 bits (230), Expect = 1e-022
Identities = 57/109 (52%), Positives = 58/109 (53%)
Frame = -3 / -2
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ*F ISLSVRPG AIRDHLLP W S RR* IHRS QL P
Sbjct: 418 FQ*FFISLSVRPGNXXAIRDHLLPSREWSLMMSSSSSSEXFPRFRSGRR*FIHRSLQLFP 239
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPI 319
R PA LGS+ Q PSP M SSS VH P FSQ G LPI
Sbjct: 238 QRISPAALGSERQQPSP*VRMWAMRRSSSSLVHAPLFV*AFSQQGDLPI 92
>gb|CF668816.1|CF668816 RTCNT1_38_G11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_38_G11_A029 5', mRNA sequence
Length = 814
Score = 219 bits (472), Expect = 6e-056
Identities = 79/116 (68%), Positives = 95/116 (81%)
Frame = +2 / +2
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCC K GL RG WT ED +L+ Y+ HG+G WR+LP+ AGL RCGKSCRLRW+NY
Sbjct: 5 MGRSPCCSKEGLNRGAWTKREDMILSEYVRIHGDGGWRNLPEKAGLKRCGKSCRLRWLNY 184
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGNI EE++II+LH LGNRWSLIA LPGRTDNEIKNYWN+HLS+++
Sbjct: 185 LRPDIKRGNICPAEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKL 352
>gb|CO158547.1|CO158547 FLD1_7_D03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_7_D03_A029 5', mRNA sequence
Length = 693
Score = 218 bits (471), Expect = 8e-056
Identities = 79/121 (65%), Positives = 99/121 (81%)
Frame = +2 / +3
Query: 332 PCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRAD 511
PCC+K+G+K+G WT +ED++L +YI +HG G+WR+LPK AGLLRCGKSCRLRW NYLR D
Sbjct: 54 PCCDKMGVKKGAWTLDEDKILVDYITKHGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPD 233
Query: 512 VKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTYRRKYT 691
+KRGN S EEED IIKLH +GNRWS IAS+LPGRTDNEIKN WN+HL +++ + +
Sbjct: 234 IKRGNFSPEEEDQIIKLHELIGNRWSTIASYLPGRTDNEIKNVWNTHLKKRLARMKAELV 413
Query: 692 A 694
A
Sbjct: 414 A 416
>gb|CF393225.1|CF393225 RTDR3_17_D12.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_17_D12_A022 5', mRNA
sequence
Length = 659
Score = 218 bits (470), Expect = 1e-055
Identities = 82/116 (70%), Positives = 92/116 (79%)
Frame = +2 / +1
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR PCC +G WT EED L YI HGEG WRSLPK AGLLRCGKSCRLRWINY
Sbjct: 43 MGRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 222
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRG S++E+D+I+KLHA LGN+WSLIA LPGRTDNEIKNYWNSHL R++
Sbjct: 223 LRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKL 390
Score = 107 bits (228), Expect = 3e-022
Identities = 58/112 (51%), Positives = 63/112 (56%)
Frame = -3 / -1
Query: 654 RCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQ 475
R EFQ*FLISLSVRPG+ AIRDHL PR A S RR* IH S Q
Sbjct: 377 R*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEKPPRFRSGRR*FIHLSLQ 198
Query: 474 LLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPI 319
L PHRSRPA LG + Q PSP + + S SSS V P L +Q G LPI
Sbjct: 197 LFPHRSRPAALGRERQHPSP*A*IYWVSLSSSSLVQAPLLLSPLAQQGALPI 42
>gb|CF472757.1|CF472757 RTDS1_11_D09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_11_D09_A015 5', mRNA sequence
Length = 667
Score = 218 bits (470), Expect = 1e-055
Identities = 82/116 (70%), Positives = 92/116 (79%)
Frame = +2 / +2
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR PCC +G WT EED L YI HGEG WRSLPK AGLLRCGKSCRLRWINY
Sbjct: 14 MGRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 193
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRG S++E+D+I+KLHA LGN+WSLIA LPGRTDNEIKNYWNSHL R++
Sbjct: 194 LRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKL 361
Score = 109 bits (232), Expect = 8e-023
Identities = 59/115 (51%), Positives = 64/115 (55%)
Frame = -3 / -2
Query: 654 RCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQ 475
R EFQ*FLISLSVRPG+ AIRDHL PR A S RR* IH S Q
Sbjct: 348 R*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEKPPRFRSGRR*FIHLSLQ 169
Query: 474 LLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPIARR 310
L PHRSRPA LG + Q PSP + + S SSS V P L +Q G LPI R
Sbjct: 168 LFPHRSRPAALGRERQHPSP*A*IYWVSLSSSSLVQAPLLLSPLAQQGALPIVSR 4
>gb|CO367178.1|CO367178 RTK1_32_E03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_E03_A029 5', mRNA sequence
Length = 873
Score = 218 bits (470), Expect = 1e-055
Identities = 82/116 (70%), Positives = 92/116 (79%)
Frame = +2 / +1
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR PCC +G WT EED L YI HGEG WRSLPK AGLLRCGKSCRLRWINY
Sbjct: 16 MGRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 195
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRG S++E+D+I+KLHA LGN+WSLIA LPGRTDNEIKNYWNSHL R++
Sbjct: 196 LRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKL 363
Score = 107 bits (228), Expect = 3e-022
Identities = 58/112 (51%), Positives = 63/112 (56%)
Frame = -3 / -2
Query: 654 RCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQ 475
R EFQ*FLISLSVRPG+ AIRDHL PR A S RR* IH S Q
Sbjct: 350 R*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEKPPRFRSGRR*FIHLSLQ 171
Query: 474 LLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPI 319
L PHRSRPA LG + Q PSP + + S SSS V P L +Q G LPI
Sbjct: 170 LFPHRSRPAALGRERQHPSP*A*IYWVSLSSSSLVQAPLLLSPLAQQGALPI 15
>gb|CF391408.1|CF391408 RTDR3_1_E10.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_1_E10_A022 5', mRNA
sequence
Length = 818
Score = 217 bits (469), Expect = 2e-055
Identities = 80/116 (68%), Positives = 94/116 (81%)
Frame = +2 / +1
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCC K GL RG WT +ED +L+ YI HG+G WR LP+ AGL RCGKSCRLRWINY
Sbjct: 34 MGRSPCCSKQGLNRGAWTQKEDTILSEYIRIHGDGKWRHLPEKAGLKRCGKSCRLRWINY 213
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGNIS +EED+I++LH LGNRWSLIA L GRTDNEIKNYWN HL +++
Sbjct: 214 LRPDIKRGNISPDEEDLIVRLHRLLGNRWSLIAGRLAGRTDNEIKNYWNCHLCKKL 381
>gb|CF394327.1|CF394327 RTDS2_4_B08.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_4_B08_A021 5', mRNA sequence
Length = 493
Score = 217 bits (469), Expect = 2e-055
Identities = 80/116 (68%), Positives = 94/116 (81%)
Frame = +2 / +3
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCC K GL RG WT +ED +L+ YI HG+G WR LP+ AGL RCGKSCRLRWINY
Sbjct: 48 MGRSPCCSKQGLNRGAWTQKEDTILSEYIRIHGDGKWRHLPEKAGLKRCGKSCRLRWINY 227
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGNIS +EED+I++LH LGNRWSLIA L GRTDNEIKNYWN HL +++
Sbjct: 228 LRPDIKRGNISPDEEDLIVRLHRLLGNRWSLIAGRLAGRTDNEIKNYWNCHLCKKL 395
>gb|CF395727.1|CF395727 RTDS2_16_B07.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_16_B07_A021 5', mRNA sequence
Length = 782
Score = 217 bits (469), Expect = 2e-055
Identities = 80/116 (68%), Positives = 94/116 (81%)
Frame = +2 / +1
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCC K GL RG WT +ED +L+ YI HG+G WR LP+ AGL RCGKSCRLRWINY
Sbjct: 67 MGRSPCCSKQGLNRGAWTQKEDTILSEYIRIHGDGKWRHLPEKAGLKRCGKSCRLRWINY 246
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
L D+KRGNIS +EED+I++LH LGNRWSLIA LPGRTDNEIKNYWN HL +++
Sbjct: 247 LCPDIKRGNISPDEEDLIVRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNCHLCKKL 414
>gb|BX681391.1|BX681391 BX681391 RS Pinus pinaster cDNA clone RS58C06, mRNA sequence
Length = 605
Score = 217 bits (469), Expect = 2e-055
Identities = 80/115 (69%), Positives = 95/115 (82%)
Frame = +2 / +3
Query: 323 GRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYL 502
GR+PCCEK +G WT EED L +I HGEG WRSLPK AGL+RCGKSCRLRWINYL
Sbjct: 3 GRSPCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINYL 182
Query: 503 RADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
R D+KRGN S+EE+++IIKLH+ LGN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 183 RPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 347
Score = 107 bits (229), Expect = 2e-022
Identities = 56/108 (51%), Positives = 57/108 (52%)
Frame = -3 / -2
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ*F ISLSVRPG AIRDHLLP W S RR* IHRS QL P
Sbjct: 325 FQ*FFISLSVRPGNLPAIRDHLLPSREWSLMMSSSSSSEKFPRFRSGRR*FIHRSLQLFP 146
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLP 322
R PA LGS+ Q PSP M* SSS VH P FSQ G LP
Sbjct: 145 QRISPAALGSERQQPSP*VRM*AMRRSSSSLVHAPLFV*AFSQQGDLP 2
>gb|DR058733.1|DR058733 RTNIT1_13_C07.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_13_C07_A029 5', mRNA sequence
Length = 592
Score = 217 bits (468), Expect = 2e-055
Identities = 81/119 (68%), Positives = 96/119 (80%)
Frame = +2 / +2
Query: 311 RRAMGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRW 490
+ MGR+PCC K GL RG WT ED +L+ YI HG+G WRSLPK AGL RCGKSCRLRW
Sbjct: 23 KSTMGRSPCCAKEGLNRGAWTKTEDIILSEYIRIHGDGGWRSLPKKAGLKRCGKSCRLRW 202
Query: 491 INYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
+NYLR D+KRG+IS EE++II+LH LGNRWSLIA LPGRTDNEIKNYWN+ LS+++
Sbjct: 203 LNYLRPDIKRGDISPAEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTRLSKKL 379
>gb|AW065119.1|AW065119 ST39H05 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST39H05, mRNA sequence
Length = 586
Score = 216 bits (467), Expect = 3e-055
Identities = 80/119 (67%), Positives = 96/119 (80%)
Frame = +2 / +3
Query: 311 RRAMGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRW 490
+ MGR+PCC K GL RG WT ED +L+ YI HG+G WRSLPK AGL RCGKSCRLRW
Sbjct: 66 KSTMGRSPCCAKEGLNRGAWTKTEDIILSEYIRIHGDGGWRSLPKKAGLKRCGKSCRLRW 245
Query: 491 INYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
+NYLR D+KRG++S EE++II+LH LGNRWSLIA LPGRTDNEIKNYWN+ LS+++
Sbjct: 246 LNYLRPDIKRGDVSPAEEELIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTRLSKKL 422
>gb|CF397272.1|CF397272 RTDS3_2_C01.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_2_C01_A022 5', mRNA sequence
Length = 598
Score = 216 bits (467), Expect = 3e-055
Identities = 80/116 (68%), Positives = 93/116 (80%)
Frame = +2 / +3
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCC K GL RG WT +ED +L+ YI HG+G WR LP AGL RCGKSCRLRWINY
Sbjct: 33 MGRSPCCSKQGLNRGAWTQKEDTILSEYIRIHGDGKWRHLPAKAGLKRCGKSCRLRWINY 212
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
L D+KRGNIS +EED+I++LH LGNRWSLIA LPGRTDNEIKNYWN HL +++
Sbjct: 213 LCPDIKRGNISPDEEDLIVRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNCHLCKKL 380
>gb|DR167401.1|DR167401 RTPHOS1_18_C09.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_18_C09_A029 5', mRNA sequence
Length = 850
Score = 216 bits (467), Expect = 3e-055
Identities = 79/121 (65%), Positives = 97/121 (80%)
Frame = +2 / +3
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCC K GL RG WT EED +L+ YI HG+G W+ LP+ AGL RCGKSCRLRW+NY
Sbjct: 36 MGRSPCCSKQGLNRGAWTKEEDMILSTYIQIHGDGGWKILPQKAGLNRCGKSCRLRWMNY 215
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTYR 679
LR D+KRG IS +EED+II++H LGNRWSLIA LPGRTDNEIKNYWN+ LS+++ +
Sbjct: 216 LRPDIKRGRISADEEDLIIRMHRLLGNRWSLIAGRLPGRTDNEIKNYWNTQLSKKLRPLK 395
Query: 680 R 682
+
Sbjct: 396 Q 398
>gb|DR685654.1|DR685654 EST1075731 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAB633 3' end, mRNA sequence
Length = 786
Score = 216 bits (467), Expect = 3e-055
Identities = 80/116 (68%), Positives = 97/116 (83%)
Frame = +2 / +1
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR PCC+KVGLK+G WTAEEDQ L ++I HG WR++PK AGLLRCGKSCRLRW NY
Sbjct: 28 MGRQPCCDKVGLKKGPWTAEEDQKLISFILNHGHCCWRAVPKLAGLLRCGKSCRLRWTNY 207
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRG +S+ EE +II LH+ LGNRWS IA+HLPGRTDNEIKNYWN+H+ +++
Sbjct: 208 LRPDLKRGLLSESEEQLIIDLHSQLGNRWSKIAAHLPGRTDNEIKNYWNTHIKKKL 375
Score = 113 bits (242), Expect = 3e-024
Identities = 56/110 (50%), Positives = 62/110 (56%)
Frame = -3 / -2
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ*FLISLSVRPG+ AI DHLLP W S R+* +H + QLLP
Sbjct: 353 FQ*FLISLSVRPGKCAAILDHLLPSWEWRSIMSCSSDSDKSPRFRSGRK*FVHLNLQLLP 174
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPIA 316
H SRPA G+ Q P M S WSSSAVH P SPT SQHG PI+
Sbjct: 173 HLSRPASFGTARQQQWPWLRMKEMSFWSSSAVHGPFFSPTLSQHGCRPIS 24
>gb|DR694473.1|DR694473 EST1084565 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEC94 3' end, mRNA sequence
Length = 822
Score = 216 bits (467), Expect = 3e-055
Identities = 80/116 (68%), Positives = 97/116 (83%)
Frame = +2 / +3
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR PCC+KVGLK+G WTAEEDQ L ++I HG WR++PK AGLLRCGKSCRLRW NY
Sbjct: 81 MGRQPCCDKVGLKKGPWTAEEDQKLISFILNHGHCCWRAVPKLAGLLRCGKSCRLRWTNY 260
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRG +S+ EE +II LH+ LGNRWS IA+HLPGRTDNEIKNYWN+H+ +++
Sbjct: 261 LRPDLKRGLLSESEEQLIIDLHSQLGNRWSKIAAHLPGRTDNEIKNYWNTHIKKKL 428
Score = 113 bits (242), Expect = 3e-024
Identities = 56/110 (50%), Positives = 62/110 (56%)
Frame = -3 / -3
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ*FLISLSVRPG+ AI DHLLP W S R+* +H + QLLP
Sbjct: 406 FQ*FLISLSVRPGKCAAILDHLLPSWEWRSIMSCSSDSDKSPRFRSGRK*FVHLNLQLLP 227
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPIA 316
H SRPA G+ Q P M S WSSSAVH P SPT SQHG PI+
Sbjct: 226 HLSRPASFGTARQQQWPWLRMKEMSFWSSSAVHGPFFSPTLSQHGCRPIS 77
>gb|DT638742.1|DT638742 EST1153673 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHI92 3' end, mRNA sequence
Length = 822
Score = 216 bits (467), Expect = 3e-055
Identities = 80/116 (68%), Positives = 97/116 (83%)
Frame = +2 / +2
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR PCC+KVGLK+G WTAEEDQ L ++I HG WR++PK AGLLRCGKSCRLRW NY
Sbjct: 89 MGRQPCCDKVGLKKGPWTAEEDQKLISFILNHGHCCWRAVPKLAGLLRCGKSCRLRWTNY 268
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRG +S+ EE +II LH+ LGNRWS IA+HLPGRTDNEIKNYWN+H+ +++
Sbjct: 269 LRPDLKRGLLSESEEQLIIDLHSQLGNRWSKIAAHLPGRTDNEIKNYWNTHIKKKL 436
Score = 113 bits (242), Expect = 3e-024
Identities = 56/110 (50%), Positives = 62/110 (56%)
Frame = -3 / -1
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ*FLISLSVRPG+ AI DHLLP W S R+* +H + QLLP
Sbjct: 414 FQ*FLISLSVRPGKCAAILDHLLPSWEWRSIMSCSSDSDKSPRFRSGRK*FVHLNLQLLP 235
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPIA 316
H SRPA G+ Q P M S WSSSAVH P SPT SQHG PI+
Sbjct: 234 HLSRPASFGTARQQQWPWLRMKEMSFWSSSAVHGPFFSPTLSQHGCRPIS 85
>gb|DR161238.1|DR161238 RTFE1_10_D10.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_10_D10_A029 5', mRNA sequence
Length = 766
Score = 216 bits (466), Expect = 4e-055
Identities = 79/116 (68%), Positives = 97/116 (83%)
Frame = +2 / +3
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCCEK +G WT +ED L +I HGEGSWRSLPK AGLLRCGKSCRLRWINY
Sbjct: 21 MGRSPCCEKAHTNKGAWTKQEDDRLIAHIRAHGEGSWRSLPKAAGLLRCGKSCRLRWINY 200
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRG+ ++EE+++IIKLH+ +GN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 201 LRPDLKRGSFTEEEDELIIKLHSFVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 368
Score = 114 bits (244), Expect = 2e-024
Identities = 59/116 (50%), Positives = 62/116 (53%)
Frame = -3 / -1
Query: 657 LRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSR 478
L C FQ*F ISLSVRPG AI+DHLLP W S RR* IHRS
Sbjct: 358 LMCVFQ*FFISLSVRPGNLPAIKDHLLPTKEWSLMMSSSSSSVKLPRFRSGRR*FIHRSL 179
Query: 477 QLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPIARR 310
QLLPH S PA LG + Q PSP + M* SS V P L FSQHG PI R
Sbjct: 178 QLLPHLSSPAALGRERQLPSPWARM*AIRRSSSCLVQAPLLV*AFSQHGDRPIFHR 11
>gb|DR744198.1|DR744198 RTCU1_20_G08.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_20_G08_A029 5', mRNA sequence
Length = 644
Score = 216 bits (466), Expect = 4e-055
Identities = 82/116 (70%), Positives = 92/116 (79%)
Frame = +2 / +1
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR PCC +G WT EED L YI HGEG WRSLPK AGLLRCGKSCRLRWINY
Sbjct: 79 MGRAPCCSNGDRNKGAWTKEEDDRLIQYIKVHGEGCWRSLPKAAGLLRCGKSCRLRWINY 258
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRG S++E+D+I+KLHA LGN+WSLIA LPGRTDNEIKNYWNSHL R++
Sbjct: 259 LRPDLKRGFFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKL 426
Score = 117 bits (250), Expect = 3e-025
Identities = 61/125 (48%), Positives = 70/125 (56%)
Frame = -3 / -1
Query: 660 RLRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRS 481
R RCEFQ*F ISLSVRPG+ AI+DHL PR A L S RR* IH S
Sbjct: 419 RFRCEFQ*FFISLSVRPGKRPAIKDHLFPRRACSLRIRSSSSSEKNPRLRSGRR*FIHLS 240
Query: 480 RQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPIARRLAP 301
QLLPHRSRPA LG + Q PSP + + S SSS V P Q G LP+ +RL+
Sbjct: 239 LQLLPHRSRPAALGRERQQPSP*TLIYWISLSSSSLVQAPLFLSPLEQQGALPMFKRLSE 60
Query: 300 GNS*R 286
+ R
Sbjct: 59 NKNGR 45
>gb|CF667292.1|CF667292 RTCNT1_29_G02.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_29_G02_A029 3', mRNA sequence
Length = 681
Score = 215 bits (465), Expect = 6e-055
Identities = 77/118 (65%), Positives = 99/118 (83%)
Frame = +2 / -2
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCC K GL RG WTA+ED +L++YI HG+G WR+LP+NAGL+R KSCR+RW+NY
Sbjct: 647 MGRSPCCSKEGLNRGAWTAKEDMILSDYIRIHGDGGWRNLPQNAGLMRRAKSCRIRWLNY 468
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHT 673
LR +KRGNIS +EE++II++H LGNRWSLIA LPGRTDNEIKNYWN+HL +++ +
Sbjct: 467 LRPGIKRGNISHDEEELIIRMHRLLGNRWSLIAGRLPGRTDNEIKNYWNTHLRKKLRS 294
>gb|DR111301.1|DR111301 RTS1_16_F03.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_16_F03_A029 5', mRNA sequence
Length = 729
Score = 215 bits (465), Expect = 6e-055
Identities = 80/116 (68%), Positives = 95/116 (81%)
Frame = +2 / +2
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCCEK +G WT EED+ L +I HGEG WRSLPK AGLLRCGKSCRLRWINY
Sbjct: 14 MGRSPCCEKAHTNKGAWTKEEDRRLIAHIRAHGEGGWRSLPKAAGLLRCGKSCRLRWINY 193
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRG ++EE+++IIKLHA LGN+WSLIA L GRTDNEIKNYWNSH+ +++
Sbjct: 194 LRPDLKRGGFTEEEDELIIKLHAVLGNKWSLIAGRLAGRTDNEIKNYWNSHIKKKL 361
Score = 102 bits (218), Expect = 7e-021
Identities = 55/111 (49%), Positives = 60/111 (54%)
Frame = -3 / -1
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ*F ISLSVRP AIRDHL PR A L S RR* IHRS QL P
Sbjct: 339 FQ*FFISLSVRPANLPAIRDHLFPRTACNLMISSSSSSVKPPRLRSGRR*FIHRSLQLFP 160
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPIAR 313
H S PA LG + Q PSP + + SSS V P L FSQ G LPI++
Sbjct: 159 HLSNPAALGRERQPPSPWALIWAMRRRSSSLVQAPLLV*AFSQQGDLPISQ 7
>gb|DR111427.1|DR111427 RTS1_17_F02.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_17_F02_A029 5', mRNA sequence
Length = 630
Score = 215 bits (465), Expect = 6e-055
Identities = 80/119 (67%), Positives = 97/119 (81%)
Frame = +2 / +2
Query: 311 RRAMGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRW 490
R MGR+PCCEK +G WT EED L YI +GEGSWRSLPK AGL RCGKSCRLRW
Sbjct: 2 RMKMGRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRW 181
Query: 491 INYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
INYLR D+KRG+ ++EE+++IIKLH+ +GN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 182 INYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 358
Score = 115 bits (245), Expect = 1e-024
Identities = 58/109 (53%), Positives = 60/109 (55%)
Frame = -3 / -1
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ*F ISLSVRPG AIRDHLLP W L S RR* IHRS QL P
Sbjct: 336 FQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKLPRLRSGRR*FIHRSLQLFP 157
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPI 319
H PA LG + Q PSP + M* WSSS V P L FSQ G LPI
Sbjct: 156 HLGSPAALGRERQLPSPLARM*AMRRWSSSFVQAPLLV*AFSQQGDLPI 10
>gb|DR011035.1|DR011035 HEAT1_3_A03.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_3_A03_A029 3', mRNA sequence
Length = 790
Score = 215 bits (464), Expect = 8e-055
Identities = 81/116 (69%), Positives = 91/116 (78%)
Frame = +2 / -1
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MG PCC +G WT EED L YI HGEG WRSLPK AGLLRCGKSCRLRWINY
Sbjct: 781 MGSAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 602
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRG S++E+D+I+KLHA LGN+WSLIA LPGRTDNEIKNYWNSHL R++
Sbjct: 601 LRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKL 434
Score = 107 bits (228), Expect = 3e-022
Identities = 58/112 (51%), Positives = 63/112 (56%)
Frame = -3 / +3
Query: 654 RCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQ 475
R EFQ*FLISLSVRPG+ AIRDHL PR A S RR* IH S Q
Sbjct: 447 R*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEKPPRFRSGRR*FIHLSLQ 626
Query: 474 LLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPI 319
L PHRSRPA LG + Q PSP + + S SSS V P L +Q G LPI
Sbjct: 627 LFPHRSRPAALGRERQHPSP*A*IYWVSLSSSSLVQAPLLLSPLAQQGALPI 782
>gb|DR020720.1|DR020720 STRS1_38_G12.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_38_G12_A034 5', mRNA sequence
Length = 688
Score = 215 bits (464), Expect = 8e-055
Identities = 79/120 (65%), Positives = 95/120 (79%)
Frame = +2 / +3
Query: 305 ASRRAMGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRL 484
A + MGR+PCC K GL RG WT +ED +L+ YI HG G WR+LP+ AGL RCGKSCRL
Sbjct: 3 AKKSRMGRSPCCSKQGLNRGTWTEKEDMILSEYIRLHGNGGWRNLPQKAGLKRCGKSCRL 182
Query: 485 RWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQ 664
RW NYLR D+KRGNIS +EED+I+++ LGNRWSLIA LPGRTDNEIKNYWN+ LS++
Sbjct: 183 RWTNYLRPDIKRGNISPDEEDLIVRMRRLLGNRWSLIAGRLPGRTDNEIKNYWNTRLSKK 362
>gb|CF387084.1|CF387084 RTDR1_10_E10.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_10_E10_A015 5', mRNA
sequence
Length = 733
Score = 215 bits (463), Expect = 1e-054
Identities = 80/116 (68%), Positives = 95/116 (81%)
Frame = +2 / +3
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+ CCEK +G WT EED L +I HGEG WRSLPK AGL+RCGKSCRLRWINY
Sbjct: 12 MGRSFCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINY 191
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S+EE+++IIKLH+ LGN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 192 LRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 359
Score = 103 bits (220), Expect = 3e-021
Identities = 55/109 (50%), Positives = 56/109 (51%)
Frame = -3 / -1
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ*F ISLSVRPG AIRDHLLP W S RR* IHRS QL P
Sbjct: 337 FQ*FFISLSVRPGNLPAIRDHLLPSREWSLMMSSSSSSEKFPRFRSGRR*FIHRSLQLFP 158
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPI 319
R PA LGS+ Q PSP M SSS VH P FSQ LPI
Sbjct: 157 QRISPAALGSERQQPSP*VRMWAMRRSSSSLVHAPLFV*AFSQQKDLPI 11
>gb|CF399612.1|CF399612 RTDS3_26_H01.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_26_H01_A022 5', mRNA sequence
Length = 387
Score = 215 bits (463), Expect = 1e-054
Identities = 79/115 (68%), Positives = 92/115 (80%)
Frame = +2 / +2
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCC K GL RG WT +ED +L+ YI HG+G WR LP AGL RCGKSCRLRWINY
Sbjct: 41 MGRSPCCSKQGLNRGAWTQKEDTILSEYIRIHGDGKWRHLPAKAGLKRCGKSCRLRWINY 220
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQ 664
L D+KRGNIS +EED+I++LH LGNRWSLIA LPGRTDNE+KNYWN HL ++
Sbjct: 221 LCPDIKRGNISPDEEDLIVRLHRLLGNRWSLIAGRLPGRTDNELKNYWNCHLCKK 385
>gb|BQ701670.1|BQ701670 NXSI_118_C02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_118_C02 5' similar to Arabidopsis thaliana
sequence At4g38620 putative transcription factor (MYB4)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 549
Score = 214 bits (462), Expect = 1e-054
Identities = 79/116 (68%), Positives = 95/116 (81%)
Frame = +2 / +2
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGRTPCCEK +G WT EED L +I HGEG WRSLPK AGLLRCGKSCRLRWINY
Sbjct: 26 MGRTPCCEKAHTNKGAWTQEEDARLVAHIQAHGEGGWRSLPKAAGLLRCGKSCRLRWINY 205
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S++E+++IIK H+ LGN+WSLIA LPGRTDNEIKN+WN+H+ +++
Sbjct: 206 LRPDLKRGNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKL 373
Score = 120 bits (257), Expect = 3e-026
Identities = 60/113 (53%), Positives = 63/113 (55%)
Frame = -3 / -1
Query: 657 LRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSR 478
L C FQ F ISLSVRPG+ AIRDHL PR W S RR* IHRS
Sbjct: 363 LMCVFQWFFISLSVRPGKIRAIRDHLFPRREWNLMMSSSSCSEKFPRFKSGRR*FIHRSL 184
Query: 477 QLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPI 319
QL PHRS PA LG + Q PSPC+ M SSS V P L FSQ GVLPI
Sbjct: 183 QLFPHRSNPAALGRERQPPSPCA*MCATRRASSS*VQAPLLV*AFSQQGVLPI 25
>gb|CF388652.1|CF388652 RTDR2_4_A10.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_4_A10_A021 5', mRNA
sequence
Length = 760
Score = 214 bits (462), Expect = 1e-054
Identities = 79/116 (68%), Positives = 96/116 (82%)
Frame = +2 / +1
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCCEK +G WT EED L YI +GEGSWRSLPK AGL RCGKSCRLRWINY
Sbjct: 25 MGRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINY 204
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRG+ ++EE+++IIKLH+ +GN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 205 LRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 372
Score = 115 bits (245), Expect = 1e-024
Identities = 58/109 (53%), Positives = 60/109 (55%)
Frame = -3 / -3
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ*F ISLSVRPG AIRDHLLP W L S RR* IHRS QL P
Sbjct: 350 FQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKLPRLRSGRR*FIHRSLQLFP 171
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPI 319
H PA LG + Q PSP + M* WSSS V P L FSQ G LPI
Sbjct: 170 HLGSPAALGRERQLPSPLARM*AMRRWSSSFVQAPLLV*AFSQQGDLPI 24
>gb|CV034082.1|CV034082 RTNACL1_38_B11.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_38_B11_A029 5', mRNA sequence
Length = 734
Score = 214 bits (462), Expect = 1e-054
Identities = 79/116 (68%), Positives = 96/116 (82%)
Frame = +2 / +2
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCCEK +G WT EED L YI +GEGSWRSLPK AGL RCGKSCRLRWINY
Sbjct: 2 MGRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINY 181
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRG+ ++EE+++IIKLH+ +GN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 182 LRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 349
Score = 115 bits (245), Expect = 1e-024
Identities = 58/109 (53%), Positives = 60/109 (55%)
Frame = -3 / -3
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ*F ISLSVRPG AIRDHLLP W L S RR* IHRS QL P
Sbjct: 327 FQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKLPRLRSGRR*FIHRSLQLFP 148
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPI 319
H PA LG + Q PSP + M* WSSS V P L FSQ G LPI
Sbjct: 147 HLGSPAALGRERQLPSPLARM*AMRRWSSSFVQAPLLV*AFSQQGDLPI 1
>gb|DR014768.1|DR014768 HEAT1_51_B07.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_B07_A029 5', mRNA sequence
Length = 928
Score = 214 bits (462), Expect = 1e-054
Identities = 79/116 (68%), Positives = 95/116 (81%)
Frame = +2 / +1
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGRTPCCEK +G WT EED L +I HGEG WRSLPK AGLLRCGKSCRLRWINY
Sbjct: 37 MGRTPCCEKAHTNKGAWTQEEDARLVAHIQAHGEGGWRSLPKAAGLLRCGKSCRLRWINY 216
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S++E+++IIK H+ LGN+WSLIA LPGRTDNEIKN+WN+H+ +++
Sbjct: 217 LRPDLKRGNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKL 384
Score = 120 bits (257), Expect = 3e-026
Identities = 60/113 (53%), Positives = 63/113 (55%)
Frame = -3 / -3
Query: 657 LRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSR 478
L C FQ F ISLSVRPG+ AIRDHL PR W S RR* IHRS
Sbjct: 374 LMCVFQWFFISLSVRPGKIRAIRDHLFPRREWNLMMSSSSCSEKFPRFKSGRR*FIHRSL 195
Query: 477 QLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPI 319
QL PHRS PA LG + Q PSPC+ M SSS V P L FSQ GVLPI
Sbjct: 194 QLFPHRSNPAALGRERQPPSPCA*MCATRRASSS*VQAPLLV*AFSQQGVLPI 36
>gb|DR117116.1|DR117116 RTMG1_4_G10.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_4_G10_A029 5', mRNA sequence
Length = 805
Score = 214 bits (462), Expect = 1e-054
Identities = 78/116 (67%), Positives = 96/116 (82%)
Frame = +2 / +1
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCCEK +G WT +ED L +I HGEG WRSLPK AGLLRCGKSCRLRWINY
Sbjct: 22 MGRSPCCEKAHTNKGAWTKQEDDRLIAHIRAHGEGGWRSLPKAAGLLRCGKSCRLRWINY 201
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRG+ ++EE+++IIKLH+ +GN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 202 LRPDLKRGSFTEEEDELIIKLHSFVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 369
Score = 114 bits (244), Expect = 2e-024
Identities = 58/113 (51%), Positives = 61/113 (53%)
Frame = -3 / -3
Query: 657 LRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSR 478
L C FQ*F ISLSVRPG AI+DHLLP W S RR* IHRS
Sbjct: 359 LMCVFQ*FFISLSVRPGNLPAIKDHLLPTKEWSLMMSSSSSSVKLPRFRSGRR*FIHRSL 180
Query: 477 QLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGVLPI 319
QLLPH S PA LG + Q PSP + M* SS V P L FSQHG PI
Sbjct: 179 QLLPHLSSPAALGRERQPPSPWARM*AIRRSSSCLVQAPLLV*AFSQHGDRPI 21
>gb|DR384384.1|DR384384 RTHG1_1_H06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_1_H06_A029 5', mRNA sequence
Length = 739
Score = 214 bits (462), Expect = 1e-054
Identities = 80/116 (68%), Positives = 92/116 (79%)
Frame = +2 / +1
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR PCC K GL +G W EED +L +YI HG G WR LP+ AGL RCGKSCRLRWINY
Sbjct: 46 MGRAPCCSKQGLNQGPWKPEEDMILCDYIRIHGPGRWRDLPQKAGLQRCGKSCRLRWINY 225
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR DVKRGNIS +EED+II++H LGNRWSLIA LPGRTDNEIKN+WN HL +++
Sbjct: 226 LRPDVKRGNISIDEEDVIIRMHRLLGNRWSLIAGRLPGRTDNEIKNHWNFHLQKKV 393
>gb|DR384689.1|DR384689 RTHG1_3_H06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_3_H06_A029 5', mRNA sequence
Length = 820
Score = 214 bits (462), Expect = 1e-054
Identities = 80/116 (68%), Positives = 92/116 (79%)
Frame = +2 / +1
Query: 320 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR PCC K GL +G W EED +L +YI HG G WR LP+ AGL RCGKSCRLRWINY
Sbjct: 46 MGRAPCCSKQGLNQGPWKPEEDMILCDYIRIHGPGRWRDLPQKAGLQRCGKSCRLRWINY 225
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR DVKRGNIS +EED+II++H LGNRWSLIA LPGRTDNEIKN+WN HL +++
Sbjct: 226 LRPDVKRGNISIDEEDVIIRMHRLLGNRWSLIAGRLPGRTDNEIKNHWNFHLQKKV 393
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 792,884,479
Number of Sequences: 355925
Number of extensions: 11373079
Number of successful extensions: 70968
Number of sequences better than 1.0e-020: 238
length of database: 72,425,745
effective HSP length: 55
effective length of database: 52,849,870
effective search space used: 28803179150
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)