TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= L18925.2.1
(1221 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF006210.1|AF006210 Pinus resinosa MADS box transcriptio... 154 8e-065
gb|AF023615.1|AF023615 Pinus radiata MADS box protein mRNA,... 154 1e-064
emb|Y09611.1|PRMADS1 P.resinosa mRNA for MADS-box protein 130 3e-049
gb|U42400.1|PRU42400 Pinus radiata putative MADS-box family... 130 3e-049
gb|DR058437.1|DR058437 RTNIT1_11_F11.g1_A029 Roots minus ni... 122 2e-048
gb|U76726.1|PRU76726 Pinus radiata MADS-box protein (PrMADS... 132 4e-048
gb|CX713803.1|CX713803 RTPQ1_13_F12.b1_A032 Roots treated w... 142 7e-048
gb|CO161575.1|CO161575 FLD1_29_F09.g1_A029 Root flooded Pin... 142 4e-047
gb|CO161503.1|CO161503 FLD1_29_F09.b1_A029 Root flooded Pin... 142 4e-047
gb|CO364847.1|CO364847 RTK1_22_D10.b1_A029 Roots minus pota... 122 4e-047
gb|CV031753.1|CV031753 RTNACL1_3_B05.g1_A029 Roots plus add... 122 4e-047
gb|CF389963.1|CF389963 RTDR2_11_B08.g1_A021 Loblolly pine r... 142 4e-047
gb|CF389852.1|CF389852 RTDR2_11_B08.b1_A021 Loblolly pine r... 142 7e-047
gb|CO201105.1|CO201105 RTCNT2_3_D12.g1_A029 Root control 2 ... 122 1e-046
gb|CF388137.1|CF388137 RTDR2_1_D05.b1_A021 Loblolly pine ro... 142 2e-046
gb|DR109660.1|DR109660 RTS1_3_G12.g1_A029 Roots minus sulfu... 114 5e-045
gb|DR060889.1|DR060889 RTNIT1_30_D12.g1_A029 Roots minus ni... 124 2e-044
gb|CX645252.1|CX645252 COLD1_1_H11.b1_A029 Root cold Pinus ... 114 2e-044
gb|CO364965.1|CO364965 RTK1_22_G09.g1_A029 Roots minus pota... 124 3e-044
gb|DR178004.1|DR178004 RTMNUT1_8_E05.g1_A029 Roots minus mi... 122 3e-044
gb|DR090702.1|DR090702 RTAL1_16_G11.g1_A029 Roots plus adde... 124 1e-043
gb|AW010398.1|AW010398 ST06D02 Pine TriplEx shoot tip libra... 132 2e-043
gb|BQ290846.1|BQ290846 NXRV050_D03_F NXRV (Nsf Xylem Root w... 132 2e-043
gb|CO200411.1|CO200411 GEO2_7_G03.b1_A032 Root gravitropism... 122 2e-043
gb|CF670172.1|CF670172 RTCNT1_48_B11.g1_A029 Root control P... 111 4e-043
gb|U90344.1|PRU90344 Pinus radiata putative MADS box transc... 124 6e-043
gb|DR384822.1|DR384822 RTHG1_4_G03.g1_A029 Roots plus added... 124 6e-043
gb|CF394057.1|CF394057 RTDS2_3_D04.b1_A021 Drought-stressed... 118 1e-042
gb|CF475501.1|CF475501 RTWW2_12_G12.g1_A021 Well-watered lo... 124 2e-042
gb|CV033324.1|CV033324 RTNACL1_33_G03.g1_A029 Roots plus ad... 120 3e-042
gb|DR079072.1|DR079072 RTFEPL1_8_G11.g1_A029 Roots plus add... 124 4e-042
gb|CO163263.1|CO163263 FLD1_40_B04.g1_A029 Root flooded Pin... 124 1e-041
gb|U42399.1|PRU42399 Pinus radiata putative MADS-box family... 118 2e-041
gb|CX650850.1|CX650850 COLD1_48_B09.g1_A029 Root cold Pinus... 111 1e-040
gb|U90345.1|PRU90345 Pinus radiata putative MADS box transc... 111 2e-040
gb|CO170901.1|CO170901 NDL1_17_E10.g1_A029 Needles control ... 110 2e-040
gb|DR012819.1|DR012819 HEAT1_15_E08.b1_A029 Root at 37 C fo... 110 3e-040
gb|CO363306.1|CO363306 RTK1_8_H10.g1_A029 Roots minus potas... 110 5e-040
gb|CF388230.1|CF388230 RTDR2_1_D05.g1_A021 Loblolly pine ro... 108 5e-040
gb|DR069454.1|DR069454 RTDK1_7_H04.b1_A029 Roots, dark Pinu... 108 2e-039
gb|CF665739.1|CF665739 RTCNT1_18_D05.b1_A029 Root control P... 120 2e-039
gb|CO200495.1|CO200495 GEO2_7_G03.g1_A032 Root gravitropism... 122 3e-039
gb|DR051726.1|DR051726 RTBOR1_32_A11.b1_A029 Roots plus add... 114 5e-039
gb|DR051801.1|DR051801 RTBOR1_32_A11.g1_A029 Roots plus add... 114 6e-039
gb|DR069761.1|DR069761 RTDK1_9_F10.b1_A029 Roots, dark Pinu... 114 6e-039
gb|DR177222.1|DR177222 RTMNUT1_3_H10.g1_A029 Roots minus mi... 114 6e-039
gb|CO169756.1|CO169756 NDL1_9_A05.g1_A029 Needles control P... 117 6e-039
gb|CX645838.1|CX645838 COLD1_5_D01.g1_A029 Root cold Pinus ... 114 6e-039
gb|BX252374.1|BX252374 BX252374 Pinus pinaster differenciat... 118 6e-039
gb|DR742217.1|DR742217 RTCU1_2_C05.g1_A029 Roots plus added... 114 8e-039
gb|CX715901.1|CX715901 RTPQ1_37_G08.g1_A032 Roots treated w... 114 8e-039
gb|CO175129.1|CO175129 NDL1_48_D06.g1_A029 Needles control ... 105 1e-038
gb|U90346.1|PRU90346 Pinus radiata putative MADS box transc... 114 3e-038
gb|DR178023.1|DR178023 RTMNUT1_8_F12.g1_A029 Roots minus mi... 112 3e-038
gb|DR072089.1|DR072089 RTDK1_24_B10.b1_A029 Roots, dark Pin... 112 3e-038
gb|DR098149.1|DR098149 STRR1_39_A06.g1_A033 Stem Response R... 114 4e-038
gb|DR090622.1|DR090622 RTAL1_16_G11.b1_A029 Roots plus adde... 103 7e-038
gb|CO367965.1|CO367965 RTK1_37_F12.g1_A029 Roots minus pota... 112 1e-037
gb|CO157702.1|CO157702 FLD1_1_B06.g1_A029 Root flooded Pinu... 112 1e-037
gb|U90347.1|PRU90347 Pinus radiata putative MADS box transc... 106 2e-037
gb|CX713558.1|CX713558 RTPQ1_10_E02.g1_A032 Roots treated w... 124 2e-037
gb|U90349.1|PRU90349 Pinus radiata putative MADS box transc... 108 9e-037
gb|DR168055.1|DR168055 RTPHOS1_22_H02.g1_A029 Roots minus p... 117 9e-037
gb|CO197079.1|CO197079 GEO1_3_F06.g1_A029 Root gravitropism... 112 2e-036
gb|BG318417.1|BG318417 NXPV_013_D07_F NXPV (Nsf Xylem Plani... 124 2e-036
gb|CV033251.1|CV033251 RTNACL1_33_G03.b1_A029 Roots plus ad... 97 2e-035
gb|CF401468.1|CF401468 RTWW1_12_E09.g1_A015 Well-watered lo... 115 4e-035
gb|CX650456.1|CX650456 COLD1_45_F12.g1_A029 Root cold Pinus... 114 7e-035
gb|DR079733.1|DR079733 RTFEPL1_17_F02.b1_A029 Roots plus ad... 77 9e-035
gb|CF394132.1|CF394132 RTDS2_3_D04.g1_A021 Drought-stressed... 86 2e-033
gb|DR013883.1|DR013883 HEAT1_22_D05.b1_A029 Root at 37 C fo... 142 6e-033
gb|AA556486.1|AA556486 341 Loblolly pine C Pinus taeda cDNA... 116 8e-033
gb|DR177921.1|DR177921 RTMNUT1_8_E05.b1_A029 Roots minus mi... 86 4e-032
gb|BE451798.1|BE451798 NXCI_002_D03_F NXCI (Nsf Xylem Compr... 108 4e-032
gb|DR016118.1|DR016118 STRS1_7_G02.g1_A034 Shoot tip pitch ... 87 7e-032
dbj|DD014347.1| Compositions and Methods for the Modificati... 115 1e-031
gb|DR167777.1|DR167777 RTPHOS1_21_A12.b1_A029 Roots minus p... 136 4e-031
gb|BQ654531.1|BQ654531 NXRV081_H04_F NXRV (Nsf Xylem Root w... 132 5e-030
gb|AW010611.1|AW010611 ST08G08 Pine TriplEx shoot tip libra... 111 3e-029
gb|BF517018.1|BF517018 NXSI_008_C03_F NXSI (Nsf Xylem Side ... 108 3e-029
gb|AW587800.1|AW587800 ST67B08 Pine TriplEx shoot tip libra... 129 4e-029
gb|CO201026.1|CO201026 RTCNT2_3_D12.b1_A029 Root control 2 ... 86 1e-028
gb|AW754659.1|AW754659 PC04G10 Pine TriplEx pollen cone lib... 126 4e-028
gb|AL749789.1|AL749789 AL749789 AS Pinus pinaster cDNA clon... 124 1e-027
gb|BG318835.1|BG318835 NXPV_020_D12_F NXPV (Nsf Xylem Plani... 124 1e-027
gb|BQ696809.1|BQ696809 NXPV_045_E02_F NXPV (Nsf Xylem Plani... 124 1e-027
gb|CX713480.1|CX713480 RTPQ1_9_E04.g1_A032 Roots treated wi... 124 1e-027
gb|BG625803.1|BG625803 NXPV_066_C06_F NXPV (Nsf Xylem Plani... 124 1e-027
gb|U90348.1|PRU90348 Pinus radiata putative MADS box transc... 124 1e-027
gb|AW290406.1|AW290406 NXNV019H03F Nsf Xylem Normal wood Ve... 122 7e-027
gb|CD027064.1|CD027064 NXNV019H03 Nsf Xylem Normal wood Ver... 122 7e-027
gb|CF668263.1|CF668263 RTCNT1_35_A03.g1_A029 Root control P... 122 7e-027
gb|AW226013.1|AW226013 ST76C10 Pine TriplEx shoot tip libra... 100 2e-026
gb|CF476348.1|CF476348 RTWW2_22_G12.g1_A021 Well-watered lo... 120 2e-026
gb|DR112977.1|DR112977 RTS1_32_C04.b1_A029 Roots minus sulf... 120 2e-026
gb|CF399403.1|CF399403 RTDS3_28_D02.g1_A022 Drought-stresse... 119 5e-026
gb|CO365540.1|CO365540 RTK1_17_D10.g1_A029 Roots minus pota... 119 5e-026
gb|DR167232.1|DR167232 RTPHOS1_17_B11.g1_A029 Roots minus p... 119 5e-026
gb|CF392697.1|CF392697 RTDR3_5_H09.g1_A022 Loblolly pine ro... 118 6e-026
gb|CF477439.1|CF477439 RTWW3_7_F06.g1_A022 Well-watered lob... 118 6e-026
gb|CF398147.1|CF398147 RTDS3_21_G07.b1_A022 Drought-stresse... 86 1e-025
gb|DR058453.1|DR058453 RTNIT1_11_H04.g1_A029 Roots minus ni... 71 2e-025
gb|AW981881.1|AW981881 PC19G08 Pine TriplEx pollen cone lib... 116 3e-025
gb|DR081124.1|DR081124 RTFEPL1_27_C11.g1_A029 Roots plus ad... 116 4e-025
gb|CX646655.1|CX646655 COLD1_10_E03.g1_A029 Root cold Pinus... 90 1e-024
gb|BE187247.1|BE187247 NXNV_76_C05_F Nsf Xylem Normal wood ... 114 2e-024
gb|DR101425.1|DR101425 STRR1_73_B10.b1_A033 Stem Response R... 112 4e-024
gb|DR072321.1|DR072321 RTDK1_25_B07.g1_A029 Roots, dark Pin... 112 5e-024
gb|CF476374.1|CF476374 RTWW2_22_E12.g1_A021 Well-watered lo... 111 1e-023
gb|CX650380.1|CX650380 COLD1_45_F12.b1_A029 Root cold Pinus... 76 2e-023
gb|AF120097.1|AF120097 Pinus radiata DEF/GLO-like protein (... 110 3e-023
gb|BF220652.1|BF220652 NXCI_151_A10_F NXCI (Nsf Xylem Compr... 107 1e-022
gb|BF778113.1|BF778113 NXSI_077_C08_F NXSI (Nsf Xylem Side ... 107 1e-022
gb|BI643995.1|BI643995 NXPV_133_H06_F NXPV (Nsf Xylem Plani... 107 1e-022
gb|DR069846.1|DR069846 RTDK1_9_F10.g1_A029 Roots, dark Pinu... 68 5e-022
gb|AL750172.1|AL750172 AL750172 AS Pinus pinaster cDNA clon... 103 3e-021
gb|BM134188.1|BM134188 NXLV_017_H01_F NXLV (Nsf Xylem Late ... 103 3e-021
gb|CX645319.1|CX645319 COLD1_1_H11.g1_A029 Root cold Pinus ... 86 6e-021
gb|AL749853.1|AL749853 AL749853 AS Pinus pinaster cDNA clon... 102 6e-021
gb|AW985380.1|AW985380 NXNV_134_G01_F Nsf Xylem Normal wood... 102 6e-021
gb|BE644116.1|BE644116 NXCI_054_F11_F NXCI (Nsf Xylem Compr... 102 6e-021
gb|BF778396.1|BF778396 NXSI_082_G07_F NXSI (Nsf Xylem Side ... 102 6e-021
gb|BG040082.1|BG040082 NXSI_106_C09_F NXSI (Nsf Xylem Side ... 102 6e-021
gb|CV035951.1|CV035951 RTNACL1_43_D02.g1_A029 Roots plus ad... 102 6e-021
gb|AA739846.1|AA739846 611 PtIFG2 Pinus taeda cDNA clone 89... 101 8e-021
gb|AI725123.1|AI725123 1022 PtIFG2 Pinus taeda cDNA clone 8... 101 8e-021
gb|BF186169.1|BF186169 NXCI_133_G11_F NXCI (Nsf Xylem Compr... 101 8e-021
gb|BF609658.1|BF609658 NXSI_047_G05_F NXSI (Nsf Xylem Side ... 101 8e-021
gb|BF777427.1|BF777427 NXSI_071_E03_F NXSI (Nsf Xylem Side ... 101 8e-021
gb|BG039483.1|BG039483 NXSI_099_F04_F NXSI (Nsf Xylem Side ... 101 8e-021
gb|BG318888.1|BG318888 NXPV_021_A10_F NXPV (Nsf Xylem Plani... 101 8e-021
gb|BQ695742.1|BQ695742 NXPV_032_B10_F NXPV (Nsf Xylem Plani... 101 8e-021
gb|CD028456.1|CD028456 NXSI_119_C03_F NXSI (Nsf Xylem Side ... 101 8e-021
gb|CF389480.1|CF389480 RTDR2_7_A07.g1_A021 Loblolly pine ro... 101 8e-021
gb|CF671036.1|CF671036 RTCNT1_54_F06.b1_A029 Root control P... 101 8e-021
gb|CF671146.1|CF671146 RTCNT1_55_C04.b1_A029 Root control P... 101 8e-021
gb|CO361066.1|CO361066 NDL2_2_B04.g1_A029 Needles control 2... 101 8e-021
gb|CV034382.1|CV034382 RTNACL1_40_C07.g1_A029 Roots plus ad... 101 8e-021
gb|CX650315.1|CX650315 COLD1_44_H01.g1_A029 Root cold Pinus... 101 8e-021
gb|DR112834.1|DR112834 RTS1_31_A11.b1_A029 Roots minus sulf... 101 8e-021
gb|DR169156.1|DR169156 RTPHOS1_30_A07.g1_A029 Roots minus p... 101 8e-021
gb|DR742675.1|DR742675 RTCU1_5_F06.g2_A029 Roots plus added... 101 8e-021
>gb|AF006210.1|AF006210 Pinus resinosa MADS box transcription factor mRNA, complete cds
Length = 1726
Score = 154 bits (331), Expect(2) = 8e-065
Identities = 65/74 (87%), Positives = 70/74 (94%)
Frame = -1 / +1
Query: 1113 VASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 934
V MGRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE+
Sbjct: 466 VQIMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEF 645
Query: 933 ANNSVKATVERYKK 892
AN+SVK T+ERYKK
Sbjct: 646 ANHSVKRTIERYKK 687
Score = 114 bits (243), Expect(2) = 8e-065
Identities = 48/92 (52%), Positives = 69/92 (75%)
Frame = -1 / +1
Query: 855 LEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRAR 676
+ + Q++QQE+ KLR QI++LQN NRHL+GD + L++KELKQLE RLEKGIS++R++
Sbjct: 718 ISESNSQYWQQEAGKLRQQIEILQNANRHLMGDGLTALNIKELKQLEVRLEKGISRVRSK 897
Query: 675 KSELLAAEISYMAKRETELQNDHMTLRTKIEE 580
K+E+L EI M +RE L ++ LR+KI E
Sbjct: 898 KNEMLLEEIDIMQRREHILIQENEILRSKIAE 993
>gb|AF023615.1|AF023615 Pinus radiata MADS box protein mRNA, complete cds
Length = 922
Score = 154 bits (331), Expect(2) = 1e-064
Identities = 65/74 (87%), Positives = 70/74 (94%)
Frame = -1 / +2
Query: 1113 VASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 934
V MGRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE+
Sbjct: 5 VQIMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEF 184
Query: 933 ANNSVKATVERYKK 892
AN+SVK T+ERYKK
Sbjct: 185 ANHSVKRTIERYKK 226
Score = 113 bits (241), Expect(2) = 1e-064
Identities = 48/92 (52%), Positives = 68/92 (73%)
Frame = -1 / +2
Query: 855 LEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRAR 676
+ + Q++QQE+ KLR QI +LQN NRHL+GD + L++KELKQLE RLEKGIS++R++
Sbjct: 257 ISESNSQYWQQEAGKLRQQIDILQNANRHLMGDGLTALNIKELKQLEVRLEKGISRVRSK 436
Query: 675 KSELLAAEISYMAKRETELQNDHMTLRTKIEE 580
K+E+L EI M +RE L ++ LR+KI E
Sbjct: 437 KNEMLLEEIDIMQRREHILIQENEILRSKIAE 532
>emb|Y09611.1|PRMADS1 P.resinosa mRNA for MADS-box protein
Length = 1073
Score = 130 bits (279), Expect(2) = 3e-049
Identities = 54/75 (72%), Positives = 64/75 (85%)
Frame = -1 / +1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGR+E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 76 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 255
Query: 924 SVKATVERYKKAHTV 880
+ T+ERY+K V
Sbjct: 256 GMLKTLERYQKCSYV 300
Score = 85.8 bits (181), Expect(2) = 3e-049
Identities = 34/90 (37%), Positives = 63/90 (70%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q + QE KL+ ++++LQ + RHL+G+ +G LS+KEL+QLE +LE ++ +R+RK++++
Sbjct: 334 QNWHQEVGKLKARVELLQRSQRHLLGEDLGPLSIKELQQLERQLEVALTHVRSRKTQVML 513
Query: 657 AEISYMAKRETELQNDHMTLRTKIEEGEQQ 568
+ + ++E LQ + +LR K++E E Q
Sbjct: 514 EMMDELRRKERILQEVNKSLRKKLQEAEGQ 603
>gb|U42400.1|PRU42400 Pinus radiata putative MADS-box family transcription factor (PrMADS2)
mRNA, complete cds
Length = 1064
Score = 130 bits (279), Expect(2) = 3e-049
Identities = 54/75 (72%), Positives = 64/75 (85%)
Frame = -1 / +2
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGR+E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 95 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 274
Query: 924 SVKATVERYKKAHTV 880
+ T+ERY+K V
Sbjct: 275 GMLKTLERYQKCSYV 319
Score = 85.8 bits (181), Expect(2) = 3e-049
Identities = 34/90 (37%), Positives = 63/90 (70%)
Frame = -1 / +2
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q + QE KL+ ++++LQ + RHL+G+ +G LS+KEL+QLE +LE ++ +R+RK++++
Sbjct: 353 QNWHQEVGKLKARVELLQRSQRHLLGEDLGPLSIKELQQLERQLEVALTHVRSRKTQVML 532
Query: 657 AEISYMAKRETELQNDHMTLRTKIEEGEQQ 568
+ + ++E LQ + +LR K++E E Q
Sbjct: 533 EMMDELRRKERILQEVNKSLRKKLQEAEGQ 622
>gb|DR058437.1|DR058437 RTNIT1_11_F11.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_11_F11_A029 5', mRNA sequence
Length = 795
Score = 122 bits (260), Expect(3) = 2e-048
Identities = 50/69 (72%), Positives = 59/69 (85%)
Frame = -1 / +3
Query: 1128 EQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRG 949
E GI+ MGRG+IEIK+IEN+ RQVTFCKRR GL+KKAYELSVLCDA+VALIVFSSRG
Sbjct: 177 ETLGILLKMGRGKIEIKKIENSVHRQVTFCKRRGGLMKKAYELSVLCDADVALIVFSSRG 356
Query: 948 RLYEYANNS 922
+LYE ++
Sbjct: 357 KLYELGTSN 383
Score = 87.7 bits (185), Expect(3) = 2e-048
Identities = 37/83 (44%), Positives = 61/83 (73%)
Frame = -1 / +3
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
+QE L+ QI L+ TNR+L+G+ +G++S +EL QLESRL++GI+++RA+K EL+ EI
Sbjct: 486 KQEINLLKQQIDQLKLTNRYLMGEGLGSVSFEELNQLESRLQRGINQVRAKKHELMLDEI 665
Query: 648 SYMAKRETELQNDHMTLRTKIEE 580
+ +E L+ ++M L+ K+EE
Sbjct: 666 RALQSKEHTLRINNMMLQEKLEE 734
Score = 22.6 bits (43), Expect(3) = 2e-048
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = -1 / +3
Query: 930 NNSVKATVERYKK 892
NNS+++ +ERY+K
Sbjct: 390 NNSMRSILERYQK 428
>gb|U76726.1|PRU76726 Pinus radiata MADS-box protein (PrMADS3) mRNA, complete cds
Length = 1130
Score = 132 bits (282), Expect(2) = 4e-048
Identities = 52/71 (73%), Positives = 66/71 (92%)
Frame = -1 / +1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGR++++RIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+A++
Sbjct: 1 MGRGRVQLRRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFASS 180
Query: 924 SVKATVERYKK 892
S+ T+ERY+K
Sbjct: 181 SMNKTLERYEK 213
Score = 80.8 bits (170), Expect(2) = 4e-048
Identities = 32/88 (36%), Positives = 61/88 (69%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q + QE KL+ ++++LQ + RHL+G+ +G L++KEL+QLE +LE ++ +R+RK++++
Sbjct: 262 QNWHQEVTKLKGKVELLQRSQRHLLGEDLGPLNVKELQQLERQLEVALTHLRSRKTQVML 441
Query: 657 AEISYMAKRETELQNDHMTLRTKIEEGE 574
+I + +RE L + +L+ K+ E E
Sbjct: 442 DQIEELRQRERLLHEVNKSLQKKLSETE 525
>gb|CX713803.1|CX713803 RTPQ1_13_F12.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_13_F12_A032 3', mRNA sequence
Length = 586
Score = 142 bits (304), Expect(2) = 7e-048
Identities = 58/71 (81%), Positives = 66/71 (92%)
Frame = -1 / -3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG+IEIKRIEN T+RQVTF KRRNGLLKKAYELSVLCDAEVA+I+FS+RG+LYE+AN
Sbjct: 482 MGRGKIEIKRIENTTNRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSNRGKLYEFANK 303
Query: 924 SVKATVERYKK 892
SV T+ERYKK
Sbjct: 302 SVNRTIERYKK 270
Score = 69.8 bits (146), Expect(2) = 7e-048
Identities = 28/61 (45%), Positives = 44/61 (72%)
Frame = -1 / -3
Query: 810 LRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAKR 631
LR +I +L NR+L+GD++ LSLKEL LE+R+++GI +R+RK E+L E+ + +R
Sbjct: 212 LRQEIDILTKVNRNLMGDNLSALSLKELDLLEARIQRGIQSVRSRKDEILHQELEALRER 33
Query: 630 E 628
E
Sbjct: 32 E 30
>gb|CO161575.1|CO161575 FLD1_29_F09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_29_F09_A029 5', mRNA sequence
Length = 909
Score = 142 bits (304), Expect(2) = 4e-047
Identities = 58/71 (81%), Positives = 66/71 (92%)
Frame = -1 / +1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG+IEIKRIEN T+RQVTF KRRNGLLKKAYELSVLCDAEVA+I+FS+RG+LYE+AN
Sbjct: 190 MGRGKIEIKRIENTTNRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSNRGKLYEFANK 369
Query: 924 SVKATVERYKK 892
SV T+ERYKK
Sbjct: 370 SVNRTIERYKK 402
Score = 67.5 bits (141), Expect(2) = 4e-047
Identities = 27/75 (36%), Positives = 49/75 (65%)
Frame = -1 / +1
Query: 810 LRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAKR 631
LR +I +L NR+L+GD++ LSLKEL LE+R+++GI +R+RK ++L + ++ +
Sbjct: 460 LRQEIDILTKVNRNLMGDNLSALSLKELDLLEARIQRGIQSVRSRKEQILLVQNDFLRNK 639
Query: 630 ETELQNDHMTLRTKI 586
E Q ++ ++ I
Sbjct: 640 IAECQCENASVTLHI 684
>gb|CO161503.1|CO161503 FLD1_29_F09.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_29_F09_A029 3', mRNA sequence
Length = 896
Score = 142 bits (304), Expect(2) = 4e-047
Identities = 58/71 (81%), Positives = 66/71 (92%)
Frame = -1 / +1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG+IEIKRIEN T+RQVTF KRRNGLLKKAYELSVLCDAEVA+I+FS+RG+LYE+AN
Sbjct: 187 MGRGKIEIKRIENTTNRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSNRGKLYEFANK 366
Query: 924 SVKATVERYKK 892
SV T+ERYKK
Sbjct: 367 SVNRTIERYKK 399
Score = 67.5 bits (141), Expect(2) = 4e-047
Identities = 27/75 (36%), Positives = 49/75 (65%)
Frame = -1 / +1
Query: 810 LRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAKR 631
LR +I +L NR+L+GD++ LSLKEL LE+R+++GI +R+RK ++L + ++ +
Sbjct: 457 LRQEIDILTKVNRNLMGDNLSALSLKELDLLEARIQRGIQSVRSRKEQILLVQNDFLRNK 636
Query: 630 ETELQNDHMTLRTKI 586
E Q ++ ++ I
Sbjct: 637 IAECQCENASVTLHI 681
>gb|CO364847.1|CO364847 RTK1_22_D10.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_22_D10_A029 3', mRNA sequence
Length = 867
Score = 122 bits (260), Expect(2) = 4e-047
Identities = 50/69 (72%), Positives = 59/69 (85%)
Frame = -1 / -2
Query: 1128 EQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRG 949
E GI+ MGRG+IEIK+IEN+ RQVTFCKRR GL+KKAYELSVLCDA+VALIVFSSRG
Sbjct: 671 ETLGILLKMGRGKIEIKKIENSVHRQVTFCKRRGGLMKKAYELSVLCDADVALIVFSSRG 492
Query: 948 RLYEYANNS 922
+LYE ++
Sbjct: 491 KLYELGTSN 465
Score = 87.7 bits (185), Expect(2) = 4e-047
Identities = 37/83 (44%), Positives = 61/83 (73%)
Frame = -1 / -2
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
+QE L+ QI L+ TNR+L+G+ +G++S +EL QLESRL++GI+++RA+K EL+ EI
Sbjct: 359 KQEINLLKQQIDQLKLTNRYLMGEGLGSVSFEELNQLESRLQRGINQVRAKKHELMLDEI 180
Query: 648 SYMAKRETELQNDHMTLRTKIEE 580
+ +E L+ ++M L+ K+EE
Sbjct: 179 RALQSKEHTLRINNMMLQEKLEE 111
>gb|CV031753.1|CV031753 RTNACL1_3_B05.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_3_B05_A029 5', mRNA sequence
Length = 851
Score = 122 bits (260), Expect(2) = 4e-047
Identities = 50/69 (72%), Positives = 59/69 (85%)
Frame = -1 / +2
Query: 1128 EQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRG 949
E GI+ MGRG+IEIK+IEN+ RQVTFCKRR GL+KKAYELSVLCDA+VALIVFSSRG
Sbjct: 155 ETLGILLKMGRGKIEIKKIENSVHRQVTFCKRRGGLMKKAYELSVLCDADVALIVFSSRG 334
Query: 948 RLYEYANNS 922
+LYE ++
Sbjct: 335 KLYELGTSN 361
Score = 87.7 bits (185), Expect(2) = 4e-047
Identities = 37/83 (44%), Positives = 61/83 (73%)
Frame = -1 / +2
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
+QE L+ QI L+ TNR+L+G+ +G++S +EL QLESRL++GI+++RA+K EL+ EI
Sbjct: 467 KQEINLLKQQIDQLKLTNRYLMGEGLGSVSFEELNQLESRLQRGINQVRAKKHELMLDEI 646
Query: 648 SYMAKRETELQNDHMTLRTKIEE 580
+ +E L+ ++M L+ K+EE
Sbjct: 647 RALQSKEHTLRINNMMLQEKLEE 715
>gb|CF389963.1|CF389963 RTDR2_11_B08.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_11_B08_A021 5', mRNA
sequence
Length = 791
Score = 142 bits (304), Expect(2) = 4e-047
Identities = 58/71 (81%), Positives = 66/71 (92%)
Frame = -1 / -1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG+IEIKRIEN T+RQVTF KRRNGLLKKAYELSVLCDAEVA+I+FS+RG+LYE+AN
Sbjct: 779 MGRGKIEIKRIENTTNRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSNRGKLYEFANK 600
Query: 924 SVKATVERYKK 892
SV T+ERYKK
Sbjct: 599 SVNRTIERYKK 567
Score = 67.5 bits (141), Expect(2) = 4e-047
Identities = 27/75 (36%), Positives = 49/75 (65%)
Frame = -1 / -1
Query: 810 LRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAKR 631
LR +I +L NR+L+GD++ LSLKEL LE+R+++GI +R+RK ++L + ++ +
Sbjct: 509 LRQEIDILTKVNRNLMGDNLSALSLKELDLLEARIQRGIQSVRSRKEQILLVQNDFLRNK 330
Query: 630 ETELQNDHMTLRTKI 586
E Q ++ ++ I
Sbjct: 329 IAECQCENASVTPHI 285
>gb|CF389852.1|CF389852 RTDR2_11_B08.b1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_11_B08_A021 3', mRNA
sequence
Length = 685
Score = 142 bits (304), Expect(2) = 7e-047
Identities = 58/71 (81%), Positives = 66/71 (92%)
Frame = -1 / -1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG+IEIKRIEN T+RQVTF KRRNGLLKKAYELSVLCDAEVA+I+FS+RG+LYE+AN
Sbjct: 496 MGRGKIEIKRIENTTNRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSNRGKLYEFANK 317
Query: 924 SVKATVERYKK 892
SV T+ERYKK
Sbjct: 316 SVNRTIERYKK 284
Score = 66.6 bits (139), Expect(2) = 7e-047
Identities = 26/65 (40%), Positives = 44/65 (67%)
Frame = -1 / -1
Query: 810 LRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAKR 631
LR +I +L NR+L+GD++ LSLKEL LE+R+++GI +R+RK ++L + ++ +
Sbjct: 226 LRQEIDILTKVNRNLMGDNLSALSLKELDLLEARIQRGIQSVRSRKEQILLVQNDFLRNK 47
Query: 630 ETELQ 616
E Q
Sbjct: 46 IAECQ 32
>gb|CO201105.1|CO201105 RTCNT2_3_D12.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_3_D12_A029 5', mRNA sequence
Length = 758
Score = 122 bits (260), Expect(2) = 1e-046
Identities = 50/69 (72%), Positives = 59/69 (85%)
Frame = -1 / +1
Query: 1128 EQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRG 949
E GI+ MGRG+IEIK+IEN+ RQVTFCKRR GL+KKAYELSVLCDA+VALIVFSSRG
Sbjct: 169 ETLGILLKMGRGKIEIKKIENSVHRQVTFCKRRGGLMKKAYELSVLCDADVALIVFSSRG 348
Query: 948 RLYEYANNS 922
+LYE ++
Sbjct: 349 KLYELGTSN 375
Score = 85.8 bits (181), Expect(2) = 1e-046
Identities = 36/83 (43%), Positives = 61/83 (73%)
Frame = -1 / +1
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
+QE L+ QI L+ TNR+L+G+ +G++S +EL QLESRL++GI+++RA+K EL+ EI
Sbjct: 481 KQEINLLKQQIDQLKLTNRYLMGEGLGSVSFEELTQLESRLQRGINQVRAKKHELMLDEI 660
Query: 648 SYMAKRETELQNDHMTLRTKIEE 580
+ +E L+ ++M L+ ++EE
Sbjct: 661 RALQSKEHTLRINNMMLQERLEE 729
>gb|CF388137.1|CF388137 RTDR2_1_D05.b1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_1_D05_A021 3', mRNA sequence
Length = 532
Score = 142 bits (304), Expect(2) = 2e-046
Identities = 58/71 (81%), Positives = 66/71 (92%)
Frame = -1 / -1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG+IEIKRIEN T+RQVTF KRRNGLLKKAYELSVLCDAEVA+I+FS+RG+LYE+AN
Sbjct: 433 MGRGKIEIKRIENTTNRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSNRGKLYEFANK 254
Query: 924 SVKATVERYKK 892
SV T+ERYKK
Sbjct: 253 SVNRTIERYKK 221
Score = 65.2 bits (136), Expect(2) = 2e-046
Identities = 26/54 (48%), Positives = 40/54 (74%)
Frame = -1 / -1
Query: 810 LRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
LR +I +L NR+L+GD++ LSLKEL LE+R+++GI +R+RK E+L E+
Sbjct: 163 LRQEIDILTKVNRNLMGDNLSALSLKELDLLEARIQRGIQSVRSRKDEILHQEL 2
>gb|DR109660.1|DR109660 RTS1_3_G12.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_3_G12_A029 5', mRNA sequence
Length = 826
Score = 114 bits (244), Expect(2) = 5e-045
Identities = 47/56 (83%), Positives = 53/56 (94%)
Frame = -1 / +3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE 937
MGRG+IEIK+IEN+ RQVTFCKRR GL+KKA+ELSVLCDAEVALIVFSSRG+LYE
Sbjct: 186 MGRGKIEIKKIENSVHRQVTFCKRRGGLMKKAHELSVLCDAEVALIVFSSRGKLYE 353
Score = 87.7 bits (185), Expect(2) = 5e-045
Identities = 37/83 (44%), Positives = 61/83 (73%)
Frame = -1 / +3
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
+QE L+ QI L+ TNR+L+G+ +G++S +EL QLESRL++GI+++RA+K EL+ EI
Sbjct: 474 KQEINLLKQQIDQLKLTNRYLMGEGLGSVSFEELNQLESRLQRGINQVRAKKHELMLDEI 653
Query: 648 SYMAKRETELQNDHMTLRTKIEE 580
+ +E L+ ++M L+ K+EE
Sbjct: 654 RALQSKEHTLRINNMMLQEKLEE 722
>gb|DR060889.1|DR060889 RTNIT1_30_D12.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_30_D12_A029 5', mRNA sequence
Length = 796
Score = 124 bits (266), Expect(2) = 2e-044
Identities = 52/69 (75%), Positives = 62/69 (89%)
Frame = -1 / +3
Query: 1098 RGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 919
RG+ ++KRIEN TSRQVTF KRRNGLLKKAYELSVLCDAEVAL+VFS RG+LYE+AN S+
Sbjct: 54 RGKTQMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVALMVFSPRGKLYEFANPSM 233
Query: 918 KATVERYKK 892
+ +ERY+K
Sbjct: 234 QKMLERYEK 260
Score = 75.8 bits (159), Expect(2) = 2e-044
Identities = 29/81 (35%), Positives = 55/81 (67%)
Frame = -1 / +3
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
++E A + +I++L+ T R ++G+ + + +LK+L QLES++E+G+ IRARKSE+L +I
Sbjct: 318 KREIANMEERIEILERTQRKMLGEELASCALKDLNQLESQVERGLRNIRARKSEILVTQI 497
Query: 648 SYMAKRETELQNDHMTLRTKI 586
+ ++E ++ LR +I
Sbjct: 498 EQLQRKERMFSEENNFLRKRI 560
>gb|CX645252.1|CX645252 COLD1_1_H11.b1_A029 Root cold Pinus taeda cDNA clone COLD1_1_H11_A029
3', mRNA sequence
Length = 793
Score = 114 bits (244), Expect(2) = 2e-044
Identities = 47/56 (83%), Positives = 53/56 (94%)
Frame = -1 / -3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE 937
MGRG+IEIK+IEN+ RQVTFCKRR GL+KKA+ELSVLCDAEVALIVFSSRG+LYE
Sbjct: 614 MGRGKIEIKKIENSVHRQVTFCKRRGGLMKKAHELSVLCDAEVALIVFSSRGKLYE 447
Score = 85.8 bits (181), Expect(2) = 2e-044
Identities = 36/83 (43%), Positives = 61/83 (73%)
Frame = -1 / -3
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
+QE L+ QI L+ TNR+L+G+ +G++S +EL QLESRL++GI+++RA+K EL+ EI
Sbjct: 329 KQEINLLKQQIDQLKLTNRYLMGEGLGSVSFEELTQLESRLQRGINQVRAKKHELMLDEI 150
Query: 648 SYMAKRETELQNDHMTLRTKIEE 580
+ +E L+ ++M L+ ++EE
Sbjct: 149 RALQSKEHTLRINNMMLQERLEE 81
>gb|CO364965.1|CO364965 RTK1_22_G09.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_22_G09_A029 5', mRNA sequence
Length = 833
Score = 124 bits (266), Expect(2) = 3e-044
Identities = 52/71 (73%), Positives = 62/71 (87%)
Frame = -1 / +3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
M RG+ ++KRIEN TSRQVTF KRRNGLLKKAYELSVLCDAEV LIVFS RG+LYE+ ++
Sbjct: 177 MVRGKTQMKRIENTTSRQVTFSKRRNGLLKKAYELSVLCDAEVGLIVFSPRGKLYEFGSS 356
Query: 924 SVKATVERYKK 892
S++ VERY+K
Sbjct: 357 SMQKIVERYQK 389
Score = 75.3 bits (158), Expect(2) = 3e-044
Identities = 31/86 (36%), Positives = 56/86 (65%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q ++E A + I++L++T R ++G+ + + S+KEL LES+ E+G+S IR+R++E+L
Sbjct: 438 QSLKREIANMEETIRLLESTQRKMLGEGLASCSVKELNNLESQAERGLSHIRSRRTEILK 617
Query: 657 AEISYMAKRETELQNDHMTLRTKIEE 580
+I + K+E L ++ LR K E
Sbjct: 618 NQIDQLKKKERVLSEENAFLRKKCAE 695
>gb|DR178004.1|DR178004 RTMNUT1_8_E05.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_8_E05_A029 5', mRNA sequence
Length = 779
Score = 122 bits (260), Expect(2) = 3e-044
Identities = 50/69 (72%), Positives = 59/69 (85%)
Frame = -1 / +1
Query: 1128 EQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRG 949
E GI+ MGRG+IEIK+IEN+ RQVTFCKRR GL+KKAYELSVLCDA+VALIVFSSRG
Sbjct: 241 ETLGILLKMGRGKIEIKKIENSVHRQVTFCKRRGGLMKKAYELSVLCDADVALIVFSSRG 420
Query: 948 RLYEYANNS 922
+LYE ++
Sbjct: 421 KLYELGTSN 447
Score = 78.0 bits (164), Expect(2) = 3e-044
Identities = 33/75 (44%), Positives = 55/75 (73%)
Frame = -1 / +1
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
+QE L+ QI L+ TNR+L+G+ +G++S +EL QLESRL++GI+++RA+K EL+ EI
Sbjct: 553 KQEINLLKQQIDQLKLTNRYLMGEGLGSVSFEELTQLESRLQRGINQVRAKKHELMLDEI 732
Query: 648 SYMAKRETELQNDHM 604
+ +E L+ ++M
Sbjct: 733 RALQSKEHTLRINNM 777
>gb|DR090702.1|DR090702 RTAL1_16_G11.g1_A029 Roots plus added aluminum Pinus taeda cDNA clone
RTAL1_16_G11_A029 5', mRNA sequence
Length = 808
Score = 124 bits (266), Expect(2) = 1e-043
Identities = 52/71 (73%), Positives = 62/71 (87%)
Frame = -1 / +3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
M RG+ ++KRIEN TSRQVTF KRRNGLLKKAYELSVLCDAEV LIVFS RG+LYE+ ++
Sbjct: 249 MVRGKTQMKRIENTTSRQVTFSKRRNGLLKKAYELSVLCDAEVGLIVFSPRGKLYEFGSS 428
Query: 924 SVKATVERYKK 892
S++ VERY+K
Sbjct: 429 SMQKIVERYQK 461
Score = 73.0 bits (153), Expect(2) = 1e-043
Identities = 29/84 (34%), Positives = 55/84 (65%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q ++E A + I++L++T R ++G+ + + S+KEL LES+ E+G+S IR+R++E+L
Sbjct: 510 QSLKREIANMEETIRLLESTQRKMLGEGLASCSVKELNNLESQAERGLSHIRSRRTEILK 689
Query: 657 AEISYMAKRETELQNDHMTLRTKI 586
+I + K+E L ++ LR +
Sbjct: 690 NQIDQLKKKERVLSEENAFLRKNV 761
>gb|AW010398.1|AW010398 ST06D02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST06D02, mRNA sequence
Length = 647
Score = 132 bits (283), Expect(2) = 2e-043
Identities = 52/72 (72%), Positives = 67/72 (93%)
Frame = -1 / +3
Query: 1107 SMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 928
+MGRGR++++RIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+A+
Sbjct: 21 AMGRGRVQLRRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFAS 200
Query: 927 NSVKATVERYKK 892
+S+ T+ERY+K
Sbjct: 201 SSMNKTLERYEK 236
Score = 64.8 bits (135), Expect(2) = 2e-043
Identities = 24/70 (34%), Positives = 49/70 (70%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q + QE KL+ ++++LQ + RHL+G+ +G L++KEL++LE +LE ++ +++RK+ ++
Sbjct: 285 QNWHQEVTKLKGKVELLQRSQRHLLGEDLGPLNVKELQRLERQLEGALTHLKSRKTXVML 464
Query: 657 AEISYMAKRE 628
I + + E
Sbjct: 465 DXIEELXQXE 494
>gb|BQ290846.1|BQ290846 NXRV050_D03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV050_D03 5' similar to Arabidopsis thaliana
sequence At5g15800 transcription factor (AGL2) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 546
Score = 132 bits (283), Expect(2) = 2e-043
Identities = 52/72 (72%), Positives = 67/72 (93%)
Frame = -1 / +1
Query: 1107 SMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 928
+MGRGR++++RIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+A+
Sbjct: 82 AMGRGRVQLRRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFAS 261
Query: 927 NSVKATVERYKK 892
+S+ T+ERY+K
Sbjct: 262 SSMNKTLERYEK 297
Score = 64.8 bits (135), Expect(2) = 2e-043
Identities = 24/56 (42%), Positives = 43/56 (76%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKS 670
Q + QE KL+ ++++LQ + RHL+G+ +G L++KEL+QLE +LE ++ +R+RK+
Sbjct: 346 QNWHQEVTKLKGKVELLQRSQRHLLGEDLGPLNVKELQQLERQLEVALTHLRSRKT 513
>gb|CO200411.1|CO200411 GEO2_7_G03.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_7_G03_A032 3', mRNA sequence
Length = 860
Score = 122 bits (260), Expect(3) = 2e-043
Identities = 50/69 (72%), Positives = 59/69 (85%)
Frame = -1 / +2
Query: 1128 EQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRG 949
E GI+ MGRG+IEIK+IEN+ RQVTFCKRR GL+KKAYELSVLCDA+VALIVFSSRG
Sbjct: 140 ETLGILLKMGRGKIEIKKIENSVHRQVTFCKRRGGLMKKAYELSVLCDADVALIVFSSRG 319
Query: 948 RLYEYANNS 922
+LYE ++
Sbjct: 320 KLYELGTSN 346
Score = 70.7 bits (148), Expect(3) = 2e-043
Identities = 28/65 (43%), Positives = 50/65 (76%)
Frame = -1 / +3
Query: 774 RHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAKRETELQNDHMTLR 595
R+L+G+ +G++S +EL QLESRL++GI+++RA+K EL+ EI + +E L+ ++M L+
Sbjct: 441 RYLMGEGLGSVSFEELTQLESRLQRGINQVRAKKHELMLDEIRALQSKEHTLRINNMMLQ 620
Query: 594 TKIEE 580
++EE
Sbjct: 621 ERLEE 635
Score = 22.6 bits (43), Expect(3) = 2e-043
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = -1 / +2
Query: 930 NNSVKATVERYKK 892
NNS+++ +ERY+K
Sbjct: 353 NNSMRSILERYQK 391
>gb|CF670172.1|CF670172 RTCNT1_48_B11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_48_B11_A029 5', mRNA sequence
Length = 788
Score = 111 bits (237), Expect(2) = 4e-043
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = -1 / +2
Query: 1113 VASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 934
+ MGRG+I+IK+IEN+ RQVTFCKRR GL+KKAYELSVLCDAEVALIVFS G+LYE
Sbjct: 35 LCKMGRGKIQIKKIENSVHRQVTFCKRRGGLMKKAYELSVLCDAEVALIVFSGGGKLYEL 214
Query: 933 ANNS 922
++
Sbjct: 215 GTSN 226
Score = 84.5 bits (178), Expect(2) = 4e-043
Identities = 36/83 (43%), Positives = 60/83 (72%)
Frame = -1 / +2
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
+QE L+ QI L+ TNR+L+G +G++S +EL QLESRL++GI+++RA+K EL+ EI
Sbjct: 329 KQEINLLKQQIDQLKLTNRYLMGKGLGSVSFEELTQLESRLQRGINQVRAKKHELMLDEI 508
Query: 648 SYMAKRETELQNDHMTLRTKIEE 580
+ +E L+ ++M L+ ++EE
Sbjct: 509 RALQSKEHTLRINNMMLQERLEE 577
>gb|U90344.1|PRU90344 Pinus radiata putative MADS box transcription factor PrMADS9 mRNA,
complete cds
Length = 1038
Score = 124 bits (265), Expect(2) = 6e-043
Identities = 51/71 (71%), Positives = 63/71 (88%)
Frame = -1 / +2
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
M RG+ ++KRIEN+TSRQVTF KRRNGLLKKAYELSVLCDAEV LI+FS RG+LYE+A+
Sbjct: 119 MVRGKTQMKRIENDTSRQVTFSKRRNGLLKKAYELSVLCDAEVGLIIFSPRGKLYEFASP 298
Query: 924 SVKATVERYKK 892
S++ +E+YKK
Sbjct: 299 SMEEILEKYKK 331
Score = 71.2 bits (149), Expect(2) = 6e-043
Identities = 29/80 (36%), Positives = 54/80 (67%)
Frame = -1 / +2
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
+Q+ A + QI++L++T R ++G+ + + S+ EL +LES+ E+G+S IRARK+E+L +I
Sbjct: 398 KQKLANMEEQIRILESTQRKMLGEGLESCSMAELNKLESQAERGLSHIRARKTEILVDQI 577
Query: 648 SYMAKRETELQNDHMTLRTK 589
+ ++E L ++ L K
Sbjct: 578 ECLKRKERLLSEENALLSRK 637
>gb|DR384822.1|DR384822 RTHG1_4_G03.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_4_G03_A029 5', mRNA sequence
Length = 668
Score = 124 bits (265), Expect(2) = 6e-043
Identities = 51/71 (71%), Positives = 63/71 (88%)
Frame = -1 / +2
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
M RG+ ++KRIEN+TSRQVTF KRRNGLLKKAYELSVLCDAEV LI+FS RG+LYE+A+
Sbjct: 119 MVRGKTQMKRIENDTSRQVTFSKRRNGLLKKAYELSVLCDAEVGLIIFSPRGKLYEFASP 298
Query: 924 SVKATVERYKK 892
S++ +E+YKK
Sbjct: 299 SMEEILEKYKK 331
Score = 71.2 bits (149), Expect(2) = 6e-043
Identities = 29/80 (36%), Positives = 54/80 (67%)
Frame = -1 / +2
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
+Q+ A + QI++L++T R ++G+ + + S+ EL +LES+ E+G+S IRARK+E+L +I
Sbjct: 398 KQKLANMEEQIRILESTQRKMLGEGLESCSMTELNKLESQAERGLSHIRARKTEILVDQI 577
Query: 648 SYMAKRETELQNDHMTLRTK 589
+ ++E L ++ L K
Sbjct: 578 ECLKRKERLLSEENALLSRK 637
>gb|CF394057.1|CF394057 RTDS2_3_D04.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_3_D04_A021 3', mRNA sequence
Length = 611
Score = 118 bits (252), Expect(3) = 1e-042
Identities = 49/69 (71%), Positives = 58/69 (84%)
Frame = -1 / -3
Query: 1128 EQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRG 949
E I+ MGRG+IEIK+IEN+ RQVTFCKRR GL+KKAYELSVLCDA+VALIVFSSRG
Sbjct: 501 ETLRILLKMGRGKIEIKKIENSVHRQVTFCKRRGGLMKKAYELSVLCDADVALIVFSSRG 322
Query: 948 RLYEYANNS 922
+LYE ++
Sbjct: 321 KLYELGTSN 295
Score = 71.6 bits (150), Expect(3) = 1e-042
Identities = 30/60 (50%), Positives = 46/60 (76%)
Frame = -1 / -3
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
+QE L+ QI L+ TNR+L+G+ +G++S +EL QLESRL +GI+++RA+K EL+ EI
Sbjct: 192 KQEINLLKQQIDQLKLTNRYLMGEGLGSVSFEELTQLESRLXRGINQVRAKKHELMLDEI 13
Score = 22.6 bits (43), Expect(3) = 1e-042
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = -1 / -3
Query: 930 NNSVKATVERYKK 892
NNS+++ +ERY+K
Sbjct: 288 NNSMRSILERYQK 250
>gb|CF475501.1|CF475501 RTWW2_12_G12.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_12_G12_A021 5', mRNA sequence
Length = 779
Score = 124 bits (265), Expect(2) = 2e-042
Identities = 51/71 (71%), Positives = 63/71 (88%)
Frame = -1 / +2
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
M RG+ ++KRIEN+TSRQVTF KRRNGLLKKAYELSVLCDAEV LI+FS RG+LYE+A+
Sbjct: 68 MVRGKTQMKRIENDTSRQVTFSKRRNGLLKKAYELSVLCDAEVGLIIFSPRGKLYEFASP 247
Query: 924 SVKATVERYKK 892
S++ +E+YKK
Sbjct: 248 SMEEILEKYKK 280
Score = 69.8 bits (146), Expect(2) = 2e-042
Identities = 28/80 (35%), Positives = 54/80 (67%)
Frame = -1 / +2
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
+++ A + QI++L++T R ++G+ + + S+ EL +LES+ E+G+S IRARK+E+L +I
Sbjct: 347 KEKLANMEEQIRILESTQRKMLGEGLESCSMTELNKLESQAERGLSHIRARKTEILVDQI 526
Query: 648 SYMAKRETELQNDHMTLRTK 589
+ ++E L ++ L K
Sbjct: 527 ECLKRKERLLSEENALLSRK 586
>gb|CV033324.1|CV033324 RTNACL1_33_G03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_33_G03_A029 5', mRNA sequence
Length = 796
Score = 120 bits (256), Expect(2) = 3e-042
Identities = 50/71 (70%), Positives = 62/71 (87%)
Frame = -1 / +1
Query: 1107 SMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 928
+MGR RIE++RI+N ++R+VTF RRNGLLKKAYELSVLCDAEVA+IVFSSRG+LY + +
Sbjct: 166 TMGRRRIELRRIDNASTRRVTFSTRRNGLLKKAYELSVLCDAEVAVIVFSSRGKLYGFGS 345
Query: 927 NSVKATVERYK 895
SV T+ERYK
Sbjct: 346 KSVCRTIERYK 378
Score = 73.0 bits (153), Expect(2) = 3e-042
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = -1 / +1
Query: 813 KLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAK 634
KL+ +I +L N +R L+GDS+ +LS+KEL +LE RLE+GI IR +K + E K
Sbjct: 454 KLKKEIDILTNKSRKLMGDSISSLSMKELDELELRLERGIDCIRLQKDRIFVQENQTAKK 633
Query: 633 RETELQNDHMTLRTKIEEGEQQLQQVT 553
E L ++ LRTKI +++ + T
Sbjct: 634 LEEALIVENQFLRTKIGRYQKERSKNT 714
>gb|DR079072.1|DR079072 RTFEPL1_8_G11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_8_G11_A029 5', mRNA sequence
Length = 829
Score = 124 bits (266), Expect(2) = 4e-042
Identities = 52/71 (73%), Positives = 62/71 (87%)
Frame = -1 / +2
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
M RG+ ++KRIEN TSRQVTF KRRNGLLKKAYELSVLCDAEV LIVFS RG+LYE+ ++
Sbjct: 146 MVRGKTQMKRIENTTSRQVTFSKRRNGLLKKAYELSVLCDAEVGLIVFSPRGKLYEFGSS 325
Query: 924 SVKATVERYKK 892
S++ VERY+K
Sbjct: 326 SMQKIVERYQK 358
Score = 68.0 bits (142), Expect(2) = 4e-042
Identities = 28/79 (35%), Positives = 49/79 (62%)
Frame = -1 / +2
Query: 816 AKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMA 637
A + I L++T R ++G+ + + S+KEL LES+ E+G+S IR+R++E+ +I +
Sbjct: 428 ANMEETILFLESTQRKMLGEGLASCSVKELNNLESQAERGLSHIRSRRTEIFKNQIDQLK 607
Query: 636 KRETELQNDHMTLRTKIEE 580
K+E L ++ LR K E
Sbjct: 608 KKERMLSEENAFLRKKCAE 664
>gb|CO163263.1|CO163263 FLD1_40_B04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_40_B04_A029 5', mRNA sequence
Length = 841
Score = 124 bits (266), Expect(2) = 1e-041
Identities = 52/71 (73%), Positives = 62/71 (87%)
Frame = -1 / +2
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
M RG+ ++KRIEN TSRQVTF KRRNGLLKKAYELSVLCDAEV LIVFS RG+LYE+ ++
Sbjct: 44 MVRGKTQMKRIENTTSRQVTFSKRRNGLLKKAYELSVLCDAEVGLIVFSPRGKLYEFGSS 223
Query: 924 SVKATVERYKK 892
S++ VERY+K
Sbjct: 224 SMQKIVERYQK 256
Score = 66.1 bits (138), Expect(2) = 1e-041
Identities = 25/70 (35%), Positives = 49/70 (70%)
Frame = -1 / +2
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q ++E A + I++L++T R ++G+ + + S+KEL LES+ E+G+S IR+R++E+L
Sbjct: 305 QSLKREIANMEETIRLLESTQRKMLGEGLASCSVKELNNLESQAERGLSHIRSRRTEILK 484
Query: 657 AEISYMAKRE 628
+I + K++
Sbjct: 485 NQIDQLKKKD 514
>gb|U42399.1|PRU42399 Pinus radiata putative MADS-box family transcription factor (PrMADS1)
mRNA, complete cds
Length = 1007
Score = 118 bits (253), Expect(2) = 2e-041
Identities = 47/61 (77%), Positives = 57/61 (93%)
Frame = -1 / +3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG++E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ ++
Sbjct: 21 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 200
Query: 924 S 922
S
Sbjct: 201 S 203
Score = 71.6 bits (150), Expect(2) = 2e-041
Identities = 29/94 (30%), Positives = 60/94 (63%)
Frame = -1 / +3
Query: 846 NAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSE 667
N Q Q+ +L+ ++++LQ + R+L+G+ +G L+ KEL+QLE +LE + +IR+ K++
Sbjct: 273 NEMQNSYQDYLELKARVEVLQRSQRNLLGEELGPLNSKELEQLEHQLENSLKQIRSAKTQ 452
Query: 666 LLAAEISYMAKRETELQNDHMTLRTKIEEGEQQL 565
+ +++++ +E L + LR K+EE ++
Sbjct: 453 FMFDQLAHLQHKEQMLVEANRELRKKLEESNTRI 554
>gb|CX650850.1|CX650850 COLD1_48_B09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_48_B09_A029 5', mRNA sequence
Length = 814
Score = 111 bits (238), Expect(2) = 1e-040
Identities = 45/71 (63%), Positives = 59/71 (83%)
Frame = -1 / +1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGR +++IE+ TSRQVTF KRRNGLLKKAYELSVLCD E+ LIV S RG+++E+++
Sbjct: 82 MGRGRTRLRKIESATSRQVTFSKRRNGLLKKAYELSVLCDVELGLIVLSPRGKVHEFSST 261
Query: 924 SVKATVERYKK 892
V+ +ERY+K
Sbjct: 262 CVQKMLERYEK 294
Score = 75.8 bits (159), Expect(2) = 1e-040
Identities = 29/81 (35%), Positives = 55/81 (67%)
Frame = -1 / +1
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
++E A + +I++L+ T R ++G+ + + +LK+L QLES++E+G+ IRARKSE+L +I
Sbjct: 352 KREIANMEERIEILERTQRKMLGEELASCALKDLNQLESQVERGLRNIRARKSEILVTQI 531
Query: 648 SYMAKRETELQNDHMTLRTKI 586
+ ++E ++ LR +I
Sbjct: 532 EQLQRKERMFSEENNFLRKRI 594
>gb|U90345.1|PRU90345 Pinus radiata putative MADS box transcription factor PrMADS4 mRNA,
complete cds
Length = 1051
Score = 111 bits (237), Expect(2) = 2e-040
Identities = 44/71 (61%), Positives = 60/71 (84%)
Frame = -1 / +3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGRI +++IE+ TSRQVTF KR+NGLLKKAYELSVLCD E+ LIV S RG+++E+++
Sbjct: 180 MGRGRIRLRKIESATSRQVTFSKRKNGLLKKAYELSVLCDVELGLIVLSPRGKVHEFSST 359
Query: 924 SVKATVERYKK 892
++ +ERY+K
Sbjct: 360 CMQKMLERYEK 392
Score = 75.8 bits (159), Expect(2) = 2e-040
Identities = 29/81 (35%), Positives = 55/81 (67%)
Frame = -1 / +3
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
++E A + +I++L+ T R ++G+ + + +LK+L QLES++E+G+ IRARKSE+L +I
Sbjct: 450 KREIANMEERIEILERTQRKMLGEELASCALKDLNQLESQVERGLRNIRARKSEILVTQI 629
Query: 648 SYMAKRETELQNDHMTLRTKI 586
+ ++E ++ LR +I
Sbjct: 630 EQLQRKERMFSEENNFLRKRI 692
>gb|CO170901.1|CO170901 NDL1_17_E10.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_17_E10_A029 5', mRNA sequence
Length = 699
Score = 110 bits (235), Expect(2) = 2e-040
Identities = 44/71 (61%), Positives = 59/71 (83%)
Frame = -1 / +3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGR +++IE+ TSRQVTF KRRNGLLKKAYELSVLCD E+ LIV S RG+++E+++
Sbjct: 147 MGRGRTRLRKIESATSRQVTFSKRRNGLLKKAYELSVLCDVELGLIVLSPRGKVHEFSST 326
Query: 924 SVKATVERYKK 892
++ +ERY+K
Sbjct: 327 CMQKMLERYEK 359
Score = 76.7 bits (161), Expect(2) = 2e-040
Identities = 31/93 (33%), Positives = 59/93 (63%)
Frame = -1 / +3
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
++E A + +I++L+ T R ++G+ + + +LK+L QLES++E+G+ IRARKSE+L +I
Sbjct: 417 KREIANMEERIEILERTQRKMLGEELASCALKDLNQLESQVERGLRNIRARKSEILVTQI 596
Query: 648 SYMAKRETELQNDHMTLRTKIEEGEQQLQQVTV 550
+ ++E ++ LR +I + L + V
Sbjct: 597 EQLQRKERMFSEENNFLRKRIVDPHSVLTPLQV 695
>gb|DR012819.1|DR012819 HEAT1_15_E08.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_15_E08_A029 3', mRNA sequence
Length = 734
Score = 110 bits (235), Expect(2) = 3e-040
Identities = 44/71 (61%), Positives = 59/71 (83%)
Frame = -1 / -1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGR +++IE+ TSRQVTF KRRNGLLKKAYELSVLCD E+ LIV S RG+++E+++
Sbjct: 695 MGRGRTRLRKIESATSRQVTFSKRRNGLLKKAYELSVLCDVELGLIVLSPRGKVHEFSST 516
Query: 924 SVKATVERYKK 892
++ +ERY+K
Sbjct: 515 CMQKMLERYEK 483
Score = 75.8 bits (159), Expect(2) = 3e-040
Identities = 29/81 (35%), Positives = 55/81 (67%)
Frame = -1 / -1
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
++E A + +I++L+ T R ++G+ + + +LK+L QLES++E+G+ IRARKSE+L +I
Sbjct: 425 KREIANMEERIEILERTQRKMLGEELASCALKDLNQLESQVERGLRNIRARKSEILVTQI 246
Query: 648 SYMAKRETELQNDHMTLRTKI 586
+ ++E ++ LR +I
Sbjct: 245 EQLQRKERMFSEENNFLRKRI 183
>gb|CO363306.1|CO363306 RTK1_8_H10.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_8_H10_A029 5', mRNA sequence
Length = 771
Score = 110 bits (234), Expect(2) = 5e-040
Identities = 46/60 (76%), Positives = 54/60 (90%)
Frame = -1 / +3
Query: 1071 ENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATVERYKK 892
EN TSRQVTF KRRNGLLKKAYELSVLCDAEVAL+VFS RG+LY++AN S++ +ERY+K
Sbjct: 6 ENATSRQVTFSKRRNGLLKKAYELSVLCDAEVALMVFSPRGKLYDFANPSMQKMLERYEK 185
Score = 75.8 bits (159), Expect(2) = 5e-040
Identities = 29/81 (35%), Positives = 55/81 (67%)
Frame = -1 / +3
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
++E A + +I++L+ T R ++G+ + + +LK+L QLES++E+G+ IRARKSE+L +I
Sbjct: 243 KREIANMEERIEILERTQRKMLGEELASCALKDLNQLESQVERGLRNIRARKSEILVTQI 422
Query: 648 SYMAKRETELQNDHMTLRTKI 586
+ ++E ++ LR +I
Sbjct: 423 EQLQRKERMFSEENNFLRKRI 485
>gb|CF388230.1|CF388230 RTDR2_1_D05.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_1_D05_A021 5', mRNA sequence
Length = 751
Score = 108 bits (231), Expect(2) = 5e-040
Identities = 44/54 (81%), Positives = 50/54 (92%)
Frame = -1 / -3
Query: 1053 QVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATVERYKK 892
QVTF KRRNGLLKKAYELSVLCDAEVA+I+FS+RG+LYE+AN SV T+ERYKK
Sbjct: 749 QVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSNRGKLYEFANKSVNRTIERYKK 588
Score = 77.1 bits (162), Expect(2) = 5e-040
Identities = 36/86 (41%), Positives = 55/86 (63%)
Frame = -1 / -3
Query: 810 LRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAKR 631
LR +I +L NR+L+GD++ LSLKEL LE+R+++GI +R+RK E+L E+ + +R
Sbjct: 530 LRQEIDILTKVNRNLMGDNLSALSLKELDLLEARIQRGIQSVRSRKDEILHQELEALRER 351
Query: 630 ETELQNDHMTLRTKIEEGEQQLQQVT 553
E L + LR KI E + + VT
Sbjct: 350 EQILLVQNDFLRNKIAECQCENASVT 273
>gb|DR069454.1|DR069454 RTDK1_7_H04.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_7_H04_A029 3', mRNA sequence
Length = 871
Score = 108 bits (230), Expect(2) = 2e-039
Identities = 43/71 (60%), Positives = 58/71 (81%)
Frame = -1 / +2
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGR +++IE+ TSRQVTF KRRNGLLKKAYE SVLCD E+ LIV S RG+++E+++
Sbjct: 5 MGRGRTRLRKIESATSRQVTFSKRRNGLLKKAYEXSVLCDVELGLIVLSPRGKVHEFSST 184
Query: 924 SVKATVERYKK 892
++ +ERY+K
Sbjct: 185 CMQKMLERYEK 217
Score = 75.8 bits (159), Expect(2) = 2e-039
Identities = 29/81 (35%), Positives = 55/81 (67%)
Frame = -1 / +2
Query: 828 QQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
++E A + +I++L+ T R ++G+ + + +LK+L QLES++E+G+ IRARKSE+L +I
Sbjct: 275 KREIANMEERIEILERTQRKMLGEELASCALKDLNQLESQVERGLRNIRARKSEILVTQI 454
Query: 648 SYMAKRETELQNDHMTLRTKI 586
+ ++E ++ LR +I
Sbjct: 455 EQLQRKERMFSEENNFLRKRI 517
>gb|CF665739.1|CF665739 RTCNT1_18_D05.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_18_D05_A029 3', mRNA sequence
Length = 665
Score = 120 bits (257), Expect(2) = 2e-039
Identities = 47/71 (66%), Positives = 64/71 (90%)
Frame = -1 / -1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGR+++++IEN +RQVTF KRRNGL KKA ELS+LCDAEVALIVFS+RG+LYE+A++
Sbjct: 491 MGRGRVQLRKIENKINRQVTFSKRRNGLKKKAAELSILCDAEVALIVFSNRGKLYEFASS 312
Query: 924 SVKATVERYKK 892
S++ ++RY+K
Sbjct: 311 SMEKILQRYRK 279
Score = 63.4 bits (132), Expect(2) = 2e-039
Identities = 25/75 (33%), Positives = 49/75 (65%)
Frame = -1 / -2
Query: 822 ESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEISY 643
E +L+ + + LQ NRHL+G+ V L++KEL+QLE +L+ G+ ++ + K++ + I
Sbjct: 226 EFTQLKEKFESLQRCNRHLLGEDVDGLTMKELQQLEQQLQGGLHQVISXKNQFMFDMIEE 47
Query: 642 MAKRETELQNDHMTL 598
+ K+E L+ ++ +L
Sbjct: 46 LQKKEQLLEGENKSL 2
>gb|CO200495.1|CO200495 GEO2_7_G03.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_7_G03_A032 5', mRNA sequence
Length = 820
Score = 122 bits (260), Expect(3) = 3e-039
Identities = 50/69 (72%), Positives = 59/69 (85%)
Frame = -1 / +2
Query: 1128 EQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRG 949
E GI+ MGRG+IEIK+IEN+ RQVTFCKRR GL+KKAYELSVLCDA+VALIVFSSRG
Sbjct: 383 ETLGILLKMGRGKIEIKKIENSVHRQVTFCKRRGGLMKKAYELSVLCDADVALIVFSSRG 562
Query: 948 RLYEYANNS 922
+LYE ++
Sbjct: 563 KLYELGTSN 589
Score = 56.5 bits (117), Expect(3) = 3e-039
Identities = 22/42 (52%), Positives = 35/42 (83%)
Frame = -1 / +3
Query: 774 RHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEI 649
R+L+G+ +G++S +EL QLESRL +GI+++RA+K EL+ EI
Sbjct: 684 RYLMGEGLGSVSFEELTQLESRLXRGINQVRAKKHELMLDEI 809
Score = 22.6 bits (43), Expect(3) = 3e-039
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = -1 / +2
Query: 930 NNSVKATVERYKK 892
NNS+++ +ERY+K
Sbjct: 596 NNSMRSILERYQK 634
>gb|DR051726.1|DR051726 RTBOR1_32_A11.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_32_A11_A029 3', mRNA sequence
Length = 792
Score = 114 bits (244), Expect(2) = 5e-039
Identities = 47/56 (83%), Positives = 53/56 (94%)
Frame = -1 / -3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE 937
MGRG+IEIK+IEN+ RQVTFCKRR GL+KKA+ELSVLCDAEVALIVFSSRG+LYE
Sbjct: 622 MGRGKIEIKKIENSVHRQVTFCKRRGGLMKKAHELSVLCDAEVALIVFSSRGKLYE 455
Score = 70.7 bits (148), Expect(2) = 5e-039
Identities = 28/65 (43%), Positives = 50/65 (76%)
Frame = -1 / -1
Query: 774 RHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAKRETELQNDHMTLR 595
R+L+G+ +G++S +EL QLESRL++GI+++RA+K EL+ EI + +E L+ ++M L+
Sbjct: 342 RYLMGEGLGSVSFEELTQLESRLQRGINQVRAKKHELMLDEIRALQSKEHTLRINNMMLQ 163
Query: 594 TKIEE 580
++EE
Sbjct: 162 ERLEE 148
>gb|DR051801.1|DR051801 RTBOR1_32_A11.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_32_A11_A029 5', mRNA sequence
Length = 822
Score = 114 bits (244), Expect(2) = 6e-039
Identities = 47/56 (83%), Positives = 53/56 (94%)
Frame = -1 / -3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE 937
MGRG+IEIK+IEN+ RQVTFCKRR GL+KKA+ELSVLCDAEVALIVFSSRG+LYE
Sbjct: 778 MGRGKIEIKKIENSVHRQVTFCKRRGGLMKKAHELSVLCDAEVALIVFSSRGKLYE 611
Score = 70.7 bits (148), Expect(2) = 6e-039
Identities = 28/65 (43%), Positives = 50/65 (76%)
Frame = -1 / -1
Query: 774 RHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAKRETELQNDHMTLR 595
R+L+G+ +G++S +EL QLESRL++GI+++RA+K EL+ EI + +E L+ ++M L+
Sbjct: 498 RYLMGEGLGSVSFEELTQLESRLQRGINQVRAKKHELMLDEIRALQSKEHTLRINNMMLQ 319
Query: 594 TKIEE 580
++EE
Sbjct: 318 ERLEE 304
>gb|DR069761.1|DR069761 RTDK1_9_F10.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_9_F10_A029 3', mRNA sequence
Length = 864
Score = 114 bits (244), Expect(2) = 6e-039
Identities = 49/97 (50%), Positives = 67/97 (69%)
Frame = -1 / -1
Query: 1128 EQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRG 949
+Q + + M R +IEIKRI N +RQVTF KRR GL KKA ELS+LC+A+VAL+VFSS G
Sbjct: 840 QQF*VWSDMAREKIEIKRIANAPARQVTFSKRRRGLFKKAQELSILCEADVALVVFSSTG 661
Query: 948 RLYEYANNSVKATVERYKKAHTVGSSSGPPLLEHNAQ 838
+LY+Y+++S+K +++Y T G P LE Q
Sbjct: 660 KLYDYSSSSMKMILDKYSLYPTTNQKEGQPNLEPETQ 550
Score = 67.5 bits (141), Expect(2) = 6e-039
Identities = 27/83 (32%), Positives = 54/83 (65%)
Frame = -1 / -1
Query: 825 QESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEIS 646
Q+ +++ QI+ + T R++ G+ + LSL EL+QLE +LE G+S +R++K E + EI+
Sbjct: 552 QDIRRIKQQIEEITQTLRNMHGEELEELSLNELQQLEEQLEMGLSHVRSKKGENIVKEIN 373
Query: 645 YMAKRETELQNDHMTLRTKIEEG 577
+ ++ + ++ LR +++EG
Sbjct: 372 ALQQKGIRIIEENTKLRRELKEG 304
>gb|DR177222.1|DR177222 RTMNUT1_3_H10.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_3_H10_A029 5', mRNA sequence
Length = 770
Score = 114 bits (244), Expect(2) = 6e-039
Identities = 48/70 (68%), Positives = 59/70 (84%)
Frame = -1 / +3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
M RG+ ++KRIEN TSRQVT KRRNGLLKKAYELSVLCDAEV LIVFS G+LYE+A+
Sbjct: 180 MVRGKTQMKRIENPTSRQVTLSKRRNGLLKKAYELSVLCDAEVGLIVFSPSGKLYEFAST 359
Query: 924 SVKATVERYK 895
S++ +E+Y+
Sbjct: 360 SMQKLLEKYE 389
Score = 67.5 bits (141), Expect(2) = 6e-039
Identities = 27/83 (32%), Positives = 53/83 (63%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q +QE + ++++LQ+T R + G+ + S+KEL QLE ++E+G++++RA K+++L
Sbjct: 441 QCLKQEIENMEKRVRILQSTQRKMSGEGLALCSIKELNQLEGQVERGLNRVRATKTKVLV 620
Query: 657 AEISYMAKRETELQNDHMTLRTK 589
EI + ++E L+ + L K
Sbjct: 621 DEIEKLKQKEHVLREEKALLHKK 689
>gb|CO169756.1|CO169756 NDL1_9_A05.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_9_A05_A029 5', mRNA sequence
Length = 753
Score = 117 bits (250), Expect(2) = 6e-039
Identities = 48/71 (67%), Positives = 63/71 (88%)
Frame = -1 / +3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
M RG+ +++RIEN TSRQVTF KRRNGLLKKAYELSVLCDAEVALIVFS RG+++E+A+
Sbjct: 273 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVALIVFSPRGKVHEFASP 452
Query: 924 SVKATVERYKK 892
S++ +++Y+K
Sbjct: 453 SMQRVLDKYQK 485
Score = 64.8 bits (135), Expect(2) = 6e-039
Identities = 25/73 (34%), Positives = 49/73 (67%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q + E A++ ++ +L++ R ++G+ + + S+KEL QLES+ E+G+++IRARK+E+L
Sbjct: 534 QHLKGEIAQMEERVNILESAQRKMLGEDLASCSMKELNQLESQAERGLNRIRARKTEILM 713
Query: 657 AEISYMAKRETEL 619
+ + +E L
Sbjct: 714 DQREQLKSKERML 752
>gb|CX645838.1|CX645838 COLD1_5_D01.g1_A029 Root cold Pinus taeda cDNA clone COLD1_5_D01_A029
5', mRNA sequence
Length = 705
Score = 114 bits (244), Expect(2) = 6e-039
Identities = 48/70 (68%), Positives = 59/70 (84%)
Frame = -1 / +2
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
M RG+ ++KRIEN TSRQVT KRRNGLLKKAYELSVLCDAEV LIVFS G+LYE+A+
Sbjct: 167 MVRGKTQMKRIENPTSRQVTLSKRRNGLLKKAYELSVLCDAEVGLIVFSPSGKLYEFAST 346
Query: 924 SVKATVERYK 895
S++ +E+Y+
Sbjct: 347 SMQKLLEKYE 376
Score = 67.5 bits (141), Expect(2) = 6e-039
Identities = 27/83 (32%), Positives = 53/83 (63%)
Frame = -1 / +2
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q +QE + ++++LQ+T R + G+ + S+KEL QLE ++E+G++++RA K+++L
Sbjct: 428 QCLKQEIENMEKRVRILQSTQRKMSGEGLALCSIKELNQLEGQVERGLNRVRATKTKVLV 607
Query: 657 AEISYMAKRETELQNDHMTLRTK 589
EI + ++E L+ + L K
Sbjct: 608 DEIEKLKQKEHVLREEKALLHKK 676
>gb|BX252374.1|BX252374 BX252374 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP063E09 similar to AGAMOUS LIKE MADS BOX
PROTEIN, mRNA sequence
Length = 674
Score = 118 bits (252), Expect(2) = 6e-039
Identities = 49/71 (69%), Positives = 61/71 (85%)
Frame = -1 / +3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
M RG+ ++K+IEN TSRQVTF KRRNGLLKKAYELSVLCDAEV LIVFS RG+LYE+++
Sbjct: 138 MVRGKTQMKKIENVTSRQVTFSKRRNGLLKKAYELSVLCDAEVGLIVFSPRGKLYEFSSR 317
Query: 924 SVKATVERYKK 892
++ +ERY+K
Sbjct: 318 CMQKMLERYQK 350
Score = 63.8 bits (133), Expect(2) = 6e-039
Identities = 28/83 (33%), Positives = 53/83 (63%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q ++E A + +I +L+ T R ++G+ + + S+KEL QLES+ ++G+ IRAR +++L
Sbjct: 399 QDIKRELADKKEKISILELTQRKMLGEDLESCSMKELNQLESQADRGLKHIRARLTKMLV 578
Query: 657 AEISYMAKRETELQNDHMTLRTK 589
EI + +E + +++ LR K
Sbjct: 579 DEIDQLKWKERIVTEENLFLRKK 647
>gb|DR742217.1|DR742217 RTCU1_2_C05.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_2_C05_A029 5', mRNA sequence
Length = 860
Score = 114 bits (243), Expect(2) = 8e-039
Identities = 48/91 (52%), Positives = 64/91 (70%)
Frame = -1 / +1
Query: 1110 ASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 931
+ M R +IEIKRI N +RQVTF KRR GL KKA ELS+LC+A+VAL+VFSS G+LY+Y+
Sbjct: 94 SDMAREKIEIKRIANAPARQVTFSKRRRGLFKKAQELSILCEADVALVVFSSTGKLYDYS 273
Query: 930 NNSVKATVERYKKAHTVGSSSGPPLLEHNAQ 838
++S+K +++Y T G P LE Q
Sbjct: 274 SSSMKMILDKYSLYPTTNQKEGQPNLEPETQ 366
Score = 67.5 bits (141), Expect(2) = 8e-039
Identities = 27/83 (32%), Positives = 54/83 (65%)
Frame = -1 / +1
Query: 825 QESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEIS 646
Q+ +++ QI+ + T R++ G+ + LSL EL+QLE +LE G+S +R++K E + EI+
Sbjct: 364 QDIRRIKQQIEEITQTLRNMHGEELEELSLNELQQLEEQLEMGLSHVRSKKGENIVKEIN 543
Query: 645 YMAKRETELQNDHMTLRTKIEEG 577
+ ++ + ++ LR +++EG
Sbjct: 544 ALQQKGIRIIEENTKLRRELKEG 612
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 633,978,140
Number of Sequences: 355925
Number of extensions: 9650741
Number of successful extensions: 52509
Number of sequences better than 1.0e-020: 183
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 18907287160
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)