TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AF019146.2.1
(1761 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO199449.1|CO199449 GEO2_1_F10.b1_A032 Root gravitropism... 353 e-116
gb|DR070649.1|DR070649 RTDK1_14_F01.g1_A029 Roots, dark Pin... 359 e-112
gb|DR011623.1|DR011623 HEAT1_6_H03.g1_A029 Root at 37 C for... 289 e-102
gb|CO167267.1|CO167267 FLD1_67_H10.g1_A029 Root flooded Pin... 270 e-100
gb|CF668985.1|CF668985 RTCNT1_39_G12.g1_A029 Root control P... 355 e-100
gb|CX716008.1|CX716008 RTPQ1_39_C01.g1_A032 Roots treated w... 361 8e-099
gb|DN462584.1|DN462584 EST958383 Sequencing ESTs from loblo... 257 1e-098
gb|CF398991.1|CF398991 RTDS3_11_H09.g1_A022 Drought-stresse... 359 3e-098
gb|CX650902.1|CX650902 COLD1_48_G09.g1_A029 Root cold Pinus... 306 2e-097
gb|DR012887.1|DR012887 HEAT1_15_D05.g1_A029 Root at 37 C fo... 353 2e-096
gb|CF393744.1|CF393744 RTDS2_1_F11.b1_A021 Drought-stressed... 334 6e-096
gb|DR687672.1|DR687672 EST1077754 Normalized pine embryo li... 332 4e-095
gb|DT634371.1|DT634371 EST1149302 Normalized pine embryo li... 332 1e-094
gb|CF393377.1|CF393377 RTDR3_20_F10.g1_A022 Loblolly pine r... 318 8e-093
gb|DR693562.1|DR693562 EST1083651 Normalized pine embryo li... 174 1e-091
gb|CV031915.1|CV031915 RTNACL1_4_C06.g1_A029 Roots plus add... 316 8e-091
gb|CF392022.1|CF392022 RTDR3_12_H09.g1_A022 Loblolly pine r... 229 3e-090
gb|CO165167.1|CO165167 FLD1_52_G05.g1_A029 Root flooded Pin... 223 2e-088
gb|CF394277.1|CF394277 RTDS2_4_A02.g1_A021 Drought-stressed... 322 5e-087
gb|CF402626.1|CF402626 RTWW1_21_D01.g1_A015 Well-watered lo... 234 8e-086
gb|CF398001.1|CF398001 RTDS3_22_F03.b1_A022 Drought-stresse... 278 7e-085
gb|DT624915.1|DT624915 EST1159190 Sequencing ESTs from lobl... 211 1e-084
gb|CV143704.1|CV143704 EST854913 Sequencing ESTs from loblo... 211 1e-084
gb|CX652206.1|CX652206 COLD1_57_D09.g1_A029 Root cold Pinus... 299 2e-083
gb|DR180554.1|DR180554 RTMNUT1_33_H11.b1_A029 Roots minus m... 284 3e-083
gb|CF668995.1|CF668995 RTCNT1_39_H10.g1_A029 Root control P... 193 2e-079
gb|BX252311.1|BX252311 BX252311 Pinus pinaster differenciat... 190 3e-079
gb|CF385673.1|CF385673 RTDR1_5_B07.g1_A015 Loblolly pine ro... 188 6e-078
gb|CO164051.1|CO164051 FLD1_45_B05.g1_A029 Root flooded Pin... 267 2e-076
gb|CO364426.1|CO364426 RTK1_15_D07.g1_A029 Roots minus pota... 177 2e-074
gb|DR022576.1|DR022576 STRS1_52_B04.b1_A034 Shoot tip pitch... 109 4e-074
gb|CX652372.1|CX652372 COLD1_58_D08.g1_A029 Root cold Pinus... 265 4e-073
gb|CF401560.1|CF401560 RTWW1_13_C07.g1_A015 Well-watered lo... 103 1e-072
gb|CF668432.1|CF668432 RTCNT1_36_A09.g1_A029 Root control P... 170 2e-072
gb|CF671372.1|CF671372 RTCNT1_56_D09.g1_A029 Root control P... 170 2e-072
gb|DR102486.1|DR102486 STRR1_81_B04.g1_A033 Stem Response R... 271 8e-072
gb|CO167863.1|CO167863 FLD1_71_E11.g1_A029 Root flooded Pin... 168 8e-072
gb|DR179208.1|DR179208 RTMNUT1_16_E04.g1_A029 Roots minus m... 111 1e-070
gb|CX714844.1|CX714844 RTPQ1_27_B02.g1_A032 Roots treated w... 163 2e-070
gb|DR019198.1|DR019198 STRS1_28_A04.g1_A034 Shoot tip pitch... 107 6e-070
gb|DR177175.1|DR177175 RTMNUT1_3_C10.g1_A029 Roots minus mi... 160 2e-069
gb|BI643863.1|BI643863 NXPV_123_H11_F NXPV (Nsf Xylem Plani... 262 5e-069
gb|DT626537.1|DT626537 EST1158461 Sequencing ESTs from lobl... 158 9e-069
gb|CV136191.1|CV136191 EST847400 Sequencing ESTs from loblo... 158 9e-069
gb|CF392425.1|CF392425 RTDR3_7_B09.g1_A022 Loblolly pine ro... 221 8e-068
gb|DR110730.1|DR110730 RTS1_12_C12.g1_A029 Roots minus sulf... 94 1e-067
gb|DR743712.1|DR743712 RTCU1_17_E09.g1_A029 Roots plus adde... 154 1e-067
gb|CF402920.1|CF402920 RTWW1_23_E10.g1_A015 Well-watered lo... 152 4e-067
gb|CF390910.1|CF390910 RTDR3_2_D03.g1_A022 Loblolly pine ro... 151 7e-067
gb|DR069530.1|DR069530 RTDK1_7_F12.g1_A029 Roots, dark Pinu... 193 4e-066
gb|CF398437.1|CF398437 RTDS3_12_E06.g1_A022 Drought-stresse... 149 4e-065
gb|DR179132.1|DR179132 RTMNUT1_16_E04.b1_A029 Roots minus m... 111 6e-065
gb|DR071910.1|DR071910 RTDK1_22_G12.g1_A029 Roots, dark Pin... 144 8e-065
gb|DR178895.1|DR178895 RTMNUT1_14_D10.g1_A029 Roots minus m... 139 2e-063
gb|DR094013.1|DR094013 STRR1_11_H02.g1_A033 Stem Response R... 217 3e-063
gb|CF402592.1|CF402592 RTWW1_21_C08.g1_A015 Well-watered lo... 100 3e-063
gb|CF386025.1|CF386025 RTDR1_7_H02.g1_A015 Loblolly pine ro... 100 3e-063
gb|DR069440.1|DR069440 RTDK1_7_F12.b1_A029 Roots, dark Pinu... 122 6e-063
gb|CF391723.1|CF391723 RTDR3_11_H08.g1_A022 Loblolly pine r... 100 1e-062
gb|CV034796.1|CV034796 RTNACL1_11_D10.g1_A029 Roots plus ad... 100 1e-062
gb|DR022645.1|DR022645 STRS1_52_B04.g1_A034 Shoot tip pitch... 109 1e-061
gb|CR393091.1|CR393091 CR393091 RN Pinus pinaster cDNA clon... 123 6e-061
gb|DR014140.1|DR014140 HEAT1_23_D09.g1_A029 Root at 37 C fo... 207 2e-060
gb|DR070631.1|DR070631 RTDK1_14_D03.g1_A029 Roots, dark Pin... 206 3e-060
gb|CO200926.1|CO200926 RTCNT2_2_B04.g1_A029 Root control 2 ... 212 6e-060
gb|CX714408.1|CX714408 RTPQ1_22_A12.b1_A032 Roots treated w... 100 6e-060
gb|CO175004.1|CO175004 NDL1_47_E08.g1_A029 Needles control ... 86 1e-059
gb|CO163181.1|CO163181 FLD1_40_B02.b1_A029 Root flooded Pin... 90 2e-059
gb|CF666059.1|CF666059 RTCNT1_20_A03.g1_A029 Root control P... 210 3e-059
gb|BG040056.1|BG040056 NXSI_106_A01_F NXSI (Nsf Xylem Side ... 213 3e-059
gb|CF664002.1|CF664002 RTCNT1_6_C10.g1_A029 Root control Pi... 170 9e-059
gb|CF394599.1|CF394599 RTDS2_6_A01.g1_A021 Drought-stressed... 86 3e-058
gb|DR059551.1|DR059551 RTNIT1_18_G11.b1_A029 Roots minus ni... 199 4e-058
gb|AW985104.1|AW985104 NXNV_133_A03_F Nsf Xylem Normal wood... 226 4e-058
gb|CF393742.1|CF393742 RTDS2_1_G06.b1_A021 Drought-stressed... 206 5e-058
gb|DR120380.1|DR120380 RTMG1_29_G10.b1_A029 Roots minus mag... 124 2e-057
gb|CO160854.1|CO160854 FLD1_25_C05.b1_A029 Root flooded Pin... 194 8e-057
gb|CO198589.1|CO198589 GEO1_14_H05.g1_A029 Root gravitropis... 220 2e-056
gb|CO165160.1|CO165160 FLD1_52_F08.g1_A029 Root flooded Pin... 199 5e-056
gb|DR094689.1|DR094689 STRR1_16_D07.b1_A033 Stem Response R... 104 6e-055
gb|DR049359.1|DR049359 RTBOR1_15_H04.g1_A029 Roots plus add... 124 1e-054
gb|CO162301.1|CO162301 FLD1_34_A09.g1_A029 Root flooded Pin... 171 4e-054
gb|CO163261.1|CO163261 FLD1_40_B02.g1_A029 Root flooded Pin... 100 4e-054
gb|CO167354.1|CO167354 FLD1_68_A07.g1_A029 Root flooded Pin... 124 8e-054
gb|DN445836.1|DN445836 EST941635 Sequencing ESTs from loblo... 191 1e-053
gb|DN448237.1|DN448237 EST944036 Sequencing ESTs from loblo... 191 1e-053
gb|DR181072.1|DR181072 RTMNUT1_36_D01.g1_A029 Roots minus m... 191 1e-053
gb|CO363972.1|CO363972 RTK1_12_H04.g1_A029 Roots minus pota... 99 5e-053
gb|DR020694.1|DR020694 STRS1_38_E06.g1_A034 Shoot tip pitch... 124 7e-053
gb|CO201395.1|CO201395 RTCNT2_5_B04.g1_A029 Root control 2 ... 208 1e-052
gb|BE431362.1|BE431362 NXNV_181_C06_F Nsf Xylem Normal wood... 193 2e-052
gb|DR387430.1|DR387430 RTHG1_21_E08.g2_A029 Roots plus adde... 168 2e-052
gb|DR097821.1|DR097821 STRR1_37_F05.b1_A033 Stem Response R... 120 6e-052
gb|DR089903.1|DR089903 RTAL1_11_B09.g1_A029 Roots plus adde... 177 1e-051
gb|CV032397.1|CV032397 RTNACL1_7_G06.g2_A029 Roots plus add... 124 2e-051
gb|DR166102.1|DR166102 RTPHOS1_9_A07.g2_A029 Roots minus ph... 200 2e-050
gb|CO160476.1|CO160476 FLD1_21_F06.b1_A029 Root flooded Pin... 199 5e-050
gb|CX651491.1|CX651491 COLD1_52_F07.g1_A029 Root cold Pinus... 113 1e-049
gb|DN459373.1|DN459373 EST955172 Sequencing ESTs from loblo... 152 2e-049
gb|DR178680.1|DR178680 RTMNUT1_13_G02.b1_A029 Roots minus m... 177 2e-049
gb|CV035910.1|CV035910 RTNACL1_43_G04.b1_A029 Roots plus ad... 177 2e-049
gb|BG039980.1|BG039980 NXSI_104_C09_F NXSI (Nsf Xylem Side ... 177 2e-049
gb|BX682795.1|BX682795 BX682795 Pinus pinaster differenciat... 105 4e-049
gb|CO162221.1|CO162221 FLD1_34_A09.b1_A029 Root flooded Pin... 96 6e-049
gb|CO163975.1|CO163975 FLD1_45_B05.b1_A029 Root flooded Pin... 124 6e-049
gb|DR177967.1|DR177967 RTMNUT1_8_A12.g1_A029 Roots minus mi... 174 2e-048
gb|BX682770.1|BX682770 BX682770 Pinus pinaster differenciat... 105 2e-048
gb|CF402904.1|CF402904 RTWW1_23_A07.g1_A015 Well-watered lo... 84 5e-048
gb|DR017640.1|DR017640 STRS1_17_C06.g1_A034 Shoot tip pitch... 124 6e-048
gb|CO363878.1|CO363878 RTK1_12_H04.b1_A029 Roots minus pota... 81 9e-048
gb|DR023743.1|DR023743 STRS1_59_F05.g1_A034 Shoot tip pitch... 190 3e-047
gb|CO167710.1|CO167710 FLD1_70_E03.g1_A029 Root flooded Pin... 169 5e-047
gb|CO366886.1|CO366886 RTK1_30_F07.g1_A029 Roots minus pota... 140 7e-047
gb|CF395195.1|CF395195 RTDS2_10_C06.b1_A021 Drought-stresse... 111 7e-047
gb|DR090763.1|DR090763 RTAL1_17_E09.b1_A029 Roots plus adde... 102 9e-047
gb|CO161815.1|CO161815 FLD1_31_G10.b1_A029 Root flooded Pin... 102 1e-046
gb|DR117786.1|DR117786 RTMG1_9_E04.b1_A029 Roots minus magn... 101 1e-046
gb|CF391061.1|CF391061 RTDR3_3_G05.g1_A022 Loblolly pine ro... 130 6e-046
gb|DR692851.1|DR692851 EST1082939 Normalized pine embryo li... 102 8e-046
gb|BF609538.1|BF609538 NXSI_043_G06_F NXSI (Nsf Xylem Side ... 184 1e-045
gb|BM492188.1|BM492188 NXRV_022_A04_F NXRV (Nsf Xylem Root ... 101 2e-045
gb|DR025478.1|DR025478 STRS1_71_G10.g1_A034 Shoot tip pitch... 104 5e-045
gb|CO160544.1|CO160544 FLD1_21_F06.g1_A029 Root flooded Pin... 124 6e-045
gb|CF385582.1|CF385582 RTDR1_4_D05.g1_A015 Loblolly pine ro... 102 2e-044
gb|CF400442.1|CF400442 RTWW1_5_G06.g1_A015 Well-watered lob... 102 2e-044
gb|CO199661.1|CO199661 GEO2_2_E07.g1_A032 Root gravitropism... 102 2e-044
gb|DR387123.1|DR387123 RTHG1_19_D04.g1_A029 Roots plus adde... 102 2e-044
gb|CF402124.1|CF402124 RTWW1_20_E10.g1_A015 Well-watered lo... 102 2e-044
gb|CF387273.1|CF387273 RTDR1_11_C05.g1_A015 Loblolly pine r... 102 2e-044
gb|DR098447.1|DR098447 STRR1_45_C05.g1_A033 Stem Response R... 102 2e-044
gb|CF477408.1|CF477408 RTWW3_7_H05.g1_A022 Well-watered lob... 102 2e-044
gb|CF666147.1|CF666147 RTCNT1_21_D10.b1_A029 Root control P... 102 3e-044
gb|DR743851.1|DR743851 RTCU1_18_C02.g1_A029 Roots plus adde... 102 3e-044
gb|CF386190.1|CF386190 RTDR1_8_H07.g1_A015 Loblolly pine ro... 102 3e-044
gb|CO159881.1|CO159881 FLD1_16_D07.g1_A029 Root flooded Pin... 102 3e-044
gb|CO167926.1|CO167926 FLD1_72_E01.b1_A029 Root flooded Pin... 102 3e-044
gb|CF472455.1|CF472455 RTDS1_9_H12.g1_A015 Drought-stressed... 116 3e-044
gb|CF400007.1|CF400007 RTWW1_2_H04.g1_A015 Well-watered lob... 102 3e-044
gb|CO162047.1|CO162047 FLD1_32_H06.g1_A029 Root flooded Pin... 102 3e-044
gb|DR164133.1|DR164133 RTFE1_47_B07.b1_A029 Roots minus iro... 102 3e-044
gb|DR018814.1|DR018814 STRS1_25_H01.g1_A034 Shoot tip pitch... 102 3e-044
gb|DR116890.1|DR116890 RTMG1_3_A03.g1_A029 Roots minus magn... 102 3e-044
gb|DR020602.1|DR020602 STRS1_38_C09.b1_A034 Shoot tip pitch... 102 3e-044
gb|CF389090.1|CF389090 RTDR2_13_E01.g1_A021 Loblolly pine r... 100 5e-044
gb|CF666473.1|CF666473 RTCNT1_23_C04.g1_A029 Root control P... 103 6e-044
gb|CX646721.1|CX646721 COLD1_11_C12.b1_A029 Root cold Pinus... 100 1e-043
gb|AW497835.1|AW497835 PC02G12 Pine TriplEx pollen cone lib... 108 1e-043
gb|CF668978.1|CF668978 RTCNT1_39_G05.g1_A029 Root control P... 78 1e-043
gb|CX712619.1|CX712619 RTPQ1_3_D08.g1_A032 Roots treated wi... 124 1e-043
gb|CO164078.1|CO164078 FLD1_45_E01.g1_A029 Root flooded Pin... 100 2e-043
gb|CF399912.1|CF399912 RTWW1_1_H09.g1_A015 Well-watered lob... 102 2e-043
gb|DR059638.1|DR059638 RTNIT1_18_G11.g1_A029 Roots minus ni... 124 3e-043
gb|CF401427.1|CF401427 RTWW1_12_H02.g1_A015 Well-watered lo... 102 3e-043
gb|DR160377.1|DR160377 RTFE1_5_D06.g1_A029 Roots minus iron... 102 4e-043
gb|CO176188.1|CO176188 NDL1_60_H07.b1_A029 Needles control ... 100 5e-043
gb|CF400992.1|CF400992 RTWW1_9_E03.g1_A015 Well-watered lob... 97 8e-043
gb|CF386931.1|CF386931 RTDR1_9_F05.g1_A015 Loblolly pine ro... 102 8e-043
gb|CO161892.1|CO161892 FLD1_31_G10.g1_A029 Root flooded Pin... 97 1e-042
gb|CO200532.1|CO200532 GEO2_8_B04.b1_A032 Root gravitropism... 97 1e-042
gb|DR071907.1|DR071907 RTDK1_22_G09.g1_A029 Roots, dark Pin... 146 2e-042
gb|CF400435.1|CF400435 RTWW1_5_C12.g1_A015 Well-watered lob... 104 2e-042
gb|CF673203.1|CF673203 RTCNT1_76_H06.g1_A029 Root control P... 95 3e-042
gb|CF473877.1|CF473877 RTWW2_19_D05.g1_A021 Well-watered lo... 95 3e-042
gb|CF402590.1|CF402590 RTWW1_21_H03.g1_A015 Well-watered lo... 102 5e-042
gb|CF402022.1|CF402022 RTWW1_16_C02.g1_A015 Well-watered lo... 84 5e-042
gb|CO361817.1|CO361817 NDL2_7_F10.b1_A029 Needles control 2... 95 5e-042
gb|DR081315.1|DR081315 RTFEPL1_28_F11.g1_A029 Roots plus ad... 102 6e-042
gb|DR116570.1|DR116570 RTMG1_1_H02.b1_A029 Roots minus magn... 102 9e-042
gb|DR094715.1|DR094715 STRR1_16_G02.b1_A033 Stem Response R... 93 2e-041
gb|CV035977.1|CV035977 RTNACL1_43_F11.g1_A029 Roots plus ad... 97 3e-041
gb|CX715574.1|CX715574 RTPQ1_35_C04.b1_A032 Roots treated w... 92 4e-041
gb|DR022528.1|DR022528 STRS1_51_E12.g1_A034 Shoot tip pitch... 108 4e-041
gb|CF391882.1|CF391882 RTDR3_10_B12.g1_A022 Loblolly pine r... 100 5e-041
gb|CV034324.1|CV034324 RTNACL1_40_D08.b1_A029 Roots plus ad... 96 5e-041
gb|CO200852.1|CO200852 RTCNT2_2_B04.b1_A029 Root control 2 ... 124 6e-041
gb|DR071830.1|DR071830 RTDK1_22_G12.b1_A029 Roots, dark Pin... 124 6e-041
gb|CF395283.1|CF395283 RTDS2_10_C06.g1_A021 Drought-stresse... 108 1e-040
gb|AW010403.1|AW010403 ST06D07 Pine TriplEx shoot tip libra... 100 1e-040
gb|DR161078.1|DR161078 RTFE1_9_E10.g1_A029 Roots minus iron... 90 1e-040
gb|DR384257.1|DR384257 RTHG1_1_C08.b1_A029 Roots plus added... 90 2e-040
gb|CF479183.1|CF479183 RTWW3_24_G03.g1_A022 Well-watered lo... 97 2e-040
gb|DR117863.1|DR117863 RTMG1_9_E04.g1_A029 Roots minus magn... 108 3e-040
gb|CF400761.1|CF400761 RTWW1_7_G05.g1_A015 Well-watered lob... 102 5e-040
gb|CF385591.1|CF385591 RTDR1_4_A03.g1_A015 Loblolly pine ro... 87 7e-040
gb|CF401012.1|CF401012 RTWW1_9_A07.g1_A015 Well-watered lob... 87 7e-040
gb|CO165085.1|CO165085 FLD1_52_F08.b1_A029 Root flooded Pin... 124 9e-040
gb|DR070580.1|DR070580 RTDK1_14_F01.b1_A029 Roots, dark Pin... 124 9e-040
gb|CX650020.1|CX650020 COLD1_43_B02.b1_A029 Root cold Pinus... 87 1e-039
gb|DR025585.1|DR025585 STRS1_72_B06.g1_A034 Shoot tip pitch... 124 1e-039
gb|BX682771.1|BX682771 BX682771 Pinus pinaster differenciat... 105 1e-039
gb|CO161095.1|CO161095 FLD1_26_D04.g1_A029 Root flooded Pin... 102 2e-039
gb|DR167978.1|DR167978 RTPHOS1_22_A01.g1_A029 Roots minus p... 107 3e-039
gb|CO170459.1|CO170459 NDL1_14_A01.g1_A029 Needles control ... 94 3e-039
gb|AW010566.1|AW010566 ST08C07 Pine TriplEx shoot tip libra... 100 4e-039
gb|BX251939.1|BX251939 BX251939 Pinus pinaster differenciat... 107 5e-039
gb|DR094190.1|DR094190 STRR1_13_B09.b1_A033 Stem Response R... 84 5e-039
gb|CO167635.1|CO167635 FLD1_70_E03.b1_A029 Root flooded Pin... 124 6e-039
gb|BE643834.1|BE643834 NXCI_047_H01_F NXCI (Nsf Xylem Compr... 161 1e-038
gb|CF399156.1|CF399156 RTDS3_9_D08.g1_A022 Drought-stressed... 102 2e-038
gb|CO363190.1|CO363190 RTK1_8_E03.b1_A029 Roots minus potas... 74 2e-038
gb|CO175311.1|CO175311 NDL1_53_G09.g1_A029 Needles control ... 102 2e-038
gb|CV032287.1|CV032287 RTNACL1_7_D04.b1_A029 Roots plus add... 111 2e-038
gb|DR690196.1|DR690196 EST1080282 Normalized pine embryo li... 107 3e-038
gb|CO159815.1|CO159815 FLD1_16_D07.b1_A029 Root flooded Pin... 81 4e-038
gb|CV147587.1|CV147587 EST858796 Sequencing ESTs from loblo... 102 5e-038
gb|CF387946.1|CF387946 RTDR1_17_G09.b1_A015 Loblolly pine r... 102 7e-038
gb|CO201193.1|CO201193 RTCNT2_4_E07.b1_A029 Root control 2 ... 122 1e-037
gb|CF475497.1|CF475497 RTWW2_12_G05.g1_A021 Well-watered lo... 105 2e-037
gb|DR163900.1|DR163900 RTFE1_45_D05.g1_A029 Roots minus iro... 102 2e-037
gb|CF395300.1|CF395300 RTDS2_10_A10.g1_A021 Drought-stresse... 104 2e-037
gb|CF388941.1|CF388941 RTDR2_16_G01.g1_A021 Loblolly pine r... 104 2e-037
gb|CF473266.1|CF473266 RTWW2_1_E11.g1_A021 Well-watered lob... 104 2e-037
gb|CF476316.1|CF476316 RTWW2_22_G02.g1_A021 Well-watered lo... 90 3e-037
gb|CF387393.1|CF387393 RTDR1_12_A02.g1_A015 Loblolly pine r... 103 4e-037
gb|DR681903.1|DR681903 EST1071978 Normalized pine embryo li... 78 6e-037
gb|CF399597.1|CF399597 RTDS3_26_H07.g1_A022 Drought-stresse... 95 7e-037
gb|BX251512.1|BX251512 BX251512 Pinus pinaster differenciat... 107 7e-037
gb|DN448128.1|DN448128 EST943927 Sequencing ESTs from loblo... 102 7e-037
gb|CV146973.1|CV146973 EST858182 Sequencing ESTs from loblo... 102 7e-037
gb|DR014440.1|DR014440 HEAT1_49_B08.g1_A029 Root at 37 C fo... 102 7e-037
gb|CO364616.1|CO364616 RTK1_16_F08.g1_A029 Roots minus pota... 102 7e-037
gb|CO162026.1|CO162026 FLD1_32_F01.g1_A029 Root flooded Pin... 102 7e-037
gb|CO365458.1|CO365458 RTK1_17_E03.b1_A029 Roots minus pota... 102 7e-037
gb|CO367769.1|CO367769 RTK1_36_B08.g1_A029 Roots minus pota... 102 7e-037
gb|CX646797.1|CX646797 COLD1_11_C12.g1_A029 Root cold Pinus... 102 7e-037
gb|CX650094.1|CX650094 COLD1_43_B02.g1_A029 Root cold Pinus... 102 7e-037
gb|CO167190.1|CO167190 FLD1_67_A10.g1_A029 Root flooded Pin... 102 7e-037
gb|DR386901.1|DR386901 RTHG1_18_D06.b1_A029 Roots plus adde... 102 7e-037
gb|CO161591.1|CO161591 FLD1_29_H08.g1_A029 Root flooded Pin... 102 7e-037
gb|CV031822.1|CV031822 RTNACL1_3_H11.g1_A029 Roots plus add... 102 7e-037
gb|DR023065.1|DR023065 STRS1_55_F06.b1_A034 Shoot tip pitch... 102 7e-037
gb|DR164207.1|DR164207 RTFE1_47_B07.g1_A029 Roots minus iro... 102 7e-037
gb|DR179218.1|DR179218 RTMNUT1_16_F04.g1_A029 Roots minus m... 102 7e-037
gb|DR687693.1|DR687693 EST1077775 Normalized pine embryo li... 102 7e-037
gb|CO200614.1|CO200614 GEO2_8_B04.g1_A032 Root gravitropism... 102 7e-037
gb|CO366268.1|CO366268 RTK1_26_G11.g1_A029 Roots minus pota... 102 7e-037
gb|DR384336.1|DR384336 RTHG1_1_C08.g1_A029 Roots plus added... 102 7e-037
gb|CX646103.1|CX646103 COLD1_7_G07.b1_A029 Root cold Pinus ... 102 7e-037
gb|CF400470.1|CF400470 RTWW1_5_F09.g1_A015 Well-watered lob... 102 7e-037
gb|DR098132.1|DR098132 STRR1_39_G04.b1_A033 Stem Response R... 102 7e-037
gb|DR384598.1|DR384598 RTHG1_3_F11.b1_A029 Roots plus added... 102 7e-037
gb|CO160543.1|CO160543 FLD1_21_F05.g1_A029 Root flooded Pin... 102 7e-037
gb|CO159233.1|CO159233 FLD1_12_G07.b1_A029 Root flooded Pin... 102 7e-037
gb|DR050145.1|DR050145 RTBOR1_21_C06.g1_A029 Roots plus add... 102 7e-037
gb|CV031759.1|CV031759 RTNACL1_3_B11.g1_A029 Roots plus add... 102 7e-037
gb|DR384883.1|DR384883 RTHG1_5_E10.b1_A029 Roots plus added... 102 7e-037
gb|CF387269.1|CF387269 RTDR1_11_F10.g1_A015 Loblolly pine r... 102 7e-037
gb|CF402173.1|CF402173 RTWW1_20_D10.g1_A015 Well-watered lo... 102 7e-037
gb|CO363095.1|CO363095 RTK1_7_D04.g1_A029 Roots minus potas... 102 7e-037
gb|DR176858.1|DR176858 RTMNUT1_1_A07.g1_A029 Roots minus mi... 102 7e-037
gb|DR385339.1|DR385339 RTHG1_8_C09.b1_A029 Roots plus added... 102 7e-037
gb|CF386751.1|CF386751 RTDR1_16_F12.g1_A015 Loblolly pine r... 102 7e-037
gb|DT624436.1|DT624436 EST1158711 Sequencing ESTs from lobl... 102 7e-037
gb|CF387887.1|CF387887 RTDR1_18_F01.g1_A015 Loblolly pine r... 102 7e-037
gb|DR161431.1|DR161431 RTFE1_11_F05.g1_A029 Roots minus iro... 102 7e-037
gb|CO361896.1|CO361896 NDL2_7_F10.g1_A029 Needles control 2... 102 7e-037
gb|CF399876.1|CF399876 RTWW1_1_F06.g1_A015 Well-watered lob... 102 7e-037
gb|CF400875.1|CF400875 RTWW1_8_C07.g1_A015 Well-watered lob... 102 7e-037
gb|DR179193.1|DR179193 RTMNUT1_16_D01.g1_A029 Roots minus m... 102 7e-037
gb|CF668927.1|CF668927 RTCNT1_39_B09.g1_A029 Root control P... 102 7e-037
gb|CO169248.1|CO169248 NDL1_5_E11.g1_A029 Needles control P... 102 7e-037
gb|DR388656.1|DR388656 RTHG1_29_D09.g1_A029 Roots plus adde... 102 7e-037
gb|CO367059.1|CO367059 RTK1_31_H08.g1_A029 Roots minus pota... 102 7e-037
gb|CF401876.1|CF401876 RTWW1_15_G06.g1_A015 Well-watered lo... 102 7e-037
gb|DR109633.1|DR109633 RTS1_3_D09.g1_A029 Roots minus sulfu... 102 7e-037
gb|CO198482.1|CO198482 GEO1_14_B04.b1_A029 Root gravitropis... 102 7e-037
gb|CO174493.1|CO174493 NDL1_44_H02.b1_A029 Needles control ... 102 7e-037
gb|CO369899.1|CO369899 RTK1_55_B11.b1_A029 Roots minus pota... 102 7e-037
gb|DR061039.1|DR061039 RTNIT1_31_E02.g1_A029 Roots minus ni... 102 7e-037
gb|CF474177.1|CF474177 RTWW2_17_D01.b1_A021 Well-watered lo... 102 7e-037
gb|CO158684.1|CO158684 FLD1_8_B12.g1_A029 Root flooded Pinu... 102 7e-037
gb|CF385986.1|CF385986 RTDR1_7_G04.g1_A015 Loblolly pine ro... 102 7e-037
gb|CF402351.1|CF402351 RTWW1_19_D06.g1_A015 Well-watered lo... 102 7e-037
gb|CO168007.1|CO168007 FLD1_72_E01.g1_A029 Root flooded Pin... 102 7e-037
gb|CF400190.1|CF400190 RTWW1_3_A07.g1_A015 Well-watered lob... 102 7e-037
gb|CF673138.1|CF673138 RTCNT1_76_H06.b1_A029 Root control P... 102 7e-037
gb|DR060587.1|DR060587 RTNIT1_28_F06.g1_A029 Roots minus ni... 102 7e-037
gb|CF471005.1|CF471005 RTDS1_15_C12.g1_A015 Drought-stresse... 102 7e-037
gb|CF666587.1|CF666587 RTCNT1_24_A05.g1_A029 Root control P... 102 7e-037
gb|CO176113.1|CO176113 NDL1_59_G04.g1_A029 Needles control ... 102 7e-037
gb|CF400340.1|CF400340 RTWW1_4_E04.g1_A015 Well-watered lob... 102 7e-037
gb|CF476609.1|CF476609 RTWW3_2_B05.g1_A022 Well-watered lob... 102 7e-037
gb|CF400987.1|CF400987 RTWW1_9_A07.b1_A015 Well-watered lob... 102 7e-037
gb|CO200015.1|CO200015 GEO2_4_H12.g1_A032 Root gravitropism... 102 7e-037
gb|CX646040.1|CX646040 COLD1_6_H10.g1_A029 Root cold Pinus ... 102 7e-037
gb|CF669854.1|CF669854 RTCNT1_46_B01.g1_A029 Root control P... 102 7e-037
gb|DR069127.1|DR069127 RTDK1_5_C09.b1_A029 Roots, dark Pinu... 78 9e-037
gb|DR095647.1|DR095647 STRR1_22_D10.g1_A033 Stem Response R... 102 1e-036
gb|DR176926.1|DR176926 RTMNUT1_1_H07.g1_A029 Roots minus mi... 102 1e-036
gb|DR093689.1|DR093689 STRR1_9_G02.g1_A033 Stem Response Re... 103 1e-036
gb|CF670990.1|CF670990 RTCNT1_54_A05.b1_A029 Root control P... 102 1e-036
gb|DR068913.1|DR068913 RTDK1_3_D07.g1_A029 Roots, dark Pinu... 125 2e-036
gb|CF671073.1|CF671073 RTCNT1_54_B11.g1_A029 Root control P... 125 2e-036
gb|DR069204.1|DR069204 RTDK1_5_C09.g1_A029 Roots, dark Pinu... 102 2e-036
gb|CF479403.1|CF479403 RTWW3_23_A03.g1_A022 Well-watered lo... 101 2e-036
gb|DR692435.1|DR692435 EST1082523 Normalized pine embryo li... 101 2e-036
gb|CX712836.1|CX712836 RTPQ1_5_D01.b1_A032 Roots treated wi... 100 2e-036
gb|DR011031.1|DR011031 HEAT1_2_H09.g1_A029 Root at 37 C for... 75 2e-036
gb|DR179629.1|DR179629 RTMNUT1_23_G07.b2_A029 Roots minus m... 125 2e-036
gb|DR164991.1|DR164991 RTPHOS1_1_E07.g1_A029 Roots minus ph... 102 2e-036
gb|DR048415.1|DR048415 RTBOR1_8_F09.g2_A029 Roots plus adde... 75 3e-036
gb|AA556765.1|AA556765 607 Loblolly pine NA Pinus taeda cDN... 104 3e-036
gb|BX253868.1|BX253868 BX253868 Pinus pinaster differenciat... 100 1e-035
gb|CV033233.1|CV033233 RTNACL1_33_E06.b1_A029 Roots plus ad... 103 1e-035
gb|CX715642.1|CX715642 RTPQ1_35_C04.g1_A032 Roots treated w... 92 2e-035
gb|CV034393.1|CV034393 RTNACL1_40_D08.g1_A029 Roots plus ad... 102 2e-035
gb|CR393168.1|CR393168 CR393168 RN Pinus pinaster cDNA clon... 148 2e-035
gb|CO365014.1|CO365014 RTK1_23_D06.b1_A029 Roots minus pota... 104 2e-035
gb|CF397644.1|CF397644 RTDS3_4_D06.g1_A022 Drought-stressed... 103 3e-035
gb|CO170245.1|CO170245 NDL1_12_E03.g1_A029 Needles control ... 103 3e-035
gb|DR116829.1|DR116829 RTMG1_3_B10.b1_A029 Roots minus magn... 71 4e-035
gb|DR100891.1|DR100891 STRR1_69_C06.b1_A033 Stem Response R... 124 6e-035
gb|BI398009.1|BI398009 NXPV_113_D03_F NXPV (Nsf Xylem Plani... 103 6e-035
gb|CO167122.1|CO167122 FLD1_67_A10.b1_A029 Root flooded Pin... 71 6e-035
gb|BX249419.1|BX249419 BX249419 Pinus pinaster differenciat... 107 7e-035
gb|CV035389.1|CV035389 RTNACL1_15_E11.g1_A029 Roots plus ad... 68 3e-034
gb|BE187050.1|BE187050 NXNV_158_B11_F Nsf Xylem Normal wood... 111 3e-034
gb|DR102267.1|DR102267 STRR1_79_F04.g1_A033 Stem Response R... 103 3e-034
gb|CX648291.1|CX648291 COLD1_27_E12.g1_A029 Root cold Pinus... 78 3e-034
gb|DR110981.1|DR110981 RTS1_14_B02.g1_A029 Roots minus sulf... 68 3e-034
gb|DR081232.1|DR081232 RTFEPL1_28_F11.b1_A029 Roots plus ad... 68 3e-034
gb|CO158677.1|CO158677 FLD1_8_B02.g1_A029 Root flooded Pinu... 102 4e-034
gb|CV034928.1|CV034928 RTNACL1_12_C01.g1_A029 Roots plus ad... 102 4e-034
gb|CF399930.1|CF399930 RTWW1_2_C09.b1_A015 Well-watered lob... 102 4e-034
gb|CF400426.1|CF400426 RTWW1_5_H06.b1_A015 Well-watered lob... 102 4e-034
gb|DR071220.1|DR071220 RTDK1_18_A06.g1_A029 Roots, dark Pin... 102 4e-034
gb|CF395992.1|CF395992 RTDS2_20_F05.g1_A021 Drought-stresse... 104 5e-034
gb|AW497816.1|AW497816 PC02F02 Pine TriplEx pollen cone lib... 108 5e-034
gb|CO362644.1|CO362644 RTK1_5_A10.b1_A029 Roots minus potas... 102 6e-034
gb|CO169502.1|CO169502 NDL1_7_B06.g1_A029 Needles control P... 76 7e-034
gb|CO160935.1|CO160935 FLD1_25_C05.g1_A029 Root flooded Pin... 124 7e-034
gb|DR048293.1|DR048293 RTBOR1_7_F12.g2_A029 Roots plus adde... 67 8e-034
gb|DR013996.1|DR013996 HEAT1_22_F11.g1_A029 Root at 37 C fo... 76 8e-034
gb|CF475200.1|CF475200 RTWW2_14_B11.g1_A021 Well-watered lo... 111 9e-034
gb|BQ700348.1|BQ700348 NXRV104_D06_F NXRV (Nsf Xylem Root w... 105 9e-034
gb|BM427822.1|BM427822 NXRV_003_G04_F NXRV (Nsf Xylem Root ... 103 1e-033
gb|DR015826.1|DR015826 STRS1_5_H03.g1_A034 Shoot tip pitch ... 76 1e-033
gb|DR176916.1|DR176916 RTMNUT1_1_G07.g1_A029 Roots minus mi... 66 1e-033
gb|CO368769.1|CO368769 RTK1_42_E07.g1_A029 Roots minus pota... 102 2e-033
gb|BX255292.1|BX255292 BX255292 Pinus pinaster differenciat... 102 2e-033
gb|BQ290652.1|BQ290652 NXRV047_H08_F NXRV (Nsf Xylem Root w... 100 2e-033
gb|BG832777.1|BG832777 NXPV_079_G07_F NXPV (Nsf Xylem Plani... 100 2e-033
gb|AW042608.1|AW042608 ST23H06 Pine TriplEx shoot tip libra... 107 2e-033
gb|CX712796.1|CX712796 RTPQ1_4_G10.g2_A032 Roots treated wi... 66 2e-033
gb|BQ698675.1|BQ698675 NXPV_074_G10_F NXPV (Nsf Xylem Plani... 102 2e-033
gb|BQ655076.1|BQ655076 NXRV090_A01_F NXRV (Nsf Xylem Root w... 100 2e-033
gb|DR164061.1|DR164061 RTFE1_46_C08.g1_A029 Roots minus iro... 76 3e-033
gb|DN614689.1|DN614689 EST967739 Subtracted pine embryo lib... 99 3e-033
gb|DR059074.1|DR059074 RTNIT1_15_C03.g1_A029 Roots minus ni... 99 6e-033
gb|DT635911.1|DT635911 EST1150842 Normalized pine embryo li... 108 7e-033
gb|CX647384.1|CX647384 COLD1_16_A08.b1_A029 Root cold Pinus... 102 8e-033
gb|DR010957.1|DR010957 HEAT1_2_H09.b1_A029 Root at 37 C for... 102 1e-032
gb|CF472614.1|CF472614 RTDS1_10_H01.g1_A015 Drought-stresse... 102 1e-032
gb|CF479379.1|CF479379 RTWW3_23_F07.g1_A022 Well-watered lo... 102 1e-032
gb|CF385185.1|CF385185 RTDR1_2_E07.g1_A015 Loblolly pine ro... 102 1e-032
gb|CF385249.1|CF385249 RTDR1_2_G06.g1_A015 Loblolly pine ro... 102 1e-032
gb|BG318325.1|BG318325 NXPV_012_C08_F NXPV (Nsf Xylem Plani... 102 1e-032
gb|AY867762.1| Pinus taeda isolate FBRC1 cysteine protease ... 84 1e-032
gb|AY867759.1| Pinus taeda isolate FBRC14 cysteine protease... 84 1e-032
gb|AY867761.1| Pinus taeda isolate FBRC16 cysteine protease... 84 1e-032
gb|AY867763.1| Pinus taeda isolate FBRC2 cysteine protease ... 84 1e-032
gb|AY867765.1| Pinus taeda isolate FBRC9 cysteine protease ... 84 1e-032
gb|AY867767.1| Pinus taeda isolate FBRC17 cysteine protease... 84 1e-032
gb|AY867768.1| Pinus taeda isolate FBRC22 cysteine protease... 84 1e-032
gb|AY867771.1| Pinus taeda isolate FBRC6 cysteine protease ... 84 1e-032
gb|AY867773.1| Pinus taeda isolate FBRC20 cysteine protease... 84 1e-032
gb|AY867775.1| Pinus taeda isolate FBRC23 cysteine protease... 84 1e-032
gb|AY867777.1| Pinus taeda isolate FBRC25 cysteine protease... 84 1e-032
gb|AY867778.1| Pinus taeda isolate FBRC26 cysteine protease... 84 1e-032
gb|AY867779.1| Pinus taeda isolate FBRC27 cysteine protease... 84 1e-032
gb|AY867781.1| Pinus taeda isolate FBRC28 cysteine protease... 84 1e-032
gb|AY867784.1| Pinus taeda isolate FBRC30 cysteine protease... 84 1e-032
gb|AY867787.1| Pinus taeda isolate FBRC19 cysteine protease... 84 1e-032
gb|AY867788.1| Pinus taeda isolate FBRC32 cysteine protease... 84 1e-032
gb|AY867790.1| Pinus taeda isolate FBRC13 cysteine protease... 84 1e-032
gb|AY867760.1| Pinus taeda isolate FBRC15 cysteine protease... 84 1e-032
gb|AY867772.1| Pinus taeda isolate FBRC7 cysteine protease ... 84 1e-032
gb|AY867776.1| Pinus taeda isolate FBRC24 cysteine protease... 84 1e-032
gb|AY867764.1| Pinus taeda isolate FBRC3 cysteine protease ... 84 2e-032
gb|AY867774.1| Pinus taeda isolate FBRC12 cysteine protease... 84 2e-032
gb|AY867780.1| Pinus taeda isolate FBRC10 cysteine protease... 84 2e-032
gb|AY867786.1| Pinus taeda isolate FBRC11 cysteine protease... 84 2e-032
gb|AY867789.1| Pinus taeda isolate FBRC4 cysteine protease ... 84 2e-032
gb|AY867769.1| Pinus taeda isolate FBRC5 cysteine protease ... 84 2e-032
gb|AY867770.1| Pinus taeda isolate FBRC18 cysteine protease... 84 2e-032
gb|AY867782.1| Pinus taeda isolate FBRC29 cysteine protease... 84 2e-032
gb|AY867783.1| Pinus taeda isolate FBRC33 cysteine protease... 84 2e-032
gb|AY867785.1| Pinus taeda isolate FBRC31 cysteine protease... 84 2e-032
gb|DR178812.1|DR178812 RTMNUT1_14_D10.b1_A029 Roots minus m... 124 2e-032
gb|BQ697406.1|BQ697406 NXPV_053_G02_F NXPV (Nsf Xylem Plani... 103 2e-032
gb|CO162906.1|CO162906 FLD1_38_F07.b1_A029 Root flooded Pin... 95 3e-032
gb|DR052775.1|DR052775 RTCA1_6_F12.g1_A029 Roots minus calc... 95 3e-032
gb|CO365224.1|CO365224 RTK1_24_H11.b1_A029 Roots minus pota... 103 3e-032
gb|CV034724.1|CV034724 RTNACL1_11_D10.b1_A029 Roots plus ad... 73 4e-032
gb|AY867766.1| Pinus taeda isolate FBRC21 cysteine protease... 84 4e-032
gb|CF477066.1|CF477066 RTWW3_5_D03.g1_A022 Well-watered lob... 76 5e-032
gb|DR080819.1|DR080819 RTFEPL1_25_A05.g1_A029 Roots plus ad... 102 5e-032
gb|DR080761.1|DR080761 RTFEPL1_25_C02.b1_A029 Roots plus ad... 73 5e-032
gb|CO200116.1|CO200116 GEO2_5_B10.g1_A032 Root gravitropism... 76 8e-032
gb|BQ696527.1|BQ696527 NXPV_042_C09_F NXPV (Nsf Xylem Plani... 102 1e-031
gb|DR071245.1|DR071245 RTDK1_18_D03.g1_A029 Roots, dark Pin... 108 1e-031
gb|DR019876.1|DR019876 STRS1_33_C04.b1_A034 Shoot tip pitch... 137 2e-031
gb|DR118827.1|DR118827 RTMG1_19_A05.g1_A029 Roots minus mag... 95 3e-031
gb|BX249878.1|BX249878 BX249878 Pinus pinaster differenciat... 107 4e-031
gb|AA739982.1|AA739982 747 PtIFG2 Pinus taeda cDNA clone 91... 68 6e-031
gb|DR080647.1|DR080647 RTFEPL1_24_E06.b1_A029 Roots plus ad... 66 9e-031
gb|CX651221.1|CX651221 COLD1_51_A06.b1_A029 Root cold Pinus... 87 1e-030
gb|CO199518.1|CO199518 GEO2_1_F10.g1_A032 Root gravitropism... 124 2e-030
gb|DR116571.1|DR116571 RTMG1_1_H03.b1_A029 Roots minus magn... 99 2e-030
gb|CV035599.1|CV035599 RTNACL1_41_D03.b1_A029 Roots plus ad... 71 2e-030
gb|CO167792.1|CO167792 FLD1_71_E11.b1_A029 Root flooded Pin... 124 2e-030
gb|DR178758.1|DR178758 RTMNUT1_13_G02.g1_A029 Roots minus m... 124 2e-030
gb|DR166034.1|DR166034 RTPHOS1_8_H04.g1_A029 Roots minus ph... 70 4e-030
gb|DR089180.1|DR089180 RTAL1_7_B08.b1_A029 Roots plus added... 64 4e-030
gb|BX681068.1|BX681068 BX681068 RS Pinus pinaster cDNA clon... 123 5e-030
gb|DR070564.1|DR070564 RTDK1_14_D03.b1_A029 Roots, dark Pin... 124 9e-030
gb|DR023668.1|DR023668 STRS1_59_F05.b1_A034 Shoot tip pitch... 124 1e-029
gb|CO370214.1|CO370214 RTK1_66_G02.b1_A029 Roots minus pota... 124 1e-029
gb|DR022761.1|DR022761 STRS1_53_G05.b1_A034 Shoot tip pitch... 124 1e-029
gb|CO200618.1|CO200618 GEO2_8_B09.g1_A032 Root gravitropism... 71 1e-029
gb|AL751298.1|AL751298 AL751298 RS Pinus pinaster cDNA clon... 130 3e-029
gb|BX682808.1|BX682808 BX682808 Pinus pinaster differenciat... 130 3e-029
gb|DR052694.1|DR052694 RTCA1_6_F12.b1_A029 Roots minus calc... 60 5e-029
gb|DR081511.1|DR081511 RTFEPL1_30_E06.b1_A029 Roots plus ad... 73 5e-029
gb|DR051028.1|DR051028 RTBOR1_27_E11.b1_A029 Roots plus add... 65 6e-029
gb|AI812656.1|AI812656 17E5 Pine Lambda Zap Xylem library P... 78 7e-029
gb|DR080716.1|DR080716 RTFEPL1_24_E06.g1_A029 Roots plus ad... 90 7e-029
gb|CO161953.1|CO161953 FLD1_32_F01.b1_A029 Root flooded Pin... 64 7e-029
gb|DR058442.1|DR058442 RTNIT1_11_G04.g1_A029 Roots minus ni... 99 8e-029
gb|CF397295.1|CF397295 RTDS3_2_E06.g1_A022 Drought-stressed... 64 8e-029
gb|DR388580.1|DR388580 RTHG1_29_D09.b1_A029 Roots plus adde... 64 9e-029
gb|DR384682.1|DR384682 RTHG1_3_G09.g1_A029 Roots plus added... 106 1e-028
gb|DR687450.1|DR687450 EST1077532 Normalized pine embryo li... 102 2e-028
gb|CF470459.1|CF470459 RTDS1_17_D04.g1_A015 Drought-stresse... 102 2e-028
gb|CO158833.1|CO158833 FLD1_9_C04.g1_A029 Root flooded Pinu... 102 2e-028
gb|DR020679.1|DR020679 STRS1_38_C09.g1_A034 Shoot tip pitch... 102 2e-028
gb|DR097876.1|DR097876 STRR1_37_D06.g1_A033 Stem Response R... 102 2e-028
gb|CF672639.1|CF672639 RTCNT1_73_B01.b1_A029 Root control P... 102 2e-028
gb|DR684249.1|DR684249 EST1074326 Normalized pine embryo li... 78 2e-028
gb|CF475159.1|CF475159 RTWW2_14_B11.b1_A021 Well-watered lo... 86 3e-028
gb|DR681904.1|DR681904 EST1071979 Normalized pine embryo li... 102 3e-028
gb|CV031741.1|CV031741 RTNACL1_3_A05.g1_A029 Roots plus add... 102 3e-028
gb|CF387656.1|CF387656 RTDR1_19_F09.b1_A015 Loblolly pine r... 102 3e-028
gb|CF474898.1|CF474898 RTWW2_8_D09.g1_A021 Well-watered lob... 102 3e-028
gb|CF665907.1|CF665907 RTCNT1_19_G10.b1_A029 Root control P... 105 4e-028
gb|CO370275.1|CO370275 RTK1_66_G02.g1_A029 Roots minus pota... 105 4e-028
gb|DR013682.1|DR013682 HEAT1_20_G08.g1_A029 Root at 37 C fo... 97 5e-028
gb|CF476936.1|CF476936 RTWW3_4_C09.g1_A022 Well-watered lob... 102 6e-028
gb|CF666853.1|CF666853 RTCNT1_26_C11.g1_A029 Root control P... 76 8e-028
gb|DR097699.1|DR097699 STRR1_36_A09.g3_A033 Stem Response R... 76 8e-028
gb|CO368712.1|CO368712 RTK1_42_G10.b1_A029 Roots minus pota... 76 8e-028
gb|DR097710.1|DR097710 STRR1_36_B09.g3_A033 Stem Response R... 76 8e-028
gb|DR167430.1|DR167430 RTPHOS1_18_F05.g1_A029 Roots minus p... 76 8e-028
gb|CF390729.1|CF390729 RTDR2_17_C10.g1_A021 Loblolly pine r... 76 8e-028
gb|DR384651.1|DR384651 RTHG1_3_D08.g1_A029 Roots plus added... 76 8e-028
gb|CV032025.1|CV032025 RTNACL1_5_F01.b1_A029 Roots plus add... 76 8e-028
gb|CO365570.1|CO365570 RTK1_17_G09.g1_A029 Roots minus pota... 76 8e-028
gb|CF394874.1|CF394874 RTDS2_8_F11.b1_A021 Drought-stressed... 76 8e-028
gb|CF672243.1|CF672243 RTCNT1_62_G04.b1_A029 Root control P... 76 8e-028
gb|DR025460.1|DR025460 STRS1_71_F03.g1_A034 Shoot tip pitch... 76 8e-028
gb|CO159863.1|CO159863 FLD1_16_B08.g1_A029 Root flooded Pin... 76 1e-027
gb|CF396190.1|CF396190 RTDS2_15_C09.g1_A021 Drought-stresse... 64 1e-027
gb|AW985324.1|AW985324 NXNV_135_H04_F Nsf Xylem Normal wood... 124 2e-027
gb|BE458111.1|BE458111 NXCI_008_F07_F NXCI (Nsf Xylem Compr... 124 2e-027
gb|CF398375.1|CF398375 RTDS3_12_E06.b1_A022 Drought-stresse... 124 2e-027
gb|CO165091.1|CO165091 FLD1_52_G05.b1_A029 Root flooded Pin... 124 2e-027
gb|CO167274.1|CO167274 FLD1_68_A07.b1_A029 Root flooded Pin... 124 2e-027
gb|CO171100.1|CO171100 NDL1_19_B11.b1_A029 Needles control ... 124 2e-027
gb|CO171152.1|CO171152 NDL1_19_B11.g1_A029 Needles control ... 124 2e-027
gb|CO198528.1|CO198528 GEO1_14_H05.b1_A029 Root gravitropis... 124 2e-027
gb|CO201321.1|CO201321 RTCNT2_5_B04.b1_A029 Root control 2 ... 124 2e-027
gb|CO369007.1|CO369007 RTK1_44_G12.b1_A029 Roots minus pota... 124 2e-027
gb|CX712540.1|CX712540 RTPQ1_3_D08.b2_A032 Roots treated wi... 124 2e-027
gb|DR012805.1|DR012805 HEAT1_15_D05.b1_A029 Root at 37 C fo... 124 2e-027
gb|DR013603.1|DR013603 HEAT1_20_G08.b1_A029 Root at 37 C fo... 124 2e-027
gb|DR015048.1|DR015048 STRS1_1_E04.b1_A034 Shoot tip pitch ... 124 2e-027
gb|DR017559.1|DR017559 STRS1_17_C06.b1_A034 Shoot tip pitch... 124 2e-027
gb|DR020619.1|DR020619 STRS1_38_E06.b1_A034 Shoot tip pitch... 124 2e-027
gb|DR022838.1|DR022838 STRS1_53_G05.g1_A034 Shoot tip pitch... 124 2e-027
gb|DR050120.1|DR050120 RTBOR1_21_H12.b1_A029 Roots plus add... 124 2e-027
gb|DR093933.1|DR093933 STRR1_11_H02.b1_A033 Stem Response R... 124 2e-027
gb|CF672993.1|CF672993 RTCNT1_75_G08.b1_A029 Root control P... 69 2e-027
gb|DR019235.1|DR019235 STRS1_28_D09.g1_A034 Shoot tip pitch... 64 2e-027
gb|BG317615.1|BG317615 NXPV_003_G11_F NXPV (Nsf Xylem Plani... 100 2e-027
gb|CF390361.1|CF390361 RTDR2_19_H08.b1_A021 Loblolly pine r... 124 2e-027
gb|CF390820.1|CF390820 RTDR3_2_D03.b1_A022 Loblolly pine ro... 124 2e-027
gb|CF392344.1|CF392344 RTDR3_7_H01.b1_A022 Loblolly pine ro... 124 2e-027
gb|CF393883.1|CF393883 RTDS2_1_G06.g1_A021 Drought-stressed... 124 2e-027
gb|CF393886.1|CF393886 RTDS2_1_F11.g1_A021 Drought-stressed... 124 2e-027
gb|CF398899.1|CF398899 RTDS3_11_H09.b1_A022 Drought-stresse... 124 2e-027
gb|CF402528.1|CF402528 RTWW1_21_D01.b1_A015 Well-watered lo... 124 2e-027
gb|CF402812.1|CF402812 RTWW1_23_E10.b1_A015 Well-watered lo... 124 2e-027
gb|CF663933.1|CF663933 RTCNT1_6_C10.b1_A029 Root control Pi... 124 2e-027
gb|CF665976.1|CF665976 RTCNT1_19_G10.g1_A029 Root control P... 124 2e-027
gb|CF668350.1|CF668350 RTCNT1_36_A09.b1_A029 Root control P... 124 2e-027
gb|CF668906.1|CF668906 RTCNT1_39_H10.b1_A029 Root control P... 124 2e-027
gb|CF671301.1|CF671301 RTCNT1_56_D09.b1_A029 Root control P... 124 2e-027
gb|CO158632.1|CO158632 FLD1_8_E01.b1_A029 Root flooded Pinu... 124 2e-027
gb|CX650820.1|CX650820 COLD1_48_G09.b1_A029 Root cold Pinus... 124 2e-027
gb|CX651417.1|CX651417 COLD1_52_F07.b1_A029 Root cold Pinus... 124 2e-027
>gb|CO199449.1|CO199449 GEO2_1_F10.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_1_F10_A032 3', mRNA sequence
Length = 890
Score = 353 bits (765), Expect(2) = e-116
Identities = 135/202 (66%), Positives = 162/202 (80%)
Frame = +2 / -2
Query: 536 GEQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQELIDCD 715
GE LP ++DWRE+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG LISLSEQEL+DCD
Sbjct: 859 GEDLPKSIDWREKGAVAPVKDQGACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCD 680
Query: 716 KFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPI 895
+QGC+GGLMD AF F+I NGG+D+E DYP+T +DG+CD KN VV+ID +E VP
Sbjct: 679 TSYNQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPE 500
Query: 896 NYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYW 1075
N E++L+KA A+QP+S +IEAS R FQ Y SG+F CGT LDHGVT+VGYGSE G DYW
Sbjct: 499 NDEKSLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSESGTDYW 320
Query: 1076 IVKNSWGTQWGEAGYVRMARNV 1141
IVKNSWG WGE G++R+ RN+
Sbjct: 319 IVKNSWGKSWGEEGFIRLQRNI 254
Score = 176 bits (379), Expect = 4e-043
Identities = 87/163 (53%), Positives = 102/163 (62%)
Frame = -1 / +3
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS +VP P+ *+WN+ ASM L G A AF N S GT S S+ TT FF
Sbjct: 369 WSSWVPQALVNTPDS*NWNSLPLASMATLIG*LAAAFFNDFSSFSGTSS*SSIVTTWAFF 548
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
SH PS V G*S+S+S PP ++N+KA S++PP PW +SQS SSCSDSE++ PV
Sbjct: 549 L*ASHDPS*AV*G*SSSLSSPPLFMINSKA*SMRPPLHPWL*EVSQSTSSCSDSEIKSPV 728
Query: 666 TILLIPSTAATAENAQHPPHWPWSLTSATAPRSRQSTASGSCS 538
TI LIPSTAAT ENAQ PH PWS T ATAP S QS G S
Sbjct: 729 TI*LIPSTAATVENAQQLPHAPWSFTGATAPFSLQSMDFGKSS 857
Score = 87.7 bits (185), Expect(2) = e-116
Identities = 26/45 (57%), Positives = 36/45 (80%)
Frame = +2 / -2
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCC 1387
VC+ YSCP++ TCCC+ ++ G C A+GCC L++ATCC+DH SCC
Sbjct: 136 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLDSATCCDDHYSCC 2
>gb|DR070649.1|DR070649 RTDK1_14_F01.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_14_F01_A029 5', mRNA sequence
Length = 847
Score = 359 bits (779), Expect(2) = e-112
Identities = 138/202 (68%), Positives = 165/202 (81%)
Frame = +2 / +1
Query: 536 GEQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQELIDCD 715
GE LP++VDWRE+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG+L SLSEQEL+DCD
Sbjct: 13 GENLPESVDWREKGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 192
Query: 716 KFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPI 895
+QGC+GGLMD AF F+I NGG+D+E DYP+ +DG+CD KN VV+IDS+E VP
Sbjct: 193 TSYNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPE 372
Query: 896 NYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYW 1075
N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+VGYGSE GKDYW
Sbjct: 373 NDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYW 552
Query: 1076 IVKNSWGTQWGEAGYVRMARNV 1141
IVKNSWG WGE G++R+ RN+
Sbjct: 553 IVKNSWGKSWGEKGFIRLQRNI 618
Score = 175 bits (377), Expect(2) = 1e-044
Identities = 87/163 (53%), Positives = 105/163 (64%)
Frame = -1 / -3
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS VP + P+ *+WNA ASM L G CA AF + S GT S S+ TT FF
Sbjct: 503 WSS*VPQVLVNTPDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFF 324
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
S +PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPV
Sbjct: 323 R*ASQLPSLAM*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPV 144
Query: 666 TILLIPSTAATAENAQHPPHWPWSLTSATAPRSRQSTASGSCS 538
TI L+PSTAAT ENAQ P PWSLT+ATAP S QST SG S
Sbjct: 143 TI*LMPSTAATVENAQQLPQEPWSLTAATAPFSLQSTDSGKFS 15
Score = 107 bits (228), Expect = 3e-022
Identities = 56/164 (34%), Positives = 80/164 (48%)
Frame = -3 / -2
Query: 1030 TVVQVRPASPVEDARTVELERAPRCFNAGTNRLVRHGLLQRSLVVDGHTLERINGYNPCI 851
TVVQ+ A E AR V+LER F+ NRL+R GLLQR L+V H IN ++ I
Sbjct: 507 TVVQLSSAGACEHARFVKLERPSAGFDGNANRLMRRGLLQRLLIVLRHIFVAINCHHMGI 328
Query: 850 FQFEIARPVVASERVVGLGVDPAVLDHEHESXXXXXXXXXXXXXXXXVDKLLLRQRDEAA 671
F + +V RV+ L V P V+ + ES + + LL Q + A
Sbjct: 327 FSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHETAIASLVVRSIAIHQFLLGQGSQIA 148
Query: 670 CHDLVDPFHRCHRRERPAPTXXXXXXXXXXXXXXAPVHGVGELL 539
H+L+D F+ HRRERP + +PV+G+ ++L
Sbjct: 147 SHNLIDAFNSSHRRERPTTSAGALVLNSSHGSLFSPVNGLWQIL 16
Score = 67.5 bits (141), Expect(2) = e-112
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +2 / +1
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATC 1363
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATC
Sbjct: 736 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATC 846
Score = 26.3 bits (51), Expect(2) = 1e-044
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 1116 PASPHWVPHEFFTIQ 1072
P SP P EFFTIQ
Sbjct: 593 PFSPQLFPQEFFTIQ 549
>gb|DR011623.1|DR011623 HEAT1_6_H03.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_6_H03_A029 5', mRNA sequence
Length = 781
Score = 289 bits (625), Expect(2) = e-102
Identities = 112/168 (66%), Positives = 136/168 (80%)
Frame = +2 / +3
Query: 638 AAVEGINKIVTGSLISLSEQELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFT 817
AAVEGIN+IVTG+L SLSEQEL+DCD +QGC+GGLMD AF F+I NGG+D+E DYP+
Sbjct: 3 AAVEGINQIVTGNLTSLSEQELVDCDTSYNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYM 182
Query: 818 GHDGTCDLKLKNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIF 997
+DG+CD KN VV+IDS+E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F
Sbjct: 183 ANDGSCDAYRKNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVF 362
Query: 998 DGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
CGT LDHGVT+VGYGSE GKDYWIVKNSWG WGE G++R+ RN+
Sbjct: 363 TSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 506
Score = 129 bits (276), Expect(2) = 7e-031
Identities = 65/130 (50%), Positives = 82/130 (63%)
Frame = -1 / -1
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS VP + P+ *+WNA ASM L G CA AF + S GT S S+ TT FF
Sbjct: 391 WSS*VPQVLVNTPDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFF 212
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
S +PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPV
Sbjct: 211 R*ASQLPSLAM*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPV 32
Query: 666 TILLIPSTAA 637
TI L+PSTAA
Sbjct: 31 TI*LMPSTAA 2
Score = 104 bits (222), Expect(2) = e-102
Identities = 32/52 (61%), Positives = 42/52 (80%)
Frame = +2 / +3
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVC 1408
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC
Sbjct: 624 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVC 779
Score = 26.3 bits (51), Expect(2) = 7e-031
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 1116 PASPHWVPHEFFTIQ 1072
P SP P EFFTIQ
Sbjct: 481 PFSPQLFPQEFFTIQ 437
>gb|CO167267.1|CO167267 FLD1_67_H10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_67_H10_A029 5', mRNA sequence
Length = 814
Score = 270 bits (583), Expect(2) = e-100
Identities = 103/158 (65%), Positives = 126/158 (79%)
Frame = +2 / +3
Query: 668 TGSLISLSEQELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKL 847
TG+L SLSEQEL+DCD +QGC+GGLMD AF F+I NGG+D+E DYP+ +DG+CD
Sbjct: 3 TGNLTSLSEQELVDCDTSYNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYR 182
Query: 848 KNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDH 1027
KN VV+IDS+E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDH
Sbjct: 183 KNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDH 362
Query: 1028 GVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
GVT+VGYGSE GKDYWIVKNSWG WGE G++R+ RN+
Sbjct: 363 GVTLVGYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 476
Score = 117 bits (250), Expect(2) = e-100
Identities = 39/73 (53%), Positives = 51/73 (69%)
Frame = +2 / +3
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC + TC
Sbjct: 594 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 773
Query: 1433 KSANSPMMVKALQ 1471
KS P K L+
Sbjct: 774 KSRKDPFGTKMLK 812
Score = 113 bits (242), Expect(4) = 1e-027
Identities = 57/120 (47%), Positives = 73/120 (60%)
Frame = -1 / -1
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS VP + P+ *+WNA ASM L G CA AF + S GT S S+ TT FF
Sbjct: 361 WSS*VPQVLVNTPDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFF 182
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
S +PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPV
Sbjct: 181 R*ASQLPSLAM*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPV 2
Score = 26.3 bits (51), Expect(4) = 1e-027
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 1116 PASPHWVPHEFFTIQ 1072
P SP P EFFTIQ
Sbjct: 451 PFSPQLFPQEFFTIQ 407
Score = 25.8 bits (50), Expect(4) = 1e-027
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / -1
Query: 1473 RCRAFTIIGLLALLRQVPSRTLHTG*SCGQQ 1381
R F G L LLR V + TG*S GQQ
Sbjct: 814 RFSIFVPNGSLRLLRHVCASRSQTG*SLGQQ 722
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1 / -1
Query: 1317 PRYSETQQQVVASGHEYSALHTL 1249
P S QQQV+ SG E HT+
Sbjct: 658 PPKSYMQQQVLLSGQE**LSHTV 590
>gb|CF668985.1|CF668985 RTCNT1_39_G12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_39_G12_A029 5', mRNA sequence
Length = 736
Score = 355 bits (770), Expect(2) = e-100
Identities = 138/204 (67%), Positives = 164/204 (80%)
Frame = +2 / +3
Query: 518 RYLPLAGEQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQ 697
RY GE LP++VDWRE+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG+L SLSEQ
Sbjct: 123 RYQYSEGENLPESVDWREKGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 302
Query: 698 ELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDS 877
EL+DCD +QGC+GGLMD AF F+I NGG+D+E DYP+ +DG+CD KN VV+IDS
Sbjct: 303 ELVDCDTSYNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDS 482
Query: 878 FERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSE 1057
+E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+VGYGSE
Sbjct: 483 YEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSE 662
Query: 1058 GGKDYWIVKNSWGTQWGEAGYVRM 1129
GKDYWIVKNSWG WGE G++R+
Sbjct: 663 SGKDYWIVKNSWGKSWGEKGFIRL 734
Score = 176 bits (379), Expect(2) = 6e-045
Identities = 87/163 (53%), Positives = 105/163 (64%)
Frame = -1 / -1
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS VP + P+ *+WNA ASM L G CA AF + S GT S S+ TT FF
Sbjct: 631 WSS*VPQVLVNTPDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFF 452
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
S +PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPV
Sbjct: 451 R*ASQLPSLAI*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPV 272
Query: 666 TILLIPSTAATAENAQHPPHWPWSLTSATAPRSRQSTASGSCS 538
TI L+PSTAAT ENAQ P PWSLT+ATAP S QST SG S
Sbjct: 271 TI*LMPSTAATVENAQQLPQEPWSLTAATAPFSLQSTDSGKFS 143
Score = 106 bits (227), Expect = 4e-022
Identities = 56/164 (34%), Positives = 80/164 (48%)
Frame = -3 / -3
Query: 1030 TVVQVRPASPVEDARTVELERAPRCFNAGTNRLVRHGLLQRSLVVDGHTLERINGYNPCI 851
TVVQ+ A E AR V+LER F+ NRL+R GLLQR L+V H IN ++ I
Sbjct: 635 TVVQLSSAGACEHARFVKLERPSAGFDGNANRLMRRGLLQRLLIVLRHIFVAINCHHMGI 456
Query: 850 FQFEIARPVVASERVVGLGVDPAVLDHEHESXXXXXXXXXXXXXXXXVDKLLLRQRDEAA 671
F + +V RV+ L V P V+ + ES + + LL Q + A
Sbjct: 455 FSVSVTAAIVGHIRVIILTVKPTVVYDKLESIIHETAIASLVVRSIAIHQFLLGQGSQIA 276
Query: 670 CHDLVDPFHRCHRRERPAPTXXXXXXXXXXXXXXAPVHGVGELL 539
H+L+D F+ HRRERP + +PV+G+ ++L
Sbjct: 275 SHNLIDAFNSSHRRERPTTSAGALVLNSSHGSLFSPVNGLWQIL 144
Score = 31.3 bits (62), Expect(2) = e-100
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2 / +3
Query: 404 FRLGLTRFADLTLEEYRARLL 466
F+LGL +FADL+ EE++A L
Sbjct: 12 FKLGLNQFADLSHEEFKATYL 74
Score = 26.3 bits (51), Expect(2) = 6e-045
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 1116 PASPHWVPHEFFTIQ 1072
P SP P EFFTIQ
Sbjct: 721 PFSPQLFPQEFFTIQ 677
>gb|CX716008.1|CX716008 RTPQ1_39_C01.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_39_C01_A032 5', mRNA sequence
Length = 687
Score = 361 bits (783), Expect = 8e-099
Identities = 140/208 (67%), Positives = 167/208 (80%)
Frame = +2 / +3
Query: 518 RYLPLAGEQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQ 697
RY GE LP++VDWRE+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG+L SLSEQ
Sbjct: 54 RYQYSEGENLPESVDWREKGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 233
Query: 698 ELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDS 877
EL+DCD +QGC+GGLMD AF F+I NGG+D+E DYP+ +DG+CD KN VV+IDS
Sbjct: 234 ELVDCDTSYNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDS 413
Query: 878 FERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSE 1057
+E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+VGYGSE
Sbjct: 414 YEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSE 593
Query: 1058 GGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
GKDYWIVKNSWG WGE G++R+ RN+
Sbjct: 594 SGKDYWIVKNSWGKSWGEKGFIRLQRNI 677
Score = 175 bits (377), Expect(2) = 1e-044
Identities = 87/163 (53%), Positives = 105/163 (64%)
Frame = -1 / -3
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS VP + P+ *+WNA ASM L G CA AF + S GT S S+ TT FF
Sbjct: 562 WSS*VPQVLVNTPDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFF 383
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
S +PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPV
Sbjct: 382 R*ASQLPSLAM*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPV 203
Query: 666 TILLIPSTAATAENAQHPPHWPWSLTSATAPRSRQSTASGSCS 538
TI L+PSTAAT ENAQ P PWSLT+ATAP S QST SG S
Sbjct: 202 TI*LMPSTAATVENAQQLPQEPWSLTAATAPFSLQSTDSGKFS 74
Score = 107 bits (228), Expect = 3e-022
Identities = 56/164 (34%), Positives = 80/164 (48%)
Frame = -3 / -2
Query: 1030 TVVQVRPASPVEDARTVELERAPRCFNAGTNRLVRHGLLQRSLVVDGHTLERINGYNPCI 851
TVVQ+ A E AR V+LER F+ NRL+R GLLQR L+V H IN ++ I
Sbjct: 566 TVVQLSSAGACEHARFVKLERPSAGFDGNANRLMRRGLLQRLLIVLRHIFVAINCHHMGI 387
Query: 850 FQFEIARPVVASERVVGLGVDPAVLDHEHESXXXXXXXXXXXXXXXXVDKLLLRQRDEAA 671
F + +V RV+ L V P V+ + ES + + LL Q + A
Sbjct: 386 FSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHETAIASLVVRSIAIHQFLLGQGSQIA 207
Query: 670 CHDLVDPFHRCHRRERPAPTXXXXXXXXXXXXXXAPVHGVGELL 539
H+L+D F+ HRRERP + +PV+G+ ++L
Sbjct: 206 SHNLIDAFNSSHRRERPTTSAGALVLNSSHGSLFSPVNGLWQIL 75
Score = 26.3 bits (51), Expect(2) = 1e-044
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 1116 PASPHWVPHEFFTIQ 1072
P SP P EFFTIQ
Sbjct: 652 PFSPQLFPQEFFTIQ 608
>gb|DN462584.1|DN462584 EST958383 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIIO20 5' end, mRNA sequence
Length = 894
Score = 257 bits (556), Expect(2) = 1e-098
Identities = 97/150 (64%), Positives = 119/150 (79%)
Frame = +2 / +3
Query: 692 EQELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSI 871
EQEL+DCD +QGC+GGLMD AF F+I NGG+D+E DYP+ +DG+CD KN VV+I
Sbjct: 3 EQELVDCDTSYNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTI 182
Query: 872 DSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYG 1051
DS+E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+VGYG
Sbjct: 183 DSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYG 362
Query: 1052 SEGGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
SE GKDYWIVKNSWG WGE G++R+ RN+
Sbjct: 363 SESGKDYWIVKNSWGKSWGEKGFIRLQRNI 452
Score = 124 bits (265), Expect(2) = 1e-098
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +2 / +3
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC + TC
Sbjct: 570 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 749
Query: 1433 KSANSPMMVKALQRKPA 1483
KS P K L+R PA
Sbjct: 750 KSRKDPFGTKMLKRTPA 800
Score = 100 bits (214), Expect(4) = 2e-025
Identities = 52/112 (46%), Positives = 66/112 (58%)
Frame = -1 / -3
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS VP + P+ *+WNA ASM L G CA AF + S GT S S+ TT FF
Sbjct: 337 WSS*VPQVLVNTPDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFF 158
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCS 691
S +PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCS
Sbjct: 157 R*ASQLPSLAM*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCS 2
Score = 31.8 bits (63), Expect(4) = 2e-025
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -1 / -3
Query: 1485 IAGLRCRAFTIIGLLALLRQVPSRTLHTG*SCGQQ 1381
+AG+R F G L LLR V + TG*S GQQ
Sbjct: 802 LAGVRFSIFVPNGSLRLLRHVCASRSQTG*SLGQQ 698
Score = 26.3 bits (51), Expect(4) = 2e-025
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 1116 PASPHWVPHEFFTIQ 1072
P SP P EFFTIQ
Sbjct: 427 PFSPQLFPQEFFTIQ 383
Score = 21.7 bits (41), Expect(4) = 2e-025
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1 / -3
Query: 1317 PRYSETQQQVVASGHEYSALHTL 1249
P S QQQV+ SG E HT+
Sbjct: 634 PPKSYMQQQVLLSGQE**LSHTV 566
>gb|CF398991.1|CF398991 RTDS3_11_H09.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_11_H09_A022 5', mRNA sequence
Length = 756
Score = 359 bits (779), Expect = 3e-098
Identities = 138/202 (68%), Positives = 165/202 (81%)
Frame = +2 / +1
Query: 536 GEQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQELIDCD 715
GE LP++VDWRE+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG+L SLSEQEL+DCD
Sbjct: 46 GENLPESVDWREKGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 225
Query: 716 KFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPI 895
+QGC+GGLMD AF F+I NGG+D+E DYP+ +DG+CD KN VV+IDS+E VP
Sbjct: 226 TSYNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPE 405
Query: 896 NYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYW 1075
N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+VGYGSE GKDYW
Sbjct: 406 NDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYW 585
Query: 1076 IVKNSWGTQWGEAGYVRMARNV 1141
IVKNSWG WGE G++R+ RN+
Sbjct: 586 IVKNSWGKSWGEKGFIRLQRNI 651
Score = 171 bits (367), Expect(2) = 3e-043
Identities = 85/159 (53%), Positives = 103/159 (64%)
Frame = -1 / -2
Query: 1014 VPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFFSLRS 835
VP + P+ *+WNA ASM L G CA AF + S GT S S+ TT FF S
Sbjct: 524 VPQVLVNTPDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFFR*AS 345
Query: 834 HVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPVTILL 655
+PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPVTI L
Sbjct: 344 QLPSLAM*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPVTI*L 165
Query: 654 IPSTAATAENAQHPPHWPWSLTSATAPRSRQSTASGSCS 538
+PSTAAT ENAQ P PWSLT+ATAP S QST SG S
Sbjct: 164 MPSTAATVENAQQLPQEPWSLTAATAPFSLQSTDSGKFS 48
Score = 106 bits (227), Expect = 4e-022
Identities = 55/164 (33%), Positives = 80/164 (48%)
Frame = -3 / -1
Query: 1030 TVVQVRPASPVEDARTVELERAPRCFNAGTNRLVRHGLLQRSLVVDGHTLERINGYNPCI 851
TV+Q+ A E AR V+LER F+ NRL+R GLLQR L+V H IN ++ I
Sbjct: 540 TVIQLSSAGACEHARFVKLERPSAGFDGNANRLMRRGLLQRLLIVLRHIFVAINCHHMGI 361
Query: 850 FQFEIARPVVASERVVGLGVDPAVLDHEHESXXXXXXXXXXXXXXXXVDKLLLRQRDEAA 671
F + +V RV+ L V P V+ + ES + + LL Q + A
Sbjct: 360 FSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHETAIASLVVRSIAIHQFLLGQGSQIA 181
Query: 670 CHDLVDPFHRCHRRERPAPTXXXXXXXXXXXXXXAPVHGVGELL 539
H+L+D F+ HRRERP + +PV+G+ ++L
Sbjct: 180 SHNLIDAFNSSHRRERPTTSAGALVLNSSHGSLFSPVNGLWQIL 49
Score = 26.3 bits (51), Expect(2) = 3e-043
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -2
Query: 1116 PASPHWVPHEFFTIQ 1072
P SP P EFFTIQ
Sbjct: 626 PFSPQLFPQEFFTIQ 582
>gb|CX650902.1|CX650902 COLD1_48_G09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_48_G09_A029 5', mRNA sequence
Length = 771
Score = 306 bits (663), Expect(2) = 2e-097
Identities = 118/175 (67%), Positives = 142/175 (81%)
Frame = +2 / +3
Query: 617 CWAFSAVAAVEGINKIVTGSLISLSEQELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDT 796
CWAFS VAAVEGIN+IVTG+L SLSEQEL+DCD +QGC+GGLMD AF F+I NGG+D+
Sbjct: 15 CWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDTSYNQGCNGGLMDYAFQFIIDNGGLDS 194
Query: 797 EADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQ 976
E DYP+ +DG+CD KN VV+IDS+E VP N E++L+KA AHQP+S +IEAS RAFQ
Sbjct: 195 EDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQ 374
Query: 977 LYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
Y SG+F CGT LDHGVT+VGYGSE GKDYWIVKNSWG WGE G++R+ RN+
Sbjct: 375 FYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 539
Score = 140 bits (301), Expect(2) = 3e-034
Identities = 70/136 (51%), Positives = 87/136 (63%)
Frame = -1 / -3
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS VP + P+ *+WNA ASM L G CA AF + S GT S S+ TT FF
Sbjct: 424 WSS*VPQVLVNTPDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFF 245
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
S +PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPV
Sbjct: 244 R*ASQLPSLAM*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPV 65
Query: 666 TILLIPSTAATAENAQ 619
TI L+PSTAAT ENAQ
Sbjct: 64 TI*LMPSTAATVENAQ 17
Score = 71.6 bits (150), Expect(2) = 2e-097
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +2 / +3
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCC 1366
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC
Sbjct: 657 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCC 770
Score = 26.3 bits (51), Expect(2) = 3e-034
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 1116 PASPHWVPHEFFTIQ 1072
P SP P EFFTIQ
Sbjct: 514 PFSPQLFPQEFFTIQ 470
>gb|DR012887.1|DR012887 HEAT1_15_D05.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_15_D05_A029 5', mRNA sequence
Length = 701
Score = 353 bits (765), Expect = 2e-096
Identities = 136/208 (65%), Positives = 164/208 (78%)
Frame = +2 / +2
Query: 518 RYLPLAGEQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQ 697
RY GE LP ++DWRE+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG LISLSEQ
Sbjct: 26 RYQYSDGEDLPKSIDWREKGAVAPVKDQGACGSCWAFSTVAAVEGINQIVTGDLISLSEQ 205
Query: 698 ELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDS 877
EL+DCD +QGC+GGLMD AF F+I NGG+D+E DYP+T +DG+CD KN VV+ID
Sbjct: 206 ELVDCDTSYNQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDD 385
Query: 878 FERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSE 1057
+E VP N E++L+KA A+QP+S +IEAS R FQ Y SG+F CGT LDHGVT+VGYGSE
Sbjct: 386 YEDVPENDEKSLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSE 565
Query: 1058 GGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
G DYWIVKNSWG WGE G++++ RN+
Sbjct: 566 SGTDYWIVKNSWGKSWGEEGFIKLQRNI 649
Score = 176 bits (379), Expect = 4e-043
Identities = 87/163 (53%), Positives = 102/163 (62%)
Frame = -1 / -3
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS +VP P+ *+WN+ ASM L G A AF N S GT S S+ TT FF
Sbjct: 534 WSSWVPQALVNTPDS*NWNSLPLASMATLIG*LAAAFFNDFSSFSGTSS*SSIVTTWAFF 355
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
SH PS V G*S+S+S PP ++N+KA S++PP PW +SQS SSCSDSE++ PV
Sbjct: 354 L*ASHDPS*AV*G*SSSLSSPPLFMINSKA*SMRPPLHPWL*EVSQSTSSCSDSEIKSPV 175
Query: 666 TILLIPSTAATAENAQHPPHWPWSLTSATAPRSRQSTASGSCS 538
TI LIPSTAAT ENAQ PH PWS T ATAP S QS G S
Sbjct: 174 TI*LIPSTAATVENAQQLPHAPWSFTGATAPFSLQSMDFGKSS 46
>gb|CF393744.1|CF393744 RTDS2_1_F11.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_1_F11_A021 3', mRNA sequence
Length = 756
Score = 334 bits (723), Expect(2) = 6e-096
Identities = 129/190 (67%), Positives = 154/190 (81%)
Frame = +2 / -1
Query: 572 RGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQELIDCDKFQDQGCDGGLM 751
+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG+L SLSEQEL+DCD +QGC+GGLM
Sbjct: 747 KGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDTSYNQGCNGGLM 568
Query: 752 DNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQKAVAH 931
D AF F+I NGG+D+E DYP+ +DG+CD KN VV+IDS+E VP N E++L+KA AH
Sbjct: 567 DYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDEKSLKKAAAH 388
Query: 932 QPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQWGE 1111
QP+S +IEAS RAFQ Y SG+F CGT LDHGVT+VGYGSE GKDYWIVKNSWG WGE
Sbjct: 387 QPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGKSWGE 208
Query: 1112 AGYVRMARNV 1141
G++R+ RN+
Sbjct: 207 KGFIRLQRNI 178
Score = 165 bits (354), Expect(2) = 2e-041
Identities = 80/151 (52%), Positives = 98/151 (64%)
Frame = -1 / +2
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS VP + P+ *+WNA ASM L G CA AF + S GT S S+ TT FF
Sbjct: 293 WSS*VPQVLVNTPDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFF 472
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
S +PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPV
Sbjct: 473 R*ASQLPSLAM*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPV 652
Query: 666 TILLIPSTAATAENAQHPPHWPWSLTSATAP 574
TI L+PSTAAT ENAQ P PWSLT+ATAP
Sbjct: 653 TI*LMPSTAATVENAQQLPQEPWSLTAATAP 745
Score = 39.1 bits (79), Expect(2) = 6e-096
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2 / -1
Query: 1253 VCNAEYSCPEATTCCCVSEY 1312
VC+ YSCPE+ TCCC+ ++
Sbjct: 60 VCDNYYSCPESNTCCCMYDF 1
Score = 26.3 bits (51), Expect(2) = 2e-041
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / +2
Query: 1116 PASPHWVPHEFFTIQ 1072
P SP P EFFTIQ
Sbjct: 203 PFSPQLFPQEFFTIQ 247
>gb|DR687672.1|DR687672 EST1077754 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABV23 3' end, mRNA sequence
Length = 788
Score = 332 bits (720), Expect(2) = 4e-095
Identities = 129/192 (67%), Positives = 153/192 (79%)
Frame = +2 / +2
Query: 566 RERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQELIDCDKFQDQGCDGG 745
RE+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG LISLSEQEL+DCD +QGC+GG
Sbjct: 2 REKGAVAPVKDQGACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCDTSYNQGCNGG 181
Query: 746 LMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQKAV 925
LMD AF F+I NGG+D+E DYP+T +DG+CD KN VV+ID +E VP N E +L+KA
Sbjct: 182 LMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPENDEESLKKAA 361
Query: 926 AHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQW 1105
A+QP+S +IEAS R FQ Y SG+F CGT LDHGVT+VGYGSE G DYWIVKNSWG W
Sbjct: 362 ANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSESGTDYWIVKNSWGKSW 541
Query: 1106 GEAGYVRMARNV 1141
GE GY+++ RN+
Sbjct: 542 GEEGYIKLQRNL 577
Score = 170 bits (366), Expect(2) = 1e-043
Identities = 83/153 (54%), Positives = 98/153 (64%)
Frame = -1 / -3
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS +VP P+ *+WN+ ASM L G A AF N S GT S S+ TT FF
Sbjct: 462 WSSWVPQALVNTPDS*NWNSLPLASMATLIG*LAAAFFNDSSSFSGTSS*SSIVTTWAFF 283
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
SH PS V G*S+S+S PP ++N+KA S++PP PW +SQS SSCSDSE++ PV
Sbjct: 282 L*ASHDPS*AV*G*SSSLSSPPLFMINSKA*SMRPPLHPWL*EVSQSTSSCSDSEIKSPV 103
Query: 666 TILLIPSTAATAENAQHPPHWPWSLTSATAPRS 568
TI LIPSTAAT ENAQ PH PWS T ATAP S
Sbjct: 102 TI*LIPSTAATVENAQQLPHAPWSFTGATAPFS 4
Score = 37.7 bits (76), Expect(2) = 4e-095
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2 / +2
Query: 1253 VCNAEYSCPEATTCCCVSEY 1312
VC+ YSCP++ TCCC+ ++
Sbjct: 695 VCDNYYSCPQSNTCCCMYDF 754
Score = 28.1 bits (55), Expect(2) = 1e-043
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / -3
Query: 1119 YPASPHWVPHEFFTIQ 1072
YP+SP P EF TIQ
Sbjct: 555 YPSSPQLFPQEFLTIQ 508
>gb|DT634371.1|DT634371 EST1149302 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG526 3' end, mRNA sequence
Length = 758
Score = 332 bits (720), Expect(2) = 1e-094
Identities = 129/192 (67%), Positives = 153/192 (79%)
Frame = +2 / +1
Query: 566 RERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQELIDCDKFQDQGCDGG 745
RE+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG LISLSEQEL+DCD +QGC+GG
Sbjct: 10 REKGAVAPVKDQGACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCDTSYNQGCNGG 189
Query: 746 LMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQKAV 925
LMD AF F+I NGG+D+E DYP+T +DG+CD KN VV+ID +E VP N E +L+KA
Sbjct: 190 LMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPENDEESLKKAA 369
Query: 926 AHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQW 1105
A+QP+S +IEAS R FQ Y SG+F CGT LDHGVT+VGYGSE G DYWIVKNSWG W
Sbjct: 370 ANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSESGTDYWIVKNSWGKSW 549
Query: 1106 GEAGYVRMARNV 1141
GE GY+++ RN+
Sbjct: 550 GEEGYIKLQRNL 585
Score = 170 bits (366), Expect(2) = 1e-043
Identities = 83/153 (54%), Positives = 98/153 (64%)
Frame = -1 / -1
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS +VP P+ *+WN+ ASM L G A AF N S GT S S+ TT FF
Sbjct: 470 WSSWVPQALVNTPDS*NWNSLPLASMATLIG*LAAAFFNDSSSFSGTSS*SSIVTTWAFF 291
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
SH PS V G*S+S+S PP ++N+KA S++PP PW +SQS SSCSDSE++ PV
Sbjct: 290 L*ASHDPS*AV*G*SSSLSSPPLFMINSKA*SMRPPLHPWL*EVSQSTSSCSDSEIKSPV 111
Query: 666 TILLIPSTAATAENAQHPPHWPWSLTSATAPRS 568
TI LIPSTAAT ENAQ PH PWS T ATAP S
Sbjct: 110 TI*LIPSTAATVENAQQLPHAPWSFTGATAPFS 12
Score = 36.3 bits (73), Expect(2) = 1e-094
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 1253 VCNAEYSCPEATTCCCV 1303
VC+ YSCP++ TCCC+
Sbjct: 703 VCDNYYSCPQSNTCCCM 753
Score = 28.1 bits (55), Expect(2) = 1e-043
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / -1
Query: 1119 YPASPHWVPHEFFTIQ 1072
YP+SP P EF TIQ
Sbjct: 563 YPSSPQLFPQEFLTIQ 516
>gb|CF393377.1|CF393377 RTDR3_20_F10.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_20_F10_A022 5', mRNA
sequence
Length = 754
Score = 318 bits (689), Expect(2) = 8e-093
Identities = 122/181 (67%), Positives = 146/181 (80%)
Frame = +2 / +3
Query: 599 QGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQELIDCDKFQDQGCDGGLMDNAFVFMIK 778
QG CG CWAFS VAAVEGIN+IVTG+L SLSEQEL+DCD +QGC+GGLMD AF F+I
Sbjct: 18 QGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDTSYNQGCNGGLMDYAFQFIID 197
Query: 779 NGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEA 958
NGG+D+E DYP+ +DG+CD KN VV+IDS+E VP N E++L+KA AHQP+S +IEA
Sbjct: 198 NGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAIEA 377
Query: 959 SRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARN 1138
S RAFQ Y SG+F CGT LDHGVT+VGYGSE GKDYWIVKNSWG WGE G++R+ RN
Sbjct: 378 SGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGKSWGEKGFIRLQRN 557
Query: 1139 V 1141
+
Sbjct: 558 I 560
Score = 144 bits (309), Expect(2) = 2e-035
Identities = 72/142 (50%), Positives = 89/142 (62%)
Frame = -1 / -1
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS VP + P+ *+WNA ASM L G CA AF + S GT S S+ TT FF
Sbjct: 445 WSS*VPQVLVNTPDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFF 266
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
S +PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPV
Sbjct: 265 R*ASQLPSLAM*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPV 86
Query: 666 TILLIPSTAATAENAQHPPHWP 601
TI L+PSTAAT ENAQ P P
Sbjct: 85 TI*LMPSTAATVENAQQLPQEP 20
Score = 44.1 bits (90), Expect(2) = 8e-093
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2 / +3
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKC 1324
VC+ YSCPE+ TCCC+ ++ G C
Sbjct: 678 VCDNYYSCPESNTCCCMYDFGGYC 749
Score = 26.3 bits (51), Expect(2) = 2e-035
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 1116 PASPHWVPHEFFTIQ 1072
P SP P EFFTIQ
Sbjct: 535 PFSPQLFPQEFFTIQ 491
>gb|DR693562.1|DR693562 EST1083651 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE096 3' end, mRNA sequence
Length = 749
Score = 174 bits (375), Expect(3) = 1e-091
Identities = 66/98 (67%), Positives = 79/98 (80%)
Frame = +2 / +3
Query: 848 KNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDH 1027
KN VV+IDS+E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDH
Sbjct: 195 KNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDH 374
Query: 1028 GVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
GVT+VGYGSE GKDYWIVKNSWG WGE G++R+ RN+
Sbjct: 375 GVTLVGYGSESGKDYWIVKNSWGKSWGEKGFIRLHRNI 488
Score = 108 bits (231), Expect(3) = 1e-091
Identities = 41/62 (66%), Positives = 52/62 (83%)
Frame = +2 / +1
Query: 653 INKIVTGSLISLSEQELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGT 832
IN+IVTG+L SLSEQEL+DCD +QGC+GGLMD AF F+I NGG+D+E DYP+ +DG+
Sbjct: 1 INQIVTGNLTSLSEQELVDCDTSYNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGS 180
Query: 833 CD 838
CD
Sbjct: 181 CD 186
Score = 94.5 bits (200), Expect(3) = 1e-091
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +2 / +3
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHD 1396
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D
Sbjct: 606 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPND 749
Score = 73.5 bits (154), Expect(3) = 6e-026
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = -1 / -1
Query: 837 SHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPVTI 661
S +PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPVTI
Sbjct: 185 SQLPSLAM*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPVTI 9
Score = 57.0 bits (118), Expect(3) = 6e-026
Identities = 29/62 (46%), Positives = 37/62 (59%)
Frame = -3 / -1
Query: 1030 TVVQVRPASPVEDARTVELERAPRCFNAGTNRLVRHGLLQRSLVVDGHTLERINGYNPCI 851
TVVQ+ A E AR V+LER F+ NRL+R GLLQR L+V H IN ++ I
Sbjct: 377 TVVQLSSAGTCEHARFVKLERPSAGFDGNANRLMRRGLLQRLLIVLRHIFVAINCHHMGI 198
Query: 850 FQ 845
F+
Sbjct: 197 FR 192
Score = 26.3 bits (51), Expect(3) = 6e-026
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -2
Query: 1116 PASPHWVPHEFFTIQ 1072
P SP P EFFTIQ
Sbjct: 463 PFSPQLFPQEFFTIQ 419
>gb|CV031915.1|CV031915 RTNACL1_4_C06.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_4_C06_A029 5', mRNA sequence
Length = 769
Score = 316 bits (684), Expect(3) = 8e-091
Identities = 125/188 (66%), Positives = 148/188 (78%)
Frame = +2 / +1
Query: 518 RYLPLAGEQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQ 697
RY GE LP ++DWRE+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG LISLSEQ
Sbjct: 205 RYQYSDGEDLPKSIDWREKGAVAPVKDQGACGSCWAFSTVAAVEGINQIVTGDLISLSEQ 384
Query: 698 ELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDS 877
EL+DCD +QGC+GGLMD AF F+I NGG+D+E DYP+T +DG+CD KN VV+ID
Sbjct: 385 ELVDCDTSYNQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDD 564
Query: 878 FERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSE 1057
+E VP N E++L+KA A+QP+S +IEAS R FQ Y SG+F CGT LDHGVT+VGYGSE
Sbjct: 565 YEDVPENDEKSLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSE 744
Query: 1058 GGKDYWIV 1081
G DYWIV
Sbjct: 745 SGTDYWIV 768
Score = 176 bits (379), Expect = 4e-043
Identities = 87/163 (53%), Positives = 102/163 (62%)
Frame = -1 / -3
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS +VP P+ *+WN+ ASM L G A AF N S GT S S+ TT FF
Sbjct: 713 WSSWVPQALVNTPDS*NWNSLPLASMATLIG*LAAAFFNDFSSFSGTSS*SSIVTTWAFF 534
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
SH PS V G*S+S+S PP ++N+KA S++PP PW +SQS SSCSDSE++ PV
Sbjct: 533 L*ASHDPS*AV*G*SSSLSSPPLFMINSKA*SMRPPLHPWL*EVSQSTSSCSDSEIKSPV 354
Query: 666 TILLIPSTAATAENAQHPPHWPWSLTSATAPRSRQSTASGSCS 538
TI LIPSTAAT ENAQ PH PWS T ATAP S QS G S
Sbjct: 353 TI*LIPSTAATVENAQQLPHAPWSFTGATAPFSLQSMDFGKSS 225
Score = 32.7 bits (65), Expect(3) = 8e-091
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2 / +1
Query: 380 EADAGLHGFRLGLTRFADLTLEEYRARLL 466
E + G ++LGL +FADL+ EE++A L
Sbjct: 70 EHNQGNRSYKLGLNQFADLSHEEFKATYL 156
Score = 26.3 bits (51), Expect(3) = 8e-091
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2 / +1
Query: 326 RRLEVFRDNLRYIDAHN 376
+R VF+DN YI HN
Sbjct: 28 KRFTVFKDNFLYIHEHN 78
>gb|CF392022.1|CF392022 RTDR3_12_H09.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_12_H09_A022 5', mRNA
sequence
Length = 775
Score = 229 bits (495), Expect(2) = 3e-090
Identities = 87/134 (64%), Positives = 106/134 (79%)
Frame = +2 / +1
Query: 740 GGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQK 919
GGLMD AF F+I NGG+D+E DYP+ +DG+CD KN VV+IDS+E VP N E++L+K
Sbjct: 1 GGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDEKSLKK 180
Query: 920 AVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGT 1099
A AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+VGYGSE GKDYWIVKNSWG
Sbjct: 181 AAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGK 360
Query: 1100 QWGEAGYVRMARNV 1141
WGE G++R+ RN+
Sbjct: 361 SWGEKGFIRLQRNI 402
Score = 124 bits (265), Expect(2) = 3e-090
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +2 / +1
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC + TC
Sbjct: 520 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 699
Query: 1433 KSANSPMMVKALQRKPA 1483
KS P K L+R PA
Sbjct: 700 KSRKDPFGTKMLKRTPA 750
>gb|CO165167.1|CO165167 FLD1_52_G05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_52_G05_A029 5', mRNA sequence
Length = 820
Score = 223 bits (482), Expect(2) = 2e-088
Identities = 84/134 (62%), Positives = 104/134 (77%)
Frame = +2 / +2
Query: 740 GGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQK 919
GGLMD AF F+I NGG+D+E DYP+T +DG+CD KN VV+ID +E VP N E++L+K
Sbjct: 8 GGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPENDEKSLKK 187
Query: 920 AVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGT 1099
A A+QP+S +IEAS R FQ Y SG+F CGT LDHGVT+VGYGSE G DYWIVKNSWG
Sbjct: 188 AAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSESGTDYWIVKNSWGK 367
Query: 1100 QWGEAGYVRMARNV 1141
WGE G++R+ RN+
Sbjct: 368 SWGEEGFIRLQRNI 409
Score = 124 bits (266), Expect(2) = 2e-088
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +2 / +2
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCP++ TCCC+ ++ G C A+GCC L++ATCC+DH SCCP +YPVC + GTC
Sbjct: 527 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLDSATCCDDHYSCCPSEYPVCDLDGGTCL 706
Query: 1433 KSANSPMMVKALQRKPA 1483
+S+ VK L+R PA
Sbjct: 707 QSSKDSFGVKMLKRTPA 757
>gb|CF394277.1|CF394277 RTDS2_4_A02.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_4_A02_A021 5', mRNA sequence
Length = 731
Score = 322 bits (697), Expect = 5e-087
Identities = 126/188 (67%), Positives = 150/188 (79%)
Frame = +2 / +1
Query: 572 RGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQELIDCDKFQDQGCDGGLM 751
+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG+L SLSEQEL+DCD +QGC+GGLM
Sbjct: 16 KGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDTSYNQGCNGGLM 195
Query: 752 DNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQKAVAH 931
D AF F+I NGG+D+E DYP+ +DG+CD KN VV+IDS+E VP N E++L+KA AH
Sbjct: 196 DYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDEKSLKKAAAH 375
Query: 932 QPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQWGE 1111
QP+S +IEAS RAFQ Y SG+F CGT LDHGVT+VGYGSE GKDYWIVKNSWG WG
Sbjct: 376 QPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGKSWGR 555
Query: 1112 AGYVRMAR 1135
G+ + A+
Sbjct: 556 EGFHQTAQ 579
Score = 165 bits (354), Expect(2) = 4e-041
Identities = 80/151 (52%), Positives = 98/151 (64%)
Frame = -1 / -1
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS VP + P+ *+WNA ASM L G CA AF + S GT S S+ TT FF
Sbjct: 470 WSS*VPQVLVNTPDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFF 291
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
S +PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPV
Sbjct: 290 R*ASQLPSLAM*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPV 111
Query: 666 TILLIPSTAATAENAQHPPHWPWSLTSATAP 574
TI L+PSTAAT ENAQ P PWSLT+ATAP
Sbjct: 110 TI*LMPSTAATVENAQQLPQEPWSLTAATAP 18
Score = 24.9 bits (48), Expect(2) = 4e-041
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 1116 PASPHWVPHEFFTIQ 1072
P+ P P EFFTIQ
Sbjct: 560 PSLPQLFPQEFFTIQ 516
>gb|CF402626.1|CF402626 RTWW1_21_D01.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_21_D01_A015 5', mRNA sequence
Length = 689
Score = 234 bits (506), Expect(2) = 8e-086
Identities = 89/138 (64%), Positives = 109/138 (78%)
Frame = +2 / +2
Query: 728 QGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYER 907
QGC+G LMD AF F+I NGG+D+E DYP+ +DG+CD KN VV+IDS+E VP N E+
Sbjct: 2 QGCNGCLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDEK 181
Query: 908 ALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKN 1087
+L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+VGYGSE GKDYWIVKN
Sbjct: 182 SLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKN 361
Query: 1088 SWGTQWGEAGYVRMARNV 1141
SWG WGE G++R+ RN+
Sbjct: 362 SWGKSWGEKGFIRLHRNI 415
Score = 104 bits (222), Expect(2) = 8e-086
Identities = 32/52 (61%), Positives = 42/52 (80%)
Frame = +2 / +2
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVC 1408
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC
Sbjct: 533 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVC 688
>gb|CF398001.1|CF398001 RTDS3_22_F03.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_22_F03_A022 3', mRNA sequence
Length = 744
Score = 278 bits (602), Expect(2) = 7e-085
Identities = 110/166 (66%), Positives = 132/166 (79%)
Frame = +2 / -3
Query: 635 VAAVEGINKIVTGSLISLSEQELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPF 814
VAAVEGIN+IVTG+L SLSEQEL+DCD +QGC+GGLMD AF F+I NGG+D+E DYP+
Sbjct: 739 VAAVEGINQIVTGNLTSLSEQELVDCDTSYNQGCNGGLMDYAFQFIIDNGGLDSEDDYPY 560
Query: 815 TGHDGTCDLKLKNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGI 994
+DG+CD KN VV+IDS+E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+
Sbjct: 559 MANDGSCDAYRKNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGV 380
Query: 995 FDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMA 1132
F CGT LDHGVT+VGYGSE GKDYWIVKNSWG WG G+ + A
Sbjct: 379 FTSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGKSWGREGFHQTA 242
Score = 131 bits (281), Expect(2) = 4e-031
Identities = 66/131 (50%), Positives = 83/131 (63%)
Frame = -1 / +3
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS VP + P+ *+WNA ASM L G CA AF + S GT S S+ TT FF
Sbjct: 348 WSS*VPQVLVNTPDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFF 527
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
S +PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPV
Sbjct: 528 R*ASQLPSLAM*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPV 707
Query: 666 TILLIPSTAAT 634
TI L+PSTAAT
Sbjct: 708 TI*LMPSTAAT 740
Score = 61.1 bits (127), Expect(2) = 7e-085
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +2 / -1
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENA 1357
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +A
Sbjct: 114 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSA 10
Score = 24.9 bits (48), Expect(2) = 4e-031
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / +3
Query: 1116 PASPHWVPHEFFTIQ 1072
P+ P P EFFTIQ
Sbjct: 258 PSLPQLFPQEFFTIQ 302
>gb|DT624915.1|DT624915 EST1159190 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAJ88 5' end, mRNA sequence
Length = 969
Score = 211 bits (455), Expect(2) = 1e-084
Identities = 79/123 (64%), Positives = 97/123 (78%)
Frame = +2 / +2
Query: 773 IKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQKAVAHQPVSASI 952
I NGG+D+E DYP+ +DG+CD KN VV+IDS+E VP N E++L+KA AHQP+S +I
Sbjct: 2 IDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAI 181
Query: 953 EASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMA 1132
EAS RAFQ Y SG+F CGT LDHGVT+VGYGSE GKDYWIVKNSWG WGE G++R+
Sbjct: 182 EASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGKSWGEKGFIRLQ 361
Query: 1133 RNV 1141
RN+
Sbjct: 362 RNI 370
Score = 124 bits (265), Expect(2) = 1e-084
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +2 / +2
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC + TC
Sbjct: 488 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 667
Query: 1433 KSANSPMMVKALQRKPA 1483
KS P K L+R PA
Sbjct: 668 KSRKDPFGTKMLKRTPA 718
>gb|CV143704.1|CV143704 EST854913 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPICW45 5' end, mRNA sequence
Length = 937
Score = 211 bits (455), Expect(2) = 1e-084
Identities = 79/123 (64%), Positives = 97/123 (78%)
Frame = +2 / +2
Query: 773 IKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQKAVAHQPVSASI 952
I NGG+D+E DYP+ +DG+CD KN VV+IDS+E VP N E++L+KA AHQP+S +I
Sbjct: 2 IDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAI 181
Query: 953 EASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMA 1132
EAS RAFQ Y SG+F CGT LDHGVT+VGYGSE GKDYWIVKNSWG WGE G++R+
Sbjct: 182 EASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGKSWGEKGFIRLQ 361
Query: 1133 RNV 1141
RN+
Sbjct: 362 RNI 370
Score = 124 bits (265), Expect(2) = 1e-084
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +2 / +2
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC + TC
Sbjct: 488 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 667
Query: 1433 KSANSPMMVKALQRKPA 1483
KS P K L+R PA
Sbjct: 668 KSRKDPFGTKMLKRTPA 718
>gb|CX652206.1|CX652206 COLD1_57_D09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_57_D09_A029 5', mRNA sequence
Length = 718
Score = 299 bits (647), Expect(2) = 2e-083
Identities = 119/178 (66%), Positives = 142/178 (79%)
Frame = +2 / +3
Query: 518 RYLPLAGEQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQ 697
RY GE LP++VDWRE+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG+L SLSEQ
Sbjct: 183 RYQYSEGENLPESVDWREKGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 362
Query: 698 ELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDS 877
EL+DCD +QGC+GGLMD AF F+I NGG+D+E DYP+ +DG+CD KN VV+IDS
Sbjct: 363 ELVDCDTSYNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDS 542
Query: 878 FERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYG 1051
+E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+VGYG
Sbjct: 543 YEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYG 716
Score = 175 bits (377), Expect = 8e-043
Identities = 87/163 (53%), Positives = 105/163 (64%)
Frame = -1 / -1
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS VP + P+ *+WNA ASM L G CA AF + S GT S S+ TT FF
Sbjct: 691 WSS*VPQVLVNTPDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFF 512
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
S +PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPV
Sbjct: 511 R*ASQLPSLAM*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPV 332
Query: 666 TILLIPSTAATAENAQHPPHWPWSLTSATAPRSRQSTASGSCS 538
TI L+PSTAAT ENAQ P PWSLT+ATAP S QST SG S
Sbjct: 331 TI*LMPSTAATVENAQQLPQEPWSLTAATAPFSLQSTDSGKFS 203
Score = 107 bits (228), Expect = 3e-022
Identities = 56/164 (34%), Positives = 80/164 (48%)
Frame = -3 / -3
Query: 1030 TVVQVRPASPVEDARTVELERAPRCFNAGTNRLVRHGLLQRSLVVDGHTLERINGYNPCI 851
TVVQ+ A E AR V+LER F+ NRL+R GLLQR L+V H IN ++ I
Sbjct: 695 TVVQLSSAGACEHARFVKLERPSAGFDGNANRLMRRGLLQRLLIVLRHIFVAINCHHMGI 516
Query: 850 FQFEIARPVVASERVVGLGVDPAVLDHEHESXXXXXXXXXXXXXXXXVDKLLLRQRDEAA 671
F + +V RV+ L V P V+ + ES + + LL Q + A
Sbjct: 515 FSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHETAIASLVVRSIAIHQFLLGQGSQIA 336
Query: 670 CHDLVDPFHRCHRRERPAPTXXXXXXXXXXXXXXAPVHGVGELL 539
H+L+D F+ HRRERP + +PV+G+ ++L
Sbjct: 335 SHNLIDAFNSSHRRERPTTSAGALVLNSSHGSLFSPVNGLWQIL 204
Score = 31.8 bits (63), Expect(2) = 2e-083
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2 / +3
Query: 392 GLHGFRLGLTRFADLTLEEYRARLL 466
G F+LGL +FADL+ EE++A L
Sbjct: 60 GNPSFKLGLNQFADLSHEEFKATYL 134
>gb|DR180554.1|DR180554 RTMNUT1_33_H11.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_33_H11_A029 3', mRNA sequence
Length = 832
Score = 284 bits (614), Expect(4) = 3e-083
Identities = 113/173 (65%), Positives = 135/173 (78%)
Frame = +2 / -3
Query: 518 RYLPLAGEQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQ 697
RY GE LP ++DWRE+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG LISLSEQ
Sbjct: 521 RYQYSDGEDLPKSIDWREKGAVAPVKDQGACGSCWAFSTVAAVEGINQIVTGDLISLSEQ 342
Query: 698 ELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDS 877
EL+DCD +QGC+GGLMD AF F+I NGG+D+E DYP+T +DG+CD KN VV+ID
Sbjct: 341 ELVDCDTSYNQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDD 162
Query: 878 FERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVT 1036
+E VP N E++L+KA A+QP+S +IEAS R FQ Y SG+F CGT LDHGVT
Sbjct: 161 YEDVPENDEKSLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVT 3
Score = 176 bits (379), Expect = 4e-043
Identities = 87/163 (53%), Positives = 102/163 (62%)
Frame = -1 / +1
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS +VP P+ *+WN+ ASM L G A AF N S GT S S+ TT FF
Sbjct: 13 WSSWVPQALVNTPDS*NWNSLPLASMATLIG*LAAAFFNDFSSFSGTSS*SSIVTTWAFF 192
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
SH PS V G*S+S+S PP ++N+KA S++PP PW +SQS SSCSDSE++ PV
Sbjct: 193 L*ASHDPS*AV*G*SSSLSSPPLFMINSKA*SMRPPLHPWL*EVSQSTSSCSDSEIKSPV 372
Query: 666 TILLIPSTAATAENAQHPPHWPWSLTSATAPRSRQSTASGSCS 538
TI LIPSTAAT ENAQ PH PWS T ATAP S QS G S
Sbjct: 373 TI*LIPSTAATVENAQQLPHAPWSFTGATAPFSLQSMDFGKSS 501
Score = 32.7 bits (65), Expect(4) = 3e-083
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2 / -3
Query: 380 EADAGLHGFRLGLTRFADLTLEEYRARLL 466
E + G ++LGL +FADL+ EE++A L
Sbjct: 656 EHNQGNRSYKLGLNQFADLSHEEFKATYL 570
Score = 26.3 bits (51), Expect(4) = 3e-083
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2 / -3
Query: 326 RRLEVFRDNLRYIDAHN 376
+R VF+DN YI HN
Sbjct: 698 KRFTVFKDNFLYIHEHN 648
Score = 25.4 bits (49), Expect(4) = 3e-083
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2 / -3
Query: 185 RTDEEVRRLYEEWRSEH 235
R D+ + LYE W +EH
Sbjct: 782 REDDAIMELYELWLAEH 732
>gb|CF668995.1|CF668995 RTCNT1_39_H10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_39_H10_A029 5', mRNA sequence
Length = 721
Score = 193 bits (416), Expect(2) = 2e-079
Identities = 72/112 (64%), Positives = 88/112 (78%)
Frame = +2 / +2
Query: 806 YPFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYS 985
YP+ +DG+CD KN VV+IDS+E VP N E++L+KA AHQP+S +IEAS RAFQ Y
Sbjct: 2 YPYMANDGSCDAYRKNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYE 181
Query: 986 SGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
SG+F CGT LDHGVT+VGYGSE GKDYWIVKNSWG WGE G++R+ RN+
Sbjct: 182 SGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 337
Score = 124 bits (265), Expect(2) = 2e-079
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +2 / +2
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC + TC
Sbjct: 455 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 634
Query: 1433 KSANSPMMVKALQRKPA 1483
KS P K L+R PA
Sbjct: 635 KSRKDPFGTKMLKRTPA 685
>gb|BX252311.1|BX252311 BX252311 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP062G03 similar to CYSTEINE PROTEINASE
PRECURSOR, mRNA sequence
Length = 716
Score = 190 bits (409), Expect(2) = 3e-079
Identities = 71/115 (61%), Positives = 88/115 (76%)
Frame = +2 / +2
Query: 797 EADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQ 976
E DYP+T +DG+CD KN VV+ID +E VP N E++L+KA A+QP+S +IEAS R FQ
Sbjct: 2 EEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPENDEKSLKKAAANQPISVAIEASGREFQ 181
Query: 977 LYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
Y SG+F CGT LDHGVT+VGYGSE G DYWIVKNSWG WGE G++R+ RN+
Sbjct: 182 FYESGVFTSACGTQLDHGVTLVGYGSESGTDYWIVKNSWGKSWGEEGFIRLQRNL 346
Score = 127 bits (271), Expect(2) = 3e-079
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = +2 / +2
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCP++ TCCC+ ++ G C A+GCC L++ATCC+DH SCCP +YPVC + GTC
Sbjct: 464 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLDSATCCDDHYSCCPSEYPVCDLDGGTCL 643
Query: 1433 KSANSPMMVKALQRKPA 1483
S P VK L+R PA
Sbjct: 644 XSXQDPFGVKMLKRTPA 694
>gb|CF385673.1|CF385673 RTDR1_5_B07.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_5_B07_A015 5', mRNA sequence
Length = 707
Score = 188 bits (406), Expect(2) = 6e-078
Identities = 71/111 (63%), Positives = 86/111 (77%)
Frame = +2 / +2
Query: 809 PFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSS 988
P+ +DG CD KN VV+IDS+E VP N E++L+KA AHQP+S +IEAS RAFQ Y S
Sbjct: 2 PYMANDGICDAYRKNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYES 181
Query: 989 GIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
G+F CGT LDHGVT+VGYGSE GKDYWIVKNSWG WGE G++R+ RN+
Sbjct: 182 GVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGKSWGEKGFIRLHRNI 334
Score = 124 bits (265), Expect(2) = 6e-078
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +2 / +2
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC + TC
Sbjct: 452 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 631
Query: 1433 KSANSPMMVKALQRKPA 1483
KS P K L+R PA
Sbjct: 632 KSRKDPFGTKMLKRTPA 682
>gb|CO164051.1|CO164051 FLD1_45_B05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_45_B05_A029 5', mRNA sequence
Length = 905
Score = 267 bits (578), Expect(3) = 2e-076
Identities = 107/165 (64%), Positives = 129/165 (78%)
Frame = +2 / +3
Query: 518 RYLPLAGEQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQ 697
RY GE LP++VDWRE+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG+L SLSEQ
Sbjct: 411 RY*YSEGENLPESVDWREKGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 590
Query: 698 ELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDS 877
EL+DCD +QGC+GGLMD AF F+I NGG+D+E DYP+ +DG+CD N VV+IDS
Sbjct: 591 ELVDCDTSYNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRXNAHVVTIDS 770
Query: 878 FERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCG 1012
+E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CG
Sbjct: 771 YEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFHSTCG 905
Score = 165 bits (354), Expect = 1e-039
Identities = 82/151 (54%), Positives = 99/151 (65%)
Frame = -1 / -2
Query: 990 PEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFFSLRSHVPSWPVN 811
P+ *+WNA ASM L G CA AF + S GT S S+ TT F S +PS +
Sbjct: 883 PDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFXR*ASQLPSLAM* 704
Query: 810 G*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPVTILLIPSTAATA 631
G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPVTI L+PSTAAT
Sbjct: 703 G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPVTI*LMPSTAATV 524
Query: 630 ENAQHPPHWPWSLTSATAPRSRQSTASGSCS 538
ENAQ P PWSLT+ATAP S QST SG S
Sbjct: 523 ENAQQLPQEPWSLTAATAPFSLQSTDSGKFS 431
Score = 31.8 bits (63), Expect(3) = 2e-076
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2 / +3
Query: 392 GLHGFRLGLTRFADLTLEEYRARLL 466
G F+LGL +FADL+ EE++A L
Sbjct: 288 GNPSFKLGLNQFADLSHEEFKATYL 362
Score = 27.2 bits (53), Expect(3) = 2e-076
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2 / +3
Query: 326 RRLEVFRDNLRYIDAHNAEAD 388
+R VF+DN YI HN + +
Sbjct: 231 KRFSVFKDNFLYIHQHNNQGN 293
>gb|CO364426.1|CO364426 RTK1_15_D07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_15_D07_A029 5', mRNA sequence
Length = 891
Score = 177 bits (380), Expect(2) = 2e-074
Identities = 67/108 (62%), Positives = 82/108 (75%)
Frame = +2 / +2
Query: 818 GHDGTCDLKLKNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIF 997
G DG+CD KN VV+ID +E VP N E++L+KA A+QP+S +IEAS R FQ Y SG+F
Sbjct: 8 GLDGSCDAYRKNAHVVTIDDYEDVPENDEKSLKKAAANQPISVAIEASGREFQFYESGVF 187
Query: 998 DGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
CGT LDHGVT+VGYGSE G DYWIVKNSWG WGE G++R+ RN+
Sbjct: 188 TSACGTQLDHGVTLVGYGSESGTDYWIVKNSWGKSWGEEGFIRLQRNI 331
Score = 124 bits (266), Expect(2) = 2e-074
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +2 / +2
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCP++ TCCC+ ++ G C A+GCC L++ATCC+DH SCCP +YPVC + GTC
Sbjct: 449 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLDSATCCDDHYSCCPSEYPVCDLDGGTCL 628
Query: 1433 KSANSPMMVKALQRKPA 1483
+S+ VK L+R PA
Sbjct: 629 QSSKDSFGVKMLKRTPA 679
>gb|DR022576.1|DR022576 STRS1_52_B04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_52_B04_A034 3', mRNA sequence
Length = 768
Score = 109 bits (233), Expect(4) = 4e-074
Identities = 45/66 (68%), Positives = 51/66 (77%)
Frame = +2 / +2
Query: 854 TRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGV 1033
T + ID FE VP+N E AL+KAVAHQPVS +IEAS R FQ YSSG+F G+CG LDHGV
Sbjct: 299 TTTMIIDGFEDVPVNNEAALKKAVAHQPVSVAIEASGRDFQFYSSGVFTGKCGNKLDHGV 478
Query: 1034 TVVGYG 1051
VVGYG
Sbjct: 479 VVVGYG 496
Score = 101 bits (216), Expect(4) = 4e-074
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = +2 / +2
Query: 560 DWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQELIDCDK 718
DWR++GAV VK+QGQCG CWAFS VA+VEGIN I TG L+SLSEQ+L+DC K
Sbjct: 2 DWRKKGAVTPVKNQGQCGSCWAFSTVASVEGINYIKTGKLVSLSEQQLVDCSK 160
Score = 67.5 bits (141), Expect(4) = 3e-030
Identities = 30/56 (53%), Positives = 35/56 (62%)
Frame = -1 / -1
Query: 726 SWNLSQSISSCSDSEMRLPVTILLIPSTAATAENAQHPPHWPWSLTSATAPRSRQS 559
+++L QS + CSD E PV I L+PST AT ENAQ PHWP T TAP QS
Sbjct: 168 AFSLLQSTNCCSDKETSFPVLI*LMPSTEATVENAQQLPHWP*FFTGVTAPFFLQS 1
Score = 67.0 bits (140), Expect(4) = 4e-074
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +2 / +2
Query: 1052 SEGGKDYWIVKNSWGTQWGEAGYVRMARNVRVRPPSAGIAMEPLY 1186
S G DYWIV+NSWG +WGE GY+RM R ++ GIAM+ Y
Sbjct: 500 SPEGIDYWIVRNSWGPKWGEKGYIRMQRGIKAVEGKCGIAMQASY 634
Score = 59.3 bits (123), Expect(4) = 4e-074
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +2 / +2
Query: 722 QDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTC 835
++ GC+GGLMDNAF ++I NGGI +EA+YP+T C
Sbjct: 161 ENAGCNGGLMDNAFQYIIDNGGIVSEAEYPYTAEAREC 274
Score = 49.6 bits (102), Expect(4) = 3e-030
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -1 / -1
Query: 1023 SRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFFS 844
S +PHLP P+ *+W +R ASM TG ATAF +A S L GT S S+ +V S
Sbjct: 468 SSLLPHLPVNTPDE*NWKSRPLASMATDTG**ATAFLSAASLLTGTSSKPSIIIVVVVDS 289
Query: 843 L 841
+
Sbjct: 288 I 286
Score = 37.7 bits (76), Expect(4) = 3e-030
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = -1 / -1
Query: 1173 MAMPALGGLTLTLRAIRTYPASPHWVPHEFFTIQ 1072
MA+P L R I YP SPH P EF TIQ
Sbjct: 621 MAIPHFPSTALIPRCILIYPFSPHLGPQEFLTIQ 520
Score = 34.1 bits (68), Expect(4) = 3e-030
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -1 / -1
Query: 810 G*SASVSIPPFLIMNTKALSIKPPSQP 730
G SAS++IPP ++ ALSI PP QP
Sbjct: 249 GYSASLTIPPLSMIY*NALSISPPLQP 169
>gb|CX652372.1|CX652372 COLD1_58_D08.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_58_D08_A029 5', mRNA sequence
Length = 667
Score = 265 bits (573), Expect(2) = 4e-073
Identities = 106/160 (66%), Positives = 128/160 (80%)
Frame = +2 / +1
Query: 518 RYLPLAGEQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQ 697
RY GE LP++VDWRE+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG+L SLSEQ
Sbjct: 181 RYQYSEGENLPESVDWREKGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 360
Query: 698 ELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDS 877
EL+DCD +QGC+GGLMD AF F+I NGG+D+E DYP+ +DG+CD KN VV+IDS
Sbjct: 361 ELVDCDTSYNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDS 540
Query: 878 FERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIF 997
+E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F
Sbjct: 541 YEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVF 660
Score = 168 bits (361), Expect = 1e-040
Identities = 83/151 (54%), Positives = 100/151 (66%)
Frame = -1 / -3
Query: 990 PEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFFSLRSHVPSWPVN 811
P+ *+WNA ASM L G CA AF + S GT S S+ TT FF S +PS +
Sbjct: 653 PDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFFR*ASQLPSLAM* 474
Query: 810 G*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPVTILLIPSTAATA 631
G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPVTI L+PSTAAT
Sbjct: 473 G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPVTI*LMPSTAATV 294
Query: 630 ENAQHPPHWPWSLTSATAPRSRQSTASGSCS 538
ENAQ P PWSLT+ATAP S QST SG S
Sbjct: 293 ENAQQLPQEPWSLTAATAPFSLQSTDSGKFS 201
Score = 31.8 bits (63), Expect(2) = 4e-073
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2 / +1
Query: 392 GLHGFRLGLTRFADLTLEEYRARLL 466
G F+LGL +FADL+ EE++A L
Sbjct: 58 GNPSFKLGLNQFADLSHEEFKATYL 132
>gb|CF401560.1|CF401560 RTWW1_13_C07.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_13_C07_A015 5', mRNA sequence
Length = 806
Score = 103 bits (219), Expect(6) = 1e-072
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = +2 / +3
Query: 548 PDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQELIDCD 715
P ++DWR++G V VKDQG CG CW+FS+ A+EGIN I TG LISLSEQEL+DCD
Sbjct: 228 PSSLDWRKKGVVTAVKDQGDCGSCWSFSSTGAIEGINAISTGDLISLSEQELVDCD 395
Score = 86.3 bits (182), Expect(6) = 1e-072
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = +2 / +3
Query: 725 DQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERV 889
++GCDGG MD AF ++I+NGGIDTEADYP+TG DGTC+ + +VV+ID + V
Sbjct: 402 NEGCDGGYMDYAFEWVIQNGGIDTEADYPYTGEDGTCNTTKEGYKVVTIDGYTDV 566
Score = 66.1 bits (138), Expect(6) = 1e-072
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = +2 / +3
Query: 1019 LDHGVTVVGYGSEGGKDYWIVKNSWGTQWGEAGY 1120
+DH V +VGY SE DYWIVKNSWGT WG GY
Sbjct: 702 IDHAVLIVGYSSEDDVDYWIVKNSWGTDWGLDGY 803
Score = 57.4 bits (119), Expect(4) = 2e-024
Identities = 29/57 (50%), Positives = 33/57 (57%)
Frame = -1 / -2
Query: 714 SQSISSCSDSEMRLPVTILLIPSTAATAENAQHPPHWPWSLTSATAPRSRQSTASGS 544
SQS +SCSD +R PV I LIPS A EN Q P P SLT+ T P QS G+
Sbjct: 394 SQSTNSCSDKLIRSPVDIALIPSIAPVDENDQQLPQSP*SLTAVTTPFFLQSRDEGA 224
Score = 52.8 bits (109), Expect(4) = 2e-024
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = -1 / -2
Query: 873 SMDTTLVFFSLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQP 730
SM TTL + VPS PV G*SASVS+PPF I ++ A SI PPS P
Sbjct: 550 SMVTTLYPSFVVLQVPSSPVYG*SASVSMPPFCITHSNA*SI*PPSHP 407
Score = 44.1 bits (90), Expect(6) = 1e-072
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2 / +3
Query: 902 ERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLD 1024
+ A+ AV QPVS ++ S FQLYS GI+DG C + D
Sbjct: 576 DAAVLCAVVQQPVSVGMDGSAIDFQLYSGGIYDGDCSSNPD 698
Score = 34.5 bits (69), Expect(6) = 1e-072
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2 / +3
Query: 326 RRLEVFRDNLRYIDAHN 376
+RLE+F+ NL YIDAHN
Sbjct: 12 KRLEIFKKNLDYIDAHN 62
Score = 34.5 bits (69), Expect(4) = 2e-024
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1 / -2
Query: 1119 YPASPHWVPHEFFTIQXXXXXXXXXXXXXXPWS 1021
YP+SP VPHEF TIQ WS
Sbjct: 802 YPSSPQSVPHEFLTIQ*STSSSEE*PTISTAWS 704
Score = 33.6 bits (67), Expect(6) = 1e-072
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 401 GFRLGLTRFADLTLEEYRA 457
G RLGL +FADLT EE++A
Sbjct: 93 GHRLGLNKFADLTNEEFKA 149
Score = 24.0 bits (46), Expect(4) = 2e-024
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1 / -2
Query: 1002 PSKMPEL*SWNARRDASMLALTGWCATAFCNALS 901
PS +P L*S + + S+ LTG TA A S
Sbjct: 676 PSYIPPL*S*KSMAEPSIPTLTGCWTTAHRTAAS 575
>gb|CF668432.1|CF668432 RTCNT1_36_A09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_A09_A029 5', mRNA sequence
Length = 774
Score = 170 bits (365), Expect(2) = 2e-072
Identities = 64/94 (68%), Positives = 77/94 (81%)
Frame = +2 / +3
Query: 860 VVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTV 1039
VV+IDS+E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+
Sbjct: 3 VVTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTL 182
Query: 1040 VGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
VGYGSE GKDYWIVKNSWG WGE G++R+ RN+
Sbjct: 183 VGYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 284
Score = 124 bits (265), Expect(2) = 2e-072
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +2 / +3
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC + TC
Sbjct: 402 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 581
Query: 1433 KSANSPMMVKALQRKPA 1483
KS P K L+R PA
Sbjct: 582 KSRKDPFGTKMLKRTPA 632
>gb|CF671372.1|CF671372 RTCNT1_56_D09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_56_D09_A029 5', mRNA sequence
Length = 676
Score = 170 bits (365), Expect(2) = 2e-072
Identities = 64/94 (68%), Positives = 77/94 (81%)
Frame = +2 / +3
Query: 860 VVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTV 1039
VV+IDS+E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+
Sbjct: 3 VVTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTL 182
Query: 1040 VGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
VGYGSE GKDYWIVKNSWG WGE G++R+ RN+
Sbjct: 183 VGYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 284
Score = 124 bits (265), Expect(2) = 2e-072
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +2 / +3
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC + TC
Sbjct: 402 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 581
Query: 1433 KSANSPMMVKALQRKPA 1483
KS P K L+R PA
Sbjct: 582 KSRKDPFGTKMLKRTPA 632
>gb|DR102486.1|DR102486 STRR1_81_B04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_81_B04_A033 5', mRNA sequence
Length = 621
Score = 271 bits (587), Expect = 8e-072
Identities = 104/159 (65%), Positives = 127/159 (79%)
Frame = +2 / +3
Query: 665 VTGSLISLSEQELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLK 844
VTG+L SLSEQEL+DCD +QGC+GGLMD AF F+I NGG+D+E DYP+ +DG+CD
Sbjct: 3 VTGNLTSLSEQELVDCDTSYNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAY 182
Query: 845 LKNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLD 1024
KN VV+IDS+E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LD
Sbjct: 183 RKNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLD 362
Query: 1025 HGVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
HGVT+VGYGSE GKDYWIVKNSWG WGE G++R+ RN+
Sbjct: 363 HGVTLVGYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 479
Score = 116 bits (247), Expect(2) = 6e-027
Identities = 58/121 (47%), Positives = 74/121 (61%)
Frame = -1 / -3
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS VP + P+ *+WNA ASM L G CA AF + S GT S S+ TT FF
Sbjct: 364 WSS*VPQVLVNTPDS*NWNALPLASMATLIG*CAAAFFSDFSSFSGTSS*LSIVTTWAFF 185
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
S +PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPV
Sbjct: 184 R*ASQLPSLAM*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPV 5
Query: 666 T 664
T
Sbjct: 4 T 2
Score = 26.3 bits (51), Expect(2) = 6e-027
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 1116 PASPHWVPHEFFTIQ 1072
P SP P EFFTIQ
Sbjct: 454 PFSPQLFPQEFFTIQ 410
>gb|CO167863.1|CO167863 FLD1_71_E11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_71_E11_A029 5', mRNA sequence
Length = 730
Score = 168 bits (361), Expect(2) = 8e-072
Identities = 63/93 (67%), Positives = 76/93 (81%)
Frame = +2 / +1
Query: 863 VSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVV 1042
V+IDS+E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+V
Sbjct: 4 VTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLV 183
Query: 1043 GYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
GYGSE GKDYWIVKNSWG WGE G++R+ RN+
Sbjct: 184 GYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 282
Score = 124 bits (265), Expect(2) = 8e-072
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +2 / +1
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC + TC
Sbjct: 400 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 579
Query: 1433 KSANSPMMVKALQRKPA 1483
KS P K L+R PA
Sbjct: 580 KSRKDPFGTKMLKRTPA 630
>gb|DR179208.1|DR179208 RTMNUT1_16_E04.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_16_E04_A029 5', mRNA sequence
Length = 723
Score = 111 bits (238), Expect(4) = 1e-070
Identities = 45/70 (64%), Positives = 55/70 (78%)
Frame = +2 / +1
Query: 842 KLKNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYL 1021
K+++T+ ID FE VP N E AL+KAVAHQPVS +IEAS + FQ YS+G+F G+CGT L
Sbjct: 439 KIESTKTTIIDGFEDVPANNEAALKKAVAHQPVSVAIEASGQDFQFYSTGVFTGKCGTKL 618
Query: 1022 DHGVTVVGYG 1051
DHGV VVGYG
Sbjct: 619 DHGVVVVGYG 648
Score = 108 bits (230), Expect(4) = 1e-070
Identities = 40/60 (66%), Positives = 50/60 (83%)
Frame = +2 / +1
Query: 539 EQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQELIDCDK 718
+ LP ++DWR++GAV VK+QGQCG CWAFS VA+VEGIN I TG L+SLSEQ+L+DC K
Sbjct: 136 KHLPASIDWRKKGAVTPVKNQGQCGSCWAFSTVASVEGINYIKTGKLVSLSEQQLVDCSK 315
Score = 73.5 bits (154), Expect(4) = 6e-030
Identities = 32/62 (51%), Positives = 38/62 (61%)
Frame = -1 / -2
Query: 726 SWNLSQSISSCSDSEMRLPVTILLIPSTAATAENAQHPPHWPWSLTSATAPRSRQSTASG 547
+++L QS + CSD E PV I L+PST AT ENAQ PHWP T TAP QS +G
Sbjct: 323 AFSLLQSTNCCSDKETSFPVLI*LMPSTEATVENAQQLPHWP*FFTGVTAPFFLQSIDAG 144
Query: 546 SC 541
C
Sbjct: 143 KC 138
Score = 57.9 bits (120), Expect(4) = 1e-070
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2 / +1
Query: 722 QDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTC 835
++ GC+GGLMDNAF ++I NGGI +E +YP+T C
Sbjct: 316 ENAGCNGGLMDNAFQYIIDNGGIVSEEEYPYTAEASEC 429
Score = 49.2 bits (101), Expect(4) = 6e-030
Identities = 27/58 (46%), Positives = 31/58 (53%)
Frame = -1 / -2
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLV 853
WS VPHLP P *+W + ASM TG ATAF +A S L GT S S+ V
Sbjct: 623 WSSLVPHLPVNTPVE*NWKS*PLASMATDTG**ATAFLSAASLLAGTSSKPSIIVVFV 450
Score = 47.8 bits (98), Expect(4) = 1e-070
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / +1
Query: 1052 SEGGKDYWIVKNSWGTQWGEAGYV 1123
S G +YWIV+NSWG +WGE GY+
Sbjct: 652 SPEGINYWIVRNSWGPEWGEKGYI 723
Score = 35.9 bits (72), Expect(4) = 6e-030
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -1 / -2
Query: 810 G*SASVSIPPFLIMNTKALSIKPPSQP 730
G S+S++IPP ++ KALSI PP QP
Sbjct: 404 GYSSSLTIPPLSMIYWKALSISPPLQP 324
Score = 29.0 bits (57), Expect(4) = 6e-030
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1 / -2
Query: 1119 YPASPHWVPHEFFTIQ 1072
YP SPH P EF TIQ
Sbjct: 719 YPFSPHSGPQEFLTIQ 672
>gb|CX714844.1|CX714844 RTPQ1_27_B02.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_27_B02_A032 5', mRNA sequence
Length = 725
Score = 163 bits (350), Expect(2) = 2e-070
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +2 / +1
Query: 848 KNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDH 1027
+N VV+ID +E VP N E++L+KA A+QP+S +IEAS R FQ Y SG+F CGT LDH
Sbjct: 1 ENAHVVTIDDYEDVPENDEKSLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDH 180
Query: 1028 GVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
GVT+VGYGSE G DYWIVKNSWG WGE G++R+ RN+
Sbjct: 181 GVTLVGYGSESGTDYWIVKNSWGKSWGEEGFIRLQRNI 294
Score = 124 bits (266), Expect(2) = 2e-070
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +2 / +1
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCP++ TCCC+ ++ G C A+GCC L++ATCC+DH SCCP +YPVC + GTC
Sbjct: 412 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLDSATCCDDHYSCCPSEYPVCDLDGGTCL 591
Query: 1433 KSANSPMMVKALQRKPA 1483
+S+ VK L+R PA
Sbjct: 592 QSSKDSFGVKMLKRTPA 642
>gb|DR019198.1|DR019198 STRS1_28_A04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_A04_A034 5', mRNA sequence
Length = 881
Score = 107 bits (229), Expect(4) = 6e-070
Identities = 38/60 (63%), Positives = 51/60 (85%)
Frame = +2 / +3
Query: 539 EQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQELIDCDK 718
+ LP+++DWRE+GAV VK+QGQCG CWAFS +A+VEGI+ + TG L+SLSEQ+L+DC K
Sbjct: 114 DNLPESIDWREKGAVNPVKNQGQCGSCWAFSTIASVEGISYLKTGKLVSLSEQQLVDCSK 293
Score = 98.2 bits (208), Expect(4) = 6e-070
Identities = 39/67 (58%), Positives = 47/67 (70%)
Frame = +2 / +3
Query: 851 NTRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHG 1030
N +ID FE VP N E+AL++AV HQPV+ +IEAS + FQ YS G+F G C T LDHG
Sbjct: 429 NAIAATIDGFEDVPANNEKALKEAVGHQPVAVAIEASGKDFQFYSKGVFTGECATELDHG 608
Query: 1031 VTVVGYG 1051
V VGYG
Sbjct: 609 VVAVGYG 629
Score = 74.8 bits (157), Expect(4) = 2e-029
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = -1 / -2
Query: 726 SWNLSQSISSCSDSEMRLPVTILLIPSTAATAENAQHPPHWPWSLTSATAPRSRQSTASG 547
+++L QS + CSD E PV L+PST A ENAQ PHWPW T TAP S QS SG
Sbjct: 301 AFSLLQSTNCCSDKETSFPVLR*LMPSTEAIVENAQQLPHWPWFFTGLTAPFSLQSIDSG 122
Query: 546 SCS 538
S
Sbjct: 121 RLS 113
Score = 63.4 bits (132), Expect(4) = 6e-070
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +2 / +3
Query: 1052 SEGGKDYWIVKNSWGTQWGEAGYVRMARNVRVRPPSAGIAMEPLY 1186
S G +YWIV+NSWG +WGE GY++M R++ GIAM+ Y
Sbjct: 633 SPEGINYWIVRNSWGPEWGEEGYIKMQRDIEAVEGKCGIAMQASY 767
Score = 54.2 bits (112), Expect(4) = 6e-070
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +2 / +3
Query: 722 QDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTC 835
++ GC+GGLMD+AF ++I NGG+ E +YP+T C
Sbjct: 294 ENAGCNGGLMDSAFQYIIDNGGVVAEDEYPYTAEASEC 407
Score = 40.9 bits (83), Expect(4) = 2e-029
Identities = 23/59 (38%), Positives = 27/59 (45%)
Frame = -1 / -2
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVF 850
WS V H P P *+ + ASM TGW TA A S L GT S S+ + F
Sbjct: 604 WSSSVAHSPVNTPFE*N*KSLPLASMATATGWWPTASLRAFSLLAGTSSKPSIVAAIAF 428
Score = 35.9 bits (72), Expect(4) = 2e-029
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1 / -2
Query: 1173 MAMPALGGLTLTLRAIRTYPASPHWVPHEFFTIQ 1072
MA+P R I YP+SPH P EF TIQ
Sbjct: 754 MAIPHFPSTASISRCIFIYPSSPHSGPQEFLTIQ 653
Score = 34.1 bits (68), Expect(4) = 2e-029
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1 / -2
Query: 816 VNG*SASVSIPPFLIMNTKALSIKPPSQP 730
V G S+S + PP ++ KALSI PP QP
Sbjct: 388 VYGYSSSATTPPLSMIYWKALSISPPLQP 302
>gb|DR177175.1|DR177175 RTMNUT1_3_C10.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_3_C10_A029 5', mRNA sequence
Length = 733
Score = 160 bits (343), Expect(2) = 2e-069
Identities = 60/94 (63%), Positives = 74/94 (78%)
Frame = +2 / +1
Query: 860 VVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTV 1039
VV+ID +E VP N E++L+KA A+QP+S +IEAS R FQ Y SG+F CGT LDHGVT+
Sbjct: 1 VVTIDDYEDVPENDEKSLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTL 180
Query: 1040 VGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNV 1141
VGYGSE G DYWIVKNSWG WGE G++R+ RN+
Sbjct: 181 VGYGSESGTDYWIVKNSWGKSWGEEGFIRLQRNI 282
Score = 124 bits (266), Expect(2) = 2e-069
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +2 / +1
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCP++ TCCC+ ++ G C A+GCC L++ATCC+DH SCCP +YPVC + GTC
Sbjct: 400 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLDSATCCDDHYSCCPSEYPVCDLDGGTCL 579
Query: 1433 KSANSPMMVKALQRKPA 1483
+S+ VK L+R PA
Sbjct: 580 QSSKDSFGVKMLKRTPA 630
>gb|BI643863.1|BI643863 NXPV_123_H11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_123_H11 5' similar to Arabidopsis
thaliana sequence At5g43060 cysteine protease component
of protease-inhibitor complex see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 492
Score = 262 bits (567), Expect = 5e-069
Identities = 104/163 (63%), Positives = 124/163 (76%)
Frame = +2 / +2
Query: 563 WRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQELIDCDKFQDQGCDG 742
WRE+GAVA VKDQG CG CWAFS VAAVEGIN+IVTG+L SLSEQEL+DCD +QGC+G
Sbjct: 2 WREKGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDTSYNQGCNG 181
Query: 743 GLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQKA 922
GLMD AF F+I NGG+D+E DYP+ +DG+CD KN VV+IDS+E VP N E++L+
Sbjct: 182 GLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDEKSLKXX 361
Query: 923 VAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYG 1051
AHQP +IEA RAFQ Y SG+F CGT LDH VT+ YG
Sbjct: 362 XAHQPXXVAIEAXXRAFQFYESGVFTSTCGTQLDHXVTLXXYG 490
Score = 160 bits (343), Expect = 4e-038
Identities = 79/155 (50%), Positives = 97/155 (62%)
Frame = -1 / -1
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS VP + P+ *+WNA ASM G CA + S GT S S+ TT FF
Sbjct: 465 WSS*VPQVLVNTPDS*NWNALXLASMATXIG*CAXXXFSDFSSFSGTSS*LSIVTTWAFF 286
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPV 667
S +PS + G*S+S+S PP ++N KA S++PP PW +SQS SSCSD E++LPV
Sbjct: 285 R*ASQLPSLAM*G*SSSLSSPPLSMINWKA*SMRPPLHPWL*EVSQSTSSCSDREVKLPV 106
Query: 666 TILLIPSTAATAENAQHPPHWPWSLTSATAPRSRQ 562
TI L+PSTAAT ENAQ P PWSLT+ATAP S Q
Sbjct: 105 TI*LMPSTAATVENAQQLPQEPWSLTAATAPFSLQ 1
>gb|DT626537.1|DT626537 EST1158461 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAB87 5' end, mRNA sequence
Length = 967
Score = 158 bits (339), Expect(2) = 9e-069
Identities = 59/87 (67%), Positives = 70/87 (80%)
Frame = +2 / +3
Query: 881 ERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEG 1060
E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+VGYGSE
Sbjct: 3 EDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 182
Query: 1061 GKDYWIVKNSWGTQWGEAGYVRMARNV 1141
GKDYWIVKNSWG WGE G++R+ RN+
Sbjct: 183 GKDYWIVKNSWGKSWGEKGFIRLQRNI 263
Score = 124 bits (265), Expect(2) = 9e-069
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +2 / +3
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC + TC
Sbjct: 381 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 560
Query: 1433 KSANSPMMVKALQRKPA 1483
KS P K L+R PA
Sbjct: 561 KSRKDPFGTKMLKRTPA 611
>gb|CV136191.1|CV136191 EST847400 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIA832 5' end, mRNA sequence
Length = 939
Score = 158 bits (339), Expect(2) = 9e-069
Identities = 59/87 (67%), Positives = 70/87 (80%)
Frame = +2 / +3
Query: 881 ERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEG 1060
E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+VGYGSE
Sbjct: 3 EDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 182
Query: 1061 GKDYWIVKNSWGTQWGEAGYVRMARNV 1141
GKDYWIVKNSWG WGE G++R+ RN+
Sbjct: 183 GKDYWIVKNSWGKSWGEKGFIRLQRNI 263
Score = 124 bits (265), Expect(2) = 9e-069
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +2 / +3
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC + TC
Sbjct: 381 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 560
Query: 1433 KSANSPMMVKALQRKPA 1483
KS P K L+R PA
Sbjct: 561 KSRKDPFGTKMLKRTPA 611
>gb|CF392425.1|CF392425 RTDR3_7_B09.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_7_B09_A022 5', mRNA sequence
Length = 618
Score = 221 bits (476), Expect(2) = 8e-068
Identities = 83/133 (62%), Positives = 103/133 (77%)
Frame = +2 / +3
Query: 743 GLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQKA 922
GLMD AF F+I NGG+D+E DYP+T +DG+CD KN VV+ID +E VP N E++L+KA
Sbjct: 3 GLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPENDEKSLKKA 182
Query: 923 VAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQ 1102
A+QP+S +IEAS R FQ Y SG+F CGT LDHGVT+VGYGSE G DYWIVKNSWG
Sbjct: 183 AANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSESGTDYWIVKNSWGKS 362
Query: 1103 WGEAGYVRMARNV 1141
WGE G++R+ RN+
Sbjct: 363 WGEEGFIRLQRNI 401
Score = 58.3 bits (121), Expect(2) = 8e-068
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +2 / +3
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELE 1351
VC+ YSCP++ TCCC+ ++ G C A+GCC L+
Sbjct: 519 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLD 617
>gb|DR110730.1|DR110730 RTS1_12_C12.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_12_C12_A029 5', mRNA sequence
Length = 848
Score = 93.6 bits (198), Expect(5) = 1e-067
Identities = 30/58 (51%), Positives = 33/58 (56%)
Frame = +2 / +1
Query: 1256 CNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTC 1429
C C TCCC+ E CL YGCCELENA CC CCP DYP+C + DG C
Sbjct: 673 CGGYSYCSSDETCCCIFELLDYCLIYGCCELENAVCCTGSIYCCPEDYPICDIEDGLC 846
Score = 86.3 bits (182), Expect(5) = 1e-067
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = +2 / +1
Query: 725 DQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERV 889
++GCDGG MD AF ++I+NGGIDTEADYP+TG DGTC+ + +VV+ID + V
Sbjct: 82 NEGCDGGYMDYAFEWVIQNGGIDTEADYPYTGEDGTCNTTKEGYKVVTIDGYTDV 246
Score = 70.3 bits (147), Expect(5) = 1e-067
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +2 / +1
Query: 1019 LDHGVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNVRV 1147
+DH V +VGY SE DYWIVKNSWGT WG GY + RN +
Sbjct: 382 IDHAVLIVGYSSEDDVDYWIVKNSWGTDWGLDGYFYIERNTDI 510
Score = 48.7 bits (100), Expect(5) = 1e-067
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2 / +1
Query: 641 AVEGINKIVTGSLISLSEQELIDCD 715
++EGIN I TG LISLSEQEL+DCD
Sbjct: 1 SIEGINAISTGDLISLSEQELVDCD 75
Score = 44.1 bits (90), Expect(5) = 1e-067
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2 / +1
Query: 902 ERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLD 1024
+ A+ AV QPVS ++ S FQLYS GI+DG C + D
Sbjct: 256 DAAVLCAVVQQPVSVGMDGSAIDFQLYSGGIYDGDCSSNPD 378
>gb|DR743712.1|DR743712 RTCU1_17_E09.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_17_E09_A029 5', mRNA sequence
Length = 863
Score = 154 bits (330), Expect(2) = 1e-067
Identities = 58/87 (66%), Positives = 69/87 (79%)
Frame = +2 / +3
Query: 881 ERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEG 1060
E VP N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+VGYGSE
Sbjct: 3 EDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 182
Query: 1061 GKDYWIVKNSWGTQWGEAGYVRMARNV 1141
G DYWIVKNSWG WGE G++R+ RN+
Sbjct: 183 G*DYWIVKNSWGKSWGEKGFIRLQRNI 263
Score = 124 bits (265), Expect(2) = 1e-067
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +2 / +3
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC + TC
Sbjct: 381 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 560
Query: 1433 KSANSPMMVKALQRKPA 1483
KS P K L+R PA
Sbjct: 561 KSRKDPFGTKMLKRTPA 611
>gb|CF402920.1|CF402920 RTWW1_23_E10.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_23_E10_A015 5', mRNA sequence
Length = 735
Score = 152 bits (327), Expect(2) = 4e-067
Identities = 56/82 (68%), Positives = 67/82 (81%)
Frame = +2 / +3
Query: 896 NYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYW 1075
N E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+VGYGSE GKDYW
Sbjct: 6 NDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYW 185
Query: 1076 IVKNSWGTQWGEAGYVRMARNV 1141
IVKNSWG WGE G++R+ RN+
Sbjct: 186 IVKNSWGKSWGEKGFIRLHRNI 251
Score = 124 bits (265), Expect(2) = 4e-067
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +2 / +3
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC + TC
Sbjct: 369 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 548
Query: 1433 KSANSPMMVKALQRKPA 1483
KS P K L+R PA
Sbjct: 549 KSRKDPFGTKMLKRTPA 599
>gb|CF390910.1|CF390910 RTDR3_2_D03.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_2_D03_A022 5', mRNA sequence
Length = 611
Score = 151 bits (325), Expect(2) = 7e-067
Identities = 55/80 (68%), Positives = 66/80 (82%)
Frame = +2 / +1
Query: 902 ERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIV 1081
E++L+KA AHQP+S +IEAS RAFQ Y SG+F CGT LDHGVT+VGYGSE GKDYWIV
Sbjct: 4 EKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIV 183
Query: 1082 KNSWGTQWGEAGYVRMARNV 1141
KNSWG WGE G++R+ RN+
Sbjct: 184 KNSWGKSWGEKGFIRLQRNI 243
Score = 124 bits (265), Expect(2) = 7e-067
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +2 / +1
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
VC+ YSCPE+ TCCC+ ++ G C A+GCC L +ATCC+DH SCCP+D+PVC + TC
Sbjct: 361 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 540
Query: 1433 KSANSPMMVKALQRKPA 1483
KS P K L+R PA
Sbjct: 541 KSRKDPFGTKMLKRTPA 591
>gb|DR069530.1|DR069530 RTDK1_7_F12.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_7_F12_A029 5', mRNA sequence
Length = 816
Score = 193 bits (415), Expect(2) = 4e-066
Identities = 76/137 (55%), Positives = 94/137 (68%)
Frame = +2 / -3
Query: 725 DQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYE 904
+QGC+GGLMD AF ++IKN GI TEA+Y +T DG C+ ++ +I S++ V N E
Sbjct: 667 NQGCNGGLMDYAFEYIIKNKGITTEANYAYTARDGVCNRSKASSAAATITSYKDVTHNSE 488
Query: 905 RALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVK 1084
L+ AV QPVS +IEA + FQ Y SGIF G CGT LDHGV VGYG+EG DYWIVK
Sbjct: 487 AQLKAAVTQQPVSVAIEADQSGFQFYKSGIFSGPCGTQLDHGVLAVGYGTEGTTDYWIVK 308
Query: 1085 NSWGTQWGEAGYVRMAR 1135
NSWG WG GY+ MA+
Sbjct: 307 NSWGVSWGSQGYILMAQ 257
Score = 81.7 bits (172), Expect(3) = 5e-032
Identities = 48/111 (43%), Positives = 58/111 (52%)
Frame = -1 / +3
Query: 1026 WSRYVPHLPSKMPEL*SWNARRDASMLALTGWCATAFCNALS*LMGTRSNESMDTTLVFF 847
WS +VP P KMP+L*+W ASM TG TA + S L T E M
Sbjct: 366 WSSWVPQGPEKMPDL*NWKPDWSASMATETGCWVTAALS*ASELWVTSL*EVMVAAAEEA 545
Query: 846 SLRSHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSC 694
LR PS V * ASV IP FL+M +KA SI+PP QPW + + +SC
Sbjct: 546 LLRLQTPSRAV*A*LASVVIPLFLMMYSKA*SIRPPLQPWLPSEPEQSTSC 698
Score = 80.8 bits (170), Expect(2) = 4e-066
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +2 / -3
Query: 581 VAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQELIDC 712
V VKDQGQCG CWAFS +VEG ++I TGSL+SLSEQ+L+DC
Sbjct: 814 VTPVKDQGQCGSCWAFSTTGSVEGAHQIKTGSLVSLSEQQLVDC 683
Score = 67.5 bits (141), Expect(3) = 5e-032
Identities = 27/44 (61%), Positives = 27/44 (61%)
Frame = -1 / +3
Query: 711 QSISSCSDSEMRLPVTILLIPSTAATAENAQHPPHWPWSLTSAT 580
QS S CSD E R PV I PST E AQH PHWPWSLT T
Sbjct: 684 QSTSCCSDRETREPVLIWWAPSTEPVVEKAQHEPHWPWSLTGVT 815
Score = 28.1 bits (55), Expect(3) = 5e-032
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1 / +3
Query: 1131 AIRTYPASPHWVPHEFFTIQ 1072
AIR P P PHEF TIQ
Sbjct: 261 AIRM*P*EPQETPHEFLTIQ 320
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 615,160,306
Number of Sequences: 355925
Number of extensions: 7211913
Number of successful extensions: 55611
Number of sequences better than 1.0e-020: 660
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 28305482940
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)