TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 7297169.2.1
(545 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX249681.1|BX249681 BX249681 Pinus pinaster differenciat... 246 2e-078
gb|DN455969.1|DN455969 EST951768 Sequencing ESTs from loblo... 246 5e-078
gb|CF386604.1|CF386604 RTDR1_15_E07.g1_A015 Loblolly pine r... 246 6e-078
gb|DN458466.1|DN458466 EST954265 Sequencing ESTs from loblo... 246 2e-076
gb|DR692783.1|DR692783 EST1082871 Normalized pine embryo li... 243 5e-076
gb|BX677610.1|BX677610 BX677610 RN Pinus pinaster cDNA clon... 247 2e-074
gb|CV147000.1|CV147000 EST858209 Sequencing ESTs from loblo... 232 9e-072
gb|DT625286.1|DT625286 EST1159561 Sequencing ESTs from lobl... 232 9e-072
gb|DN445702.1|DN445702 EST941501 Sequencing ESTs from loblo... 232 9e-072
gb|DN462084.1|DN462084 EST957883 Sequencing ESTs from loblo... 232 9e-072
gb|DN452691.1|DN452691 EST948490 Sequencing ESTs from loblo... 232 9e-072
gb|DN449602.1|DN449602 EST945401 Sequencing ESTs from loblo... 245 3e-071
gb|DR059573.1|DR059573 RTNIT1_18_B04.g1_A029 Roots minus ni... 233 9e-069
gb|CF671984.1|CF671984 RTCNT1_60_C05.g1_A029 Root control P... 233 9e-069
gb|CF671976.1|CF671976 RTCNT1_60_B05.g1_A029 Root control P... 233 9e-069
gb|CO362216.1|CO362216 RTK1_2_D03.b1_A029 Roots minus potas... 233 9e-069
gb|CV031466.1|CV031466 RTNACL1_1_F03.g1_A029 Roots plus add... 233 9e-069
gb|DN453469.1|DN453469 EST949268 Sequencing ESTs from loblo... 245 8e-068
gb|CV146360.1|CV146360 EST857569 Sequencing ESTs from loblo... 213 3e-067
gb|DN456576.1|DN456576 EST952375 Sequencing ESTs from loblo... 215 1e-066
gb|CF396374.1|CF396374 RTDS2_21_H10.g1_A021 Drought-stresse... 232 2e-066
gb|DR689559.1|DR689559 EST1079645 Normalized pine embryo li... 213 2e-066
gb|CF390508.1|CF390508 RTDR2_19_F07.g1_A021 Loblolly pine r... 225 9e-066
gb|DR099303.1|DR099303 STRR1_54_C10.g1_A033 Stem Response R... 144 1e-065
gb|DR058926.1|DR058926 RTNIT1_14_E08.g1_A029 Roots minus ni... 233 8e-065
gb|DN464364.1|DN464364 EST960163 Sequencing ESTs from loblo... 246 8e-065
gb|DR019118.1|DR019118 STRS1_27_H10.g1_A034 Shoot tip pitch... 246 8e-065
gb|DR117877.1|DR117877 RTMG1_9_F09.g1_A029 Roots minus magn... 219 1e-064
gb|CF668754.1|CF668754 RTCNT1_38_A12.g1_A029 Root control P... 219 2e-064
gb|CO200548.1|CO200548 GEO2_8_C10.b1_A032 Root gravitropism... 232 7e-064
gb|CO200952.1|CO200952 RTCNT2_2_D10.g1_A029 Root control 2 ... 219 2e-063
gb|CN783734.1|CN783734 EST782425 Sequencing ESTs from loblo... 240 5e-063
gb|DT625556.1|DT625556 EST1157480 Sequencing ESTs from lobl... 240 5e-063
gb|CX648612.1|CX648612 COLD1_29_F08.g1_A029 Root cold Pinus... 201 2e-062
gb|DR120066.1|DR120066 RTMG1_27_G08.b1_A029 Roots minus mag... 229 2e-062
gb|CF668950.1|CF668950 RTCNT1_39_D10.g1_A029 Root control P... 142 6e-062
gb|CF478889.1|CF478889 RTWW3_15_G12.g1_A022 Well-watered lo... 233 6e-062
gb|BX676995.1|BX676995 BX676995 RN Pinus pinaster cDNA clon... 217 8e-062
gb|DN448826.1|DN448826 EST944625 Sequencing ESTs from loblo... 232 2e-061
gb|DN465331.1|DN465331 EST961130 Sequencing ESTs from loblo... 232 2e-061
gb|CO364097.1|CO364097 RTK1_13_E05.g1_A029 Roots minus pota... 233 5e-061
gb|CO364241.1|CO364241 RTK1_14_C02.g1_A029 Roots minus pota... 233 5e-061
gb|CF666491.1|CF666491 RTCNT1_23_E05.g1_A029 Root control P... 195 1e-060
gb|CF479066.1|CF479066 RTWW3_21_B04.g1_A022 Well-watered lo... 232 2e-060
gb|DR047483.1|DR047483 RTBOR1_1_G09.b1_A029 Roots plus adde... 232 2e-060
gb|CF471972.1|CF471972 RTDS1_7_G09.g1_A015 Drought-stressed... 191 9e-060
gb|DN456270.1|DN456270 EST952069 Sequencing ESTs from loblo... 183 4e-059
gb|CV135535.1|CV135535 EST846744 Sequencing ESTs from loblo... 226 1e-058
gb|DR090705.1|DR090705 RTAL1_16_H03.g1_A029 Roots plus adde... 198 3e-058
gb|DR118515.1|DR118515 RTMG1_17_B05.g1_A029 Roots minus mag... 224 4e-058
gb|DN459174.1|DN459174 EST954973 Sequencing ESTs from loblo... 219 1e-056
gb|DT626828.1|DT626828 EST1159904 Sequencing ESTs from lobl... 219 1e-056
gb|CO165989.1|CO165989 FLD1_58_C01.g1_A029 Root flooded Pin... 218 2e-056
gb|DR019144.1|DR019144 STRS1_28_C06.b2_A034 Shoot tip pitch... 217 3e-056
gb|BE761954.1|BE761954 NXCI_075_C02_F NXCI (Nsf Xylem Compr... 215 2e-055
gb|CV144450.1|CV144450 EST855659 Sequencing ESTs from loblo... 214 4e-055
gb|CF472606.1|CF472606 RTDS1_10_A01.g1_A015 Drought-stresse... 212 1e-054
gb|AL750341.1|AL750341 AL750341 RN Pinus pinaster cDNA clon... 182 2e-054
gb|CO201426.1|CO201426 RTCNT2_5_E08.g1_A029 Root control 2 ... 211 3e-054
gb|CF391231.1|CF391231 RTDR3_4_D04.g1_A022 Loblolly pine ro... 173 3e-054
gb|DR080121.1|DR080121 RTFEPL1_20_A04.g1_A029 Roots plus ad... 207 4e-053
gb|DR078763.1|DR078763 RTFEPL1_6_E08.g1_A029 Roots plus add... 207 7e-053
gb|DR161068.1|DR161068 RTFE1_9_D12.g1_A029 Roots minus iron... 207 7e-053
gb|BX677329.1|BX677329 BX677329 RN Pinus pinaster cDNA clon... 182 2e-052
gb|DN453349.1|DN453349 EST949148 Sequencing ESTs from loblo... 204 4e-052
gb|DT625257.1|DT625257 EST1159532 Sequencing ESTs from lobl... 204 4e-052
gb|DN456450.1|DN456450 EST952249 Sequencing ESTs from loblo... 202 2e-051
gb|DR016104.1|DR016104 STRS1_7_E06.g1_A034 Shoot tip pitch ... 179 3e-051
gb|CV034369.1|CV034369 RTNACL1_40_B05.g1_A029 Roots plus ad... 179 3e-051
gb|CF401715.1|CF401715 RTWW1_14_H03.g1_A015 Well-watered lo... 200 6e-051
gb|CO366233.1|CO366233 RTK1_26_D11.g1_A029 Roots minus pota... 176 8e-051
gb|CF385188.1|CF385188 RTDR1_2_B01.g1_A015 Loblolly pine ro... 176 8e-051
gb|CX714982.1|CX714982 RTPQ1_28_H08.g1_A032 Roots treated w... 179 1e-050
gb|DR020823.1|DR020823 STRS1_39_B06.g1_A034 Shoot tip pitch... 195 2e-049
gb|BQ696489.1|BQ696489 NXPV_041_H06_F NXPV (Nsf Xylem Plani... 160 7e-049
gb|DR102107.1|DR102107 STRR1_78_B06.g1_A033 Stem Response R... 143 9e-049
gb|CO199488.1|CO199488 GEO2_1_C04.g1_A032 Root gravitropism... 155 3e-047
gb|DN463837.1|DN463837 EST959636 Sequencing ESTs from loblo... 186 7e-047
gb|BF609939.1|BF609939 NXSI_052_G09_F NXSI (Nsf Xylem Side ... 184 4e-046
gb|CF665700.1|CF665700 RTCNT1_17_H05.g1_A029 Root control P... 181 3e-045
gb|AI812451.1|AI812451 11C12 Pine Lambda Zap Xylem library ... 168 3e-045
gb|CX712470.1|CX712470 RTPQ1_2_E10.g2_A032 Roots treated wi... 179 1e-044
gb|DR048100.1|DR048100 RTBOR1_6_D02.g2_A029 Roots plus adde... 179 2e-044
gb|DR177651.1|DR177651 RTMNUT1_6_C11.g1_A029 Roots minus mi... 178 2e-044
gb|CF391866.1|CF391866 RTDR3_10_D08.g1_A022 Loblolly pine r... 176 1e-043
gb|CF668476.1|CF668476 RTCNT1_36_F01.g1_A029 Root control P... 176 1e-043
gb|DR163979.1|DR163979 RTFE1_46_D01.b1_A029 Roots minus iro... 175 3e-043
gb|BF220706.1|BF220706 NXCI_149_F02_F NXCI (Nsf Xylem Compr... 174 5e-043
gb|DR384606.1|DR384606 RTHG1_3_H01.b1_A029 Roots plus added... 149 7e-043
gb|DR119340.1|DR119340 RTMG1_22_D09.g1_A029 Roots minus mag... 143 9e-043
gb|CX715053.1|CX715053 RTPQ1_30_C10.g1_A032 Roots treated w... 126 3e-042
gb|AI812405.1|AI812405 10A4 Pine Lambda Zap Xylem library P... 101 4e-042
gb|CF667362.1|CF667362 RTCNT1_29_E11.g1_A029 Root control P... 146 2e-041
gb|BE643663.1|BE643663 NXCI_041_D06_F NXCI (Nsf Xylem Compr... 165 2e-040
gb|DN452433.1|DN452433 EST948232 Sequencing ESTs from loblo... 165 3e-040
gb|BF777210.1|BF777210 NXSI_066_E06_F NXSI (Nsf Xylem Side ... 164 5e-040
gb|BQ701630.1|BQ701630 NXSI_111_G09_F NXSI (Nsf Xylem Side ... 164 5e-040
gb|BM366983.1|BM366983 NXLV_043_A09_F NXLV (Nsf Xylem Late ... 142 6e-040
gb|BG275569.1|BG275569 NXSI_143_D05_F NXSI (Nsf Xylem Side ... 119 2e-038
gb|DR119535.1|DR119535 RTMG1_23_G10.g1_A029 Roots minus mag... 156 1e-037
gb|BF610596.1|BF610596 NXSI_060_E03_F NXSI (Nsf Xylem Side ... 155 2e-037
gb|BG040873.1|BG040873 NXSI_116_B09_F NXSI (Nsf Xylem Side ... 155 3e-037
gb|BQ703203.1|BQ703203 NXSI_137_H05_F NXSI (Nsf Xylem Side ... 155 3e-037
gb|CO199814.1|CO199814 GEO2_3_D09.g1_A032 Root gravitropism... 154 5e-037
gb|CF401023.1|CF401023 RTWW1_9_G01.g1_A015 Well-watered lob... 150 7e-036
gb|BF777208.1|BF777208 NXSI_066_E04_F NXSI (Nsf Xylem Side ... 109 3e-035
gb|BE657104.1|BE657104 NXCI_042_G04_F NXCI (Nsf Xylem Compr... 147 6e-035
gb|CF389132.1|CF389132 RTDR2_13_C04.g1_A021 Loblolly pine r... 145 2e-034
gb|CO411566.1|CO411566 EST841951 Sequencing ESTs from loblo... 141 3e-033
gb|CO412398.1|CO412398 EST842783 Sequencing ESTs from loblo... 141 3e-033
gb|CO414603.1|CO414603 EST844988 Sequencing ESTs from loblo... 141 3e-033
gb|DN447351.1|DN447351 EST943150 Sequencing ESTs from loblo... 141 3e-033
gb|CO364442.1|CO364442 RTK1_15_F01.g1_A029 Roots minus pota... 140 5e-033
gb|CF386300.1|CF386300 RTDR1_13_C09.g1_A015 Loblolly pine r... 125 5e-033
gb|CF400015.1|CF400015 RTWW1_2_G10.g1_A015 Well-watered lob... 125 5e-033
gb|CF402278.1|CF402278 RTWW1_19_F05.g1_A015 Well-watered lo... 125 5e-033
gb|DR051684.1|DR051684 RTBOR1_31_E08.g1_A029 Roots plus add... 118 5e-033
gb|CF664189.1|CF664189 RTCNT1_8_B09.b1_A029 Root control Pi... 125 7e-033
gb|BF221412.1|BF221412 NXCI_165_D09_F NXCI (Nsf Xylem Compr... 139 1e-032
gb|DR098781.1|DR098781 STRR1_47_G04.g1_A033 Stem Response R... 124 1e-032
gb|CF387444.1|CF387444 RTDR1_20_A05.b1_A015 Loblolly pine r... 124 1e-032
gb|BE643830.1|BE643830 NXCI_047_G08_F NXCI (Nsf Xylem Compr... 138 3e-032
gb|DN463937.1|DN463937 EST959736 Sequencing ESTs from loblo... 117 3e-032
gb|DT627466.1|DT627466 EST1160542 Sequencing ESTs from lobl... 117 3e-032
gb|DR023735.1|DR023735 STRS1_59_E06.g1_A034 Shoot tip pitch... 124 1e-031
gb|CO366882.1|CO366882 RTK1_30_F03.g1_A029 Roots minus pota... 93 2e-031
gb|DR024646.1|DR024646 STRS1_66_A11.g1_A034 Shoot tip pitch... 72 5e-031
gb|DR058581.1|DR058581 RTNIT1_12_E04.g1_A029 Roots minus ni... 73 7e-031
gb|CF392543.1|CF392543 RTDR3_6_C10.g1_A022 Loblolly pine ro... 72 1e-030
gb|CO162753.1|CO162753 FLD1_37_G03.b1_A029 Root flooded Pin... 132 2e-030
gb|DR080589.1|DR080589 RTFEPL1_23_F08.g1_A029 Roots plus ad... 71 2e-030
gb|DR055439.1|DR055439 RTCA1_23_E06.g2_A029 Roots minus cal... 84 2e-029
gb|DT627785.1|DT627785 EST1156534 Subtracted pine embryo li... 101 2e-029
gb|DR019221.1|DR019221 STRS1_28_C06.g1_A034 Shoot tip pitch... 128 3e-029
gb|CO162849.1|CO162849 FLD1_37_H04.g1_A029 Root flooded Pin... 72 3e-029
gb|BG317762.1|BG317762 NXPV_005_D09_F NXPV (Nsf Xylem Plani... 72 4e-029
gb|CO160856.1|CO160856 FLD1_25_C07.b1_A029 Root flooded Pin... 70 6e-029
gb|CO163325.1|CO163325 FLD1_40_H02.g1_A029 Root flooded Pin... 70 6e-029
gb|CX651184.1|CX651184 COLD1_50_E10.g1_A029 Root cold Pinus... 73 6e-029
gb|DT630932.1|DT630932 EST1145863 Normalized pine embryo li... 70 6e-029
gb|CO162635.1|CO162635 FLD1_36_C03.g1_A029 Root flooded Pin... 70 6e-029
gb|CO363291.1|CO363291 RTK1_8_G03.g1_A029 Roots minus potas... 127 7e-029
gb|CV034358.1|CV034358 RTNACL1_40_A03.g1_A029 Roots plus ad... 73 8e-029
gb|DR089089.1|DR089089 RTAL1_6_B01.g1_A029 Roots plus added... 73 8e-029
gb|DR091346.1|DR091346 RTAL1_21_A11.b1_A029 Roots plus adde... 71 1e-028
gb|CO362446.1|CO362446 RTK1_3_C09.g1_A029 Roots minus potas... 71 1e-028
gb|DR051365.1|DR051365 RTBOR1_29_C09.g1_A029 Roots plus add... 71 1e-028
gb|CO157698.1|CO157698 FLD1_1_A11.g1_A029 Root flooded Pinu... 71 1e-028
gb|CO158417.1|CO158417 FLD1_6_F08.g1_A029 Root flooded Pinu... 73 1e-028
gb|CO199241.1|CO199241 GEO1_19_F11.g1_A029 Root gravitropis... 73 1e-028
gb|DR089726.1|DR089726 RTAL1_10_A06.g1_A029 Roots plus adde... 71 1e-028
gb|DR742929.1|DR742929 RTCU1_7_H12.g2_A029 Roots plus added... 73 1e-028
gb|CF391252.1|CF391252 RTDR3_4_C04.g1_A022 Loblolly pine ro... 71 1e-028
gb|CF388467.1|CF388467 RTDR2_3_A09.g1_A021 Loblolly pine ro... 69 3e-028
gb|DR078220.1|DR078220 RTFEPL1_2_E08.g1_A029 Roots plus add... 98 3e-028
gb|CX714453.1|CX714453 RTPQ1_22_A10.g1_A032 Roots treated w... 124 4e-028
gb|DR015314.1|DR015314 STRS1_2_F03.g1_A034 Shoot tip pitch ... 124 4e-028
gb|DR682151.1|DR682151 EST1072226 Normalized pine embryo li... 70 5e-028
gb|CV035101.1|CV035101 RTNACL1_13_D05.g1_A029 Roots plus ad... 107 1e-027
gb|CF393504.1|CF393504 RTDR3_13_D10.g1_A022 Loblolly pine r... 69 1e-027
gb|CO159310.1|CO159310 FLD1_12_G01.g1_A029 Root flooded Pin... 72 4e-027
gb|DR093195.1|DR093195 STRR1_6_E04.g1_A033 Stem Response Re... 120 6e-027
gb|DR025378.1|DR025378 STRS1_71_F10.b1_A034 Shoot tip pitch... 81 6e-027
gb|DR079369.1|DR079369 RTFEPL1_10_G08.g1_A029 Roots plus ad... 100 1e-025
gb|CO366148.1|CO366148 RTK1_26_D11.b1_A029 Roots minus pota... 88 2e-024
gb|CF401997.1|CF401997 RTWW1_16_C01.g1_A015 Well-watered lo... 96 2e-024
gb|DN459139.1|DN459139 EST954938 Sequencing ESTs from loblo... 73 3e-024
gb|BQ654464.1|BQ654464 NXRV080_F07_F NXRV (Nsf Xylem Root w... 70 5e-024
gb|DR090521.1|DR090521 RTAL1_15_D08.g1_A029 Roots plus adde... 69 5e-024
gb|CV034290.1|CV034290 RTNACL1_40_A03.b1_A029 Roots plus ad... 73 9e-024
gb|CO161137.1|CO161137 FLD1_26_H06.g1_A029 Root flooded Pin... 71 9e-024
gb|CO161057.1|CO161057 FLD1_26_H06.b1_A029 Root flooded Pin... 71 9e-024
gb|DR746134.1|DR746134 RTCU1_34_H11.g1_A029 Roots plus adde... 88 2e-023
gb|DR745539.1|DR745539 RTCU1_30_A01.g1_A029 Roots plus adde... 73 2e-023
gb|BX682475.1|BX682475 BX682475 Pinus pinaster differenciat... 109 2e-023
gb|BQ697177.1|BQ697177 NXPV_050_D10_F NXPV (Nsf Xylem Plani... 89 2e-023
gb|DR019031.1|DR019031 STRS1_27_H10.b1_A034 Shoot tip pitch... 107 5e-023
gb|DR016025.1|DR016025 STRS1_7_E06.b1_A034 Shoot tip pitch ... 84 1e-022
gb|BF610186.1|BF610186 NXSI_055_G03_F NXSI (Nsf Xylem Side ... 68 3e-022
gb|DR386753.1|DR386753 RTHG1_17_F04.b1_A029 Roots plus adde... 71 5e-022
gb|CF668278.1|CF668278 RTCNT1_35_B08.g1_A029 Root control P... 65 5e-022
gb|CF396077.1|CF396077 RTDS2_13_A10.g1_A021 Drought-stresse... 65 5e-022
gb|DR101409.1|DR101409 STRR1_72_H08.g1_A033 Stem Response R... 68 5e-022
gb|CF668395.1|CF668395 RTCNT1_36_F01.b1_A029 Root control P... 104 7e-022
gb|CO160937.1|CO160937 FLD1_25_C07.g1_A029 Root flooded Pin... 70 7e-022
gb|CV146601.1|CV146601 EST857810 Sequencing ESTs from loblo... 103 1e-021
gb|CO159649.1|CO159649 FLD1_14_H09.g1_A029 Root flooded Pin... 62 2e-021
gb|BF516945.1|BF516945 NXSI_007_B12_F NXSI (Nsf Xylem Side ... 82 2e-021
gb|CO163867.1|CO163867 FLD1_44_F11.b1_A029 Root flooded Pin... 63 3e-021
gb|BM133831.1|BM133831 NXLV_012_H04_F NXLV (Nsf Xylem Late ... 100 6e-021
gb|BF010640.1|BF010640 NXCI_087_D06_F NXCI (Nsf Xylem Compr... 100 6e-021
>gb|BX249681.1|BX249681 BX249681 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP027A11, mRNA sequence
Length = 678
Score = 246 bits (535), Expect(2) = 2e-078
Identities = 102/137 (74%), Positives = 118/137 (86%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN A +ILKPDV+APGVNILAAWTGAA+P++L D RRV+FNIISGTS
Sbjct: 143 SPVVAAFSSRGPNPMAQQILKPDVVAPGVNILAAWTGAAAPSELKSDKRRVKFNIISGTS 322
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAALL+ AHP+WSPAAI+SALMTTAY +DNSG+ ++D+ATG ST F GAG
Sbjct: 323 MSCPHVSGLAALLKGAHPDWSPAAIRSALMTTAYTVDNSGKPLRDVATGAPSTAFDHGAG 502
Query: 487 HVDPNAALDPRLVYDAG 537
HVDP AL+P LVYD G
Sbjct: 503 HVDPEKALNPGLVYDMG 553
Score = 175 bits (379), Expect(2) = 8e-053
Identities = 87/136 (63%), Positives = 95/136 (69%)
Frame = -1 / -1
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S TS G A GST PAP +N VD PVA S PELS +YAVVMSAD IAAGL SG
Sbjct: 552 PMS*TSPGLSAFSGSTWPAPWSNAVDGAPVATSRRGFPELSTVYAVVMSADRIAAGLQSG 373
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRIS 177
CA S+AARPLTCG D++VPE++LN TR S+ S G AAPV AA M TPGA TSG RI
Sbjct: 372 CAPFSNAARPLTCGHDIEVPEIILNFTRRLSLFSSDGAAAPVQAARMFTPGATTSGFRIC 193
Query: 176 GAR*LGPRLENAATRG 129
A LGPR ENAAT G
Sbjct: 192 CAMGLGPREENAATTG 145
Score = 66.2 bits (139), Expect(2) = 2e-078
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD IR YV T+P+PTATI F+GTV+G PS
Sbjct: 20 HLLPASAVGKKNGDLIRNYVLTNPNPTATIQFKGTVLGIKPS 145
Score = 50.3 bits (104), Expect(2) = 8e-053
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = -1 / -1
Query: 149 ENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
E A +G +P TVP N +VAVG G V T*+LI SP F PT AG+R
Sbjct: 168 EENAATTGEGLMPKTVPLN*IVAVGLGFVST*FLIKSPFFFPTAEAGSR 22
>gb|DN455969.1|DN455969 EST951768 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGJ95 5' end, mRNA sequence
Length = 886
Score = 246 bits (535), Expect(2) = 5e-078
Identities = 102/137 (74%), Positives = 118/137 (86%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN A +ILKPDV+APGVNILAAWTGAA+P++L D RRV+FNIISGTS
Sbjct: 232 SPVVAAFSSRGPNPMAQQILKPDVVAPGVNILAAWTGAAAPSELKSDKRRVKFNIISGTS 411
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAALL+ AHP+WSPAAI+SALMTTAY +DNSG+ ++D+ATG ST F GAG
Sbjct: 412 MSCPHVSGLAALLKGAHPDWSPAAIRSALMTTAYTVDNSGKPLRDVATGAPSTAFDHGAG 591
Query: 487 HVDPNAALDPRLVYDAG 537
HVDP AL+P LVYD G
Sbjct: 592 HVDPEKALNPGLVYDMG 642
Score = 174 bits (376), Expect(2) = 1e-051
Identities = 86/136 (63%), Positives = 95/136 (69%)
Frame = -1 / -3
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S TS G A GST PAP +N VD PVA S PELS +YAVVMSAD +AAGL SG
Sbjct: 641 PMS*TSPGLSAFSGSTWPAPWSNAVDGAPVATSRRGFPELSTVYAVVMSADRMAAGLQSG 462
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRIS 177
CA S+AARPLTCG D++VPE++LN TR S+ S G AAPV AA M TPGA TSG RI
Sbjct: 461 CAPFSNAARPLTCGHDIEVPEIILNFTRRLSLFSSDGAAAPVQAARMFTPGATTSGFRIC 282
Query: 176 GAR*LGPRLENAATRG 129
A LGPR ENAAT G
Sbjct: 281 CAMGLGPREENAATTG 234
Score = 64.9 bits (136), Expect(2) = 5e-078
Identities = 26/42 (61%), Positives = 34/42 (80%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD IR Y+ T+P+PTATI F+GTV+G PS
Sbjct: 109 HLLPASAVGKKNGDLIRNYLLTNPNPTATIQFKGTVLGIKPS 234
Score = 47.6 bits (98), Expect(2) = 1e-051
Identities = 25/49 (51%), Positives = 30/49 (61%)
Frame = -1 / -3
Query: 149 ENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
E A +G +P TVP N +VAVG G V *+LI SP F PT AG+R
Sbjct: 257 EENAATTGEGLMPKTVPLN*IVAVGLGFVSK*FLIKSPFFFPTAEAGSR 111
>gb|CF386604.1|CF386604 RTDR1_15_E07.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_15_E07_A015 5', mRNA
sequence
Length = 738
Score = 246 bits (535), Expect(2) = 6e-078
Identities = 102/137 (74%), Positives = 118/137 (86%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN A +ILKPDV+APGVNILAAWTGAA+P++L D RRV+FNIISGTS
Sbjct: 176 SPVVAAFSSRGPNPMAQQILKPDVVAPGVNILAAWTGAAAPSELKSDKRRVKFNIISGTS 355
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAALL+ AHP+WSPAAI+SALMTTAY +DNSG+ ++D+ATG ST F GAG
Sbjct: 356 MSCPHVSGLAALLKGAHPDWSPAAIRSALMTTAYTVDNSGKPLRDVATGAPSTAFDHGAG 535
Query: 487 HVDPNAALDPRLVYDAG 537
HVDP AL+P LVYD G
Sbjct: 536 HVDPEKALNPGLVYDMG 586
Score = 174 bits (376), Expect(2) = 3e-051
Identities = 86/136 (63%), Positives = 95/136 (69%)
Frame = -1 / -1
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S TS G A GST PAP +N VD PVA S PELS +YAVVMSAD +AAGL SG
Sbjct: 585 PMS*TSPGLSAFSGSTWPAPWSNAVDGAPVATSRRGFPELSTVYAVVMSADRMAAGLQSG 406
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRIS 177
CA S+AARPLTCG D++VPE++LN TR S+ S G AAPV AA M TPGA TSG RI
Sbjct: 405 CAPFSNAARPLTCGHDIEVPEIILNFTRRLSLFSSDGAAAPVQAARMFTPGATTSGFRIC 226
Query: 176 GAR*LGPRLENAATRG 129
A LGPR ENAAT G
Sbjct: 225 CAMGLGPREENAATTG 178
Score = 64.4 bits (135), Expect(2) = 6e-078
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD IR Y+ T+P+PTAT+ F+GTV+G PS
Sbjct: 53 HLLPASAVGKKNGDLIRNYLLTNPNPTATVQFKGTVLGIKPS 178
Score = 46.7 bits (96), Expect(2) = 3e-051
Identities = 25/49 (51%), Positives = 29/49 (59%)
Frame = -1 / -1
Query: 149 ENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
E A +G +P TVP N VAVG G V *+LI SP F PT AG+R
Sbjct: 201 EENAATTGEGLMPKTVPLN*TVAVGLGFVSK*FLIKSPFFFPTAEAGSR 55
>gb|DN458466.1|DN458466 EST954265 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIHC25 5' end, mRNA sequence
Length = 810
Score = 246 bits (535), Expect(2) = 2e-076
Identities = 102/137 (74%), Positives = 118/137 (86%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN A +ILKPDV+APGVNILAAWTGAA+P++L D RRV+FNIISGTS
Sbjct: 120 SPVVAAFSSRGPNPMAQQILKPDVVAPGVNILAAWTGAAAPSELKSDKRRVKFNIISGTS 299
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAALL+ AHP+WSPAAI+SALMTTAY +DNSG+ ++D+ATG ST F GAG
Sbjct: 300 MSCPHVSGLAALLKGAHPDWSPAAIRSALMTTAYTVDNSGKPLRDVATGAPSTAFDHGAG 479
Query: 487 HVDPNAALDPRLVYDAG 537
HVDP AL+P LVYD G
Sbjct: 480 HVDPEKALNPGLVYDMG 530
Score = 174 bits (376), Expect(2) = 7e-051
Identities = 86/136 (63%), Positives = 95/136 (69%)
Frame = -1 / -3
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S TS G A GST PAP +N VD PVA S PELS +YAVVMSAD +AAGL SG
Sbjct: 529 PMS*TSPGLSAFSGSTWPAPWSNAVDGAPVATSRRGFPELSTVYAVVMSADRMAAGLQSG 350
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRIS 177
CA S+AARPLTCG D++VPE++LN TR S+ S G AAPV AA M TPGA TSG RI
Sbjct: 349 CAPFSNAARPLTCGHDIEVPEIILNFTRRLSLFSSDGAAAPVQAARMFTPGATTSGFRIC 170
Query: 176 GAR*LGPRLENAATRG 129
A LGPR ENAAT G
Sbjct: 169 CAMGLGPREENAATTG 122
Score = 59.4 bits (124), Expect(2) = 2e-076
Identities = 24/40 (60%), Positives = 32/40 (80%)
Frame = +1 / +3
Query: 7 VPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
+PA+ VG+K GD IR Y+ T+P+PTATI F+GTV+G PS
Sbjct: 3 LPASAVGKKNGDLIRNYLLTNPNPTATIQFKGTVLGIKPS 122
Score = 45.3 bits (93), Expect(2) = 7e-051
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = -1 / -3
Query: 149 ENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGT 6
E A +G +P TVP N +VAVG G V *+LI SP F PT AG+
Sbjct: 145 EENAATTGEGLMPKTVPLN*IVAVGLGFVSK*FLIKSPFFFPTAEAGS 2
>gb|DR692783.1|DR692783 EST1082871 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADQ33 3' end, mRNA sequence
Length = 790
Score = 243 bits (529), Expect(2) = 5e-076
Identities = 101/137 (73%), Positives = 117/137 (85%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN A +ILKPDV+APGVNILAAWTG A+P++L D RRV+FNIISGTS
Sbjct: 256 SPVVAAFSSRGPNPMAQQILKPDVVAPGVNILAAWTGTAAPSELKGDKRRVKFNIISGTS 435
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAALL+ AHP+WSPAAI+SALMTTAY +DNSG+ ++D+ATG ST F GAG
Sbjct: 436 MSCPHVSGLAALLKGAHPDWSPAAIRSALMTTAYTVDNSGKPLRDVATGAPSTAFDHGAG 615
Query: 487 HVDPNAALDPRLVYDAG 537
HVDP AL+P LVYD G
Sbjct: 616 HVDPEKALNPGLVYDMG 666
Score = 170 bits (368), Expect(2) = 3e-050
Identities = 85/136 (62%), Positives = 93/136 (68%)
Frame = -1 / -3
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S TS G A GST PAP +N VD PVA S PELS +YAVVMSAD +AAGL SG
Sbjct: 665 PMS*TSPGLSAFSGSTWPAPWSNAVDGAPVATSRRGFPELSTVYAVVMSADRMAAGLQSG 486
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRIS 177
CA S+AARPLTCG D++VPE++LN TR S S G A PV AA M TPGA TSG RI
Sbjct: 485 CAPFSNAARPLTCGHDIEVPEIILNFTRRLSPFSSDGAAVPVQAARMFTPGATTSGFRIC 306
Query: 176 GAR*LGPRLENAATRG 129
A LGPR ENAAT G
Sbjct: 305 CAMGLGPREENAATTG 258
Score = 60.8 bits (127), Expect(2) = 5e-076
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = +1 / +1
Query: 4 LVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
L+PA+ VG+K GD IR Y+ T+P+PTAT+ F+GTV+G PS
Sbjct: 136 LLPASAVGKKNGDLIRNYLLTNPNPTATVQFKGTVLGIKPS 258
Score = 46.7 bits (96), Expect(2) = 3e-050
Identities = 25/49 (51%), Positives = 29/49 (59%)
Frame = -1 / -3
Query: 149 ENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
E A +G +P TVP N VAVG G V *+LI SP F PT AG+R
Sbjct: 281 EENAATTGEGLMPKTVPLN*TVAVGLGFVSK*FLIKSPFFFPTAEAGSR 135
>gb|BX677610.1|BX677610 BX677610 RN Pinus pinaster cDNA clone RN41H10, mRNA sequence
Length = 579
Score = 248 bits (538), Expect(2) = 2e-074
Identities = 103/137 (75%), Positives = 118/137 (86%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN A +ILKPDV+APGVNILAAWTGAA+P++L D RRV+FNIISGTS
Sbjct: 165 SPVVAAFSSRGPNPMAQQILKPDVVAPGVNILAAWTGAAAPSELKSDKRRVKFNIISGTS 344
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAALL+ AHPEWSPAAI+SALMTTAY +DNSG+ ++D+ATG ST F GAG
Sbjct: 345 MSCPHVSGLAALLKGAHPEWSPAAIRSALMTTAYTVDNSGKPLRDVATGAPSTAFDHGAG 524
Query: 487 HVDPNAALDPRLVYDAG 537
HVDP AL+P LVYD G
Sbjct: 525 HVDPEKALNPGLVYDMG 575
Score = 179 bits (387), Expect(2) = 3e-051
Identities = 88/136 (64%), Positives = 96/136 (70%)
Frame = -1 / -3
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S TS G A GST PAP +N VD PVA S PELS +YAVVMSAD IAAGLHSG
Sbjct: 574 PMS*TSPGLSAFSGSTWPAPWSNAVDGAPVATSRRGFPELSTVYAVVMSADRIAAGLHSG 395
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRIS 177
CA S+AARPLTCG D++VPE++LN TR S+ S G AAPV AA M TPGA TSG RI
Sbjct: 394 CAPFSNAARPLTCGHDIEVPEIILNFTRRLSLFSSDGAAAPVQAARMFTPGATTSGFRIC 215
Query: 176 GAR*LGPRLENAATRG 129
A LGPR ENAAT G
Sbjct: 214 CAMGLGPREENAATTG 167
Score = 51.2 bits (106), Expect(2) = 2e-074
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +1 / +3
Query: 28 QKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
+K GD IR YV T+P+PTATI F+GTV+G PS
Sbjct: 69 EKDGDLIRNYVLTNPNPTATIQFKGTVLGIKPS 167
Score = 41.6 bits (85), Expect(2) = 3e-051
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = -1 / -3
Query: 149 ENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNF 30
E A +G +P TVP N +VAVG G V T*+LI SP+F
Sbjct: 190 EENAATTGEGLMPKTVPLN*IVAVGLGFVST*FLIKSPSF 71
>gb|CV147000.1|CV147000 EST858209 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIE262 5' end, mRNA sequence
Length = 981
Score = 232 bits (503), Expect(2) = 9e-072
Identities = 97/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 274 SPVVAAFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTS 453
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S PF GAG
Sbjct: 454 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAG 633
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP AL+P L+YD D
Sbjct: 634 HVDPKKALNPGLIYDISPD 690
Score = 150 bits (324), Expect(2) = 1e-041
Identities = 79/139 (56%), Positives = 91/139 (65%)
Frame = -1 / -2
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S S G RA LGST PAP + G+++ PVA S + LS AVVMSAD +AAGL
Sbjct: 692 SSGLMS*MSPGLRAFLGSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGL 513
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A SAA PLTCG D++VPE MLN TRL S VG A P HAA +L+PGA+TSG
Sbjct: 512 QSGNAPFISAAMPLTCGHDIEVPERMLNLTRL*SSLSPVGPATPDHAARILSPGAITSGF 333
Query: 185 RISGAR*LGPRLENAATRG 129
+ISG GP ENAAT G
Sbjct: 332 KISGLTRFGPLDENAATTG 276
Score = 58.5 bits (122), Expect(2) = 9e-072
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD I+ Y+ + +PTATI F GTV+G PS
Sbjct: 151 HLLPASAVGEKHGDAIKRYIASTKNPTATINFGGTVLGVKPS 276
Score = 38.0 bits (77), Expect(2) = 1e-041
Identities = 23/50 (46%), Positives = 25/50 (50%)
Frame = -1 / -2
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
L+ A DG P TVP +VAVG * LI SP F PT AG R
Sbjct: 302 LDENAATTGDGLTPSTVPPKLIVAVGFFVEAM*RLIASPCFSPTADAGRR 153
>gb|DT625286.1|DT625286 EST1159561 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAN86 5' end, mRNA sequence
Length = 913
Score = 232 bits (503), Expect(2) = 9e-072
Identities = 97/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 274 SPVVAAFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTS 453
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S PF GAG
Sbjct: 454 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAG 633
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP AL+P L+YD D
Sbjct: 634 HVDPKKALNPGLIYDISPD 690
Score = 150 bits (324), Expect(2) = 1e-041
Identities = 79/139 (56%), Positives = 91/139 (65%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S S G RA LGST PAP + G+++ PVA S + LS AVVMSAD +AAGL
Sbjct: 692 SSGLMS*MSPGLRAFLGSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGL 513
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A SAA PLTCG D++VPE MLN TRL S VG A P HAA +L+PGA+TSG
Sbjct: 512 QSGNAPFISAAMPLTCGHDIEVPERMLNLTRL*SSLSPVGPATPDHAARILSPGAITSGF 333
Query: 185 RISGAR*LGPRLENAATRG 129
+ISG GP ENAAT G
Sbjct: 332 KISGLTRFGPLDENAATTG 276
Score = 58.5 bits (122), Expect(2) = 9e-072
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD I+ Y+ + +PTATI F GTV+G PS
Sbjct: 151 HLLPASAVGEKHGDAIKRYIASTKNPTATINFGGTVLGVKPS 276
Score = 38.0 bits (77), Expect(2) = 1e-041
Identities = 23/50 (46%), Positives = 25/50 (50%)
Frame = -1 / -3
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
L+ A DG P TVP +VAVG * LI SP F PT AG R
Sbjct: 302 LDENAATTGDGLTPSTVPPKLIVAVGFFVEAM*RLIASPCFSPTADAGRR 153
>gb|DN445702.1|DN445702 EST941501 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIA043 5' end, mRNA sequence
Length = 887
Score = 232 bits (503), Expect(2) = 9e-072
Identities = 97/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 239 SPVVAAFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTS 418
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S PF GAG
Sbjct: 419 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAG 598
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP AL+P L+YD D
Sbjct: 599 HVDPKKALNPGLIYDISPD 655
Score = 150 bits (324), Expect(2) = 1e-041
Identities = 79/139 (56%), Positives = 91/139 (65%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S S G RA LGST PAP + G+++ PVA S + LS AVVMSAD +AAGL
Sbjct: 657 SSGLMS*MSPGLRAFLGSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGL 478
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A SAA PLTCG D++VPE MLN TRL S VG A P HAA +L+PGA+TSG
Sbjct: 477 QSGNAPFISAAMPLTCGHDIEVPERMLNLTRL*SSLSPVGPATPDHAARILSPGAITSGF 298
Query: 185 RISGAR*LGPRLENAATRG 129
+ISG GP ENAAT G
Sbjct: 297 KISGLTRFGPLDENAATTG 241
Score = 58.5 bits (122), Expect(2) = 9e-072
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD I+ Y+ + +PTATI F GTV+G PS
Sbjct: 116 HLLPASAVGEKHGDAIKRYIASTKNPTATINFGGTVLGVKPS 241
Score = 38.0 bits (77), Expect(2) = 1e-041
Identities = 23/50 (46%), Positives = 25/50 (50%)
Frame = -1 / -3
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
L+ A DG P TVP +VAVG * LI SP F PT AG R
Sbjct: 267 LDENAATTGDGLTPSTVPPKLIVAVGFFVEAM*RLIASPCFSPTADAGRR 118
>gb|DN462084.1|DN462084 EST957883 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIII19 5' end, mRNA sequence
Length = 875
Score = 232 bits (503), Expect(2) = 9e-072
Identities = 97/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 298 SPVVAAFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTS 477
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S PF GAG
Sbjct: 478 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAG 657
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP AL+P L+YD D
Sbjct: 658 HVDPKKALNPGLIYDISPD 714
Score = 150 bits (324), Expect(2) = 1e-041
Identities = 79/139 (56%), Positives = 91/139 (65%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S S G RA LGST PAP + G+++ PVA S + LS AVVMSAD +AAGL
Sbjct: 716 SSGLMS*MSPGLRAFLGSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGL 537
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A SAA PLTCG D++VPE MLN TRL S VG A P HAA +L+PGA+TSG
Sbjct: 536 QSGNAPFISAAMPLTCGHDIEVPERMLNLTRL*SSLSPVGPATPDHAARILSPGAITSGF 357
Query: 185 RISGAR*LGPRLENAATRG 129
+ISG GP ENAAT G
Sbjct: 356 KISGLTRFGPLDENAATTG 300
Score = 58.5 bits (122), Expect(2) = 9e-072
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD I+ Y+ + +PTATI F GTV+G PS
Sbjct: 175 HLLPASAVGEKHGDAIKRYIASTKNPTATINFGGTVLGVKPS 300
Score = 38.0 bits (77), Expect(2) = 1e-041
Identities = 23/50 (46%), Positives = 25/50 (50%)
Frame = -1 / -1
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
L+ A DG P TVP +VAVG * LI SP F PT AG R
Sbjct: 326 LDENAATTGDGLTPSTVPPKLIVAVGFFVEAM*RLIASPCFSPTADAGRR 177
>gb|DN452691.1|DN452691 EST948490 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIFK80 5' end, mRNA sequence
Length = 800
Score = 232 bits (503), Expect(2) = 9e-072
Identities = 97/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 377 SPVVAAFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTS 556
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S PF GAG
Sbjct: 557 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAG 736
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP AL+P L+YD D
Sbjct: 737 HVDPKKALNPGLIYDISPD 793
Score = 150 bits (324), Expect(2) = 1e-041
Identities = 79/139 (56%), Positives = 91/139 (65%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S S G RA LGST PAP + G+++ PVA S + LS AVVMSAD +AAGL
Sbjct: 795 SSGLMS*MSPGLRAFLGSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGL 616
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A SAA PLTCG D++VPE MLN TRL S VG A P HAA +L+PGA+TSG
Sbjct: 615 QSGNAPFISAAMPLTCGHDIEVPERMLNLTRL*SSLSPVGPATPDHAARILSPGAITSGF 436
Query: 185 RISGAR*LGPRLENAATRG 129
+ISG GP ENAAT G
Sbjct: 435 KISGLTRFGPLDENAATTG 379
Score = 58.5 bits (122), Expect(2) = 9e-072
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD I+ Y+ + +PTATI F GTV+G PS
Sbjct: 254 HLLPASAVGEKHGDAIKRYIASTKNPTATINFGGTVLGVKPS 379
Score = 38.0 bits (77), Expect(2) = 1e-041
Identities = 23/50 (46%), Positives = 25/50 (50%)
Frame = -1 / -3
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
L+ A DG P TVP +VAVG * LI SP F PT AG R
Sbjct: 405 LDENAATTGDGLTPSTVPPKLIVAVGFFVEAM*RLIASPCFSPTADAGRR 256
>gb|DN449602.1|DN449602 EST945401 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPICJ66 5' end, mRNA sequence
Length = 871
Score = 245 bits (533), Expect(2) = 3e-071
Identities = 102/137 (74%), Positives = 118/137 (86%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN A +ILKPDV+APGVNILAAWTGAA+P++L D RRV+FNIISGTS
Sbjct: 81 SPVVAAFSSRGPNPMAQQILKPDVVAPGVNILAAWTGAAAPSELKGDKRRVKFNIISGTS 260
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAALL+ AHP+WSPAAI+SALMTTAY +DNSG+ ++D+ATG ST F GAG
Sbjct: 261 MSCPHVSGLAALLKGAHPDWSPAAIRSALMTTAYTVDNSGKPLRDVATGAPSTAFDHGAG 440
Query: 487 HVDPNAALDPRLVYDAG 537
HVDP AL+P LVYD G
Sbjct: 441 HVDPEKALNPGLVYDMG 491
Score = 172 bits (372), Expect(2) = 6e-046
Identities = 86/136 (63%), Positives = 94/136 (69%)
Frame = -1 / -1
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S TS G A GST PAP +N VD PVA S PELS +YAVVMSAD +AAGL SG
Sbjct: 490 PMS*TSPGLSAFSGSTWPAPWSNAVDGAPVATSRRGFPELSTVYAVVMSADRMAAGLQSG 311
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRIS 177
CA S+AARPLTCG D++VPE++LN TR S S G AAPV AA M TPGA TSG RI
Sbjct: 310 CAPFSNAARPLTCGHDIEVPEIILNFTRRLSPFSSDGAAAPVQAARMFTPGATTSGFRIC 131
Query: 176 GAR*LGPRLENAATRG 129
A LGPR ENAAT G
Sbjct: 130 CAMGLGPREENAATTG 83
Score = 43.0 bits (88), Expect(2) = 3e-071
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1 / +3
Query: 46 IRYYVQTDPSPTATIVFRGTVIGKSPS 126
IR Y+ T+P+PTAT+ F+GTV+G PS
Sbjct: 3 IRNYLLTNPNPTATVQFKGTVLGIKPS 83
Score = 30.7 bits (61), Expect(2) = 6e-046
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -1 / -1
Query: 149 ENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLI 45
E A +G +P TVP N VAVG G V *+LI
Sbjct: 106 EENAATTGEGLMPKTVPLN*TVAVGLGFVSK*FLI 2
>gb|DR059573.1|DR059573 RTNIT1_18_B04.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_18_B04_A029 5', mRNA sequence
Length = 858
Score = 233 bits (507), Expect(2) = 9e-069
Identities = 96/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FSSRGPN PEILKPDVIAPGVNILA WTGA P+ L D RR +FNI+SGTS
Sbjct: 276 APVVASFSSRGPNPETPEILKPDVIAPGVNILAGWTGAVGPSSLPTDKRRTQFNILSGTS 455
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG+AALLR AHP+WSPAA++SALMTTAY DN G + D A+G STPF GAG
Sbjct: 456 MACPHVSGVAALLRGAHPQWSPAAVRSALMTTAYTQDNRGHRMIDEASGNASTPFDFGAG 635
Query: 487 HVDPNAALDPRLVYDAGSD 543
HV P A+DP L+YDAG++
Sbjct: 636 HVHPERAMDPGLIYDAGTE 692
Score = 147 bits (318), Expect = 3e-035
Identities = 76/140 (54%), Positives = 91/140 (65%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS PAS GS A G T PAP++ GVD+ P A S+++ P LS + AVV+ ADL AAGL
Sbjct: 694 SSVPAS*IRPGSIALSGCTCPAPKSKGVDALPEASSIIL*PLLS*V*AVVIRADLTAAGL 515
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
H GCA AA PLT GQ ++VP+ +LN L S+ R G APVH A + TPGA+TSGL
Sbjct: 514 HCGCAPLRRAATPLT*GQAIEVPDKILNCVLLLSVGRLDGPTAPVHPARIFTPGAITSGL 335
Query: 185 RISGAR*LGPRLENAATRGA 126
RISG LGP E AT GA
Sbjct: 334 RISGVSGLGPLEEKDATTGA 275
Score = 46.7 bits (96), Expect(2) = 9e-069
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1 / +3
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
H++P + VG K G+ IR Y+ T P ATI GTV+G P+
Sbjct: 153 HMLPTSAVGAKEGELIRQYIATTKGPAATISGLGTVLGIKPA 278
>gb|CF671984.1|CF671984 RTCNT1_60_C05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_60_C05_A029 5', mRNA sequence
Length = 786
Score = 233 bits (507), Expect(2) = 9e-069
Identities = 96/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FSSRGPN PEILKPDVIAPGVNILA WTGA P+ L D RR +FNI+SGTS
Sbjct: 157 APVVASFSSRGPNPETPEILKPDVIAPGVNILAGWTGAVGPSSLPTDKRRTQFNILSGTS 336
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG+AALLR AHP+WSPAA++SALMTTAY DN G + D A+G STPF GAG
Sbjct: 337 MACPHVSGVAALLRGAHPQWSPAAVRSALMTTAYTQDNRGHRMIDEASGNASTPFDFGAG 516
Query: 487 HVDPNAALDPRLVYDAGSD 543
HV P A+DP L+YDAG++
Sbjct: 517 HVHPERAMDPGLIYDAGTE 573
Score = 147 bits (318), Expect = 3e-035
Identities = 76/140 (54%), Positives = 91/140 (65%)
Frame = -1 / -2
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS PAS GS A G T PAP++ GVD+ P A S+++ P LS + AVV+ ADL AAGL
Sbjct: 575 SSVPAS*IRPGSIALSGCTCPAPKSKGVDALPEASSIIL*PLLS*V*AVVIRADLTAAGL 396
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
H GCA AA PLT GQ ++VP+ +LN L S+ R G APVH A + TPGA+TSGL
Sbjct: 395 HCGCAPLRRAATPLT*GQAIEVPDKILNCVLLLSVGRLDGPTAPVHPARIFTPGAITSGL 216
Query: 185 RISGAR*LGPRLENAATRGA 126
RISG LGP E AT GA
Sbjct: 215 RISGVSGLGPLEEKDATTGA 156
Score = 46.7 bits (96), Expect(2) = 9e-069
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
H++P + VG K G+ IR Y+ T P ATI GTV+G P+
Sbjct: 34 HMLPTSAVGAKEGELIRQYIATTKGPAATISGLGTVLGIKPA 159
>gb|CF671976.1|CF671976 RTCNT1_60_B05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_60_B05_A029 5', mRNA sequence
Length = 763
Score = 233 bits (507), Expect(2) = 9e-069
Identities = 96/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FSSRGPN PEILKPDVIAPGVNILA WTGA P+ L D RR +FNI+SGTS
Sbjct: 139 APVVASFSSRGPNPETPEILKPDVIAPGVNILAGWTGAVGPSSLPTDKRRTQFNILSGTS 318
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG+AALLR AHP+WSPAA++SALMTTAY DN G + D A+G STPF GAG
Sbjct: 319 MACPHVSGVAALLRGAHPQWSPAAVRSALMTTAYTQDNRGHRMIDEASGNASTPFDFGAG 498
Query: 487 HVDPNAALDPRLVYDAGSD 543
HV P A+DP L+YDAG++
Sbjct: 499 HVHPERAMDPGLIYDAGTE 555
Score = 147 bits (318), Expect = 3e-035
Identities = 76/140 (54%), Positives = 91/140 (65%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS PAS GS A G T PAP++ GVD+ P A S+++ P LS + AVV+ ADL AAGL
Sbjct: 557 SSVPAS*IRPGSIALSGCTCPAPKSKGVDALPEASSIIL*PLLS*V*AVVIRADLTAAGL 378
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
H GCA AA PLT GQ ++VP+ +LN L S+ R G APVH A + TPGA+TSGL
Sbjct: 377 HCGCAPLRRAATPLT*GQAIEVPDKILNCVLLLSVGRLDGPTAPVHPARIFTPGAITSGL 198
Query: 185 RISGAR*LGPRLENAATRGA 126
RISG LGP E AT GA
Sbjct: 197 RISGVSGLGPLEEKDATTGA 138
Score = 46.7 bits (96), Expect(2) = 9e-069
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
H++P + VG K G+ IR Y+ T P ATI GTV+G P+
Sbjct: 16 HMLPTSAVGAKEGELIRQYIATTKGPAATISGLGTVLGIKPA 141
>gb|CO362216.1|CO362216 RTK1_2_D03.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_2_D03_A029 3', mRNA sequence
Length = 763
Score = 233 bits (507), Expect(2) = 9e-069
Identities = 96/139 (69%), Positives = 111/139 (79%)
Frame = +1 / -1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FSSRGPN PEILKPDVIAPGVNILA WTGA P+ L D RR +FNI+SGTS
Sbjct: 565 APVVASFSSRGPNPETPEILKPDVIAPGVNILAGWTGAVGPSSLPTDKRRTQFNILSGTS 386
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG+AALLR AHP+WSPAA++SALMTTAY DN G + D A+G STPF GAG
Sbjct: 385 MACPHVSGVAALLRGAHPQWSPAAVRSALMTTAYTQDNRGHRMIDEASGNASTPFDFGAG 206
Query: 487 HVDPNAALDPRLVYDAGSD 543
HV P A+DP L+YDAG++
Sbjct: 205 HVHPERAMDPGLIYDAGTE 149
Score = 147 bits (318), Expect = 3e-035
Identities = 76/140 (54%), Positives = 91/140 (65%)
Frame = -1 / +3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS PAS GS A G T PAP++ GVD+ P A S+++ P LS + AVV+ ADL AAGL
Sbjct: 147 SSVPAS*IRPGSIALSGCTCPAPKSKGVDALPEASSIIL*PLLS*V*AVVIRADLTAAGL 326
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
H GCA AA PLT GQ ++VP+ +LN L S+ R G APVH A + TPGA+TSGL
Sbjct: 327 HCGCAPLRRAATPLT*GQAIEVPDKILNCVLLLSVGRLDGPTAPVHPARIFTPGAITSGL 506
Query: 185 RISGAR*LGPRLENAATRGA 126
RISG LGP E AT GA
Sbjct: 507 RISGVSGLGPLEEKDATTGA 566
Score = 46.7 bits (96), Expect(2) = 9e-069
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1 / -1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
H++P + VG K G+ IR Y+ T P ATI GTV+G P+
Sbjct: 688 HMLPTSAVGAKEGELIRQYIATTKGPAATISGLGTVLGIKPA 563
>gb|CV031466.1|CV031466 RTNACL1_1_F03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_1_F03_A029 5', mRNA sequence
Length = 751
Score = 233 bits (507), Expect(2) = 9e-069
Identities = 96/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FSSRGPN PEILKPDVIAPGVNILA WTGA P+ L D RR +FNI+SGTS
Sbjct: 264 APVVASFSSRGPNPETPEILKPDVIAPGVNILAGWTGAVGPSSLPTDKRRTQFNILSGTS 443
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG+AALLR AHP+WSPAA++SALMTTAY DN G + D A+G STPF GAG
Sbjct: 444 MACPHVSGVAALLRGAHPQWSPAAVRSALMTTAYTQDNRGHRMIDEASGNASTPFDFGAG 623
Query: 487 HVDPNAALDPRLVYDAGSD 543
HV P A+DP L+YDAG++
Sbjct: 624 HVHPERAMDPGLIYDAGTE 680
Score = 147 bits (318), Expect = 3e-035
Identities = 76/140 (54%), Positives = 91/140 (65%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS PAS GS A G T PAP++ GVD+ P A S+++ P LS + AVV+ ADL AAGL
Sbjct: 682 SSVPAS*IRPGSIALSGCTCPAPKSKGVDALPEASSIIL*PLLS*V*AVVIRADLTAAGL 503
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
H GCA AA PLT GQ ++VP+ +LN L S+ R G APVH A + TPGA+TSGL
Sbjct: 502 HCGCAPLRRAATPLT*GQAIEVPDKILNCVLLLSVGRLDGPTAPVHPARIFTPGAITSGL 323
Query: 185 RISGAR*LGPRLENAATRGA 126
RISG LGP E AT GA
Sbjct: 322 RISGVSGLGPLEEKDATTGA 263
Score = 46.7 bits (96), Expect(2) = 9e-069
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1 / +3
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
H++P + VG K G+ IR Y+ T P ATI GTV+G P+
Sbjct: 141 HMLPTSAVGAKEGELIRQYIATTKGPAATISGLGTVLGIKPA 266
>gb|DN453469.1|DN453469 EST949268 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIFT16 5' end, mRNA sequence
Length = 861
Score = 245 bits (533), Expect(2) = 8e-068
Identities = 102/137 (74%), Positives = 118/137 (86%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN A +ILKPDV+APGVNILAAWTGAA+P++L D RRV+FNIISGTS
Sbjct: 55 SPVVAAFSSRGPNPMAQQILKPDVVAPGVNILAAWTGAAAPSELKGDKRRVKFNIISGTS 234
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAALL+ AHP+WSPAAI+SALMTTAY +DNSG+ ++D+ATG ST F GAG
Sbjct: 235 MSCPHVSGLAALLKGAHPDWSPAAIRSALMTTAYTVDNSGKPLRDVATGAPSTAFDHGAG 414
Query: 487 HVDPNAALDPRLVYDAG 537
HVDP AL+P LVYD G
Sbjct: 415 HVDPEKALNPGLVYDMG 465
Score = 172 bits (372), Expect(2) = 3e-044
Identities = 86/136 (63%), Positives = 94/136 (69%)
Frame = -1 / -2
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S TS G A GST PAP +N VD PVA S PELS +YAVVMSAD +AAGL SG
Sbjct: 464 PMS*TSPGLSAFSGSTWPAPWSNAVDGAPVATSRRGFPELSTVYAVVMSADRMAAGLQSG 285
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRIS 177
CA S+AARPLTCG D++VPE++LN TR S S G AAPV AA M TPGA TSG RI
Sbjct: 284 CAPFSNAARPLTCGHDIEVPEIILNFTRRLSPFSSDGAAAPVQAARMFTPGATTSGFRIC 105
Query: 176 GAR*LGPRLENAATRG 129
A LGPR ENAAT G
Sbjct: 104 CAMGLGPREENAATTG 57
Score = 31.6 bits (63), Expect(2) = 8e-068
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 70 PSPTATIVFRGTVIGKSPS 126
P+P AT+ F+GTV+G PS
Sbjct: 1 PNPMATVQFKGTVLGIKPS 57
Score = 24.8 bits (48), Expect(2) = 3e-044
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1 / -2
Query: 149 ENAATRGADGDLPMTVPRNTMVAVG 75
E A +G +P TVP N VA+G
Sbjct: 80 EENAATTGEGLMPKTVPLN*TVAIG 6
>gb|CV146360.1|CV146360 EST857569 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDV51 5' end, mRNA sequence
Length = 813
Score = 213 bits (463), Expect(2) = 3e-067
Identities = 89/119 (74%), Positives = 104/119 (87%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN A +ILKPDV+APGVNILAAWTGAA+P++L D RRV+FNIISGTS
Sbjct: 443 SPVVAAFSSRGPNPMAQQILKPDVVAPGVNILAAWTGAAAPSELKGDKRRVKFNIISGTS 622
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGA 483
MSCPHVSGLAALL+ AHP+WSPAAI+SALMTTAY +DNSG+ ++D+ATG ST F GA
Sbjct: 623 MSCPHVSGLAALLKGAHPDWSPAAIRSALMTTAYTVDNSGKPLRDVATGAPSTAFDHGA 799
Score = 157 bits (339), Expect(2) = 4e-046
Identities = 76/118 (64%), Positives = 84/118 (71%)
Frame = -1 / -1
Query: 482 APRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMD 303
AP +N VD PVA S PELS +YAVVMSAD +AAGL SGCA S+AARPLTCG D++
Sbjct: 798 APWSNAVDGAPVATSRRGFPELSTVYAVVMSADRMAAGLQSGCAPFSNAARPLTCGHDIE 619
Query: 302 VPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRG 129
VPE++LN TR S S G AAPV AA M TPGA TSG RI A LGPR ENAAT G
Sbjct: 618 VPEIILNFTRRLSPFSSDGAAAPVQAARMFTPGATTSGFRICCAMGLGPREENAATTG 445
Score = 61.7 bits (129), Expect(2) = 3e-067
Identities = 24/42 (57%), Positives = 33/42 (78%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD IR Y+ T+P+P AT+ F+GTV+G PS
Sbjct: 320 HLLPASAVGKKNGDLIRNYLLTNPNPMATVQFKGTVLGIKPS 445
Score = 46.2 bits (95), Expect(2) = 4e-046
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = -1 / -1
Query: 149 ENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
E A +G +P TVP N VA+G G V *+LI SP F PT AG+R
Sbjct: 468 EENAATTGEGLMPKTVPLN*TVAIGLGFVSK*FLIKSPFFFPTAEAGSR 322
>gb|DN456576.1|DN456576 EST952375 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGQ50 5' end, mRNA sequence
Length = 764
Score = 215 bits (466), Expect(2) = 1e-066
Identities = 90/124 (72%), Positives = 102/124 (82%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 393 SPVVAAFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTS 572
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S PF GAG
Sbjct: 573 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAG 752
Query: 487 HVDP 498
HVDP
Sbjct: 753 HVDP 764
Score = 142 bits (307), Expect(2) = 3e-039
Identities = 71/123 (57%), Positives = 83/123 (67%)
Frame = -1 / -2
Query: 497 GST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTC 318
GST PAP + G+++ PVA S + LS AVVMSAD +AAGL SG A SAA PLTC
Sbjct: 763 GSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGLQSGNAPFISAAMPLTC 584
Query: 317 GQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAA 138
G D++VPE MLN TRL S VG A P HAA +L+PGA+TSG +ISG GP ENAA
Sbjct: 583 GHDIEVPERMLNLTRL*SSLSPVGPATPDHAARILSPGAITSGFKISGLTRFGPLDENAA 404
Query: 137 TRG 129
T G
Sbjct: 403 TTG 395
Score = 58.5 bits (122), Expect(2) = 1e-066
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1 / +3
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD I+ Y+ + +PTATI F GTV+G PS
Sbjct: 270 HLLPASAVGEKHGDAIKRYIASTKNPTATINFGGTVLGVKPS 395
Score = 38.0 bits (77), Expect(2) = 3e-039
Identities = 23/50 (46%), Positives = 25/50 (50%)
Frame = -1 / -2
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
L+ A DG P TVP +VAVG * LI SP F PT AG R
Sbjct: 421 LDENAATTGDGLTPSTVPPKLIVAVGFFVEAM*RLIASPCFSPTADAGRR 272
>gb|CF396374.1|CF396374 RTDS2_21_H10.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_21_H10_A021 5', mRNA sequence
Length = 743
Score = 232 bits (503), Expect(2) = 2e-066
Identities = 97/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 88 SPVVAAFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTS 267
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S PF GAG
Sbjct: 268 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAG 447
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP AL+P L+YD D
Sbjct: 448 HVDPKKALNPGLIYDISPD 504
Score = 150 bits (324), Expect(2) = 7e-038
Identities = 79/139 (56%), Positives = 91/139 (65%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S S G RA LGST PAP + G+++ PVA S + LS AVVMSAD +AAGL
Sbjct: 506 SSGLMS*MSPGLRAFLGSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGL 327
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A SAA PLTCG D++VPE MLN TRL S VG A P HAA +L+PGA+TSG
Sbjct: 326 QSGNAPFISAAMPLTCGHDIEVPERMLNLTRL*SSLSPVGPATPDHAARILSPGAITSGF 147
Query: 185 RISGAR*LGPRLENAATRG 129
+ISG GP ENAAT G
Sbjct: 146 KISGLTRFGPLDENAATTG 90
Score = 40.3 bits (82), Expect(2) = 2e-066
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1 / +1
Query: 37 GDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
GD I+ Y+ + +PTATI F GTV+G PS
Sbjct: 1 GDAIKRYIASTKNPTATINFGGTVLGVKPS 90
Score = 25.7 bits (50), Expect(2) = 7e-038
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1 / -1
Query: 152 LENAATRGADGDLPMTVPRNTMVAVG 75
L+ A DG P TVP +VAVG
Sbjct: 116 LDENAATTGDGLTPSTVPPKLIVAVG 39
>gb|DR689559.1|DR689559 EST1079645 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACK25 3' end, mRNA sequence
Length = 681
Score = 213 bits (463), Expect(2) = 2e-066
Identities = 90/124 (72%), Positives = 101/124 (81%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPD IAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 310 SPVVAAFSSRGPNLVNPEILKPDFIAPGLNILAAWSGVAGPTGLSDDRRRVKFNILSGTS 489
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSG+AAL++ A PEWSPAAIKSALMTTAY LDN+ ++D ATG S PF GAG
Sbjct: 490 MSCPHVSGIAALMKGAFPEWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAG 669
Query: 487 HVDP 498
HVDP
Sbjct: 670 HVDP 681
Score = 145 bits (313), Expect(2) = 2e-036
Identities = 71/123 (57%), Positives = 83/123 (67%)
Frame = -1 / -2
Query: 497 GST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTC 318
GST PAP + G+++ PVA S + LS AVVMSAD +AAGLHSG A SAA PLTC
Sbjct: 680 GSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGLHSGNAPFISAAMPLTC 501
Query: 317 GQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAA 138
G D++VPE MLN TRL S VG A P HAA +L+PGA+ SG +ISG GP ENAA
Sbjct: 500 GHDIEVPERMLNLTRLRSSLSPVGPATPDHAARILSPGAIKSGFKISGLTRFGPLDENAA 321
Query: 137 TRG 129
T G
Sbjct: 320 TTG 312
Score = 58.5 bits (122), Expect(2) = 2e-066
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD I+ Y+ + +PTATI F GTV+G PS
Sbjct: 187 HLLPASAVGEKHGDAIKRYIASTKNPTATINFGGTVLGVKPS 312
Score = 25.7 bits (50), Expect(2) = 2e-036
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1 / -2
Query: 152 LENAATRGADGDLPMTVPRNTMVAVG 75
L+ A DG P TVP +VAVG
Sbjct: 338 LDENAATTGDGLTPSTVPPKLIVAVG 261
>gb|CF390508.1|CF390508 RTDR2_19_F07.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_19_F07_A021 5', mRNA
sequence
Length = 553
Score = 225 bits (488), Expect(2) = 9e-066
Identities = 93/134 (69%), Positives = 106/134 (79%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FSSRGPN PEILKPDVIAPGVNILA WTGA P+ L D RR +FNI+SGTS
Sbjct: 151 APVVASFSSRGPNPETPEILKPDVIAPGVNILAGWTGAVGPSSLPTDKRRTQFNILSGTS 330
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG+AALLR AHP+WSPAA++SALMTTAY DN G + D A+G STPF GAG
Sbjct: 331 MACPHVSGVAALLRGAHPQWSPAAVRSALMTTAYTQDNRGHRMIDEASGNASTPFDFGAG 510
Query: 487 HVDPNAALDPRLVY 528
HV P A+DP L+Y
Sbjct: 511 HVHPERAMDPGLIY 552
Score = 142 bits (307), Expect = 8e-034
Identities = 72/132 (54%), Positives = 87/132 (65%)
Frame = -1 / -3
Query: 521 SLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRS 342
S GS A G T PAP++ GVD+ P A S+++ P LS + AVV+ ADL AAGLH GCA
Sbjct: 545 SPGSIALSGCTCPAPKSKGVDALPEASSIIL*PLLS*V*AVVIRADLTAAGLHCGCAPLR 366
Query: 341 SAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*L 162
AA PLT GQ ++VP+ +LN L S+ R G APVH A + TPGA+TSGLRISG L
Sbjct: 365 RAATPLT*GQAIEVPDKILNCVLLLSVGRLDGPTAPVHPARIFTPGAITSGLRISGVSGL 186
Query: 161 GPRLENAATRGA 126
GP E AT GA
Sbjct: 185 GPLEEKDATTGA 150
Score = 45.3 bits (93), Expect(2) = 9e-066
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
H++P + VG K G+ I+ Y+ T P ATI GTV+G P+
Sbjct: 28 HMLPTSAVGAKEGELIKQYIATTKGPAATISGLGTVLGIKPA 153
>gb|DR099303.1|DR099303 STRR1_54_C10.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_54_C10_A033 5', mRNA sequence
Length = 699
Score = 144 bits (311), Expect(3) = 1e-065
Identities = 59/81 (72%), Positives = 68/81 (83%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPD IAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 229 SPVVAAFSSRGPNLVNPEILKPDFIAPGLNILAAWSGVAGPTGLSDDRRRVKFNILSGTS 408
Query: 307 MSCPHVSGLAALLRQAHPEWS 369
MSCPHVSG+AAL++ A P+WS
Sbjct: 409 MSCPHVSGIAALMKGAFPDWS 471
Score = 98.6 bits (210), Expect(3) = 2e-032
Identities = 48/87 (55%), Positives = 56/87 (64%)
Frame = -1 / -2
Query: 389 ADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLT 210
A ++ L SG A SAA PLTCG D++VPE MLN TRL S VG A P HAA +L+
Sbjct: 491 APILWRRLQSGNAPFISAAMPLTCGHDIEVPERMLNLTRLRSSLSPVGPATPDHAARILS 312
Query: 209 PGAMTSGLRISGAR*LGPRLENAATRG 129
PGA+ SG +ISG GP ENAAT G
Sbjct: 311 PGAIKSGFKISGLTRFGPLDENAATTG 231
Score = 85.8 bits (182), Expect(3) = 1e-065
Identities = 37/65 (56%), Positives = 44/65 (67%)
Frame = +1 / +2
Query: 349 QAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRLVY 528
+A + AAIKSALMTTAY LDN+ ++D ATG S PF GAGHVDP AL+P L+Y
Sbjct: 449 KARSQTGAAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAGHVDPKKALNPGLIY 628
Query: 529 DAGSD 543
D D
Sbjct: 629 DISPD 643
Score = 58.5 bits (122), Expect(3) = 1e-065
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD I+ Y+ + +PTATI F GTV+G PS
Sbjct: 106 HLLPASAVGEKHGDAIKRYIASTKNPTATINFGGTVLGVKPS 231
Score = 51.7 bits (107), Expect(3) = 2e-032
Identities = 30/58 (51%), Positives = 36/58 (62%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAA 372
SS S S G RA LGST PAP + G+++ PVA S + LS AVVMSAD +AA
Sbjct: 645 SSGLMS*MSPGLRAFLGSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAA 472
Score = 25.7 bits (50), Expect(3) = 2e-032
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1 / -2
Query: 152 LENAATRGADGDLPMTVPRNTMVAVG 75
L+ A DG P TVP +VAVG
Sbjct: 257 LDENAATTGDGLTPSTVPPKLIVAVG 180
>gb|DR058926.1|DR058926 RTNIT1_14_E08.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_14_E08_A029 5', mRNA sequence
Length = 668
Score = 233 bits (507), Expect(2) = 8e-065
Identities = 96/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FSSRGPN PEILKPDVIAPGVNILA WTGA P+ L D RR +FNI+SGTS
Sbjct: 100 APVVASFSSRGPNPETPEILKPDVIAPGVNILAGWTGAVGPSSLPTDKRRTQFNILSGTS 279
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG+AALLR AHP+WSPAA++SALMTTAY DN G + D A+G STPF GAG
Sbjct: 280 MACPHVSGVAALLRGAHPQWSPAAVRSALMTTAYTQDNRGHRMIDEASGNASTPFDFGAG 459
Query: 487 HVDPNAALDPRLVYDAGSD 543
HV P A+DP L+YDAG++
Sbjct: 460 HVHPERAMDPGLIYDAGTE 516
Score = 147 bits (318), Expect = 3e-035
Identities = 76/140 (54%), Positives = 91/140 (65%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS PAS GS A G T PAP++ GVD+ P A S+++ P LS + AVV+ ADL AAGL
Sbjct: 518 SSVPAS*IRPGSIALSGCTCPAPKSKGVDALPEASSIIL*PLLS*V*AVVIRADLTAAGL 339
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
H GCA AA PLT GQ ++VP+ +LN L S+ R G APVH A + TPGA+TSGL
Sbjct: 338 HCGCAPLRRAATPLT*GQAIEVPDKILNCVLLLSVGRLDGPTAPVHPARIFTPGAITSGL 159
Query: 185 RISGAR*LGPRLENAATRGA 126
RISG LGP E AT GA
Sbjct: 158 RISGVSGLGPLEEKDATTGA 99
Score = 33.4 bits (67), Expect(2) = 8e-065
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1 / +1
Query: 37 GDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
G+ IR Y+ T P ATI GTV+G P+
Sbjct: 13 GELIRQYIATTKGPAATISGLGTVLGIKPA 102
>gb|DN464364.1|DN464364 EST960163 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJA87 5' end, mRNA sequence
Length = 849
Score = 246 bits (535), Expect = 8e-065
Identities = 102/137 (74%), Positives = 118/137 (86%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN A +ILKPDV+APGVNILAAWTGAA+P++L D RRV+FNIISGTS
Sbjct: 25 SPVVAAFSSRGPNPMAQQILKPDVVAPGVNILAAWTGAAAPSELKSDKRRVKFNIISGTS 204
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAALL+ AHP+WSPAAI+SALMTTAY +DNSG+ ++D+ATG ST F GAG
Sbjct: 205 MSCPHVSGLAALLKGAHPDWSPAAIRSALMTTAYTVDNSGKPLRDVATGAPSTAFDHGAG 384
Query: 487 HVDPNAALDPRLVYDAG 537
HVDP AL+P LVYD G
Sbjct: 385 HVDPEKALNPGLVYDMG 435
Score = 174 bits (376), Expect = 3e-043
Identities = 86/136 (63%), Positives = 95/136 (69%)
Frame = -1 / -2
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S TS G A GST PAP +N VD PVA S PELS +YAVVMSAD +AAGL SG
Sbjct: 434 PMS*TSPGLSAFSGSTWPAPWSNAVDGAPVATSRRGFPELSTVYAVVMSADRMAAGLQSG 255
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRIS 177
CA S+AARPLTCG D++VPE++LN TR S+ S G AAPV AA M TPGA TSG RI
Sbjct: 254 CAPFSNAARPLTCGHDIEVPEIILNFTRRLSLFSSDGAAAPVQAARMFTPGATTSGFRIC 75
Query: 176 GAR*LGPRLENAATRG 129
A LGPR ENAAT G
Sbjct: 74 CAMGLGPREENAATTG 27
>gb|DR019118.1|DR019118 STRS1_27_H10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_27_H10_A034 5', mRNA sequence
Length = 763
Score = 246 bits (535), Expect = 8e-065
Identities = 102/137 (74%), Positives = 118/137 (86%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN A +ILKPDV+APGVNILAAWTGAA+P++L D RRV+FNIISGTS
Sbjct: 33 SPVVAAFSSRGPNPMAQQILKPDVVAPGVNILAAWTGAAAPSELKSDKRRVKFNIISGTS 212
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAALL+ AHP+WSPAAI+SALMTTAY +DNSG+ ++D+ATG ST F GAG
Sbjct: 213 MSCPHVSGLAALLKGAHPDWSPAAIRSALMTTAYTVDNSGKPLRDVATGAPSTAFDHGAG 392
Query: 487 HVDPNAALDPRLVYDAG 537
HVDP AL+P LVYD G
Sbjct: 393 HVDPEKALNPGLVYDMG 443
Score = 174 bits (376), Expect = 3e-043
Identities = 86/136 (63%), Positives = 95/136 (69%)
Frame = -1 / -1
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S TS G A GST PAP +N VD PVA S PELS +YAVVMSAD +AAGL SG
Sbjct: 442 PMS*TSPGLSAFSGSTWPAPWSNAVDGAPVATSRRGFPELSTVYAVVMSADRMAAGLQSG 263
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRIS 177
CA S+AARPLTCG D++VPE++LN TR S+ S G AAPV AA M TPGA TSG RI
Sbjct: 262 CAPFSNAARPLTCGHDIEVPEIILNFTRRLSLFSSDGAAAPVQAARMFTPGATTSGFRIC 83
Query: 176 GAR*LGPRLENAATRG 129
A LGPR ENAAT G
Sbjct: 82 CAMGLGPREENAATTG 35
>gb|DR117877.1|DR117877 RTMG1_9_F09.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_9_F09_A029 5', mRNA sequence
Length = 649
Score = 219 bits (476), Expect(2) = 1e-064
Identities = 91/130 (70%), Positives = 103/130 (79%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FSSRGPN PEILKPDVIAPGVNILA WTGA P+ L D RR +FNI+SGTS
Sbjct: 260 APVVASFSSRGPNPETPEILKPDVIAPGVNILAGWTGAVGPSSLPTDKRRTQFNILSGTS 439
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG+AALLR AHP+WSPAA++SALMTTAY DN G + D A+G STPF GAG
Sbjct: 440 MACPHVSGVAALLRGAHPQWSPAAVRSALMTTAYTQDNRGHRMIDEASGNASTPFDFGAG 619
Query: 487 HVDPNAALDP 516
HV P A+DP
Sbjct: 620 HVHPERAMDP 649
Score = 142 bits (306), Expect = 1e-033
Identities = 71/130 (54%), Positives = 86/130 (66%)
Frame = -1 / -2
Query: 515 GSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSA 336
GS A G T PAP++ GVD+ P A S+++ P LS + AVV+ ADL AAGLH GCA A
Sbjct: 648 GSIALSGCTCPAPKSKGVDALPEASSIIL*PLLS*V*AVVIRADLTAAGLHCGCAPLRRA 469
Query: 335 ARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGP 156
A PLT GQ ++VP+ +LN L S+ R G APVH A + TPGA+TSGLRISG LGP
Sbjct: 468 ATPLT*GQAIEVPDKILNCVLLLSVGRLDGPTAPVHPARIFTPGAITSGLRISGVSGLGP 289
Query: 155 RLENAATRGA 126
E AT GA
Sbjct: 288 LEEKDATTGA 259
Score = 46.7 bits (96), Expect(2) = 1e-064
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
H++P + VG K G+ IR Y+ T P ATI GTV+G P+
Sbjct: 137 HMLPTSAVGAKEGELIRQYIATTKGPAATISGLGTVLGIKPA 262
>gb|CF668754.1|CF668754 RTCNT1_38_A12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_38_A12_A029 5', mRNA sequence
Length = 819
Score = 219 bits (475), Expect(2) = 2e-064
Identities = 91/130 (70%), Positives = 103/130 (79%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FSSRGPN PEILKPDVIAPGVNILA WTGA P+ L D RR +FNI+SGTS
Sbjct: 428 APVVASFSSRGPNPETPEILKPDVIAPGVNILARWTGAVGPSSLPTDKRRTQFNILSGTS 607
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG+AALLR AHP+WSPAA++SALMTTAY DN G + D A+G STPF GAG
Sbjct: 608 MACPHVSGVAALLRGAHPQWSPAAVRSALMTTAYTQDNRGHRMIDEASGNASTPFDFGAG 787
Query: 487 HVDPNAALDP 516
HV P A+DP
Sbjct: 788 HVHPERAMDP 817
Score = 142 bits (306), Expect = 1e-033
Identities = 71/130 (54%), Positives = 86/130 (66%)
Frame = -1 / -1
Query: 515 GSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSA 336
GS A G T PAP++ GVD+ P A S+++ P LS + AVV+ ADL AAGLH GCA A
Sbjct: 816 GSIALSGCTCPAPKSKGVDALPEASSIIL*PLLS*V*AVVIRADLTAAGLHCGCAPLRRA 637
Query: 335 ARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGP 156
A PLT GQ ++VP+ +LN L S+ R G APVH A + TPGA+TSGLRISG LGP
Sbjct: 636 ATPLT*GQAIEVPDKILNCVLLLSVGRLDGPTAPVHRARIFTPGAITSGLRISGVSGLGP 457
Query: 155 RLENAATRGA 126
E AT GA
Sbjct: 456 LEEKDATTGA 427
Score = 46.7 bits (96), Expect(2) = 2e-064
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
H++P + VG K G+ IR Y+ T P ATI GTV+G P+
Sbjct: 305 HMLPTSAVGAKEGELIRQYIATTKGPAATISGLGTVLGIKPA 430
>gb|CO200548.1|CO200548 GEO2_8_C10.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_8_C10_A032 3', mRNA sequence
Length = 897
Score = 232 bits (503), Expect(2) = 7e-064
Identities = 97/139 (69%), Positives = 111/139 (79%)
Frame = +1 / -2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 833 SPVVAAFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTS 654
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S PF GAG
Sbjct: 653 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAG 474
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP AL+P L+YD D
Sbjct: 473 HVDPKKALNPGLIYDISPD 417
Score = 150 bits (324), Expect(2) = 7e-038
Identities = 79/139 (56%), Positives = 91/139 (65%)
Frame = -1 / +1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S S G RA LGST PAP + G+++ PVA S + LS AVVMSAD +AAGL
Sbjct: 415 SSGLMS*MSPGLRAFLGSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGL 594
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A SAA PLTCG D++VPE MLN TRL S VG A P HAA +L+PGA+TSG
Sbjct: 595 QSGNAPFISAAMPLTCGHDIEVPERMLNLTRL*SSLSPVGPATPDHAARILSPGAITSGF 774
Query: 185 RISGAR*LGPRLENAATRG 129
+ISG GP ENAAT G
Sbjct: 775 KISGLTRFGPLDENAATTG 831
Score = 32.1 bits (64), Expect(2) = 7e-064
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1 / -2
Query: 67 DPSPTATIVFRGTVIGKSPS 126
D +PTATI F GTV+G PS
Sbjct: 890 DKNPTATINFGGTVLGVKPS 831
Score = 25.7 bits (50), Expect(2) = 7e-038
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1 / +1
Query: 152 LENAATRGADGDLPMTVPRNTMVAVG 75
L+ A DG P TVP +VAVG
Sbjct: 805 LDENAATTGDGLTPSTVPPKLIVAVG 882
>gb|CO200952.1|CO200952 RTCNT2_2_D10.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_2_D10_A029 5', mRNA sequence
Length = 745
Score = 219 bits (475), Expect(2) = 2e-063
Identities = 95/139 (68%), Positives = 108/139 (77%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FS+RGPN EILKPD+IAPGVNILAAWT A P+ L +D RR EFNIISGTS
Sbjct: 102 APVVASFSARGPNPETVEILKPDIIAPGVNILAAWTDAIGPSGLSLDRRRTEFNIISGTS 281
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG+AALL+ AHP+WSPAAIKSALMTTAY DN + + D ATG ST G+G
Sbjct: 282 MACPHVSGVAALLKGAHPDWSPAAIKSALMTTAYIHDNRLQPLIDEATGNASTAKDFGSG 461
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP A+DP LVYD G D
Sbjct: 462 HVDPQKAMDPGLVYDLGVD 518
Score = 144 bits (310), Expect = 3e-034
Identities = 78/140 (55%), Positives = 91/140 (65%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS P S TS GS A GST*P P++ V++ PVA S+ LS + AVV+SAD +AAGL
Sbjct: 520 SSTPKS*TSPGSMAFCGST*PEPKSFAVEAFPVASSIKGWSLLS*M*AVVISADFMAAGL 341
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A S+AA PLT GQ M+VPE++LNS RL S G A V AA M TPGA+ SGL
Sbjct: 340 QSG*APLSNAATPLT*GQAMEVPEIILNSVRLRSSESPDGPIASVQAARMFTPGAIMSGL 161
Query: 185 RISGAR*LGPRLENAATRGA 126
RIS LGP EN AT GA
Sbjct: 160 RISTVSGLGPLAENEATTGA 101
Score = 43.0 bits (88), Expect(2) = 2e-063
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1 / +3
Query: 25 GQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
G GD IR Y+ + SPTATI F GT +G P+
Sbjct: 3 GSAAGDSIRRYILSSKSPTATITFHGTELGVKPA 104
>gb|CN783734.1|CN783734 EST782425 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAC41 5' end, mRNA sequence
Length = 987
Score = 240 bits (522), Expect = 5e-063
Identities = 99/132 (75%), Positives = 114/132 (86%)
Frame = +1 / +1
Query: 142 AFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPH 321
AFSSRGPN A +ILKPDV+APGVNILAAWTGAA+P++L D RRV+FNIISGTSMSCPH
Sbjct: 1 AFSSRGPNPMAQQILKPDVVAPGVNILAAWTGAAAPSELKSDKRRVKFNIISGTSMSCPH 180
Query: 322 VSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPN 501
VSGLAALL+ AHP+WSPAAI+SALMTTAY +DNSG+ ++D+ATG ST F GAGHVDP
Sbjct: 181 VSGLAALLKGAHPDWSPAAIRSALMTTAYTVDNSGKPLRDVATGAPSTAFDHGAGHVDPE 360
Query: 502 AALDPRLVYDAG 537
AL+P LVYD G
Sbjct: 361 KALNPGLVYDMG 396
Score = 166 bits (358), Expect = 8e-041
Identities = 82/131 (62%), Positives = 91/131 (69%)
Frame = -1 / -2
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S TS G A GST PAP +N VD PVA S PELS +YAVVMSAD +AAGL SG
Sbjct: 395 PMS*TSPGLSAFSGSTWPAPWSNAVDGAPVATSRRGFPELSTVYAVVMSADRMAAGLQSG 216
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRIS 177
CA S+AARPLTCG D++VPE++LN TR S+ S G AAPV AA M TPGA TSG RI
Sbjct: 215 CAPFSNAARPLTCGHDIEVPEIILNFTRRLSLFSSDGAAAPVQAARMFTPGATTSGFRIC 36
Query: 176 GAR*LGPRLEN 144
A LGPR EN
Sbjct: 35 CAMGLGPREEN 3
>gb|DT625556.1|DT625556 EST1157480 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA125 5' end, mRNA sequence
Length = 930
Score = 240 bits (522), Expect = 5e-063
Identities = 99/132 (75%), Positives = 114/132 (86%)
Frame = +1 / +1
Query: 142 AFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPH 321
AFSSRGPN A +ILKPDV+APGVNILAAWTGAA+P++L D RRV+FNIISGTSMSCPH
Sbjct: 1 AFSSRGPNPMAQQILKPDVVAPGVNILAAWTGAAAPSELKSDKRRVKFNIISGTSMSCPH 180
Query: 322 VSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPN 501
VSGLAALL+ AHP+WSPAAI+SALMTTAY +DNSG+ ++D+ATG ST F GAGHVDP
Sbjct: 181 VSGLAALLKGAHPDWSPAAIRSALMTTAYTVDNSGKPLRDVATGAPSTAFDHGAGHVDPE 360
Query: 502 AALDPRLVYDAG 537
AL+P LVYD G
Sbjct: 361 KALNPGLVYDMG 396
Score = 166 bits (358), Expect = 8e-041
Identities = 82/131 (62%), Positives = 91/131 (69%)
Frame = -1 / -2
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S TS G A GST PAP +N VD PVA S PELS +YAVVMSAD +AAGL SG
Sbjct: 395 PMS*TSPGLSAFSGSTWPAPWSNAVDGAPVATSRRGFPELSTVYAVVMSADRMAAGLQSG 216
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRIS 177
CA S+AARPLTCG D++VPE++LN TR S+ S G AAPV AA M TPGA TSG RI
Sbjct: 215 CAPFSNAARPLTCGHDIEVPEIILNFTRRLSLFSSDGAAAPVQAARMFTPGATTSGFRIC 36
Query: 176 GAR*LGPRLEN 144
A LGPR EN
Sbjct: 35 CAMGLGPREEN 3
>gb|CX648612.1|CX648612 COLD1_29_F08.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_29_F08_A029 5', mRNA sequence
Length = 752
Score = 201 bits (435), Expect(2) = 2e-062
Identities = 85/119 (71%), Positives = 97/119 (81%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 395 SPVVAAFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTS 574
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGA 483
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S PF GA
Sbjct: 575 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGA 751
Score = 134 bits (289), Expect(2) = 8e-037
Identities = 67/118 (56%), Positives = 79/118 (66%)
Frame = -1 / -3
Query: 482 APRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMD 303
AP + G+++ PVA S + LS AVVMSAD +AAGL SG A SAA PLTCG D++
Sbjct: 750 APWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGLQSGNAPFISAAMPLTCGHDIE 571
Query: 302 VPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRG 129
VPE MLN TRL S VG A P HAA +L+PGA+TSG +ISG GP ENAAT G
Sbjct: 570 VPERMLNLTRL*SSLSPVGPATPDHAARILSPGAITSGFKISGLTRFGPLDENAATTG 397
Score = 58.5 bits (122), Expect(2) = 2e-062
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD I+ Y+ + +PTATI F GTV+G PS
Sbjct: 272 HLLPASAVGEKHGDAIKRYIASTKNPTATINFGGTVLGVKPS 397
Score = 38.0 bits (77), Expect(2) = 8e-037
Identities = 23/50 (46%), Positives = 25/50 (50%)
Frame = -1 / -3
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
L+ A DG P TVP +VAVG * LI SP F PT AG R
Sbjct: 423 LDENAATTGDGLTPSTVPPKLIVAVGFFVEAM*RLIASPCFSPTADAGRR 274
>gb|DR120066.1|DR120066 RTMG1_27_G08.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_27_G08_A029 3', mRNA sequence
Length = 516
Score = 229 bits (497), Expect(2) = 2e-062
Identities = 96/139 (69%), Positives = 110/139 (79%)
Frame = +1 / -3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPD IAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 451 SPVVAAFSSRGPNLVNPEILKPDFIAPGLNILAAWSGVAGPTGLSDDRRRVKFNILSGTS 272
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S PF GAG
Sbjct: 271 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAG 92
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP AL+P L+YD D
Sbjct: 91 HVDPKKALNPGLIYDISPD 35
Score = 149 bits (322), Expect(2) = 1e-037
Identities = 78/139 (56%), Positives = 90/139 (64%)
Frame = -1 / +3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S S G RA LGST PAP + G+++ PVA S + LS AVVMSAD +AAGL
Sbjct: 33 SSGLMS*MSPGLRAFLGSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGL 212
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A SAA PLTCG D++VPE MLN TRL S VG A P HAA +L+PGA+ SG
Sbjct: 213 QSGNAPFISAAMPLTCGHDIEVPERMLNLTRLRSSLSPVGPATPDHAARILSPGAIKSGF 392
Query: 185 RISGAR*LGPRLENAATRG 129
+ISG GP ENAAT G
Sbjct: 393 KISGLTRFGPLDENAATTG 449
Score = 29.8 bits (59), Expect(2) = 2e-062
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / -3
Query: 73 SPTATIVFRGTVIGKSPS 126
+PTATI F GTV+G PS
Sbjct: 502 NPTATINFGGTVLGVKPS 449
Score = 25.7 bits (50), Expect(2) = 1e-037
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1 / +3
Query: 152 LENAATRGADGDLPMTVPRNTMVAVG 75
L+ A DG P TVP +VAVG
Sbjct: 423 LDENAATTGDGLTPSTVPPKLIVAVG 500
>gb|CF668950.1|CF668950 RTCNT1_39_D10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_39_D10_A029 5', mRNA sequence
Length = 799
Score = 142 bits (306), Expect(2) = 6e-062
Identities = 57/91 (62%), Positives = 69/91 (75%)
Frame = +1 / +3
Query: 265 DSRRVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDL 444
D RV+FNI+SGTSMSCPHV+G+AAL+R AHP W+PAAIKSALMT++ DN I D
Sbjct: 522 DKERVDFNILSGTSMSCPHVAGIAALIRAAHPAWTPAAIKSALMTSSAPFDNRKSPISDS 701
Query: 445 ATGVESTPFVRGAGHVDPNAALDPRLVYDAG 537
T + + F GAGHV+PNAALDP L+YD G
Sbjct: 702 FTALPANAFAMGAGHVNPNAALDPGLIYDLG 794
Score = 115 bits (247), Expect(2) = 6e-062
Identities = 51/87 (58%), Positives = 59/87 (67%)
Frame = +1 / +3
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPSAPRVAAFSSRGPNYRAPE 180
H++PATMV K G+ I+ Y+ +P ATI G + AP VAAFSSRGPN PE
Sbjct: 264 HVLPATMVDSKAGEYIKAYINATRNPIATIKSEGLTVVGKARAPVVAAFSSRGPNTVVPE 443
Query: 181 ILKPDVIAPGVNILAAWTGAASPTDLD 261
ILKPD+IAPGVNILAAWTG A PT D
Sbjct: 444 ILKPDLIAPGVNILAAWTGHAGPTYSD 524
Score = 81.3 bits (172), Expect(2) = 2e-033
Identities = 44/86 (51%), Positives = 51/86 (59%)
Frame = -1 / -1
Query: 266 SMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRGADGDLPMTVPRNTM 87
S+S VG A PVHAA+MLTPGA+ SGLRISG GP ENAAT GA P + +
Sbjct: 529 SLSEYVGPACPVHAANMLTPGAIRSGLRISGTTVFGPLDENAATTGARAFPTTVSPSDLI 350
Query: 86 VAVGDGSVWT*YLILSPNFCPTIVAG 9
VA+G * + SP TIVAG
Sbjct: 349 VAMGFLVALI*AFMYSPALESTIVAG 272
Score = 80.4 bits (170), Expect(2) = 2e-033
Identities = 46/89 (51%), Positives = 52/89 (58%)
Frame = -1 / -1
Query: 542 SEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLH 363
S P S GSRAALG T*PAP V SL+ LS VM AD IAAG+H
Sbjct: 799 SIPRS*MRPGSRAALGFT*PAPIAKAFAGKAVKESLIGLLRLSNGAEDVMRADFIAAGVH 620
Query: 362 SGCAWRSSAARPLTCGQDMDVPEMMLNST 276
+G A R SAA P T GQD++VPE +L ST
Sbjct: 619 AG*AARISAAMPAT*GQDIEVPESILKST 533
>gb|CF478889.1|CF478889 RTWW3_15_G12.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_15_G12_A022 5', mRNA sequence
Length = 675
Score = 233 bits (507), Expect(2) = 6e-062
Identities = 96/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FSSRGPN PEILKPDVIAPGVNILA WTGA P+ L D RR +FNI+SGTS
Sbjct: 69 APVVASFSSRGPNPETPEILKPDVIAPGVNILAGWTGAVGPSSLPTDKRRTQFNILSGTS 248
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG+AALLR AHP+WSPAA++SALMTTAY DN G + D A+G STPF GAG
Sbjct: 249 MACPHVSGVAALLRGAHPQWSPAAVRSALMTTAYTQDNRGHRMIDEASGNASTPFDFGAG 428
Query: 487 HVDPNAALDPRLVYDAGSD 543
HV P A+DP L+YDAG++
Sbjct: 429 HVHPERAMDPGLIYDAGTE 485
Score = 147 bits (318), Expect = 3e-035
Identities = 76/140 (54%), Positives = 91/140 (65%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS PAS GS A G T PAP++ GVD+ P A S+++ P LS + AVV+ ADL AAGL
Sbjct: 487 SSVPAS*IRPGSIALSGCTCPAPKSKGVDALPEASSIIL*PLLS*V*AVVIRADLTAAGL 308
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
H GCA AA PLT GQ ++VP+ +LN L S+ R G APVH A + TPGA+TSGL
Sbjct: 307 HCGCAPLRRAATPLT*GQAIEVPDKILNCVLLLSVGRLDGPTAPVHPARIFTPGAITSGL 128
Query: 185 RISGAR*LGPRLENAATRGA 126
RISG LGP E AT GA
Sbjct: 127 RISGVSGLGPLEEKDATTGA 68
Score = 23.9 bits (46), Expect(2) = 6e-062
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1 / +3
Query: 58 VQTDPSPTATIVFRGTVIGKSPS 126
+ T P ATI GTV+G P+
Sbjct: 3 IATTKGPAATISGLGTVLGIKPA 71
>gb|BX676995.1|BX676995 BX676995 RN Pinus pinaster cDNA clone RN16A01, mRNA sequence
Length = 627
Score = 217 bits (470), Expect(2) = 8e-062
Identities = 94/139 (67%), Positives = 107/139 (76%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FS+RGPN EILKPD+IAPGVNILAAWT A P+ L D RR EFNIISGTS
Sbjct: 122 APVVASFSARGPNPETVEILKPDIIAPGVNILAAWTDAIGPSGLSFDRRRTEFNIISGTS 301
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG+AALL+ AHP+WSPAAIKSALMTTAY DN + + D ATG +T G+G
Sbjct: 302 MACPHVSGVAALLKGAHPDWSPAAIKSALMTTAYIHDNRLQPLIDEATGNAATAKDFGSG 481
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP A+DP LVYD G D
Sbjct: 482 HVDPQKAMDPGLVYDLGVD 538
Score = 141 bits (305), Expect = 2e-033
Identities = 78/140 (55%), Positives = 90/140 (64%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS P S TS GS A GST*P P++ V + PVA S+ LS + AVV+SAD +AAGL
Sbjct: 540 SSTPKS*TSPGSMAFCGST*PEPKSFAVAAFPVASSIKGWSLLS*M*AVVISADFMAAGL 361
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A S+AA PLT GQ M+VPE++LNS RL S G A V AA M TPGA+ SGL
Sbjct: 360 QSG*APLSNAATPLT*GQAMEVPEIILNSVRLRSNESPDGPIASVQAARMFTPGAIMSGL 181
Query: 185 RISGAR*LGPRLENAATRGA 126
RIS LGP EN AT GA
Sbjct: 180 RISTVSGLGPLAENEATTGA 121
Score = 40.3 bits (82), Expect(2) = 8e-062
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1 / +2
Query: 37 GDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
GD IR Y+ + +PTATI F GT +G P+
Sbjct: 35 GDSIRRYILSSKNPTATITFHGTELGVKPA 124
>gb|DN448826.1|DN448826 EST944625 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIC979 5' end, mRNA sequence
Length = 790
Score = 232 bits (503), Expect(2) = 2e-061
Identities = 97/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 45 SPVVAAFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTS 224
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S PF GAG
Sbjct: 225 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAG 404
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP AL+P L+YD D
Sbjct: 405 HVDPKKALNPGLIYDISPD 461
Score = 150 bits (324), Expect = 4e-036
Identities = 79/139 (56%), Positives = 91/139 (65%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S S G RA LGST PAP + G+++ PVA S + LS AVVMSAD +AAGL
Sbjct: 463 SSGLMS*MSPGLRAFLGSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGL 284
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A SAA PLTCG D++VPE MLN TRL S VG A P HAA +L+PGA+TSG
Sbjct: 283 QSGNAPFISAAMPLTCGHDIEVPERMLNLTRL*SSLSPVGPATPDHAARILSPGAITSGF 104
Query: 185 RISGAR*LGPRLENAATRG 129
+ISG GP ENAAT G
Sbjct: 103 KISGLTRFGPLDENAATTG 47
Score = 23.9 bits (46), Expect(2) = 2e-061
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 82 ATIVFRGTVIGKSPS 126
ATI F GTV+G PS
Sbjct: 3 ATINFGGTVLGVKPS 47
>gb|DN465331.1|DN465331 EST961130 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJO06 5' end, mRNA sequence
Length = 733
Score = 232 bits (503), Expect(2) = 2e-061
Identities = 97/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 45 SPVVAAFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTS 224
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S PF GAG
Sbjct: 225 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAG 404
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP AL+P L+YD D
Sbjct: 405 HVDPKKALNPGLIYDISPD 461
Score = 150 bits (324), Expect = 4e-036
Identities = 79/139 (56%), Positives = 91/139 (65%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S S G RA LGST PAP + G+++ PVA S + LS AVVMSAD +AAGL
Sbjct: 463 SSGLMS*MSPGLRAFLGSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGL 284
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A SAA PLTCG D++VPE MLN TRL S VG A P HAA +L+PGA+TSG
Sbjct: 283 QSGNAPFISAAMPLTCGHDIEVPERMLNLTRL*SSLSPVGPATPDHAARILSPGAITSGF 104
Query: 185 RISGAR*LGPRLENAATRG 129
+ISG GP ENAAT G
Sbjct: 103 KISGLTRFGPLDENAATTG 47
Score = 23.9 bits (46), Expect(2) = 2e-061
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 82 ATIVFRGTVIGKSPS 126
ATI F GTV+G PS
Sbjct: 3 ATINFGGTVLGVKPS 47
>gb|CO364097.1|CO364097 RTK1_13_E05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_13_E05_A029 5', mRNA sequence
Length = 850
Score = 233 bits (507), Expect = 5e-061
Identities = 96/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FSSRGPN PEILKPDVIAPGVNILA WTGA P+ L D RR +FNI+SGTS
Sbjct: 157 APVVASFSSRGPNPETPEILKPDVIAPGVNILAGWTGAVGPSSLPTDKRRTQFNILSGTS 336
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG+AALLR AHP+WSPAA++SALMTTAY DN G + D A+G STPF GAG
Sbjct: 337 MACPHVSGVAALLRGAHPQWSPAAVRSALMTTAYTQDNRGHRMIDEASGNASTPFDFGAG 516
Query: 487 HVDPNAALDPRLVYDAGSD 543
HV P A+DP L+YDAG++
Sbjct: 517 HVHPERAMDPGLIYDAGTE 573
Score = 147 bits (318), Expect = 3e-035
Identities = 76/140 (54%), Positives = 91/140 (65%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS PAS GS A G T PAP++ GVD+ P A S+++ P LS + AVV+ ADL AAGL
Sbjct: 575 SSVPAS*IRPGSIALSGCTCPAPKSKGVDALPEASSIIL*PLLS*V*AVVIRADLTAAGL 396
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
H GCA AA PLT GQ ++VP+ +LN L S+ R G APVH A + TPGA+TSGL
Sbjct: 395 HCGCAPLRRAATPLT*GQAIEVPDKILNCVLLLSVGRLDGPTAPVHPARIFTPGAITSGL 216
Query: 185 RISGAR*LGPRLENAATRGA 126
RISG LGP E AT GA
Sbjct: 215 RISGVSGLGPLEEKDATTGA 156
>gb|CO364241.1|CO364241 RTK1_14_C02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_14_C02_A029 5', mRNA sequence
Length = 871
Score = 233 bits (507), Expect = 5e-061
Identities = 96/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FSSRGPN PEILKPDVIAPGVNILA WTGA P+ L D RR +FNI+SGTS
Sbjct: 6 APVVASFSSRGPNPETPEILKPDVIAPGVNILAGWTGAVGPSSLPTDKRRTQFNILSGTS 185
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG+AALLR AHP+WSPAA++SALMTTAY DN G + D A+G STPF GAG
Sbjct: 186 MACPHVSGVAALLRGAHPQWSPAAVRSALMTTAYTQDNRGHRMIDEASGNASTPFDFGAG 365
Query: 487 HVDPNAALDPRLVYDAGSD 543
HV P A+DP L+YDAG++
Sbjct: 366 HVHPERAMDPGLIYDAGTE 422
Score = 147 bits (318), Expect = 3e-035
Identities = 76/140 (54%), Positives = 91/140 (65%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS PAS GS A G T PAP++ GVD+ P A S+++ P LS + AVV+ ADL AAGL
Sbjct: 424 SSVPAS*IRPGSIALSGCTCPAPKSKGVDALPEASSIIL*PLLS*V*AVVIRADLTAAGL 245
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
H GCA AA PLT GQ ++VP+ +LN L S+ R G APVH A + TPGA+TSGL
Sbjct: 244 HCGCAPLRRAATPLT*GQAIEVPDKILNCVLLLSVGRLDGPTAPVHPARIFTPGAITSGL 65
Query: 185 RISGAR*LGPRLENAATRGA 126
RISG LGP E AT GA
Sbjct: 64 RISGVSGLGPLEEKDATTGA 5
>gb|CF666491.1|CF666491 RTCNT1_23_E05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_23_E05_A029 5', mRNA sequence
Length = 727
Score = 195 bits (422), Expect(2) = 1e-060
Identities = 82/114 (71%), Positives = 94/114 (82%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 384 SPVVAAFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTS 563
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTP 468
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S P
Sbjct: 564 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNP 725
Score = 130 bits (280), Expect(2) = 1e-035
Identities = 65/113 (57%), Positives = 76/113 (67%)
Frame = -1 / -1
Query: 467 GVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMM 288
G+++ PVA S + LS AVVMSAD +AAGL SG A SAA PLTCG D++VPE M
Sbjct: 724 GLEALPVAESSRLLAVLSST*AVVMSADFMAAGLQSGNAPFISAAMPLTCGHDIEVPERM 545
Query: 287 LNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRG 129
LN TRL S VG A P HAA +L+PGA+TSG +ISG GP ENAAT G
Sbjct: 544 LNLTRL*SSLSPVGPATPDHAARILSPGAITSGFKISGLTRFGPLDENAATTG 386
Score = 58.5 bits (122), Expect(2) = 1e-060
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1 / +3
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD I+ Y+ + +PTATI F GTV+G PS
Sbjct: 261 HLLPASAVGEKHGDAIKRYIASTKNPTATINFGGTVLGVKPS 386
Score = 38.0 bits (77), Expect(2) = 1e-035
Identities = 23/50 (46%), Positives = 25/50 (50%)
Frame = -1 / -1
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
L+ A DG P TVP +VAVG * LI SP F PT AG R
Sbjct: 412 LDENAATTGDGLTPSTVPPKLIVAVGFFVEAM*RLIASPCFSPTADAGRR 263
>gb|CF479066.1|CF479066 RTWW3_21_B04.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_21_B04_A022 5', mRNA sequence
Length = 732
Score = 232 bits (503), Expect = 2e-060
Identities = 97/139 (69%), Positives = 111/139 (79%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 35 SPVVAAFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTS 214
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S PF GAG
Sbjct: 215 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAG 394
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP AL+P L+YD D
Sbjct: 395 HVDPKKALNPGLIYDISPD 451
Score = 150 bits (324), Expect = 4e-036
Identities = 79/139 (56%), Positives = 91/139 (65%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S S G RA LGST PAP + G+++ PVA S + LS AVVMSAD +AAGL
Sbjct: 453 SSGLMS*MSPGLRAFLGSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGL 274
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A SAA PLTCG D++VPE MLN TRL S VG A P HAA +L+PGA+TSG
Sbjct: 273 QSGNAPFISAAMPLTCGHDIEVPERMLNLTRL*SSLSPVGPATPDHAARILSPGAITSGF 94
Query: 185 RISGAR*LGPRLENAATRG 129
+ISG GP ENAAT G
Sbjct: 93 KISGLTRFGPLDENAATTG 37
>gb|DR047483.1|DR047483 RTBOR1_1_G09.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_1_G09_A029 3', mRNA sequence
Length = 758
Score = 232 bits (503), Expect = 2e-060
Identities = 97/139 (69%), Positives = 111/139 (79%)
Frame = +1 / -2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 739 SPVVAAFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTS 560
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S PF GAG
Sbjct: 559 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAG 380
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP AL+P L+YD D
Sbjct: 379 HVDPKKALNPGLIYDISPD 323
Score = 150 bits (324), Expect = 4e-036
Identities = 79/139 (56%), Positives = 91/139 (65%)
Frame = -1 / +3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S S G RA LGST PAP + G+++ PVA S + LS AVVMSAD +AAGL
Sbjct: 321 SSGLMS*MSPGLRAFLGSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGL 500
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A SAA PLTCG D++VPE MLN TRL S VG A P HAA +L+PGA+TSG
Sbjct: 501 QSGNAPFISAAMPLTCGHDIEVPERMLNLTRL*SSLSPVGPATPDHAARILSPGAITSGF 680
Query: 185 RISGAR*LGPRLENAATRG 129
+ISG GP ENAAT G
Sbjct: 681 KISGLTRFGPLDENAATTG 737
>gb|CF471972.1|CF471972 RTDS1_7_G09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_7_G09_A015 5', mRNA sequence
Length = 763
Score = 191 bits (415), Expect(2) = 9e-060
Identities = 80/109 (73%), Positives = 92/109 (84%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTS
Sbjct: 437 SPVVAAFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTS 616
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATG 453
MSCPHVSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG
Sbjct: 617 MSCPHVSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTARNLEDSATG 763
Score = 126 bits (272), Expect(2) = 2e-034
Identities = 64/108 (59%), Positives = 72/108 (66%)
Frame = -1 / -2
Query: 452 PVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNSTR 273
PVA S + LS AVVMSAD +AAGL SG A SAA PLTCG D++VPE MLN TR
Sbjct: 762 PVAESSRLRAVLSST*AVVMSADFMAAGLQSGNAPFISAAMPLTCGHDIEVPERMLNLTR 583
Query: 272 LESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRG 129
L S VG A P HAA +L+PGA+TSG +ISG GP ENAAT G
Sbjct: 582 L*SSLSPVGPATPDHAARILSPGAITSGFKISGLTRFGPLDENAATTG 439
Score = 58.5 bits (122), Expect(2) = 9e-060
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD I+ Y+ + +PTATI F GTV+G PS
Sbjct: 314 HLLPASAVGEKHGDAIKRYIASTKNPTATINFGGTVLGVKPS 439
Score = 38.0 bits (77), Expect(2) = 2e-034
Identities = 23/50 (46%), Positives = 25/50 (50%)
Frame = -1 / -2
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
L+ A DG P TVP +VAVG * LI SP F PT AG R
Sbjct: 465 LDENAATTGDGLTPSTVPPKLIVAVGFFVEAM*RLIASPCFSPTADAGRR 316
>gb|DN456270.1|DN456270 EST952069 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGN21 5' end, mRNA sequence
Length = 914
Score = 183 bits (396), Expect(2) = 4e-059
Identities = 76/94 (80%), Positives = 86/94 (91%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN A +ILKPDV+APGVNILAAWTGAA+P++L D RRV+FNIISGTS
Sbjct: 629 SPVVAAFSSRGPNPMAQQILKPDVVAPGVNILAAWTGAAAPSELKSDKRRVKFNIISGTS 808
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAY 408
MSCPHVSGLAALL+ AHP+WSPAAI+SALMTTAY
Sbjct: 809 MSCPHVSGLAALLKGAHPDWSPAAIRSALMTTAY 910
Score = 134 bits (289), Expect(2) = 1e-039
Identities = 63/94 (67%), Positives = 71/94 (75%)
Frame = -1 / -3
Query: 410 LYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPV 231
+YAVVMSAD +AAGL SGCA S+AARPLTCG D++VPE++LN TR S+ S G AAPV
Sbjct: 912 VYAVVMSADRMAAGLQSGCAPFSNAARPLTCGHDIEVPEIILNFTRRLSLFSSDGAAAPV 733
Query: 230 HAASMLTPGAMTSGLRISGAR*LGPRLENAATRG 129
AA M TPGA TSG RI A LGPR ENAAT G
Sbjct: 732 QAARMFTPGATTSGFRICCAMGLGPREENAATTG 631
Score = 64.9 bits (136), Expect(2) = 4e-059
Identities = 26/42 (61%), Positives = 34/42 (80%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA+ VG+K GD IR Y+ T+P+PTATI F+GTV+G PS
Sbjct: 506 HLLPASAVGKKNGDLIRNYLLTNPNPTATIQFKGTVLGIKPS 631
Score = 47.6 bits (98), Expect(2) = 1e-039
Identities = 25/49 (51%), Positives = 30/49 (61%)
Frame = -1 / -3
Query: 149 ENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
E A +G +P TVP N +VAVG G V *+LI SP F PT AG+R
Sbjct: 654 EENAATTGEGLMPKTVPLN*IVAVGLGFVSK*FLIKSPFFFPTAEAGSR 508
>gb|CV135535.1|CV135535 EST846744 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PICMD22 5' end, mRNA sequence
Length = 872
Score = 226 bits (490), Expect = 1e-058
Identities = 94/134 (70%), Positives = 107/134 (79%)
Frame = +1 / +3
Query: 142 AFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPH 321
AFSSRGPN PEILKPDVIAPG+NILAAW+G A PT L D RRV+FNI+SGTSMSCPH
Sbjct: 3 AFSSRGPNLVNPEILKPDVIAPGLNILAAWSGVAGPTGLSDDQRRVKFNILSGTSMSCPH 182
Query: 322 VSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPN 501
VSG+AAL++ A P+WSPAAIKSALMTTAY LDN+ ++D ATG S PF GAGHVDP
Sbjct: 183 VSGIAALMKGAFPDWSPAAIKSALMTTAYVLDNTASNLEDSATGNASNPFDHGAGHVDPK 362
Query: 502 AALDPRLVYDAGSD 543
AL+P L+YD D
Sbjct: 363 KALNPGLIYDISPD 404
Score = 144 bits (310), Expect = 3e-034
Identities = 76/135 (56%), Positives = 88/135 (65%)
Frame = -1 / -2
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S S G RA LGST PAP + G+++ PVA S + LS AVVMSAD +AAGL
Sbjct: 406 SSGLMS*MSPGLRAFLGSTCPAPWSKGLEALPVAESSRLLAVLSST*AVVMSADFMAAGL 227
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A SAA PLTCG D++VPE MLN TRL S VG A P HAA +L+PGA+TSG
Sbjct: 226 QSGNAPFISAAMPLTCGHDIEVPERMLNLTRL*SSLSPVGPATPDHAARILSPGAITSGF 47
Query: 185 RISGAR*LGPRLENA 141
+ISG GP ENA
Sbjct: 46 KISGLTRFGPLDENA 2
>gb|DR090705.1|DR090705 RTAL1_16_H03.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_16_H03_A029 5', mRNA sequence
Length = 791
Score = 198 bits (430), Expect(2) = 3e-058
Identities = 82/115 (71%), Positives = 93/115 (80%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FSSRGPN PEILKPDVIAPGVNILA WTGA P+ L D RR +FNI+SGTS
Sbjct: 445 APVVASFSSRGPNPETPEILKPDVIAPGVNILAGWTGAVGPSSLPTDKRRTQFNILSGTS 624
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPF 471
M+CPHVSG+AALLR AHP+WSPAA++SALMTTAY DN G + D A+G STPF
Sbjct: 625 MACPHVSGVAALLRGAHPQWSPAAVRSALMTTAYTQDNRGHRMIDEASGNASTPF 789
Score = 126 bits (272), Expect = 6e-029
Identities = 63/116 (54%), Positives = 77/116 (66%)
Frame = -1 / -1
Query: 473 TNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPE 294
+ GVD+ P A S+++ P LS + AVV+ ADL AAGLH GCA AA PLT GQ ++VP+
Sbjct: 791 SKGVDALPEASSIIL*PLLS*V*AVVIRADLTAAGLHCGCAPLRRAATPLT*GQAIEVPD 612
Query: 293 MMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRGA 126
+LN L S+ R G APVH A + TPGA+TSGLRISG LGP E AT GA
Sbjct: 611 KILNCVLLLSVGRLDGPTAPVHPARIFTPGAITSGLRISGVSGLGPLEEKDATTGA 444
Score = 46.7 bits (96), Expect(2) = 3e-058
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
H++P + VG K G+ IR Y+ T P ATI GTV+G P+
Sbjct: 322 HMLPTSAVGAKEGELIRQYIATTKGPAATISGLGTVLGIKPA 447
>gb|DR118515.1|DR118515 RTMG1_17_B05.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_B05_A029 5', mRNA sequence
Length = 678
Score = 224 bits (486), Expect = 4e-058
Identities = 92/125 (73%), Positives = 107/125 (85%)
Frame = +1 / +3
Query: 163 NYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAAL 342
N A +ILKPDV+APGVNILAAWTGAA+P++L D RRV+FNIISGTSMSCPHVSGLAAL
Sbjct: 18 NPMAQQILKPDVVAPGVNILAAWTGAAAPSELKSDKRRVKFNIISGTSMSCPHVSGLAAL 197
Query: 343 LRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRL 522
L+ AHP+WSPAAI+SALMTTAY +DNSG+ ++D+ATG ST F GAGHVDP AL+P L
Sbjct: 198 LKGAHPDWSPAAIRSALMTTAYTVDNSGKPLRDVATGAPSTAFDHGAGHVDPEKALNPGL 377
Query: 523 VYDAG 537
VYD G
Sbjct: 378 VYDMG 392
Score = 154 bits (333), Expect = 2e-037
Identities = 75/119 (63%), Positives = 84/119 (70%)
Frame = -1 / -3
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S TS G A GST PAP +N VD PVA S PELS +YAVVMSAD +AAGL SG
Sbjct: 391 PMS*TSPGLSAFSGSTWPAPWSNAVDGAPVATSRRGFPELSTVYAVVMSADRMAAGLQSG 212
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRI 180
CA S+AARPLTCG D++VPE++LN TR S+ S G AAPV AA M TPGA TSG RI
Sbjct: 211 CAPFSNAARPLTCGHDIEVPEIILNFTRRLSLFSSDGAAAPVQAARMFTPGATTSGFRI 35
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.316 0.132 0.393
Matrix: BLOSUM62
Number of Hits to DB: 186,320,257
Number of Sequences: 355925
Number of extensions: 1907156
Number of successful extensions: 26280
Number of sequences better than 1.0e-020: 225
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 6955376205
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)