TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3977955.2.1
(867 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR017554.1|DR017554 STRS1_17_B10.b1_A034 Shoot tip pitch... 135 9e-064
gb|DR080638.1|DR080638 RTFEPL1_24_D06.b1_A029 Roots plus ad... 135 9e-064
gb|DR060376.1|DR060376 RTNIT1_27_A07.g1_A029 Roots minus ni... 133 6e-063
gb|DR118854.1|DR118854 RTMG1_19_D01.g1_A029 Roots minus mag... 133 6e-063
gb|CF666126.1|CF666126 RTCNT1_21_B03.b1_A029 Root control P... 133 6e-063
gb|DR102684.1|DR102684 STRR1_83_B06.b1_A033 Stem Response R... 133 6e-063
gb|DR119446.1|DR119446 RTMG1_23_G05.b1_A029 Roots minus mag... 133 6e-063
gb|CX653111.1|CX653111 COLD1_63_B01.g1_A029 Root cold Pinus... 132 3e-062
gb|DR078427.1|DR078427 RTFEPL1_4_D03.b1_A029 Roots plus add... 133 7e-062
gb|DR166604.1|DR166604 RTPHOS1_13_E03.b1_A029 Roots minus p... 128 2e-061
gb|CO361821.1|CO361821 NDL2_7_G05.b1_A029 Needles control 2... 131 4e-060
gb|CO361900.1|CO361900 NDL2_7_G05.g1_A029 Needles control 2... 131 4e-060
gb|DR011239.1|DR011239 HEAT1_4_A11.g1_A029 Root at 37 C for... 131 6e-060
gb|DR022117.1|DR022117 STRS1_49_A09.b1_A034 Shoot tip pitch... 130 8e-060
gb|DR015139.1|DR015139 STRS1_1_E12.g1_A034 Shoot tip pitch ... 135 5e-059
gb|DR013467.1|DR013467 HEAT1_19_B05.g1_A029 Root at 37 C fo... 127 7e-058
gb|DR023771.1|DR023771 STRS1_60_A08.b1_A034 Shoot tip pitch... 129 3e-057
gb|DR102882.1|DR102882 STRR1_84_G03.g1_A033 Stem Response R... 129 3e-057
gb|CF389533.1|CF389533 RTDR2_8_D02.b1_A021 Loblolly pine ro... 129 3e-057
gb|DR070485.1|DR070485 RTDK1_13_D04.g1_A029 Roots, dark Pin... 127 5e-057
gb|DR119772.1|DR119772 RTMG1_25_A03.g2_A029 Roots minus mag... 120 2e-056
gb|DR019776.1|DR019776 STRS1_32_H01.b1_A034 Shoot tip pitch... 132 6e-056
gb|DR022182.1|DR022182 STRS1_49_H09.b1_A034 Shoot tip pitch... 133 2e-055
gb|DR097887.1|DR097887 STRR1_37_E09.g1_A033 Stem Response R... 133 2e-055
gb|CX653033.1|CX653033 COLD1_63_B01.b1_A029 Root cold Pinus... 132 3e-055
gb|BG318166.1|BG318166 NXPV_011_B08_F NXPV (Nsf Xylem Plani... 133 5e-055
gb|CF395320.1|CF395320 RTDS2_11_C04.b1_A021 Drought-stresse... 133 1e-054
gb|DR101069.1|DR101069 STRR1_70_G10.b1_A033 Stem Response R... 120 2e-054
gb|CO175095.1|CO175095 NDL1_48_H04.b1_A029 Needles control ... 133 2e-054
gb|DR386720.1|DR386720 RTHG1_17_B11.b1_A029 Roots plus adde... 131 3e-054
gb|DR080640.1|DR080640 RTFEPL1_24_D09.b1_A029 Roots plus ad... 113 3e-054
gb|DR080710.1|DR080710 RTFEPL1_24_D09.g1_A029 Roots plus ad... 113 3e-054
gb|BQ701382.1|BQ701382 NXSI_063_E07_F NXSI (Nsf Xylem Side ... 131 2e-053
gb|DR071903.1|DR071903 RTDK1_22_G03.g1_A029 Roots, dark Pin... 116 2e-053
gb|CO170015.1|CO170015 NDL1_11_D11.b1_A029 Needles control ... 133 3e-053
gb|BX679734.1|BX679734 BX679734 RS Pinus pinaster cDNA clon... 124 3e-053
gb|CF471803.1|CF471803 RTDS1_6_H07.g1_A015 Drought-stressed... 133 6e-053
gb|CV034683.1|CV034683 RTNACL1_10_H03.g1_A029 Roots plus ad... 131 8e-053
gb|DR100880.1|DR100880 STRR1_69_B01.b1_A033 Stem Response R... 120 2e-052
gb|CO163373.1|CO163373 FLD1_41_E03.b1_A029 Root flooded Pin... 120 2e-052
gb|CO159878.1|CO159878 FLD1_16_D03.g1_A029 Root flooded Pin... 120 3e-052
gb|CO163440.1|CO163440 FLD1_41_E03.g1_A029 Root flooded Pin... 120 1e-051
gb|DR047978.1|DR047978 RTBOR1_5_G11.g2_A029 Roots plus adde... 131 3e-051
gb|CF385408.1|CF385408 RTDR1_3_F11.g1_A015 Loblolly pine ro... 129 2e-050
gb|DR022264.1|DR022264 STRS1_49_H09.g1_A034 Shoot tip pitch... 133 2e-050
gb|BQ702714.1|BQ702714 NXSI_131_G01_F NXSI (Nsf Xylem Side ... 131 2e-050
gb|DR168448.1|DR168448 RTPHOS1_25_B11.g1_A029 Roots minus p... 126 8e-050
gb|BQ698563.1|BQ698563 NXPV_071_D11_F NXPV (Nsf Xylem Plani... 115 2e-049
gb|CX713159.1|CX713159 RTPQ1_7_H02.b1_A032 Roots treated wi... 129 2e-049
gb|AW784073.1|AW784073 NXNV_117_D06_F Nsf Xylem Normal wood... 135 3e-049
gb|CX649080.1|CX649080 COLD1_32_G10.g1_A029 Root cold Pinus... 118 1e-048
gb|DR161686.1|DR161686 RTFE1_13_G04.b1_A029 Roots minus iro... 120 1e-048
gb|CF479200.1|CF479200 RTWW3_24_E03.g1_A022 Well-watered lo... 117 4e-048
gb|CV033549.1|CV033549 RTNACL1_35_E10.b1_A029 Roots plus ad... 132 4e-048
gb|DR054787.1|DR054787 RTCA1_19_C08.g1_A029 Roots minus cal... 120 2e-047
gb|AW888107.1|AW888107 NXNV_129_C06_F Nsf Xylem Normal wood... 130 1e-046
gb|BM158573.1|BM158573 NXLV_036_D03_F NXLV (Nsf Xylem Late ... 110 4e-046
gb|BQ702536.1|BQ702536 NXSI_129_G02_F NXSI (Nsf Xylem Side ... 120 6e-046
gb|CF476939.1|CF476939 RTWW3_4_H08.g1_A022 Well-watered lob... 113 1e-045
gb|BI202806.1|BI202806 NXPV_090_G04_F NXPV (Nsf Xylem Plani... 133 1e-045
gb|BI397620.1|BI397620 NXPV_102_C04_F NXPV (Nsf Xylem Plani... 123 2e-045
gb|BG040150.1|BG040150 NXSI_109_A03_F NXSI (Nsf Xylem Side ... 116 7e-045
gb|AL751341.1|AL751341 AL751341 RS Pinus pinaster cDNA clon... 122 2e-044
gb|BI398029.1|BI398029 NXPV_113_F03_F NXPV (Nsf Xylem Plani... 133 2e-044
gb|DR094467.1|DR094467 STRR1_14_F06.g1_A033 Stem Response R... 105 3e-044
gb|DR071212.1|DR071212 RTDK1_18_H06.b1_A029 Roots, dark Pin... 129 3e-044
gb|CO159292.1|CO159292 FLD1_12_E03.g1_A029 Root flooded Pin... 105 9e-044
gb|DR100949.1|DR100949 STRR1_69_B01.g1_A033 Stem Response R... 106 9e-044
gb|CO160722.1|CO160722 FLD1_23_D07.g1_A029 Root flooded Pin... 135 1e-043
gb|CX713244.1|CX713244 RTPQ1_7_H02.g1_A032 Roots treated wi... 129 3e-043
gb|CV033638.1|CV033638 RTNACL1_35_E10.g1_A029 Roots plus ad... 133 8e-043
gb|DR052632.1|DR052632 RTCA1_5_G10.g1_A029 Roots minus calc... 89 4e-041
gb|CO361507.1|CO361507 NDL2_5_F07.b1_A029 Needles control 2... 88 7e-041
gb|CV031472.1|CV031472 RTNACL1_1_F09.g1_A029 Roots plus add... 92 7e-041
gb|CX653275.1|CX653275 COLD1_64_C04.g1_A029 Root cold Pinus... 92 7e-041
gb|BG040027.1|BG040027 NXSI_105_E09_F NXSI (Nsf Xylem Side ... 116 9e-041
gb|CO363310.1|CO363310 RTK1_9_A05.b1_A029 Roots minus potas... 91 1e-040
gb|CF390506.1|CF390506 RTDR2_19_A11.g1_A021 Loblolly pine r... 87 1e-040
gb|DR071813.1|DR071813 RTDK1_22_F04.b1_A029 Roots, dark Pin... 87 1e-040
gb|CF390325.1|CF390325 RTDR2_18_G11.g1_A021 Loblolly pine r... 87 1e-040
gb|DR054716.1|DR054716 RTCA1_19_C08.b1_A029 Roots minus cal... 131 1e-040
gb|DR011165.1|DR011165 HEAT1_4_A11.b1_A029 Root at 37 C for... 131 1e-040
gb|DR116977.1|DR116977 RTMG1_4_A10.b1_A029 Roots minus magn... 95 1e-040
gb|CO366824.1|CO366824 RTK1_30_H01.b1_A029 Roots minus pota... 95 2e-040
gb|CO366901.1|CO366901 RTK1_30_H01.g1_A029 Roots minus pota... 94 2e-040
gb|DR050745.1|DR050745 RTBOR1_25_A03.g1_A029 Roots plus add... 94 6e-040
gb|DR181130.1|DR181130 RTMNUT1_37_B03.b2_A029 Roots minus m... 94 6e-040
gb|DR181206.1|DR181206 RTMNUT1_37_B03.g2_A029 Roots minus m... 94 6e-040
gb|DR166669.1|DR166669 RTPHOS1_13_E03.g1_A029 Roots minus p... 128 1e-039
gb|DR053226.1|DR053226 RTCA1_9_F09.g1_A029 Roots minus calc... 90 2e-039
gb|DR071929.1|DR071929 RTDK1_23_A10.b1_A029 Roots, dark Pin... 129 3e-039
gb|DR744528.1|DR744528 RTCU1_23_C05.b1_A029 Roots plus adde... 93 3e-039
gb|CO364848.1|CO364848 RTK1_22_D11.b1_A029 Roots minus pota... 92 3e-039
gb|CF477922.1|CF477922 RTWW3_13_F10.g1_A022 Well-watered lo... 85 6e-039
gb|DR071363.1|DR071363 RTDK1_19_H04.b1_A029 Roots, dark Pin... 131 1e-038
gb|DN462318.1|DN462318 EST958117 Sequencing ESTs from loblo... 88 2e-038
gb|DT627145.1|DT627145 EST1160221 Sequencing ESTs from lobl... 88 2e-038
gb|CF386760.1|CF386760 RTDR1_16_F06.g1_A015 Loblolly pine r... 87 4e-038
gb|BG275371.1|BG275371 NXSI_141_B03_F NXSI (Nsf Xylem Side ... 94 5e-038
gb|CF387769.1|CF387769 RTDR1_18_D06.b1_A015 Loblolly pine r... 129 1e-037
gb|CO361591.1|CO361591 NDL2_5_F07.g1_A029 Needles control 2... 88 1e-037
gb|DR119706.1|DR119706 RTMG1_25_A03.b1_A029 Roots minus mag... 131 2e-037
gb|DR021226.1|DR021226 STRS1_43_F02.b1_A034 Shoot tip pitch... 83 3e-037
gb|CO172621.1|CO172621 NDL1_30_G08.g1_A029 Needles control ... 83 3e-037
gb|DR102272.1|DR102272 STRR1_79_F09.g1_A033 Stem Response R... 120 6e-037
gb|BX680983.1|BX680983 BX680983 RS Pinus pinaster cDNA clon... 82 1e-036
gb|CV033398.1|CV033398 RTNACL1_34_F12.b1_A029 Roots plus ad... 79 5e-036
gb|CX653205.1|CX653205 COLD1_64_C04.b1_A029 Root cold Pinus... 92 5e-036
gb|AW758821.1|AW758821 NXNV_091_A04_F Nsf Xylem Normal wood... 126 1e-035
gb|CF389644.1|CF389644 RTDR2_8_D02.g1_A021 Loblolly pine ro... 129 1e-034
gb|BQ697133.1|BQ697133 NXPV_049_H08_F NXPV (Nsf Xylem Plani... 129 1e-034
gb|BE607133.1|BE607133 NXCI_037_B08_F NXCI (Nsf Xylem Compr... 95 6e-034
gb|DR011578.1|DR011578 HEAT1_6_C09.g1_A029 Root at 37 C for... 91 8e-034
gb|CR392582.1|CR392582 CR392582 RN Pinus pinaster cDNA clon... 126 1e-033
gb|BQ697129.1|BQ697129 NXPV_049_H07_F NXPV (Nsf Xylem Plani... 126 1e-033
gb|AA556385.1|AA556385 240 Loblolly pine C Pinus taeda cDNA... 127 2e-033
gb|DN461149.1|DN461149 EST956948 Sequencing ESTs from loblo... 77 2e-033
gb|DT627100.1|DT627100 EST1160176 Sequencing ESTs from lobl... 77 3e-033
gb|DR015053.1|DR015053 STRS1_1_E12.b1_A034 Shoot tip pitch ... 135 5e-033
gb|CO173766.1|CO173766 NDL1_39_D03.b1_A029 Needles control ... 92 7e-033
gb|CF475624.1|CF475624 RTWW2_11_D10.b1_A021 Well-watered lo... 92 7e-033
gb|BQ697577.1|BQ697577 NXPV_058_B11_F NXPV (Nsf Xylem Plani... 115 1e-032
gb|CF476781.1|CF476781 RTWW3_3_G09.g1_A022 Well-watered lob... 113 1e-032
dbj|BD236355.1| Materials and method for modification of pl... 113 1e-032
gb|DR019480.1|DR019480 STRS1_30_H01.b1_A034 Shoot tip pitch... 125 3e-032
gb|AW289642.1|AW289642 NXNV003F09F Nsf Xylem Normal wood Ve... 126 4e-032
gb|CD028222.1|CD028222 NXNV003F09 Nsf Xylem Normal wood Ver... 126 4e-032
gb|DR100865.1|DR100865 STRR1_68_G10.g1_A033 Stem Response R... 86 4e-032
gb|CX715415.1|CX715415 RTPQ1_34_B06.b1_A032 Roots treated w... 100 5e-032
gb|DR168377.1|DR168377 RTPHOS1_25_B11.b1_A029 Roots minus p... 117 9e-032
gb|BF778461.1|BF778461 NXSI_085_A09_F NXSI (Nsf Xylem Side ... 130 9e-032
gb|DR011498.1|DR011498 HEAT1_6_C09.b1_A029 Root at 37 C for... 91 1e-031
gb|CF476894.1|CF476894 RTWW3_4_H08.b1_A022 Well-watered lob... 129 1e-031
gb|DR088666.1|DR088666 RTAL1_3_D01.g1_A029 Roots plus added... 95 4e-031
gb|CO159211.1|CO159211 FLD1_12_E03.b1_A029 Root flooded Pin... 135 5e-031
gb|CO159712.1|CO159712 FLD1_15_G12.b1_A029 Root flooded Pin... 135 5e-031
gb|CO160664.1|CO160664 FLD1_23_D07.b1_A029 Root flooded Pin... 135 5e-031
gb|DR102830.1|DR102830 STRR1_84_G03.b1_A033 Stem Response R... 135 5e-031
gb|DR692253.1|DR692253 EST1082341 Normalized pine embryo li... 111 8e-031
gb|BG040183.1|BG040183 NXSI_109_D07_F NXSI (Nsf Xylem Side ... 125 8e-031
gb|DR023848.1|DR023848 STRS1_60_A08.g1_A034 Shoot tip pitch... 113 1e-030
gb|BE496488.1|BE496488 NXCI_018_F12_F NXCI (Nsf Xylem Compr... 123 2e-030
gb|BX254899.1|BX254899 BX254899 Pinus pinaster differenciat... 133 2e-030
gb|CF392461.1|CF392461 RTDR3_6_F04.b1_A022 Loblolly pine ro... 133 2e-030
gb|DR022572.1|DR022572 STRS1_52_A11.b1_A034 Shoot tip pitch... 133 2e-030
gb|DR047890.1|DR047890 RTBOR1_5_G11.b2_A029 Roots plus adde... 133 2e-030
dbj|BD236365.1| Materials and method for modification of pl... 133 2e-030
gb|CD028504.1|CD028504 NXSI_119_G04_F NXSI (Nsf Xylem Side ... 110 5e-030
gb|BX251811.1|BX251811 BX251811 Pinus pinaster differenciat... 131 6e-030
gb|DR161770.1|DR161770 RTFE1_13_G04.g1_A029 Roots minus iro... 131 6e-030
gb|DR112535.1|DR112535 RTS1_28_H08.g1_A029 Roots minus sulf... 104 7e-030
gb|DR094419.1|DR094419 STRR1_14_A12.g1_A033 Stem Response R... 106 7e-030
dbj|BD236359.1| Materials and method for modification of pl... 105 7e-030
gb|DR011550.1|DR011550 HEAT1_6_A04.g1_A029 Root at 37 C for... 83 2e-029
gb|BE123534.1|BE123534 NXNV_149_D04_F Nsf Xylem Normal wood... 93 2e-029
gb|BG833042.1|BG833042 NXPV_088_D02_F NXPV (Nsf Xylem Plani... 111 2e-029
gb|CF385640.1|CF385640 RTDR1_5_H03.b1_A015 Loblolly pine ro... 129 3e-029
gb|CF400271.1|CF400271 RTWW1_4_B10.b1_A015 Well-watered lob... 129 3e-029
gb|DR165508.1|DR165508 RTPHOS1_5_B11.g1_A029 Roots minus ph... 125 4e-029
gb|CF395471.1|CF395471 RTDS2_11_C04.g1_A021 Drought-stresse... 128 4e-029
gb|DR118773.1|DR118773 RTMG1_19_D01.b1_A029 Roots minus mag... 128 4e-029
gb|DR688321.1|DR688321 EST1078405 Normalized pine embryo li... 128 4e-029
gb|DR094346.1|DR094346 STRR1_14_A12.b1_A033 Stem Response R... 106 2e-028
dbj|BD236345.1| Materials and method for modification of pl... 123 2e-027
gb|BG040147.1|BG040147 NXSI_106_H11_F NXSI (Nsf Xylem Side ... 122 2e-027
gb|DR011153.1|DR011153 HEAT1_3_H05.g1_A029 Root at 37 C for... 95 3e-027
gb|BG040871.1|BG040871 NXSI_116_B07_F NXSI (Nsf Xylem Side ... 112 4e-027
gb|BQ107630.1|BQ107630 NXLV100_C12_F NXLV (Nsf Xylem Late w... 121 6e-027
gb|BE662318.1|BE662318 ST84/ST84E08 Pine TriplEx shoot tip ... 121 9e-027
gb|CF400929.1|CF400929 RTWW1_8_E02.g1_A015 Well-watered lob... 120 1e-026
gb|DR386802.1|DR386802 RTHG1_17_B11.g1_A029 Roots plus adde... 120 2e-026
gb|BE187435.1|BE187435 NXNV_98_B03_F Nsf Xylem Normal wood ... 119 2e-026
gb|BX249552.1|BX249552 BX249552 Pinus pinaster differenciat... 119 3e-026
gb|CX649006.1|CX649006 COLD1_32_G10.b1_A029 Root cold Pinus... 118 6e-026
gb|CF472834.1|CF472834 RTDS1_12_E06.b1_A015 Drought-stresse... 117 8e-026
gb|DR013381.1|DR013381 HEAT1_19_B05.b1_A029 Root at 37 C fo... 117 8e-026
gb|BI643781.1|BI643781 NXPV_134_F01_F NXPV (Nsf Xylem Plani... 116 3e-025
dbj|BD236374.1| Materials and method for modification of pl... 115 5e-025
gb|BF777997.1|BF777997 NXSI_079_G04_F NXSI (Nsf Xylem Side ... 113 1e-024
gb|CO196967.1|CO196967 GEO1_3_A08.b1_A029 Root gravitropism... 91 2e-024
gb|CF385659.1|CF385659 RTDR1_5_H03.g1_A015 Loblolly pine ro... 113 2e-024
dbj|BD236341.1| Materials and method for modification of pl... 111 7e-024
gb|CF401004.1|CF401004 RTWW1_9_B05.g1_A015 Well-watered lob... 79 1e-023
dbj|BD236340.1| Materials and method for modification of pl... 109 3e-023
gb|BQ697333.1|BQ697333 NXPV_055_H09_F NXPV (Nsf Xylem Plani... 108 5e-023
dbj|BD236383.1| Materials and method for modification of pl... 108 5e-023
gb|DR112466.1|DR112466 RTS1_28_H08.b1_A029 Roots minus sulf... 107 9e-023
dbj|BD236382.1| Materials and method for modification of pl... 106 2e-022
gb|CF386663.1|CF386663 RTDR1_16_F06.b1_A015 Loblolly pine r... 95 2e-022
gb|CF390377.1|CF390377 RTDR2_19_G03.b1_A021 Loblolly pine r... 95 2e-022
gb|CF390091.1|CF390091 RTDR2_12_E02.b1_A021 Loblolly pine r... 106 2e-022
gb|DR054305.1|DR054305 RTCA1_16_C01.g1_A029 Roots minus cal... 94 8e-022
dbj|BD236344.1| Materials and method for modification of pl... 104 8e-022
gb|CF670105.1|CF670105 RTCNT1_48_D05.b1_A029 Root control P... 68 1e-021
gb|CF670187.1|CF670187 RTCNT1_48_D05.g1_A029 Root control P... 68 1e-021
gb|BQ697469.1|BQ697469 NXPV_056_F08_F NXPV (Nsf Xylem Plani... 103 2e-021
gb|DR022641.1|DR022641 STRS1_52_A11.g1_A034 Shoot tip pitch... 103 2e-021
gb|CX646563.1|CX646563 COLD1_10_D03.b1_A029 Root cold Pinus... 63 3e-021
gb|CF394635.1|CF394635 RTDS2_6_B06.g1_A021 Drought-stressed... 91 3e-021
gb|DR101057.1|DR101057 STRR1_70_F05.b1_A033 Stem Response R... 88 5e-021
gb|DR017717.1|DR017717 STRS1_18_B11.b1_A034 Shoot tip pitch... 101 8e-021
>gb|DR017554.1|DR017554 STRS1_17_B10.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_17_B10_A034 3', mRNA sequence
Length = 854
Score = 135 bits (289), Expect(2) = 9e-064
Identities = 51/85 (60%), Positives = 61/85 (71%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C YQDTLY H+ RQF+R+C + GT+DFIFGN+ VVLQ+C + PRKP ANQ N IT
Sbjct: 113 YRCKIAAYQDTLYAHSLRQFYRECNIFGTVDFIFGNAAVVLQSCNLMPRKPGANQKNAIT 292
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D GT +HNC I PH D
Sbjct: 293 AQGRTDPNQNTGTSIHNCKITPHAD 367
Score = 129 bits (276), Expect(2) = 9e-064
Identities = 49/100 (49%), Positives = 64/100 (64%)
Frame = -2 / +2
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ I G I P GWLEW+G F L+TL+Y E N G G+ R K
Sbjct: 395 TYLGRPWKEYSRTVYMQSYIDGVIQPAGWLEWDGAFALKTLYYGEYMNTGPGSATGNRVK 574
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLL 282
W G + + + +FTV FIQG ++ GV +I GL+
Sbjct: 575 WPGYRVIKSSQEASKFTVGEFIQGNSWLQSTGVDYIDGLI 694
Score = 75.8 bits (159), Expect(2) = 5e-026
Identities = 37/78 (47%), Positives = 42/78 (53%)
Frame = +1 / -3
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPV 789
+S WG ++QL VP S PCAVM FA GF G Q C+TT P MKS VP
Sbjct: 369 RSAWGVILQLWMEVPVFWFGSVLPCAVMAFF*FAPGFLGIRLQLCNTTAAFPNMKSTVPK 190
Query: 790 TRQSRKNCRCACVYSVSW 843
S NCR C Y+VSW
Sbjct: 189 MLHSL*NCRRECAYNVSW 136
Score = 62.5 bits (130), Expect(2) = 5e-026
Identities = 34/82 (41%), Positives = 40/82 (48%)
Frame = +1 / -3
Query: 331 PWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSVSRPKSPFHSSQPLGS 510
P M TVN + + P H R ++ P P S * V + K+P HSSQP G
Sbjct: 645 PCMNSPTVNLLAS*ELLITRYPGHFTRFPVAEPGPVFIYSP*YKVFKAKAPSHSSQPAG* 466
Query: 511 MKPPMSFWM*IVREYSFQGRAR 576
M P M M* VREYSF G R
Sbjct: 465 MTPSMYDCM*TVREYSFHGLPR 400
>gb|DR080638.1|DR080638 RTFEPL1_24_D06.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_24_D06_A029 3', mRNA sequence
Length = 780
Score = 135 bits (289), Expect(2) = 9e-064
Identities = 51/85 (60%), Positives = 61/85 (71%)
Frame = -2 / +1
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C YQDTLY H+ RQF+R+C + GT+DFIFGN+ VVLQ+C + PRKP ANQ N IT
Sbjct: 40 YRCKIAAYQDTLYAHSLRQFYRECNIFGTVDFIFGNAAVVLQSCNLMPRKPGANQKNAIT 219
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D GT +HNC I PH D
Sbjct: 220 AQGRTDPNQNTGTSIHNCKITPHAD 294
Score = 129 bits (276), Expect(2) = 9e-064
Identities = 49/100 (49%), Positives = 64/100 (64%)
Frame = -2 / +1
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ I G I P GWLEW+G F L+TL+Y E N G G+ R K
Sbjct: 322 TYLGRPWKEYSRTVYMQSYIDGVIQPAGWLEWDGAFALKTLYYGEYMNTGPGSATGNRVK 501
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLL 282
W G + + + +FTV FIQG ++ GV +I GL+
Sbjct: 502 WPGYRVIKSSQEASKFTVGEFIQGNSWLQSTGVDYIDGLI 621
Score = 75.8 bits (159), Expect(2) = 5e-026
Identities = 37/78 (47%), Positives = 42/78 (53%)
Frame = +1 / -2
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPV 789
+S WG ++QL VP S PCAVM FA GF G Q C+TT P MKS VP
Sbjct: 296 RSAWGVILQLWMEVPVFWFGSVLPCAVMAFF*FAPGFLGIRLQLCNTTAAFPNMKSTVPK 117
Query: 790 TRQSRKNCRCACVYSVSW 843
S NCR C Y+VSW
Sbjct: 116 MLHSL*NCRRECAYNVSW 63
Score = 62.5 bits (130), Expect(2) = 5e-026
Identities = 34/82 (41%), Positives = 40/82 (48%)
Frame = +1 / -2
Query: 331 PWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSVSRPKSPFHSSQPLGS 510
P M TVN + + P H R ++ P P S * V + K+P HSSQP G
Sbjct: 572 PCMNSPTVNLLAS*ELLITRYPGHFTRFPVAEPGPVFIYSP*YKVFKAKAPSHSSQPAG* 393
Query: 511 MKPPMSFWM*IVREYSFQGRAR 576
M P M M* VREYSF G R
Sbjct: 392 MTPSMYDCM*TVREYSFHGLPR 327
>gb|DR060376.1|DR060376 RTNIT1_27_A07.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_27_A07_A029 5', mRNA sequence
Length = 801
Score = 133 bits (284), Expect(2) = 6e-063
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -2 / +3
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 411 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 590
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
W G + +T + +FTV FIQG ++ GV ++ GL
Sbjct: 591 WAGYRVITSSQEASKFTVGEFIQGDSWLQSTGVDYVDGL 707
Score = 128 bits (275), Expect(2) = 6e-063
Identities = 49/85 (57%), Positives = 59/85 (69%)
Frame = -2 / +3
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C YQDTLY H+ RQF+R+C + GT+DFIFGN+ VV Q+C + PRKP ANQ N IT
Sbjct: 129 YRCKIAAYQDTLYAHSLRQFYRECNILGTVDFIFGNAAVVFQSCTMIPRKPGANQKNAIT 308
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D GT +HNC I P D
Sbjct: 309 AQGRTDPNQNTGTSIHNCKITPDAD 383
Score = 58.3 bits (121), Expect(3) = 6e-021
Identities = 34/78 (43%), Positives = 40/78 (51%)
Frame = +1 / -3
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPV 789
+S G ++QL VP S PCAV+ FA GF G I Q +TT P MKS VP
Sbjct: 385 RSASGVILQL*MEVPVFWFGSVLPCAVIAFF*FAPGFLGIIVQL*NTTAAFPNMKSTVPK 206
Query: 790 TRQSRKNCRCACVYSVSW 843
S N R C Y+VSW
Sbjct: 205 MLHSL*NWRRECAYNVSW 152
Score = 51.9 bits (107), Expect(3) = 6e-021
Identities = 29/74 (39%), Positives = 33/74 (44%)
Frame = +1 / -3
Query: 286 NPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSV 465
NP TP + P M TVN + V P H RL ++AP P S * V
Sbjct: 706 NPST*STPVDCSHESPCMNSPTVNLLAS*ELVITRYPAHFTRLAVAAPGPVFMYSP*YKV 527
Query: 466 SRPKSPFHSSQPLG 507
K PFHSSQP G
Sbjct: 526 CNAKLPFHSSQPAG 485
Score = 28.1 bits (55), Expect(3) = 6e-021
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1 / -3
Query: 535 M*IVREYSFQGRARYV 582
M* VREYSF G RYV
Sbjct: 457 M*TVREYSFHGLPRYV 410
>gb|DR118854.1|DR118854 RTMG1_19_D01.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_19_D01_A029 5', mRNA sequence
Length = 778
Score = 133 bits (284), Expect(2) = 6e-063
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -2 / -2
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 390 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 211
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
W G + +T + +FTV FIQG ++ GV ++ GL
Sbjct: 210 WAGYRVITSSQEASKFTVGEFIQGDSWLQSTGVDYVDGL 94
Score = 128 bits (275), Expect(2) = 6e-063
Identities = 49/85 (57%), Positives = 59/85 (69%)
Frame = -2 / -2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C YQDTLY H+ RQF+R+C + GT+DFIFGN+ VV Q+C + PRKP ANQ N IT
Sbjct: 672 YRCKIAAYQDTLYAHSLRQFYRECNILGTVDFIFGNAAVVFQSCTMIPRKPGANQKNAIT 493
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D GT +HNC I P D
Sbjct: 492 AQGRTDPNQNTGTSIHNCKITPDAD 418
Score = 58.3 bits (121), Expect(3) = 6e-021
Identities = 34/78 (43%), Positives = 40/78 (51%)
Frame = +1 / +2
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPV 789
+S G ++QL VP S PCAV+ FA GF G I Q +TT P MKS VP
Sbjct: 416 RSASGVILQL*MEVPVFWFGSVLPCAVIAFF*FAPGFLGIIVQL*NTTAAFPNMKSTVPK 595
Query: 790 TRQSRKNCRCACVYSVSW 843
S N R C Y+VSW
Sbjct: 596 MLHSL*NWRRECAYNVSW 649
Score = 51.9 bits (107), Expect(3) = 6e-021
Identities = 29/74 (39%), Positives = 33/74 (44%)
Frame = +1 / +2
Query: 286 NPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSV 465
NP TP + P M TVN + V P H RL ++AP P S * V
Sbjct: 95 NPST*STPVDCSHESPCMNSPTVNLLAS*ELVITRYPAHFTRLAVAAPGPVFMYSP*YKV 274
Query: 466 SRPKSPFHSSQPLG 507
K PFHSSQP G
Sbjct: 275 CNAKLPFHSSQPAG 316
Score = 28.1 bits (55), Expect(3) = 6e-021
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1 / +2
Query: 535 M*IVREYSFQGRARYV 582
M* VREYSF G RYV
Sbjct: 344 M*TVREYSFHGLPRYV 391
>gb|CF666126.1|CF666126 RTCNT1_21_B03.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_21_B03_A029 3', mRNA sequence
Length = 767
Score = 133 bits (284), Expect(2) = 6e-063
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -2 / +3
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 351 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 530
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
W G + +T + +FTV FIQG ++ GV ++ GL
Sbjct: 531 WAGYRVITSSQEASKFTVGEFIQGDSWLQSTGVDYVDGL 647
Score = 128 bits (275), Expect(2) = 6e-063
Identities = 49/85 (57%), Positives = 59/85 (69%)
Frame = -2 / +3
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C YQDTLY H+ RQF+R+C + GT+DFIFGN+ VV Q+C + PRKP ANQ N IT
Sbjct: 69 YRCKIAAYQDTLYAHSLRQFYRECNILGTVDFIFGNAAVVFQSCTMIPRKPGANQKNAIT 248
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D GT +HNC I P D
Sbjct: 249 AQGRTDPNQNTGTSIHNCKITPDAD 323
Score = 58.3 bits (121), Expect(3) = 6e-021
Identities = 34/78 (43%), Positives = 40/78 (51%)
Frame = +1 / -2
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPV 789
+S G ++QL VP S PCAV+ FA GF G I Q +TT P MKS VP
Sbjct: 325 RSASGVILQL*MEVPVFWFGSVLPCAVIAFF*FAPGFLGIIVQL*NTTAAFPNMKSTVPK 146
Query: 790 TRQSRKNCRCACVYSVSW 843
S N R C Y+VSW
Sbjct: 145 MLHSL*NWRRECAYNVSW 92
Score = 51.9 bits (107), Expect(3) = 6e-021
Identities = 29/74 (39%), Positives = 33/74 (44%)
Frame = +1 / -2
Query: 286 NPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSV 465
NP TP + P M TVN + V P H RL ++AP P S * V
Sbjct: 646 NPST*STPVDCSHESPCMNSPTVNLLAS*ELVITRYPAHFTRLAVAAPGPVFMYSP*YKV 467
Query: 466 SRPKSPFHSSQPLG 507
K PFHSSQP G
Sbjct: 466 CNAKLPFHSSQPAG 425
Score = 28.1 bits (55), Expect(3) = 6e-021
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1 / -2
Query: 535 M*IVREYSFQGRARYV 582
M* VREYSF G RYV
Sbjct: 397 M*TVREYSFHGLPRYV 350
>gb|DR102684.1|DR102684 STRR1_83_B06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_83_B06_A033 3', mRNA sequence
Length = 736
Score = 133 bits (284), Expect(2) = 6e-063
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -2 / +3
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 345 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 524
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
W G + +T + +FTV FIQG ++ GV ++ GL
Sbjct: 525 WAGYRVITSSQEASKFTVGEFIQGDSWLQSTGVDYVDGL 641
Score = 128 bits (275), Expect(2) = 6e-063
Identities = 49/85 (57%), Positives = 59/85 (69%)
Frame = -2 / +3
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C YQDTLY H+ RQF+R+C + GT+DFIFGN+ VV Q+C + PRKP ANQ N IT
Sbjct: 63 YRCKIAAYQDTLYAHSLRQFYRECNILGTVDFIFGNAAVVFQSCTMIPRKPGANQKNAIT 242
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D GT +HNC I P D
Sbjct: 243 AQGRTDPNQNTGTSIHNCKITPDAD 317
Score = 58.3 bits (121), Expect(3) = 6e-021
Identities = 34/78 (43%), Positives = 40/78 (51%)
Frame = +1 / -1
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPV 789
+S G ++QL VP S PCAV+ FA GF G I Q +TT P MKS VP
Sbjct: 319 RSASGVILQL*MEVPVFWFGSVLPCAVIAFF*FAPGFLGIIVQL*NTTAAFPNMKSTVPK 140
Query: 790 TRQSRKNCRCACVYSVSW 843
S N R C Y+VSW
Sbjct: 139 MLHSL*NWRRECAYNVSW 86
Score = 51.9 bits (107), Expect(3) = 6e-021
Identities = 29/74 (39%), Positives = 33/74 (44%)
Frame = +1 / -1
Query: 286 NPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSV 465
NP TP + P M TVN + V P H RL ++AP P S * V
Sbjct: 640 NPST*STPVDCSHESPCMNSPTVNLLAS*ELVITRYPAHFTRLAVAAPGPVFMYSP*YKV 461
Query: 466 SRPKSPFHSSQPLG 507
K PFHSSQP G
Sbjct: 460 CNAKLPFHSSQPAG 419
Score = 28.1 bits (55), Expect(3) = 6e-021
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1 / -1
Query: 535 M*IVREYSFQGRARYV 582
M* VREYSF G RYV
Sbjct: 391 M*TVREYSFHGLPRYV 344
>gb|DR119446.1|DR119446 RTMG1_23_G05.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_23_G05_A029 3', mRNA sequence
Length = 724
Score = 133 bits (284), Expect(2) = 6e-063
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -2 / +2
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 335 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 514
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
W G + +T + +FTV FIQG ++ GV ++ GL
Sbjct: 515 WAGYRVITSSQEASKFTVGEFIQGDSWLQSTGVDYVDGL 631
Score = 128 bits (275), Expect(2) = 6e-063
Identities = 49/85 (57%), Positives = 59/85 (69%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C YQDTLY H+ RQF+R+C + GT+DFIFGN+ VV Q+C + PRKP ANQ N IT
Sbjct: 53 YRCKIAAYQDTLYAHSLRQFYRECNILGTVDFIFGNAAVVFQSCTMIPRKPGANQKNAIT 232
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D GT +HNC I P D
Sbjct: 233 AQGRTDPNQNTGTSIHNCKITPDAD 307
Score = 58.3 bits (121), Expect(3) = 6e-021
Identities = 34/78 (43%), Positives = 40/78 (51%)
Frame = +1 / -2
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPV 789
+S G ++QL VP S PCAV+ FA GF G I Q +TT P MKS VP
Sbjct: 309 RSASGVILQL*MEVPVFWFGSVLPCAVIAFF*FAPGFLGIIVQL*NTTAAFPNMKSTVPK 130
Query: 790 TRQSRKNCRCACVYSVSW 843
S N R C Y+VSW
Sbjct: 129 MLHSL*NWRRECAYNVSW 76
Score = 51.9 bits (107), Expect(3) = 6e-021
Identities = 29/74 (39%), Positives = 33/74 (44%)
Frame = +1 / -2
Query: 286 NPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSV 465
NP TP + P M TVN + V P H RL ++AP P S * V
Sbjct: 630 NPST*STPVDCSHESPCMNSPTVNLLAS*ELVITRYPAHFTRLAVAAPGPVFMYSP*YKV 451
Query: 466 SRPKSPFHSSQPLG 507
K PFHSSQP G
Sbjct: 450 CNAKLPFHSSQPAG 409
Score = 28.1 bits (55), Expect(3) = 6e-021
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1 / -2
Query: 535 M*IVREYSFQGRARYV 582
M* VREYSF G RYV
Sbjct: 381 M*TVREYSFHGLPRYV 334
>gb|CX653111.1|CX653111 COLD1_63_B01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_63_B01_A029 5', mRNA sequence
Length = 815
Score = 132 bits (283), Expect(2) = 3e-062
Identities = 48/99 (48%), Positives = 64/99 (64%)
Frame = -2 / +2
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 503 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 682
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
W G + +T + +FT+ FIQG ++ GV ++ GL
Sbjct: 683 WAGYRVITSSQEASKFTIGEFIQGDSWLQSTGVDYVDGL 799
Score = 127 bits (271), Expect(2) = 3e-062
Identities = 48/85 (56%), Positives = 59/85 (69%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C YQDTLY + RQF+R+C + GT+DFIFGN+ VV Q+C + PRKP ANQ N+IT
Sbjct: 221 YRCKIAAYQDTLYADSLRQFYRECNILGTVDFIFGNAAVVFQSCTMIPRKPGANQTNVIT 400
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D GT +HNC I P D
Sbjct: 401 AQGRTDPNQNTGTSIHNCKITPDAD 475
>gb|DR078427.1|DR078427 RTFEPL1_4_D03.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_4_D03_A029 3', mRNA sequence
Length = 701
Score = 133 bits (284), Expect(2) = 7e-062
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -2 / +3
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 279 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 458
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
W G + +T + +FTV FIQG ++ GV ++ GL
Sbjct: 459 WAGYRVITSSQEASKFTVGEFIQGDSWLQSTGVDYVDGL 575
Score = 125 bits (267), Expect(2) = 7e-062
Identities = 48/83 (57%), Positives = 57/83 (68%)
Frame = -2 / +3
Query: 860 CTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQ 681
C YQDTLY H+ RQF+R+C + GT+DFIFGN+ VV Q+C + PRKP ANQ N ITAQ
Sbjct: 3 CKIAAYQDTLYAHSLRQFYRECNILGTVDFIFGNAAVVFQSCTMIPRKPGANQKNAITAQ 182
Query: 680 GRRDKRSVGGTVLHNCTIEPHPD 612
GR D GT +HNC I P D
Sbjct: 183 GRTDPNQNTGTSIHNCKITPDAD 251
Score = 58.3 bits (121), Expect(3) = 6e-021
Identities = 34/78 (43%), Positives = 40/78 (51%)
Frame = +1 / -2
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPV 789
+S G ++QL VP S PCAV+ FA GF G I Q +TT P MKS VP
Sbjct: 253 RSASGVILQL*MEVPVFWFGSVLPCAVIAFF*FAPGFLGIIVQL*NTTAAFPNMKSTVPK 74
Query: 790 TRQSRKNCRCACVYSVSW 843
S N R C Y+VSW
Sbjct: 73 MLHSL*NWRRECAYNVSW 20
Score = 51.9 bits (107), Expect(3) = 6e-021
Identities = 29/74 (39%), Positives = 33/74 (44%)
Frame = +1 / -2
Query: 286 NPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSV 465
NP TP + P M TVN + V P H RL ++AP P S * V
Sbjct: 574 NPST*STPVDCSHESPCMNSPTVNLLAS*ELVITRYPAHFTRLAVAAPGPVFMYSP*YKV 395
Query: 466 SRPKSPFHSSQPLG 507
K PFHSSQP G
Sbjct: 394 CNAKLPFHSSQPAG 353
Score = 28.1 bits (55), Expect(3) = 6e-021
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1 / -2
Query: 535 M*IVREYSFQGRARYV 582
M* VREYSF G RYV
Sbjct: 325 M*TVREYSFHGLPRYV 278
>gb|DR166604.1|DR166604 RTPHOS1_13_E03.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_13_E03_A029 3', mRNA sequence
Length = 727
Score = 128 bits (275), Expect(2) = 2e-061
Identities = 49/85 (57%), Positives = 59/85 (69%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C YQDTLY H+ RQF+R+C + GT+DFIFGN+ VV Q+C + PRKP ANQ N IT
Sbjct: 29 YRCKIAAYQDTLYAHSLRQFYRECNILGTVDFIFGNAAVVFQSCTMIPRKPGANQKNAIT 208
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D GT +HNC I P D
Sbjct: 209 AQGRTDPNQNTGTSIHNCKITPDAD 283
Score = 127 bits (273), Expect(2) = 2e-061
Identities = 48/100 (48%), Positives = 64/100 (64%)
Frame = -2 / +2
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 311 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 490
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLL 282
G + +T + +FTV FIQG ++ GV ++ GL+
Sbjct: 491 LAGYRVITSSQEASKFTVGEFIQGDSWLQSTGVDYVDGLI 610
>gb|CO361821.1|CO361821 NDL2_7_G05.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_7_G05_A029 3', mRNA sequence
Length = 817
Score = 131 bits (281), Expect(2) = 4e-060
Identities = 47/97 (48%), Positives = 61/97 (62%)
Frame = -2 / +1
Query: 578 YLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKW 399
YL RPWKEYSRT+++Q+ +G I P GWLEWNG F L TL+Y E NRG GA + R KW
Sbjct: 352 YLGRPWKEYSRTVFMQSFLGDLIQPAGWLEWNGSFALSTLYYGEYMNRGPGAGTTNRVKW 531
Query: 398 GGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPG 288
G + + FTV FI+G ++P GV ++ G
Sbjct: 532 PGYRVINSSSEASSFTVSKFIEGDSWLPSTGVKYVSG 642
Score = 120 bits (257), Expect(2) = 4e-060
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = -2 / +1
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQF+R+C + GT+DFIFGNS VV Q+C + R+P+ NQ + T
Sbjct: 67 YRCSFKGYQDTLYAHSLRQFYRECNIYGTVDFIFGNSAVVFQDCNLLARRPLENQKILYT 246
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR+D G + NC + PD
Sbjct: 247 AQGRQDPNENTGISIQNCNVTAAPD 321
Score = 79.4 bits (167), Expect(2) = 1e-023
Identities = 40/92 (43%), Positives = 47/92 (51%)
Frame = +1 / -3
Query: 304 TPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSVSRPKSP 483
TP G + P M TVN + + P HL R ++ AP PR S * V R K P
Sbjct: 626 TPVEGNHESPSMNFETVNELASLELLITRYPGHLTRFVVPAPGPRFMYSP*YRVLRAKDP 447
Query: 484 FHSSQPLGSMKPPMSFWM*IVREYSFQGRARY 579
FHSSQP G ++ P M VREYSF G RY
Sbjct: 446 FHSSQPAG*IRSPRKDCMKTVREYSFHGLPRY 351
Score = 50.6 bits (104), Expect(2) = 1e-023
Identities = 34/84 (40%), Positives = 40/84 (47%)
Frame = +1 / -3
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPV 789
+SG +Q +P S P AV + F+ G R Q TT ELPKMKS VP
Sbjct: 323 RSGAAVTLQF*MEIPVFSLGSCLP*AV*RIF*FSRGLRASKLQS*KTTAELPKMKSTVP* 144
Query: 790 TRQSRKNCRCACVYSVSW*PSKVH 861
S N R Y VSW*P K+H
Sbjct: 143 MLHSL*N*RREWAYRVSW*PLKLH 72
>gb|CO361900.1|CO361900 NDL2_7_G05.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_7_G05_A029 5', mRNA sequence
Length = 812
Score = 131 bits (281), Expect(2) = 4e-060
Identities = 47/97 (48%), Positives = 61/97 (62%)
Frame = -2 / +1
Query: 578 YLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKW 399
YL RPWKEYSRT+++Q+ +G I P GWLEWNG F L TL+Y E NRG GA + R KW
Sbjct: 490 YLGRPWKEYSRTVFMQSFLGDLIQPAGWLEWNGSFALSTLYYGEYMNRGPGAGTTNRVKW 669
Query: 398 GGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPG 288
G + + FTV FI+G ++P GV ++ G
Sbjct: 670 PGYRVINSSSEASSFTVSKFIEGDSWLPSTGVKYVSG 780
Score = 120 bits (257), Expect(2) = 4e-060
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = -2 / +1
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQF+R+C + GT+DFIFGNS VV Q+C + R+P+ NQ + T
Sbjct: 205 YRCSFKGYQDTLYAHSLRQFYRECNIYGTVDFIFGNSAVVFQDCNLLARRPLENQKILYT 384
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR+D G + NC + PD
Sbjct: 385 AQGRQDPNENTGISIQNCNVTAAPD 459
Score = 79.4 bits (167), Expect(2) = 1e-023
Identities = 40/92 (43%), Positives = 47/92 (51%)
Frame = +1 / -1
Query: 304 TPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSVSRPKSP 483
TP G + P M TVN + + P HL R ++ AP PR S * V R K P
Sbjct: 764 TPVEGNHESPSMNFETVNELASLELLITRYPGHLTRFVVPAPGPRFMYSP*YRVLRAKDP 585
Query: 484 FHSSQPLGSMKPPMSFWM*IVREYSFQGRARY 579
FHSSQP G ++ P M VREYSF G RY
Sbjct: 584 FHSSQPAG*IRSPRKDCMKTVREYSFHGLPRY 489
Score = 50.6 bits (104), Expect(2) = 1e-023
Identities = 34/84 (40%), Positives = 40/84 (47%)
Frame = +1 / -1
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPV 789
+SG +Q +P S P AV + F+ G R Q TT ELPKMKS VP
Sbjct: 461 RSGAAVTLQF*MEIPVFSLGSCLP*AV*RIF*FSRGLRASKLQS*KTTAELPKMKSTVP* 282
Query: 790 TRQSRKNCRCACVYSVSW*PSKVH 861
S N R Y VSW*P K+H
Sbjct: 281 MLHSL*N*RREWAYRVSW*PLKLH 210
>gb|DR011239.1|DR011239 HEAT1_4_A11.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_4_A11_A029 5', mRNA sequence
Length = 747
Score = 131 bits (281), Expect(2) = 6e-060
Identities = 47/97 (48%), Positives = 61/97 (62%)
Frame = -2 / +2
Query: 578 YLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKW 399
YL RPWKEYSRT+++Q+ +G I P GWLEWNG F L TL+Y E NRG GA + R KW
Sbjct: 329 YLGRPWKEYSRTVFMQSFLGDLIQPAGWLEWNGSFALSTLYYGEYMNRGPGAGTTNRVKW 508
Query: 398 GGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPG 288
G + + FTV FI+G ++P GV ++ G
Sbjct: 509 PGYRVINSSSEASSFTVSKFIEGDSWLPSTGVKYVSG 619
Score = 120 bits (256), Expect(2) = 6e-060
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQF+R+C + GT+DFIFGNS VV Q+C + R+P+ NQ + T
Sbjct: 44 YRCSFKGYQDTLYAHSFRQFYRECNIYGTVDFIFGNSAVVFQDCNLLARRPLENQKILYT 223
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR+D G + NC + PD
Sbjct: 224 AQGRQDPNENTGISIQNCNVTAAPD 298
Score = 79.4 bits (167), Expect(2) = 1e-023
Identities = 40/92 (43%), Positives = 47/92 (51%)
Frame = +1 / -1
Query: 304 TPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSVSRPKSP 483
TP G + P M TVN + + P HL R ++ AP PR S * V R K P
Sbjct: 603 TPVEGNHESPSMNFETVNELASLELLITRYPGHLTRFVVPAPGPRFMYSP*YRVLRAKDP 424
Query: 484 FHSSQPLGSMKPPMSFWM*IVREYSFQGRARY 579
FHSSQP G ++ P M VREYSF G RY
Sbjct: 423 FHSSQPAG*IRSPRKDCMKTVREYSFHGLPRY 328
Score = 50.6 bits (104), Expect(2) = 1e-023
Identities = 34/84 (40%), Positives = 40/84 (47%)
Frame = +1 / -1
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPV 789
+SG +Q +P S P AV + F+ G R Q TT ELPKMKS VP
Sbjct: 300 RSGAAVTLQF*MEIPVFSLGSCLP*AV*RIF*FSRGLRASKLQS*KTTAELPKMKSTVP* 121
Query: 790 TRQSRKNCRCACVYSVSW*PSKVH 861
S N R Y VSW*P K+H
Sbjct: 120 MLHSL*N*RKEWAYRVSW*PLKLH 49
>gb|DR022117.1|DR022117 STRS1_49_A09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_49_A09_A034 3', mRNA sequence
Length = 827
Score = 130 bits (279), Expect(2) = 8e-060
Identities = 47/97 (48%), Positives = 61/97 (62%)
Frame = -2 / +3
Query: 578 YLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKW 399
YL RPWKEYSRT+++Q+ +G I P GWLEWNG F L TL+Y E NRG GA + R KW
Sbjct: 288 YLGRPWKEYSRTVFMQSFLGDLIQPAGWLEWNGSFALSTLYYGEYMNRGPGAGTTNRVKW 467
Query: 398 GGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPG 288
G + + FTV FI+G ++P GV ++ G
Sbjct: 468 PGYRVINSSSEASSFTVSKFIEGDLWLPSTGVKYVSG 578
Score = 120 bits (257), Expect(2) = 8e-060
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = -2 / +3
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQF+R+C + GT+DFIFGNS VV Q+C + R+P+ NQ + T
Sbjct: 3 YRCSFKGYQDTLYAHSLRQFYRECNIYGTVDFIFGNSAVVFQDCNLLARRPLENQKILYT 182
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR+D G + NC + PD
Sbjct: 183 AQGRQDPNENTGISIQNCNVTAAPD 257
Score = 79.9 bits (168), Expect(2) = 1e-023
Identities = 40/92 (43%), Positives = 47/92 (51%)
Frame = +1 / -2
Query: 304 TPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSVSRPKSP 483
TP G + P M TVN + + P HL R ++ AP PR S * V R K P
Sbjct: 562 TPVEGNHKSPSMNFETVNELASLELLITRYPGHLTRFVVPAPGPRFMYSP*YRVLRAKDP 383
Query: 484 FHSSQPLGSMKPPMSFWM*IVREYSFQGRARY 579
FHSSQP G ++ P M VREYSF G RY
Sbjct: 382 FHSSQPAG*IRSPRKDCMKTVREYSFHGLPRY 287
Score = 50.6 bits (104), Expect(2) = 1e-023
Identities = 34/84 (40%), Positives = 40/84 (47%)
Frame = +1 / -2
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPV 789
+SG +Q +P S P AV + F+ G R Q TT ELPKMKS VP
Sbjct: 259 RSGAAVTLQF*MEIPVFSLGSCLP*AV*RIF*FSRGLRASKLQS*KTTAELPKMKSTVP* 80
Query: 790 TRQSRKNCRCACVYSVSW*PSKVH 861
S N R Y VSW*P K+H
Sbjct: 79 MLHSL*N*RREWAYRVSW*PLKLH 8
>gb|DR015139.1|DR015139 STRS1_1_E12.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_1_E12_A034 5', mRNA sequence
Length = 893
Score = 135 bits (289), Expect(2) = 5e-059
Identities = 52/103 (50%), Positives = 66/103 (64%)
Frame = -2 / +2
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMS 414
G I+TYL RPWK+YSRT+++Q+ + IDP GWLEW+G+F L+TL+Y E N G GA S
Sbjct: 404 GSIKTYLGRPWKQYSRTVFMQSALDDLIDPAGWLEWDGNFALQTLYYGEYLNTGAGAGTS 583
Query: 413 KRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
KR W G +T +FTV FI G +IP GV F GL
Sbjct: 584 KRVSWPGFHVITSATEAAQFTVGQFISGNSWIPATGVGFTSGL 712
Score = 113 bits (241), Expect(2) = 5e-059
Identities = 44/91 (48%), Positives = 59/91 (64%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+ GYQDTLY ++ RQF+R+ + GT+DFIFGN+ VV+QN I R+PM+ Q N IT
Sbjct: 134 YRCSIKGYQDTLYVYSLRQFYREVDIYGTVDFIFGNAAVVIQNSNILARRPMSQQQNTIT 313
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFKEEAG 594
AQGR D G +HNC + D + G
Sbjct: 314 AQGRTDPNQNTGISIHNCKVSADSDLQAVEG 406
Score = 73.9 bits (155), Expect(2) = 9e-023
Identities = 43/103 (41%), Positives = 53/103 (51%)
Frame = +1 / -3
Query: 286 NPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSV 465
NP + TP G++ P M TVN + + V P L R + AP+P S * +V
Sbjct: 711 NPDVKPTPVAGIHELPEMN*PTVNWAASVALVIT*NPGQLTRFDVPAPAPVFKYSP*YNV 532
Query: 466 SRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVRIFP 594
R K P HSSQP GS+K + M VREY F G RYV I P
Sbjct: 531 *RAKFPSHSSQPAGSIKSSRADCMKTVREYCFHGLPRYVLIDP 403
Score = 53.3 bits (110), Expect(2) = 9e-023
Identities = 31/88 (35%), Positives = 44/88 (50%)
Frame = +1 / -3
Query: 586 IFPPASSLKSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELP 765
+ P+++ +S +QL +P S P AV++ + MG + FC TT LP
Sbjct: 414 LIDPSTACRSESALTLQLWMEIPVF*LGSVLP*AVIVFCCWLMGLLAKMLLFCITTAALP 235
Query: 766 KMKSMVPVTRQSRKNCRCACVYSVSW*P 849
K+KS VP SR N R Y+VSW P
Sbjct: 234 KIKSTVPYISTSR*NWRRE*TYNVSWYP 151
>gb|DR013467.1|DR013467 HEAT1_19_B05.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_19_B05_A029 5', mRNA sequence
Length = 741
Score = 127 bits (271), Expect(2) = 7e-058
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = -2 / +3
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQF+RDC V GTIDFIFGN+ VVLQNC + R+P+ANQ I T
Sbjct: 135 YRCSFKGYQDTLYVHSLRQFYRDCDVYGTIDFIFGNAAVVLQNCNLLARRPLANQQIIYT 314
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR+D G + NCT+ D
Sbjct: 315 AQGRQDPNENTGISIQNCTVTAASD 389
Score = 117 bits (251), Expect(2) = 7e-058
Identities = 41/94 (43%), Positives = 59/94 (62%)
Frame = -2 / +3
Query: 578 YLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKW 399
YL RPW+ YSRT+++++ + I P GWLEWNG F L TL+Y E N G GA + R +W
Sbjct: 420 YLGRPWRNYSRTVFMKSYLDDLIQPAGWLEWNGSFALSTLYYGEYMNSGPGAGTANRVRW 599
Query: 398 GGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPF 297
G + + + K+FTV FI+G ++P GV +
Sbjct: 600 AGYQVIKKSKEAKKFTVSQFIEGNSWLPSTGVRY 701
Score = 73.0 bits (153), Expect(2) = 4e-024
Identities = 38/77 (49%), Positives = 42/77 (54%)
Frame = +1 / -3
Query: 631 VQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVTRQSRKN 810
VQ +P S PCAV ++ WFA G R QFC TT LPKMKSMVP T QS N
Sbjct: 370 VQF*IEIPVFSLGSCLPCAV*IICWFARGLRARRLQFCRTTAALPKMKSMVP*TSQSL*N 191
Query: 811 CRCACVYSVSW*PSKVH 861
R VSW P K+H
Sbjct: 190 WRSE*T*RVSWYPLKLH 140
Score = 58.8 bits (122), Expect(2) = 4e-024
Identities = 36/92 (39%), Positives = 43/92 (46%)
Frame = +1 / -3
Query: 304 TPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSVSRPKSP 483
TP G + P M TVN + + P HL RL + AP P S * V R K P
Sbjct: 694 TPVEGNHELPSMN*DTVNFLASLDFLIT*YPAHLTRLAVPAPGPLFMYSP*YRVLRAKLP 515
Query: 484 FHSSQPLGSMKPPMSFWM*IVREYSFQGRARY 579
FHS+QP G +K +M VRE G RY
Sbjct: 514 FHSNQPAG*IKSSR*DFMNTVRE*FLHGLPRY 419
>gb|DR023771.1|DR023771 STRS1_60_A08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_60_A08_A034 3', mRNA sequence
Length = 808
Score = 129 bits (276), Expect(2) = 3e-057
Identities = 51/104 (49%), Positives = 64/104 (61%)
Frame = -2 / +2
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMS 414
G R YL RPWK YSRT+Y+Q + IDP GWLEW GDF L+TLFY E N G GA ++
Sbjct: 299 GLYRAYLGRPWKLYSRTVYLQTFLDDIIDPAGWLEWFGDFALDTLFYGEYMNSGPGAGLA 478
Query: 413 KRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLL 282
+R W G + + FTV FI G +++P G+ FI GLL
Sbjct: 479 RRVTWPGYRIFKAAQEVYPFTVAQFISGAKWLPSTGIVFIGGLL 610
Score = 113 bits (241), Expect(2) = 3e-057
Identities = 43/91 (47%), Positives = 58/91 (63%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+ GYQDTLY H+ RQF+R+C + GT+DFIFGN+ VVLQ C + RKP+ N +T
Sbjct: 29 YRCSVIGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVLQKCTMFARKPLPNSKITVT 208
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFKEEAG 594
AQGR+D G +H+C + D G
Sbjct: 209 AQGRKDPNQNTGISIHDCRVTAAADLAPVKG 301
Score = 67.5 bits (141), Expect(2) = 6e-022
Identities = 38/101 (37%), Positives = 50/101 (49%)
Frame = +1 / -2
Query: 283 SNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KS 462
S+P + P G + P M +TVN + + + +L P H+ RL AP P S *
Sbjct: 609 SSPPIKTIPVDGNHLAPEMNWATVNG*TSCAALKIL*PGHVTRLASPAPGPLFIYSP*NK 430
Query: 463 VSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVR 585
VS KSP HS+ P GS+ VREY+FQG R R
Sbjct: 429 VSSAKSPNHSNHPAGSIISSKKVCRYTVREYNFQGLPR*AR 307
Score = 57.0 bits (118), Expect(2) = 6e-022
Identities = 28/57 (49%), Positives = 32/57 (56%)
Frame = +1 / -2
Query: 679 PCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVTRQSRKNCRCACVYSVSW*P 849
P AV ++ GF + FC+TT LPKMKS VP S N R C YSVSW*P
Sbjct: 216 P*AVTVILELGRGFLANMVHFCNTTAALPKMKSTVP*MSHSL*NWRRECTYSVSW*P 46
>gb|DR102882.1|DR102882 STRR1_84_G03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_84_G03_A033 5', mRNA sequence
Length = 771
Score = 129 bits (277), Expect(2) = 3e-057
Identities = 49/97 (50%), Positives = 63/97 (64%)
Frame = -2 / +2
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMS 414
G I+TYL RPWK+YSRT+++Q+ + IDP GWLEW+G+F L+TL+Y E N G GA S
Sbjct: 476 GSIKTYLGRPWKQYSRTVFMQSALDDLIDPAGWLEWDGNFALQTLYYGEYLNTGAGAGTS 655
Query: 413 KRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGV 303
KR W G +T +FTV FI G +IP GV
Sbjct: 656 KRVSWPGFHVITSATEAAQFTVGQFISGNSWIPATGV 766
Score = 112 bits (240), Expect(2) = 3e-057
Identities = 44/91 (48%), Positives = 59/91 (64%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+ GYQDTLY ++ RQF+R+ + GT+DFIFGN+ VV+QN I R+PM+ Q N IT
Sbjct: 206 YRCSIKGYQDTLYVYSLRQFYREVDIYGTVDFIFGNAAVVIQNSNILARRPMSQQQNTIT 385
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFKEEAG 594
AQGR D G +HNC + D + G
Sbjct: 386 AQGRTDPNQNTGISIHNCKVSAASDLQAVEG 478
Score = 68.9 bits (144), Expect(2) = 3e-021
Identities = 41/97 (42%), Positives = 50/97 (51%)
Frame = +1 / -1
Query: 304 TPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSVSRPKSP 483
TP G++ P M TVN + + V P L R + AP+P S * +V R K P
Sbjct: 765 TPVAGIHELPEMN*PTVNWAASVALVIT*NPGQLTRFDVPAPAPVFKYSP*YNV*RAKFP 586
Query: 484 FHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVRIFP 594
HSSQP GS+K + M VREY F G RYV I P
Sbjct: 585 SHSSQPAGSIKSSRADCMKTVREYCFHGLPRYVLIDP 475
Score = 53.3 bits (110), Expect(2) = 3e-021
Identities = 31/88 (35%), Positives = 44/88 (50%)
Frame = +1 / -1
Query: 586 IFPPASSLKSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELP 765
+ P+++ +S +QL +P S P AV++ + MG + FC TT LP
Sbjct: 486 LIDPSTACRSEAALTLQLWMEIPVF*LGSVLP*AVIVFCCWLMGLLAKMLLFCITTAALP 307
Query: 766 KMKSMVPVTRQSRKNCRCACVYSVSW*P 849
K+KS VP SR N R Y+VSW P
Sbjct: 306 KIKSTVPYISTSR*NWRRE*TYNVSWYP 223
>gb|CF389533.1|CF389533 RTDR2_8_D02.b1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_8_D02_A021 3', mRNA
sequence
Length = 648
Score = 129 bits (276), Expect(2) = 3e-057
Identities = 51/104 (49%), Positives = 64/104 (61%)
Frame = -2 / -2
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMS 414
G R YL RPWK YSRT+Y+Q + IDP GWLEW GDF L+TLFY E N G GA ++
Sbjct: 332 GLYRAYLGRPWKLYSRTVYLQTFLDDIIDPAGWLEWFGDFALDTLFYGEYMNSGPGAGLA 153
Query: 413 KRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLL 282
+R W G + + FTV FI G +++P G+ FI GLL
Sbjct: 152 RRVTWPGYRIFKAAQEVYPFTVAQFISGAKWLPSTGIVFIGGLL 21
Score = 113 bits (241), Expect(2) = 3e-057
Identities = 43/91 (47%), Positives = 58/91 (63%)
Frame = -2 / -2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+ GYQDTLY H+ RQF+R+C + GT+DFIFGN+ VVLQ C + RKP+ N +T
Sbjct: 602 YRCSVIGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVLQKCTMFARKPLPNSKITVT 423
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFKEEAG 594
AQGR+D G +H+C + D G
Sbjct: 422 AQGRKDPNQNTGISIHDCRVTAAADLAPVKG 330
Score = 67.5 bits (141), Expect(2) = 6e-022
Identities = 38/101 (37%), Positives = 50/101 (49%)
Frame = +1 / +1
Query: 283 SNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KS 462
S+P + P G + P M +TVN + + + +L P H+ RL AP P S *
Sbjct: 22 SSPPIKTIPVDGNHLAPEMNWATVNG*TSCAALKIL*PGHVTRLASPAPGPLFIYSP*NK 201
Query: 463 VSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVR 585
VS KSP HS+ P GS+ VREY+FQG R R
Sbjct: 202 VSSAKSPNHSNHPAGSIISSKKVCRYTVREYNFQGLPR*AR 324
Score = 57.0 bits (118), Expect(2) = 6e-022
Identities = 28/57 (49%), Positives = 32/57 (56%)
Frame = +1 / +1
Query: 679 PCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVTRQSRKNCRCACVYSVSW*P 849
P AV ++ GF + FC+TT LPKMKS VP S N R C YSVSW*P
Sbjct: 415 P*AVTVILELGRGFLANMVHFCNTTAALPKMKSTVP*MSHSL*NWRRECTYSVSW*P 585
>gb|DR070485.1|DR070485 RTDK1_13_D04.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_13_D04_A029 5', mRNA sequence
Length = 854
Score = 127 bits (271), Expect(2) = 5e-057
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQF+RDC V GTIDFIFGN+ VVLQNC + R+P+ANQ I T
Sbjct: 44 YRCSFKGYQDTLYVHSLRQFYRDCDVYGTIDFIFGNAAVVLQNCNLLARRPLANQQIIYT 223
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR+D G + NCT+ D
Sbjct: 224 AQGRQDPNENTGISIQNCTVTAASD 298
Score = 115 bits (245), Expect(2) = 5e-057
Identities = 40/94 (42%), Positives = 58/94 (61%)
Frame = -2 / +2
Query: 578 YLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKW 399
YL RPW+ YSR +++++ + I P GWLEWNG F L TL+Y E N G GA + R +W
Sbjct: 329 YLGRPWRNYSRIVFMKSYLDDLIQPAGWLEWNGSFALSTLYYGEYMNSGPGAGTANRVRW 508
Query: 398 GGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPF 297
G + + + K+FTV FI+G ++P GV +
Sbjct: 509 AGYQVIKKSKEAKKFTVSQFIEGNSWLPSTGVRY 610
Score = 73.0 bits (153), Expect(2) = 1e-023
Identities = 38/77 (49%), Positives = 42/77 (54%)
Frame = +1 / -3
Query: 631 VQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVTRQSRKN 810
VQ +P S PCAV ++ WFA G R QFC TT LPKMKSMVP T QS N
Sbjct: 279 VQF*IEIPVFSLGSCLPCAV*IICWFARGLRARRLQFCRTTAALPKMKSMVP*TSQSL*N 100
Query: 811 CRCACVYSVSW*PSKVH 861
R VSW P K+H
Sbjct: 99 WRSE*T*RVSWYPLKLH 49
Score = 57.4 bits (119), Expect(2) = 1e-023
Identities = 35/92 (38%), Positives = 43/92 (46%)
Frame = +1 / -3
Query: 304 TPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSVSRPKSP 483
TP G + P M TVN + + P HL RL + AP P S * V R K P
Sbjct: 603 TPVEGNHELPSMN*DTVNFLASLDFLIT*YPAHLTRLAVPAPGPLFMYSP*YRVLRAKLP 424
Query: 484 FHSSQPLGSMKPPMSFWM*IVREYSFQGRARY 579
FHS+QP G +K +M +RE G RY
Sbjct: 423 FHSNQPAG*IKSSR*DFMNTMRE*FLHGLPRY 328
>gb|DR119772.1|DR119772 RTMG1_25_A03.g2_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_25_A03_A029 5', mRNA sequence
Length = 724
Score = 120 bits (257), Expect(2) = 2e-056
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQF+R+C + GT+DFIFGNS VV Q+C + R+P+ NQ + T
Sbjct: 182 YRCSFKGYQDTLYAHSLRQFYRECNIYGTVDFIFGNSAVVFQDCNLLARRPLENQKILYT 361
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR+D G + NC + PD
Sbjct: 362 AQGRQDPNENTGISIQNCNVTAAPD 436
Score = 119 bits (254), Expect(2) = 2e-056
Identities = 43/86 (50%), Positives = 54/86 (62%)
Frame = -2 / +2
Query: 578 YLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKW 399
YL RPWKEYSRT+++Q+ +G I P GWLEWNG F L TL+Y E NRG GA + R KW
Sbjct: 467 YLGRPWKEYSRTVFMQSFLGDLIQPAGWLEWNGSFALSTLYYGEYMNRGPGAGTTNRVKW 646
Query: 398 GGIKTVTYEEAQKEFTVETFIQGQQF 321
G + + FTV FI+G +
Sbjct: 647 PGYRVINSSSEASSFTVSKFIEGDSW 724
Score = 76.7 bits (161), Expect(2) = 9e-023
Identities = 37/83 (44%), Positives = 43/83 (51%)
Frame = +1 / -2
Query: 331 PWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSVSRPKSPFHSSQPLGS 510
P M TVN + + P HL R ++ AP PR S * V R K PFHSSQP G
Sbjct: 714 PSMNFETVNELASLELLITRYPGHLTRFVVPAPGPRFMYSP*YRVLRAKDPFHSSQPAG* 535
Query: 511 MKPPMSFWM*IVREYSFQGRARY 579
++ P M VREYSF G RY
Sbjct: 534 IRSPRKDCMKTVREYSFHGLPRY 466
Score = 50.6 bits (104), Expect(2) = 9e-023
Identities = 34/84 (40%), Positives = 40/84 (47%)
Frame = +1 / -2
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPV 789
+SG +Q +P S P AV + F+ G R Q TT ELPKMKS VP
Sbjct: 438 RSGAAVTLQF*MEIPVFSLGSCLP*AV*RIF*FSRGLRASKLQS*KTTAELPKMKSTVP* 259
Query: 790 TRQSRKNCRCACVYSVSW*PSKVH 861
S N R Y VSW*P K+H
Sbjct: 258 MLHSL*N*RREWAYRVSW*PLKLH 187
>gb|DR019776.1|DR019776 STRS1_32_H01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_32_H01_A034 3', mRNA sequence
Length = 832
Score = 132 bits (283), Expect(2) = 6e-056
Identities = 51/103 (49%), Positives = 65/103 (63%)
Frame = -2 / +3
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMS 414
G I+TYL RPWK+YSRT+++Q+ + IDP GWLEW+G+F L+TL+Y E N G GA S
Sbjct: 297 GSIKTYLGRPWKQYSRTVFMQSALDDLIDPAGWLEWDGNFALQTLYYGEYMNTGVGAVTS 476
Query: 413 KRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
KR W G +T FTV F+ G +IP GV F GL
Sbjct: 477 KRVSWPGFHIITSATEAARFTVGQFLSGNSWIPATGVAFTSGL 605
Score = 105 bits (225), Expect(2) = 6e-056
Identities = 42/85 (49%), Positives = 55/85 (64%)
Frame = -2 / +3
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+ GYQDTLY ++ RQF+R+ + GT+DFIFGN+ VV+QN I R+PM Q N IT
Sbjct: 27 YRCSIKGYQDTLYVYSLRQFYREVDIYGTVDFIFGNAAVVIQNSNIFARRPMNQQQNTIT 206
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D G + NC + D
Sbjct: 207 AQGRTDPNQNTGISIQNCKVSAASD 281
>gb|DR022182.1|DR022182 STRS1_49_H09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_49_H09_A034 3', mRNA sequence
Length = 649
Score = 133 bits (284), Expect(2) = 2e-055
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -2 / +3
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 237 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 416
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
W G + +T + +FTV FIQG ++ GV ++ GL
Sbjct: 417 WAGYRVITSSQEASKFTVGEFIQGDSWLQSTGVDYVDGL 533
Score = 103 bits (220), Expect(2) = 2e-055
Identities = 40/68 (58%), Positives = 48/68 (70%)
Frame = -2 / +3
Query: 815 RQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHN 636
RQF+R+C + GT+DFIFGN+ VV Q+C + PRKP ANQ N ITAQGR D GT +HN
Sbjct: 6 RQFYRECNILGTVDFIFGNAAVVFQSCTMIPRKPGANQKNAITAQGRTDPNQNTGTSIHN 185
Query: 635 CTIEPHPD 612
C I P D
Sbjct: 186 CKITPDAD 209
>gb|DR097887.1|DR097887 STRR1_37_E09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_37_E09_A033 5', mRNA sequence
Length = 612
Score = 133 bits (284), Expect(2) = 2e-055
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -2 / -1
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 381 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 202
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
W G + +T + +FTV FIQG ++ GV ++ GL
Sbjct: 201 WAGYRVITSSQEASKFTVGEFIQGDSWLQSTGVDYVDGL 85
Score = 103 bits (220), Expect(2) = 2e-055
Identities = 40/68 (58%), Positives = 48/68 (70%)
Frame = -2 / -1
Query: 815 RQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHN 636
RQF+R+C + GT+DFIFGN+ VV Q+C + PRKP ANQ N ITAQGR D GT +HN
Sbjct: 612 RQFYRECNILGTVDFIFGNAAVVFQSCTMIPRKPGANQKNAITAQGRTDPNQNTGTSIHN 433
Query: 635 CTIEPHPD 612
C I P D
Sbjct: 432 CKITPDAD 409
>gb|CX653033.1|CX653033 COLD1_63_B01.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_63_B01_A029 3', mRNA sequence
Length = 786
Score = 132 bits (283), Expect(2) = 3e-055
Identities = 48/99 (48%), Positives = 64/99 (64%)
Frame = -2 / +3
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 231 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 410
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
W G + +T + +FT+ FIQG ++ GV ++ GL
Sbjct: 411 WAGYRVITSSQEASKFTIGEFIQGDSWLQSTGVDYVDGL 527
Score = 103 bits (220), Expect(2) = 3e-055
Identities = 39/67 (58%), Positives = 48/67 (71%)
Frame = -2 / +3
Query: 812 QFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNC 633
QF+R+C + GT+DFIFGN+ VV Q+C + PRKP ANQ N+ITAQGR D GT +HNC
Sbjct: 3 QFYRECNILGTVDFIFGNAAVVFQSCTMIPRKPGANQTNVITAQGRTDPNQNTGTSIHNC 182
Query: 632 TIEPHPD 612
I P D
Sbjct: 183 KITPDAD 203
>gb|BG318166.1|BG318166 NXPV_011_B08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_011_B08 5' similar to Arabidopsis
thaliana sequence At1g02805 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 569
Score = 133 bits (286), Expect(2) = 5e-055
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C YQDTLY H+ RQF+R+C + GT+DFIFGN+ VVLQ+C + PRKP ANQ N IT
Sbjct: 41 YRCKIAAYQDTLYAHSLRQFYRECNILGTVDFIFGNAAVVLQSCNLMPRKPGANQKNAIT 220
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D G+ +HNC I PH D
Sbjct: 221 AQGRTDPNQNTGSSIHNCKITPHAD 295
Score = 101 bits (215), Expect(2) = 5e-055
Identities = 39/82 (47%), Positives = 48/82 (58%)
Frame = -2 / +2
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ I G I P GWLEW+G F L+TL+Y E N G + R K
Sbjct: 323 TYLGRPWKEYSRTVYMQSYIDGVIQPAGWLEWDGAFALKTLYYGEYMNTGXXSATGNRVK 502
Query: 401 WGGIKTVTYEEAQKEFTVETFI 336
W + + TV FI
Sbjct: 503 WPXXRVXXSSQXXSXXTVXXFI 568
Score = 74.4 bits (156), Expect(2) = 2e-022
Identities = 36/78 (46%), Positives = 42/78 (53%)
Frame = +1 / -3
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPV 789
+S WG ++QL +P S PCAVM FA GF G Q C+TT P MKS VP
Sbjct: 297 RSAWGVILQLWMELPVFWFGSVLPCAVMAFF*FAPGFLGIRLQLCNTTAAFPNMKSTVPK 118
Query: 790 TRQSRKNCRCACVYSVSW 843
S NCR C Y+VSW
Sbjct: 117 MLHSL*NCRRECAYNVSW 64
Score = 51.5 bits (106), Expect(2) = 2e-022
Identities = 27/59 (45%), Positives = 31/59 (52%)
Frame = +1 / -3
Query: 400 HLARLLMSAPSPRLSTSA*KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRAR 576
H R ++ P S * V + K+P HSSQP G M P M M* VREYSF G R
Sbjct: 504 HFTRFPVAEXXPVFIYSP*YKVFKAKAPSHSSQPAG*MTPSMYDCM*TVREYSFHGLPR 328
>gb|CF395320.1|CF395320 RTDS2_11_C04.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_11_C04_A021 3', mRNA sequence
Length = 666
Score = 133 bits (284), Expect(2) = 1e-054
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -2 / +1
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 229 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 408
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
W G + +T + +FTV FIQG ++ GV ++ GL
Sbjct: 409 WAGYRVITSSQEASKFTVGEFIQGDSWLQSTGVDYVDGL 525
Score = 101 bits (215), Expect(2) = 1e-054
Identities = 39/67 (58%), Positives = 47/67 (70%)
Frame = -2 / +1
Query: 812 QFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNC 633
QF+R+C + GT+DFIFGN+ VV Q+C + PRKP ANQ N ITAQGR D GT +HNC
Sbjct: 1 QFYRECNILGTVDFIFGNAAVVFQSCTMIPRKPGANQKNAITAQGRTDPNQNTGTSIHNC 180
Query: 632 TIEPHPD 612
I P D
Sbjct: 181 KITPDAD 201
>gb|DR101069.1|DR101069 STRR1_70_G10.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_70_G10_A033 3', mRNA sequence
Length = 792
Score = 120 bits (256), Expect(2) = 2e-054
Identities = 46/97 (47%), Positives = 59/97 (60%)
Frame = -2 / -2
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMS 414
G R YL RPWK YSRT+Y+Q + IDP GWLEW GDF L+TLFY E N G GA ++
Sbjct: 296 GLYRAYLGRPWKLYSRTVYLQTFLDDIIDPAGWLEWFGDFALDTLFYGEYMNSGPGAGLA 117
Query: 413 KRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGV 303
+R W G + + FTV FI G +++P G+
Sbjct: 116 RRVTWPGYRIFKAAQEVYPFTVAQFISGAKWLPSTGI 6
Score = 113 bits (241), Expect(2) = 2e-054
Identities = 43/91 (47%), Positives = 58/91 (63%)
Frame = -2 / -2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+ GYQDTLY H+ RQF+R+C + GT+DFIFGN+ VVLQ C + RKP+ N +T
Sbjct: 566 YRCSVIGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVLQKCTMFARKPLPNSKITVT 387
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFKEEAG 594
AQGR+D G +H+C + D G
Sbjct: 386 AQGRKDPNQNTGISIHDCRVTAAADLAPVKG 294
Score = 63.8 bits (133), Expect(2) = 7e-021
Identities = 35/90 (38%), Positives = 45/90 (50%)
Frame = +1 / +1
Query: 316 GMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSVSRPKSPFHSS 495
G + P M +TVN + + + +L P H+ RL AP P S * VS KSP HS+
Sbjct: 19 GNHLAPEMNWATVNG*TSCAALKIL*PGHVTRLASPAPGPLFIYSP*NKVSSAKSPNHSN 198
Query: 496 QPLGSMKPPMSFWM*IVREYSFQGRARYVR 585
P GS+ VREY+FQG R R
Sbjct: 199 HPAGSIISSKKVCRYTVREYNFQGLPR*AR 288
Score = 57.0 bits (118), Expect(2) = 7e-021
Identities = 28/57 (49%), Positives = 32/57 (56%)
Frame = +1 / +1
Query: 679 PCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVTRQSRKNCRCACVYSVSW*P 849
P AV ++ GF + FC+TT LPKMKS VP S N R C YSVSW*P
Sbjct: 379 P*AVTVILELGRGFLANMVHFCNTTAALPKMKSTVP*MSHSL*NWRRECTYSVSW*P 549
>gb|CO175095.1|CO175095 NDL1_48_H04.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_48_H04_A029 3', mRNA sequence
Length = 655
Score = 133 bits (284), Expect(2) = 2e-054
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -2 / +2
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 233 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 412
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
W G + +T + +FTV FIQG ++ GV ++ GL
Sbjct: 413 WAGYRVITSSQEASKFTVGEFIQGDSWLQSTGVDYVDGL 529
Score = 100 bits (212), Expect(2) = 2e-054
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = -2 / +2
Query: 815 RQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHN 636
RQF+R+C + GT+DFIFGN+ VV Q+C + PRKP A Q N ITAQGR D GT +HN
Sbjct: 2 RQFYRECNILGTVDFIFGNAAVVFQSCTMIPRKPGAYQKNAITAQGRTDPNQNTGTSIHN 181
Query: 635 CTIEPHPD 612
C I P D
Sbjct: 182 CKITPDAD 205
>gb|DR386720.1|DR386720 RTHG1_17_B11.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_17_B11_A029 3', mRNA sequence
Length = 807
Score = 131 bits (280), Expect(2) = 3e-054
Identities = 47/97 (48%), Positives = 61/97 (62%)
Frame = -2 / +3
Query: 578 YLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKW 399
YL RPWKEYSRT+++Q+ +G I P GWLEWNG F L TL+Y E NRG GA + R KW
Sbjct: 261 YLGRPWKEYSRTVFMQSFLGDVIQPAGWLEWNGSFALSTLYYGEYMNRGPGAGTTNRVKW 440
Query: 398 GGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPG 288
G + + FTV FI+G ++P GV ++ G
Sbjct: 441 PGYRVINSSSEASSFTVSKFIEGDSWLPSTGVKYVSG 551
Score = 101 bits (215), Expect(2) = 3e-054
Identities = 38/76 (50%), Positives = 51/76 (67%)
Frame = -2 / +3
Query: 839 DTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRS 660
DTLY H+ RQF+R+C + GT+DFIFGNS VV Q+C + R+P+ NQ + TAQGR+D
Sbjct: 3 DTLYAHSFRQFYRECNIYGTVDFIFGNSAVVFQDCNLLARRPLENQKILYTAQGRQDPNE 182
Query: 659 VGGTVLHNCTIEPHPD 612
G + NC + PD
Sbjct: 183 NTGISIQNCNVTAAPD 230
>gb|DR080640.1|DR080640 RTFEPL1_24_D09.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_24_D09_A029 3', mRNA sequence
Length = 821
Score = 113 bits (241), Expect(3) = 3e-054
Identities = 43/91 (47%), Positives = 58/91 (63%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+ GYQDTLY H+ RQF+R+C + GT+DFIFGN+ VVLQ C + RKP+ N +T
Sbjct: 29 YRCSVIGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVLQKCTMFARKPLPNSKITVT 208
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFKEEAG 594
AQGR+D G +H+C + D G
Sbjct: 209 AQGRKDPNQNTGISIHDCRVTAAADLAPVKG 301
Score = 93.2 bits (197), Expect(3) = 3e-054
Identities = 37/77 (48%), Positives = 47/77 (61%)
Frame = -2 / +3
Query: 512 IDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKWGGIKTVTYEEAQKEFTVETFIQ 333
IDP GWLEW GDF L+TLFY E N G GA +++R W G + + FTV FI
Sbjct: 381 IDPAGWLEWFGDFALDTLFYGEYMNSGPGAGLARRVTWPGYRIFKAAQEVYPFTVAQFIS 560
Query: 332 GQQFIPKFGVPFIPGLL 282
G +++P G+ FI GLL
Sbjct: 561 GAKWLPSTGIVFIGGLL 611
Score = 57.4 bits (119), Expect(3) = 6e-021
Identities = 30/77 (38%), Positives = 40/77 (51%)
Frame = +1 / -2
Query: 283 SNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KS 462
SNP + P G + P M +TVN + + + +L P H+ RL AP P S *
Sbjct: 610 SNPPIKTIPVDGNHLAPEMNWATVNG*TSCAALKIL*PGHVTRLASPAPGPLFIYSP*NK 431
Query: 463 VSRPKSPFHSSQPLGSM 513
VS KSP HS+ P GS+
Sbjct: 430 VSSAKSPNHSNHPAGSI 380
Score = 57.0 bits (118), Expect(3) = 6e-021
Identities = 28/57 (49%), Positives = 32/57 (56%)
Frame = +1 / -3
Query: 679 PCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVTRQSRKNCRCACVYSVSW*P 849
P AV ++ GF + FC+TT LPKMKS VP S N R C YSVSW*P
Sbjct: 216 P*AVTVILELGRGFLANMVHFCNTTAALPKMKSTVP*MSHSL*NWRRECTYSVSW*P 46
Score = 44.6 bits (91), Expect(3) = 3e-054
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -2 / +2
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIG 519
G R YL RPWK YSRT+Y+QN G
Sbjct: 299 GLYRAYLGRPWKLYSRTVYLQNFFG 373
Score = 24.0 bits (46), Expect(3) = 6e-021
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1 / -3
Query: 520 PMSFWM*IVREYSFQGRARYVR 585
P F VREY+FQG R R
Sbjct: 372 PKKFCRYTVREYNFQGLPR*AR 307
>gb|DR080710.1|DR080710 RTFEPL1_24_D09.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_24_D09_A029 5', mRNA sequence
Length = 779
Score = 113 bits (241), Expect(3) = 3e-054
Identities = 43/91 (47%), Positives = 58/91 (63%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+ GYQDTLY H+ RQF+R+C + GT+DFIFGN+ VVLQ C + RKP+ N +T
Sbjct: 101 YRCSVIGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVLQKCTMFARKPLPNSKITVT 280
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFKEEAG 594
AQGR+D G +H+C + D G
Sbjct: 281 AQGRKDPNQNTGISIHDCRVTAAADLAPVKG 373
Score = 93.2 bits (197), Expect(3) = 3e-054
Identities = 37/77 (48%), Positives = 47/77 (61%)
Frame = -2 / +3
Query: 512 IDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKWGGIKTVTYEEAQKEFTVETFIQ 333
IDP GWLEW GDF L+TLFY E N G GA +++R W G + + FTV FI
Sbjct: 453 IDPAGWLEWFGDFALDTLFYGEYMNSGPGAGLARRVTWPGYRIFKAAQEVYPFTVAQFIS 632
Query: 332 GQQFIPKFGVPFIPGLL 282
G +++P G+ FI GLL
Sbjct: 633 GAKWLPSTGIVFIGGLL 683
Score = 57.4 bits (119), Expect(3) = 6e-021
Identities = 30/77 (38%), Positives = 40/77 (51%)
Frame = +1 / -2
Query: 283 SNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KS 462
SNP + P G + P M +TVN + + + +L P H+ RL AP P S *
Sbjct: 682 SNPPIKTIPVDGNHLAPEMNWATVNG*TSCAALKIL*PGHVTRLASPAPGPLFIYSP*NK 503
Query: 463 VSRPKSPFHSSQPLGSM 513
VS KSP HS+ P GS+
Sbjct: 502 VSSAKSPNHSNHPAGSI 452
Score = 57.0 bits (118), Expect(3) = 6e-021
Identities = 28/57 (49%), Positives = 32/57 (56%)
Frame = +1 / -3
Query: 679 PCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVTRQSRKNCRCACVYSVSW*P 849
P AV ++ GF + FC+TT LPKMKS VP S N R C YSVSW*P
Sbjct: 288 P*AVTVILELGRGFLANMVHFCNTTAALPKMKSTVP*MSHSL*NWRRECTYSVSW*P 118
Score = 44.6 bits (91), Expect(3) = 3e-054
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -2 / +2
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIG 519
G R YL RPWK YSRT+Y+QN G
Sbjct: 371 GLYRAYLGRPWKLYSRTVYLQNFFG 445
Score = 24.0 bits (46), Expect(3) = 6e-021
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1 / -3
Query: 520 PMSFWM*IVREYSFQGRARYVR 585
P F VREY+FQG R R
Sbjct: 444 PKKFCRYTVREYNFQGLPR*AR 379
>gb|BQ701382.1|BQ701382 NXSI_063_E07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_063_E07 5' similar to Arabidopsis thaliana
sequence At1g02805 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 558
Score = 131 bits (281), Expect(2) = 2e-053
Identities = 49/85 (57%), Positives = 58/85 (68%)
Frame = -2 / +3
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C YQDTLY H+ RQF+ C + GT+DFIFGN+ VV Q+C + PRKP ANQ N IT
Sbjct: 30 YRCKIAAYQDTLYAHSLRQFYSQCSILGTVDFIFGNAAVVFQSCTLMPRKPGANQKNAIT 209
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D GT +HNC I PH D
Sbjct: 210 AQGRTDPNQKTGTSIHNCKISPHAD 284
Score = 98.7 bits (209), Expect(2) = 2e-053
Identities = 39/82 (47%), Positives = 48/82 (58%)
Frame = -2 / +3
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWK YSRT+Y+Q+ I G I P GWLEW+G F L+TL+Y E N G G+ R K
Sbjct: 312 TYLGRPWKXYSRTVYMQSYIDGVIQPAGWLEWDGAFALKTLYYGEYMNTGPGSATGNRVK 491
Query: 401 WGGIKTVTYEEAQKEFTVETFI 336
G + +FTV I
Sbjct: 492 XXGYRVXXSSXXXSKFTVGXXI 557
>gb|DR071903.1|DR071903 RTDK1_22_G03.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_22_G03_A029 5', mRNA sequence
Length = 669
Score = 116 bits (248), Expect(2) = 2e-053
Identities = 45/93 (48%), Positives = 57/93 (61%)
Frame = -2 / +2
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMS 414
G R YL RPWK YSRT+Y+Q + IDP GWLEW GDF L+TLFY E N G GA ++
Sbjct: 389 GLYRAYLGRPWKLYSRTVYLQTFLDDIIDPAGWLEWFGDFALDTLFYGEYMNSGPGARLA 568
Query: 413 KRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIP 315
+R W G + + FTV FI G +++P
Sbjct: 569 RRVTWPGYRIFKAAQEVYPFTVAQFISGAKWLP 667
Score = 113 bits (241), Expect(2) = 2e-053
Identities = 43/91 (47%), Positives = 58/91 (63%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+ GYQDTLY H+ RQF+R+C + GT+DFIFGN+ VVLQ C + RKP+ N +T
Sbjct: 119 YRCSVIGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVLQKCTMFARKPLPNSKITVT 298
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFKEEAG 594
AQGR+D G +H+C + D G
Sbjct: 299 AQGRKDPNQNTGISIHDCRVTAAADLAPVKG 391
Score = 63.4 bits (132), Expect(2) = 1e-020
Identities = 35/90 (38%), Positives = 45/90 (50%)
Frame = +1 / -1
Query: 316 GMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSVSRPKSPFHSS 495
G + P M +TVN + + + +L P H+ RL AP P S * VS KSP HS+
Sbjct: 666 GNHLAPEMNWATVNG*TSCAALKIL*PGHVTRLASLAPGPLFIYSP*NKVSSAKSPNHSN 487
Query: 496 QPLGSMKPPMSFWM*IVREYSFQGRARYVR 585
P GS+ VREY+FQG R R
Sbjct: 486 HPAGSIISSKKVCRYTVREYNFQGLPR*AR 397
Score = 57.0 bits (118), Expect(2) = 1e-020
Identities = 28/57 (49%), Positives = 32/57 (56%)
Frame = +1 / -1
Query: 679 PCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVTRQSRKNCRCACVYSVSW*P 849
P AV ++ GF + FC+TT LPKMKS VP S N R C YSVSW*P
Sbjct: 306 P*AVTVILELGRGFLANMVHFCNTTAALPKMKSTVP*MSHSL*NWRRECTYSVSW*P 136
>gb|CO170015.1|CO170015 NDL1_11_D11.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_11_D11_A029 3', mRNA sequence
Length = 652
Score = 133 bits (284), Expect(2) = 3e-053
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -2 / +3
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 225 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 404
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
W G + +T + +FTV FIQG ++ GV ++ GL
Sbjct: 405 WAGYRVITSSQEASKFTVGEFIQGDSWLQSTGVDYVDGL 521
Score = 96.4 bits (204), Expect(2) = 3e-053
Identities = 37/65 (56%), Positives = 45/65 (69%)
Frame = -2 / +3
Query: 806 FRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNCTI 627
+R+C + GT+DFIFGN+ VV Q+C + PRKP ANQ N ITAQGR D GT +HNC I
Sbjct: 3 YRECNILGTVDFIFGNAAVVFQSCTMIPRKPGANQKNAITAQGRTDPNQNTGTSIHNCKI 182
Query: 626 EPHPD 612
P D
Sbjct: 183 TPDAD 197
>gb|BX679734.1|BX679734 BX679734 RS Pinus pinaster cDNA clone RS32E05, mRNA sequence
Length = 553
Score = 124 bits (265), Expect(2) = 3e-053
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = -2 / +3
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQF+R+C + GT+DFIFGN+ V QNC + RKPM NQ N T
Sbjct: 3 YRCSFKGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNLLARKPMDNQKNCFT 182
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D G + C + P PD
Sbjct: 183 AQGRDDPNQNTGISIQKCNVSPAPD 257
Score = 105 bits (223), Expect(2) = 3e-053
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -2 / +3
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
T+L RPWK YSRT+Y+++ I +DP GWLEW+GDF L TL+Y E N G GA + R +
Sbjct: 285 TFLGRPWKNYSRTVYLESHIDDVVDPAGWLEWSGDFALTTLYYGEYMNSGPGAGTAARVQ 464
Query: 401 WGGIKTVTYEEAQ 363
W G T+ +AQ
Sbjct: 465 WPGYHTMNISDAQ 503
>gb|CF471803.1|CF471803 RTDS1_6_H07.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_6_H07_A015 5', mRNA sequence
Length = 662
Score = 133 bits (284), Expect(2) = 6e-053
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -2 / -1
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 440 TYLGRPWKEYSRTVYMQSCLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 261
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
W G + +T + +FTV FIQG ++ GV ++ GL
Sbjct: 260 WAGYRVITSSQEASKFTVGEFIQGDSWLQSTGVDYVDGL 144
Score = 95.5 bits (202), Expect(2) = 6e-053
Identities = 36/61 (59%), Positives = 44/61 (72%)
Frame = -2 / -3
Query: 803 RDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNCTIE 624
R+C + GT+DFIFGN+ VV Q+C + PRKP ANQ N+ITAQGR D GT +HNC I
Sbjct: 660 RECNILGTVDFIFGNAAVVFQSCTMIPRKPGANQTNVITAQGRTDPNQNTGTSIHNCKIT 481
Query: 623 P 621
P
Sbjct: 480 P 478
>gb|CV034683.1|CV034683 RTNACL1_10_H03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_10_H03_A029 5', mRNA sequence
Length = 770
Score = 131 bits (281), Expect(2) = 8e-053
Identities = 47/97 (48%), Positives = 61/97 (62%)
Frame = -2 / +1
Query: 578 YLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKW 399
YL RPWKEYSRT+++Q+ +G I P GWLEWNG F L TL+Y E NRG GA + R KW
Sbjct: 259 YLGRPWKEYSRTVFMQSFLGDLIQPAGWLEWNGSFALSTLYYGEYMNRGPGAGTTNRVKW 438
Query: 398 GGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPG 288
G + + FTV FI+G ++P GV ++ G
Sbjct: 439 PGYRVINSSSEASSFTVSKFIEGDSWLPSTGVKYVSG 549
Score = 96.4 bits (204), Expect(2) = 8e-053
Identities = 36/74 (48%), Positives = 49/74 (66%)
Frame = -2 / +1
Query: 833 LYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVG 654
LY H+ RQF+R+C + GT+DFIFGNS VV Q+C + R+P+ NQ + TAQGR+D
Sbjct: 7 LYAHSFRQFYRECNIYGTVDFIFGNSAVVFQDCNLLARRPLENQKILYTAQGRQDPNENT 186
Query: 653 GTVLHNCTIEPHPD 612
G + NC + PD
Sbjct: 187 GISIQNCNVTAAPD 228
>gb|DR100880.1|DR100880 STRR1_69_B01.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_69_B01_A033 3', mRNA sequence
Length = 870
Score = 120 bits (256), Expect(2) = 2e-052
Identities = 45/85 (52%), Positives = 57/85 (67%)
Frame = -2 / -3
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQF+R+C + GT+DFIFGN+ VV QNC + RKPM +Q N T
Sbjct: 544 YRCSFKGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLLARKPMDSQKNCFT 365
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D G + C + PD
Sbjct: 364 AQGRDDPNQNTGISIQKCNVSAAPD 290
Score = 106 bits (226), Expect(2) = 2e-052
Identities = 38/74 (51%), Positives = 51/74 (68%)
Frame = -2 / -3
Query: 584 RTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRA 405
+T+L RPWK YSRT+YI++ I +DP GWLEW+GDF L TL+Y E N G GA ++R
Sbjct: 265 QTFLGRPWKNYSRTVYIESYIDDVVDPAGWLEWSGDFALTTLYYGEYMNSGPGAGTTERV 86
Query: 404 KWGGIKTVTYEEAQ 363
+W G T+ +AQ
Sbjct: 85 QWPGYHTMNISDAQ 44
>gb|CO163373.1|CO163373 FLD1_41_E03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_41_E03_A029 3', mRNA sequence
Length = 805
Score = 120 bits (256), Expect(2) = 2e-052
Identities = 45/85 (52%), Positives = 57/85 (67%)
Frame = -2 / +3
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQF+R+C + GT+DFIFGN+ VV QNC + RKPM +Q N T
Sbjct: 105 YRCSFKGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLLARKPMDSQKNCFT 284
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D G + C + PD
Sbjct: 285 AQGRDDPNQNTGISIQKCNVSAAPD 359
Score = 106 bits (226), Expect(2) = 2e-052
Identities = 38/74 (51%), Positives = 51/74 (68%)
Frame = -2 / +3
Query: 584 RTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRA 405
+T+L RPWK YSRT+YI++ I +DP GWLEW+GDF L TL+Y E N G GA ++R
Sbjct: 384 QTFLGRPWKNYSRTVYIESYIDDVVDPAGWLEWSGDFALTTLYYGEYMNSGPGAGTTERV 563
Query: 404 KWGGIKTVTYEEAQ 363
+W G T+ +AQ
Sbjct: 564 QWPGYHTMNISDAQ 605
>gb|CO159878.1|CO159878 FLD1_16_D03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_16_D03_A029 5', mRNA sequence
Length = 777
Score = 120 bits (256), Expect(2) = 3e-052
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = -2 / +3
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQF+R+C + GT+DFIFGNS VV Q+C + R+P+ NQ + T
Sbjct: 282 YRCSFKGYQDTLYAHSFRQFYRECNIYGTVDFIFGNSAVVFQDCNLLARRPLENQKILYT 461
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR+D G + NC + PD
Sbjct: 462 AQGRQDPNENTGISIQNCNVTAAPD 536
Score = 105 bits (225), Expect(2) = 3e-052
Identities = 37/66 (56%), Positives = 46/66 (69%)
Frame = -2 / +3
Query: 578 YLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKW 399
YL RPWKEYSRT+++Q+ +G I P GWLEWNG F L TL+Y E NRG GA + R KW
Sbjct: 567 YLGRPWKEYSRTVFMQSFLGDLIQPAGWLEWNGSFALSTLYYGEYMNRGPGAGTTNRVKW 746
Query: 398 GGIKTV 381
G + +
Sbjct: 747 PGYRVI 764
Score = 69.8 bits (146), Expect(2) = 1e-020
Identities = 32/62 (51%), Positives = 36/62 (58%)
Frame = +1 / -3
Query: 394 PPHLARLLMSAPSPRLSTSA*KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRA 573
P HL R ++ AP PR S * V R K PFHSSQP G ++ P M VREYSF G
Sbjct: 751 PGHLTRFVVPAPGPRFMYSP*YRVLRAKDPFHSSQPAG*IRSPRKDCMKTVREYSFHGLP 572
Query: 574 RY 579
RY
Sbjct: 571 RY 566
Score = 50.6 bits (104), Expect(2) = 1e-020
Identities = 34/84 (40%), Positives = 40/84 (47%)
Frame = +1 / -3
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPV 789
+SG +Q +P S P AV + F+ G R Q TT ELPKMKS VP
Sbjct: 538 RSGAAVTLQF*MEIPVFSLGSCLP*AV*RIF*FSRGLRASKLQS*KTTAELPKMKSTVP* 359
Query: 790 TRQSRKNCRCACVYSVSW*PSKVH 861
S N R Y VSW*P K+H
Sbjct: 358 MLHSL*N*RKEWAYRVSW*PLKLH 287
>gb|CO163440.1|CO163440 FLD1_41_E03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_41_E03_A029 5', mRNA sequence
Length = 831
Score = 120 bits (256), Expect(2) = 1e-051
Identities = 45/85 (52%), Positives = 57/85 (67%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQF+R+C + GT+DFIFGN+ VV QNC + RKPM +Q N T
Sbjct: 206 YRCSFKGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLLARKPMDSQKNCFT 385
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D G + C + PD
Sbjct: 386 AQGRDDPNQNTGISIQKCNVSAAPD 460
Score = 104 bits (221), Expect(2) = 1e-051
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = -2 / +2
Query: 584 RTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRA 405
+T+L RPWK YSRT+YI++ I +DP GWLEW+GDF L TL+Y E N G GA ++R
Sbjct: 485 QTFLGRPWKNYSRTVYIESYIDDVVDPAGWLEWSGDFALTTLYYGEYMNSGPGAGTTERV 664
Query: 404 KWGGIKTVTYEEA 366
+W G T+ +A
Sbjct: 665 QWPGYHTMNISDA 703
>gb|DR047978.1|DR047978 RTBOR1_5_G11.g2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_5_G11_A029 5', mRNA sequence
Length = 813
Score = 131 bits (280), Expect(2) = 3e-051
Identities = 49/85 (57%), Positives = 60/85 (70%)
Frame = -2 / +3
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C YQDTLY H+ RQF+R+C + GT+DFIFGN+ VV Q+C + PRKP ANQ N+IT
Sbjct: 372 YRCKIAAYQDTLYAHSLRQFYRECNILGTVDFIFGNAAVVFQSCTMIPRKPGANQTNVIT 551
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D GT +HNC I P D
Sbjct: 552 AQGRTDPNQNTGTSIHNCKITPDAD 626
Score = 91.8 bits (194), Expect(2) = 3e-051
Identities = 33/53 (62%), Positives = 39/53 (73%)
Frame = -2 / +3
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGA 423
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA
Sbjct: 654 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGA 812
>gb|CF385408.1|CF385408 RTDR1_3_F11.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_3_F11_A015 5', mRNA
sequence
Length = 769
Score = 129 bits (276), Expect(2) = 2e-050
Identities = 51/104 (49%), Positives = 64/104 (61%)
Frame = -2 / +2
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMS 414
G R YL RPWK YSRT+Y+Q + IDP GWLEW GDF L+TLFY E N G GA ++
Sbjct: 239 GLYRAYLGRPWKLYSRTVYLQTFLDDIIDPAGWLEWFGDFALDTLFYGEYMNSGPGAGLA 418
Query: 413 KRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLL 282
+R W G + + FTV FI G +++P G+ FI GLL
Sbjct: 419 RRVTWPGYRIFKAAQEVYPFTVAQFISGAKWLPSTGIVFIGGLL 550
Score = 90.9 bits (192), Expect(2) = 2e-050
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = -2 / +2
Query: 833 LYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVG 654
LY ++ RQF+R+C + GT+DFIFGN+ VVLQ C + RKP+ N +TAQGR+D
Sbjct: 2 LYVYSLRQFYRECDIYGTVDFIFGNAAVVLQKCTMFARKPLPNSKITVTAQGRKDPNQNT 181
Query: 653 GTVLHNCTIEPHPDFKEEAG 594
G +H+C + D G
Sbjct: 182 GISIHDCRVTAAADLAPVKG 241
>gb|DR022264.1|DR022264 STRS1_49_H09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_49_H09_A034 5', mRNA sequence
Length = 651
Score = 133 bits (284), Expect(2) = 2e-050
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -2 / +2
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ + I P GWLEWNG F L+TL+Y E N G GA + R K
Sbjct: 206 TYLGRPWKEYSRTVYMQSYLDDVIQPAGWLEWNGSFALQTLYYGEYMNTGPGAATANRVK 385
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
W G + +T + +FTV FIQG ++ GV ++ GL
Sbjct: 386 WAGYRVITSSQEASKFTVGEFIQGDSWLQSTGVDYVDGL 502
Score = 86.8 bits (183), Expect(2) = 2e-050
Identities = 35/58 (60%), Positives = 40/58 (68%)
Frame = -2 / +2
Query: 785 GTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPD 612
GT+DFIFGN+ VV Q+C + PRKP ANQ N ITAQGR D GT +HNC I P D
Sbjct: 5 GTVDFIFGNAAVVFQSCTMIPRKPGANQKNAITAQGRTDPNQNTGTSIHNCKITPDAD 178
>gb|BQ702714.1|BQ702714 NXSI_131_G01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_131_G01 5' similar to Arabidopsis thaliana
sequence At1g02805 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 495
Score = 131 bits (281), Expect(2) = 2e-050
Identities = 49/85 (57%), Positives = 58/85 (68%)
Frame = -2 / +1
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C YQDTLY H+ RQF+ C + GT+DFIFGN+ VV Q+C + PRKP ANQ N IT
Sbjct: 31 YRCKIAAYQDTLYAHSLRQFYSQCSILGTVDFIFGNAAVVFQSCTLMPRKPGANQKNAIT 210
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D GT +HNC I PH D
Sbjct: 211 AQGRTDPNQKTGTSIHNCKISPHAD 285
Score = 88.1 bits (186), Expect(2) = 2e-050
Identities = 32/53 (60%), Positives = 39/53 (73%)
Frame = -2 / +1
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGA 423
TYL RPWK YSRT+Y+Q+ I G I P GWLEW+G F L+TL+Y E N G G+
Sbjct: 313 TYLGRPWKXYSRTVYMQSYIDGVIQPAGWLEWDGAFALKTLYYGEYMNTGPGS 471
>gb|DR168448.1|DR168448 RTPHOS1_25_B11.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_25_B11_A029 5', mRNA sequence
Length = 629
Score = 126 bits (270), Expect(2) = 8e-050
Identities = 49/85 (57%), Positives = 61/85 (71%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQF+RDC + GTIDFIFGN+ VVLQNC + R+P+ANQ I T
Sbjct: 155 YRCSFKGYQDTLYVHSLRQFYRDCDIYGTIDFIFGNAAVVLQNCNLLARRPLANQQIIYT 334
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR+D G + NCT+ D
Sbjct: 335 AQGRQDPNENTGISIQNCTVTAASD 409
Score = 91.3 bits (193), Expect(2) = 8e-050
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = -2 / +2
Query: 578 YLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKW 399
YL RPW+ YSRT+++++ + I P GWLEWNG F L TL+Y E N G GA + R +W
Sbjct: 440 YLGRPWRNYSRTVFMKSYLDDLIQPAGWLEWNGSFALSTLYYGEYMNSGPGACTANRVRW 619
Query: 398 GG 393
G
Sbjct: 620 AG 625
Score = 72.5 bits (152), Expect(2) = 4e-022
Identities = 38/77 (49%), Positives = 42/77 (54%)
Frame = +1 / -3
Query: 631 VQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVTRQSRKN 810
VQ +P S PCAV ++ WFA G R QFC TT LPKMKSMVP QS N
Sbjct: 390 VQF*IEIPVFSLGSCLPCAV*IICWFARGLRARRLQFCRTTAALPKMKSMVP*ISQSL*N 211
Query: 811 CRCACVYSVSW*PSKVH 861
R SVSW P K+H
Sbjct: 210 WRSE*T*SVSWYPLKLH 160
Score = 52.4 bits (108), Expect(2) = 4e-022
Identities = 28/62 (45%), Positives = 32/62 (51%)
Frame = +1 / -3
Query: 394 PPHLARLLMSAPSPRLSTSA*KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRA 573
P HL RL + AP P S * V R K PFHS+QP G +K +M VRE G
Sbjct: 624 PAHLTRLAVHAPGPLFMYSP*YRVLRAKLPFHSNQPAG*IKSSR*DFMNTVRE*FLHGLP 445
Query: 574 RY 579
RY
Sbjct: 444 RY 439
>gb|BQ698563.1|BQ698563 NXPV_071_D11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_071_D11 5' similar to Arabidopsis
thaliana sequence At4g02330 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 521
Score = 115 bits (246), Expect(2) = 2e-049
Identities = 42/87 (48%), Positives = 53/87 (60%)
Frame = -2 / +3
Query: 578 YLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKW 399
YL RPWKEYSRT+++Q+ +G I P GWLEWNG F L TL+Y E NRG GA + R KW
Sbjct: 261 YLGRPWKEYSRTVFMQSFLGDLIQPAGWLEWNGSFALSTLYYGEYMNRGPGAGTTNRVKW 440
Query: 398 GGIKTVTYEEAQKEFTVETFIQGQQFI 318
G + + FTV FI ++
Sbjct: 441 PGYRVINSSSEXSSFTVSKFIXXDSWL 521
Score = 101 bits (215), Expect(2) = 2e-049
Identities = 38/76 (50%), Positives = 51/76 (67%)
Frame = -2 / +3
Query: 839 DTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRS 660
DTLY H+ RQF+R+C + GT+DFIFGNS VV Q+C + R+P+ NQ + TAQGR+D
Sbjct: 3 DTLYAHSFRQFYRECNIYGTVDFIFGNSAVVFQDCNLLARRPLENQKILYTAQGRQDPNE 182
Query: 659 VGGTVLHNCTIEPHPD 612
G + NC + PD
Sbjct: 183 NTGISIQNCNVTAAPD 230
>gb|CX713159.1|CX713159 RTPQ1_7_H02.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_7_H02_A032 3', mRNA sequence
Length = 655
Score = 129 bits (276), Expect(2) = 2e-049
Identities = 49/100 (49%), Positives = 64/100 (64%)
Frame = -2 / +3
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAK 402
TYL RPWKEYSRT+Y+Q+ I G I P GWLEW+G F L+TL+Y E N G G+ R K
Sbjct: 195 TYLGRPWKEYSRTVYMQSYIDGVIQPAGWLEWDGAFALKTLYYGEYMNTGPGSATGNRVK 374
Query: 401 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLL 282
W G + + + +FTV FIQG ++ GV +I GL+
Sbjct: 375 WPGYRVIKSSQEASKFTVGEFIQGNSWLQSTGVDYIDGLI 494
Score = 87.2 bits (184), Expect(2) = 2e-049
Identities = 35/55 (63%), Positives = 39/55 (70%)
Frame = -2 / +3
Query: 776 DFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPD 612
DFIFGN+ VVLQ+C + PRKP ANQ N ITAQGR D GT +HNC I PH D
Sbjct: 3 DFIFGNAAVVLQSCNLMPRKPGANQKNAITAQGRTDPNQNTGTSIHNCKITPHAD 167
>gb|AW784073.1|AW784073 NXNV_117_D06_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_117_D06 5' similar to Arabidopsis thaliana
sequence At1g02805 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 587
Score = 135 bits (290), Expect(2) = 3e-049
Identities = 51/85 (60%), Positives = 61/85 (71%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C YQDTLY H+ RQF+R+C + GT+DFIFGN+ VVLQ+C + PRKP ANQ N IT
Sbjct: 95 YRCKIAAYQDTLYAHSLRQFYRECNILGTVDFIFGNAAVVLQSCNLMPRKPGANQKNAIT 274
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPD 612
AQGR D GT +HNC I PH D
Sbjct: 275 AQGRTDPNQNTGTSIHNCKITPHAD 349
Score = 80.3 bits (169), Expect(2) = 3e-049
Identities = 29/50 (58%), Positives = 35/50 (70%)
Frame = -2 / +2
Query: 581 TYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRG 432
TYL RPWKEYSRT+Y+Q+ I G I P WLEW+G F L+ +Y E N G
Sbjct: 377 TYLGRPWKEYSRTVYMQSYIDGVIQPAXWLEWDGAFALKXXYYGEYMNTG 526
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 351,769,236
Number of Sequences: 355925
Number of extensions: 5142527
Number of successful extensions: 77148
Number of sequences better than 1.0e-020: 249
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 12724564220
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)