TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3838122.2.1
(1865 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR025015.1|DR025015 STRS1_69_C05.b1_A034 Shoot tip pitch... 218 1e-093
gb|CO364724.1|CO364724 RTK1_21_A05.g1_A029 Roots minus pota... 216 3e-092
gb|CF402009.1|CF402009 RTWW1_16_H11.g1_A015 Well-watered lo... 258 2e-081
gb|DR686509.1|DR686509 EST1076587 Normalized pine embryo li... 149 4e-081
gb|DR097982.1|DR097982 STRR1_38_G11.b1_A033 Stem Response R... 224 2e-080
gb|CX650195.1|CX650195 COLD1_44_D01.b1_A029 Root cold Pinus... 257 3e-080
gb|DR690484.1|DR690484 EST1080570 Normalized pine embryo li... 139 2e-074
gb|DR093703.1|DR093703 STRR1_9_H08.g1_A033 Stem Response Re... 226 2e-074
gb|DR385575.1|DR385575 RTHG1_9_B08.g1_A029 Roots plus added... 187 2e-073
gb|CO369494.1|CO369494 RTK1_47_C06.g1_A029 Roots minus pota... 168 2e-073
gb|CF478060.1|CF478060 RTWW3_17_H12.g1_A022 Well-watered lo... 241 1e-072
gb|DR094404.1|DR094404 STRR1_14_H05.b1_A033 Stem Response R... 150 1e-068
gb|CF403042.1|CF403042 RTWW1_24_A01.g1_A015 Well-watered lo... 224 4e-067
gb|CO198745.1|CO198745 GEO1_16_E03.b1_A029 Root gravitropis... 177 4e-067
gb|CO364064.1|CO364064 RTK1_13_A12.g1_A029 Roots minus pota... 146 5e-066
gb|DR014430.1|DR014430 HEAT1_49_A07.g1_A029 Root at 37 C fo... 133 6e-066
gb|DR023520.1|DR023520 STRS1_58_E09.b1_A034 Shoot tip pitch... 146 3e-058
gb|DR093023.1|DR093023 STRR1_5_C02.g1_A033 Stem Response Re... 157 1e-057
gb|DR018248.1|DR018248 STRS1_21_B10.g1_A034 Shoot tip pitch... 105 6e-057
gb|CF400266.1|CF400266 RTWW1_4_E08.b1_A015 Well-watered lob... 100 1e-056
gb|CF471267.1|CF471267 RTDS1_2_E05.g1_A015 Drought-stressed... 141 2e-056
gb|CF386768.1|CF386768 RTDR1_16_A04.g1_A015 Loblolly pine r... 109 3e-052
gb|DR690351.1|DR690351 EST1080437 Normalized pine embryo li... 151 4e-052
gb|DR023588.1|DR023588 STRS1_58_E09.g1_A034 Shoot tip pitch... 168 9e-052
gb|CO363936.1|CO363936 RTK1_12_E03.g1_A029 Roots minus pota... 89 3e-050
gb|DR023277.1|DR023277 STRS1_56_C06.g1_A034 Shoot tip pitch... 165 2e-049
gb|CF671389.1|CF671389 RTCNT1_56_F07.g1_A029 Root control P... 144 4e-049
gb|DR093619.1|DR093619 STRR1_9_H08.b1_A033 Stem Response Re... 146 9e-049
gb|DR167118.1|DR167118 RTPHOS1_16_G01.g1_A029 Roots minus p... 81 3e-047
gb|CO363986.1|CO363986 RTK1_13_A12.b1_A029 Roots minus pota... 146 6e-047
gb|DR385496.1|DR385496 RTHG1_9_B08.b1_A029 Roots plus added... 99 3e-043
gb|DT633444.1|DT633444 EST1148375 Normalized pine embryo li... 168 3e-042
gb|DR098925.1|DR098925 STRR1_48_G02.g1_A033 Stem Response R... 128 2e-041
gb|DT636133.1|DT636133 EST1151064 Normalized pine embryo li... 151 1e-040
gb|DR177171.1|DR177171 RTMNUT1_3_C06.g1_A029 Roots minus mi... 82 2e-039
gb|DR022623.1|DR022623 STRS1_52_G08.b1_A034 Shoot tip pitch... 79 4e-039
gb|DR690131.1|DR690131 EST1080220 Normalized pine embryo li... 86 1e-038
gb|CX649548.1|CX649548 COLD1_36_A10.b1_A029 Root cold Pinus... 144 2e-038
gb|CF478708.1|CF478708 RTWW3_16_A04.g1_A022 Well-watered lo... 158 1e-037
gb|DR117697.1|DR117697 RTMG1_8_C08.g1_A029 Roots minus magn... 79 2e-036
gb|CX649623.1|CX649623 COLD1_36_A10.g1_A029 Root cold Pinus... 144 8e-035
gb|CF471271.1|CF471271 RTDS1_2_E09.g1_A015 Drought-stressed... 102 7e-034
gb|CF388658.1|CF388658 RTDR2_4_G01.g1_A021 Loblolly pine ro... 79 6e-033
gb|DR024426.1|DR024426 STRS1_64_H04.g1_A034 Shoot tip pitch... 73 4e-032
gb|DR167049.1|DR167049 RTPHOS1_16_G01.b1_A029 Roots minus p... 79 3e-031
gb|DR098850.1|DR098850 STRR1_48_G02.b1_A033 Stem Response R... 79 3e-031
gb|CO199666.1|CO199666 GEO2_2_E12.g1_A032 Root gravitropism... 77 4e-031
gb|DR117624.1|DR117624 RTMG1_8_C08.b1_A029 Roots minus magn... 79 3e-029
gb|BF777721.1|BF777721 NXSI_074_E12_F NXSI (Nsf Xylem Side ... 96 8e-029
gb|AL750370.1|AL750370 AL750370 RN Pinus pinaster cDNA clon... 125 9e-028
gb|CF478796.1|CF478796 RTWW3_15_F07.b1_A022 Well-watered lo... 118 1e-025
gb|DR109933.1|DR109933 RTS1_6_D02.g1_A029 Roots minus sulfu... 118 1e-025
gb|BQ695773.1|BQ695773 NXPV_032_E07_F NXPV (Nsf Xylem Plani... 115 9e-025
gb|CF477938.1|CF477938 RTWW3_17_H12.b1_A022 Well-watered lo... 115 1e-024
gb|CF400364.1|CF400364 RTWW1_4_E08.g1_A015 Well-watered lob... 111 1e-023
gb|CF478906.1|CF478906 RTWW3_15_B04.g1_A022 Well-watered lo... 87 4e-023
gb|DR102156.1|DR102156 STRR1_78_H02.g1_A033 Stem Response R... 56 3e-022
gb|DR022694.1|DR022694 STRS1_52_G08.g1_A034 Shoot tip pitch... 79 6e-021
>gb|DR025015.1|DR025015 STRS1_69_C05.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_69_C05_A034 3', mRNA sequence
Length = 869
Score = 218 bits (471), Expect(2) = 1e-093
Identities = 87/179 (48%), Positives = 117/179 (65%)
Frame = -1 / -3
Query: 1232 DAAANAWTPIDAGRDVGIGLRYDWGKFYASKTFYDPAKRRRVLWGWVGETDSERADVSKG 1053
D + P D DVG+GLR D+GK+YASK+FYDP K+RR+LWGWVGETDSE+ D+ KG
Sbjct: 858 DLEKQRFVPDDPALDVGLGLRIDYGKYYASKSFYDPLKQRRILWGWVGETDSEQNDLRKG 679
Query: 1052 WASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTDLSGITIDYGSVFPLNLRRATQL 873
WASLQ +PR V D KT +N++QWP+EE++ LR+ + + GSV + QL
Sbjct: 678 WASLQTVPRAVWFDDKTKTNIIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDGAQL 499
Query: 872 DIEAEFQLDRRAVMSLNEADVGYNCSTSGGAAGRGALGPFGLFVLADRRLRREQTAVYF 696
DIE F+ A + + E + Y+CS GGAAGRG LGPFGL VLA++ L + ++
Sbjct: 498 DIELAFEFPDAAAIEVVEGESVYSCSNGGGAAGRGRLGPFGLLVLAEKNLTEQTAVYFY 322
Score = 146 bits (314), Expect(2) = 1e-093
Identities = 62/99 (62%), Positives = 76/99 (76%)
Frame = -1 / -3
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEATLSLRVLVDH 537
EQTAVYFYVAK DG L T C DE+RSS A++++ + GS+ PVL DE ++S+R LVDH
Sbjct: 345 EQTAVYFYVAKSADGQLQTFLCHDETRSSLASELILGIHGSSFPVLADEKSISVRTLVDH 166
Query: 536 SIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
SIVES+AQGGR TSRVYPT ++ A +FLFNNATAA
Sbjct: 165 SIVESYAQGGRRCITSRVYPTRSLNGAAKLFLFNNATAA 49
Score = 74.8 bits (157), Expect(2) = 8e-027
Identities = 44/99 (44%), Positives = 48/99 (48%)
Frame = +1 / +2
Query: 421 AAVALLKRKTPALA*MASVG*TRDVAVDLPPCAKLSTMEWXXXXXXXXXXXXXXXXXALP 600
AAVALL R + A VG T +V LPPCA LST+EW LP
Sbjct: 50 AAVALLNRNSLAAPFSERVGYTLEVMHRLPPCA*LSTIEWSTRVRTEMLFSSARTGKELP 229
Query: 601 TTRLTMSVALEERDSSWQKCVAREPSRPLAT*K*TAVCS 717
S A E+ SSW K V PS AT*K*TAVCS
Sbjct: 230 WIPSMSSDASEDLVSSWHKKVCNWPSADFAT*K*TAVCS 346
Score = 71.2 bits (149), Expect(2) = 8e-027
Identities = 41/85 (48%), Positives = 45/85 (52%)
Frame = +1 / +2
Query: 955 RSVSTSSTGH*SRLLPVLVSRSTVRGIPCSDAHPLDTSARSESVSPTHPHSTRRRLAGS* 1134
RS S SS GH + VL S T G C +A P S S SVSPTHPH +GS*
Sbjct: 581 RSSSISSIGHWMIFVFVLSSNQTALGTVCKEAQPFLRSFCSLSVSPTHPHRILLCFSGS* 760
Query: 1135 NVLDA*NLPQS*RRPMPTSLPASIG 1209
L+A* P S RRP PTS S G
Sbjct: 761 KDLEA*YFP*SIRRPSPTSRAGSSG 835
>gb|CO364724.1|CO364724 RTK1_21_A05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_21_A05_A029 5', mRNA sequence
Length = 854
Score = 216 bits (467), Expect(2) = 3e-092
Identities = 86/173 (49%), Positives = 115/173 (66%)
Frame = -1 / +2
Query: 1214 WTPIDAGRDVGIGLRYDWGKFYASKTFYDPAKRRRVLWGWVGETDSERADVSKGWASLQG 1035
+ P D DVG+GLR D+GK+YASK+FYDP K+RR+LWGWVGETDSE+ D+ KGWASLQ
Sbjct: 5 FVPDDPALDVGLGLRIDYGKYYASKSFYDPLKQRRILWGWVGETDSEQNDLRKGWASLQT 184
Query: 1034 IPRTVLLDTKTGSNLLQWPVEEVETLRTNSTDLSGITIDYGSVFPLNLRRATQLDIEAEF 855
+PR V D KT +N++QWP+EE++ LR+ + + GSV + QLDIE F
Sbjct: 185 VPRAVWFDDKTKTNIIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDGAQLDIELAF 364
Query: 854 QLDRRAVMSLNEADVGYNCSTSGGAAGRGALGPFGLFVLADRRLRREQTAVYF 696
+ A + E + Y+CS GGAAGRG LGPFGL VLA++ L + ++
Sbjct: 365 EFPDAAAIEAVEGESVYSCSNGGGAAGRGRLGPFGLLVLAEKNLTEQTAVYFY 523
Score = 144 bits (308), Expect(2) = 3e-092
Identities = 61/99 (61%), Positives = 75/99 (75%)
Frame = -1 / +2
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEATLSLRVLVDH 537
EQTAVYFYVAK D L T C DE+RSS A++++ + GS+ PVL DE ++S+R LVDH
Sbjct: 500 EQTAVYFYVAKSADSQLQTFLCHDETRSSLASELILGIHGSSFPVLADEKSISVRTLVDH 679
Query: 536 SIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
SIVES+AQGGR TSRVYPT ++ A +FLFNNATAA
Sbjct: 680 SIVESYAQGGRRCITSRVYPTRSLNGAAKLFLFNNATAA 796
Score = 71.2 bits (149), Expect(2) = 2e-025
Identities = 41/85 (48%), Positives = 45/85 (52%)
Frame = +1 / -3
Query: 955 RSVSTSSTGH*SRLLPVLVSRSTVRGIPCSDAHPLDTSARSESVSPTHPHSTRRRLAGS* 1134
RS S SS GH + VL S T G C +A P S S SVSPTHPH +GS*
Sbjct: 264 RSSSISSIGHWMIFVFVLSSNQTALGTVCKEAQPFLRSFCSLSVSPTHPHRILLCFSGS* 85
Query: 1135 NVLDA*NLPQS*RRPMPTSLPASIG 1209
L+A* P S RRP PTS S G
Sbjct: 84 KDLEA*YFP*SIRRPSPTSRAGSSG 10
Score = 70.3 bits (147), Expect(2) = 2e-025
Identities = 43/99 (43%), Positives = 47/99 (47%)
Frame = +1 / -3
Query: 421 AAVALLKRKTPALA*MASVG*TRDVAVDLPPCAKLSTMEWXXXXXXXXXXXXXXXXXALP 600
AAVALL R + A VG T +V LPPCA LST+EW LP
Sbjct: 795 AAVALLNRNSLAAPFSERVGYTLEVMHRLPPCA*LSTIEWSTRVRTEMLFSSARTGKELP 616
Query: 601 TTRLTMSVALEERDSSWQKCVAREPSRPLAT*K*TAVCS 717
S A E+ SSW K V S AT*K*TAVCS
Sbjct: 615 WIPSMSSDASEDLVSSWHKKVCNWLSADFAT*K*TAVCS 499
>gb|CF402009.1|CF402009 RTWW1_16_H11.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_16_H11_A015 5', mRNA sequence
Length = 754
Score = 258 bits (557), Expect(2) = 2e-081
Identities = 102/201 (50%), Positives = 135/201 (67%)
Frame = -1 / +1
Query: 1298 VLHVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTFYDPAK 1119
V HV+KAS DDD++DYYA+G YD + P D DVG+GLR D+GK+YASK+FYDP K
Sbjct: 34 VKHVLKASFDDDKNDYYAIGTYDLEKQRFVPDDPALDVGLGLRIDYGKYYASKSFYDPLK 213
Query: 1118 RRRVLWGWVGETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTD 939
+RR+LWGWVGETDSE+ D+ KGWASLQ +PR V D KT +N++QWP+EE++ LR+
Sbjct: 214 QRRILWGWVGETDSEQNDLRKGWASLQTVPRAVWFDDKTKTNIIQWPIEEIDELRSVELV 393
Query: 938 LSGITIDYGSVFPLNLRRATQLDIEAEFQLDRRAVMSLNEADVGYNCSTSGGAAGRGALG 759
+ + GSV + QLDIE F+ A + E + Y+CS GGAAGRG LG
Sbjct: 394 VENELLRPGSVVEVGATDGAQLDIELAFEFPDAAAIEAVEGESVYSCSNGGGAAGRGRLG 573
Query: 758 PFGLFVLADRRLRREQTAVYF 696
PFGL VLA++ L + ++
Sbjct: 574 PFGLLVLAEKNLTEQTAVYFY 636
Score = 66.6 bits (139), Expect(2) = 2e-081
Identities = 27/46 (58%), Positives = 34/46 (73%)
Frame = -1 / +1
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVL 579
EQTAVYFYVAK DG L T C DE+RSS A++++ + GS+ PVL
Sbjct: 613 EQTAVYFYVAKSTDGQLQTFLCHDETRSSLASELILGIHGSSFPVL 750
>gb|DR686509.1|DR686509 EST1076587 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABG81 3' end, mRNA sequence
Length = 728
Score = 149 bits (321), Expect(4) = 4e-081
Identities = 61/91 (67%), Positives = 66/91 (72%)
Frame = -1 / +2
Query: 1823 WRRLPLAMVPDQWYDTNGVWTGSATTLPDGRLAMLYRGSTNASVQVQCLAVPADDADPLL 1644
W L LAM+PD+WYD NGVWTGSAT L + L MLY GSTN SVQVQ LA P D +DPLL
Sbjct: 5 WFYLDLAMIPDRWYDINGVWTGSATFLANETLVMLYTGSTNESVQVQNLAFPEDPSDPLL 184
Query: 1643 TNWTKYEGNPVLYPPPGIGPKDFRDPTTVWI 1551
W K E NPVL PP IG KDFRDP+T WI
Sbjct: 185 RKWVKSEANPVLVPPKEIGTKDFRDPSTGWI 277
Score = 135 bits (290), Expect(4) = 4e-081
Identities = 50/79 (63%), Positives = 63/79 (79%)
Frame = -1 / +2
Query: 1298 VLHVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTFYDPAK 1119
V HV+KAS DDD++DYYA+G YD + P D DVG+GLR D+GK+YASK+FYDP K
Sbjct: 488 VKHVLKASFDDDKNDYYAIGTYDLEKQRFVPDDPALDVGLGLRIDYGKYYASKSFYDPLK 667
Query: 1118 RRRVLWGWVGETDSERADV 1062
+RR+LWGWVGETDSE+ D+
Sbjct: 668 QRRILWGWVGETDSEQNDL 724
Score = 79.0 bits (166), Expect(3) = 3e-027
Identities = 40/91 (43%), Positives = 53/91 (58%)
Frame = +3 / -2
Query: 1551 DPDRGGVAEVLGPDARGRVQHRVALVLGPVGEQRVGVVGGHGQALHLDGGVGGAPVEHCE 1730
DP R + E+LGPD GR + ++L L P ++RVG V Q L L+G V G+ VEH +
Sbjct: 277 DPARTRIPEILGPDLLGRD*NGISLRLHPFPQKRVGWVLRKCQVLDLNGFVRGSRVEHDQ 98
Query: 1731 AAVGERGGGPRPHAVGVVPLVGHHGQREAAP 1823
V + RP AV VVP VG+HGQ + P
Sbjct: 97 GFVCQERSRTRPDAVDVVPAVGNHGQVKVEP 5
Score = 50.1 bits (103), Expect(4) = 4e-081
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = -1 / +2
Query: 1433 LLHRVDGTGMWECIDFYPVATRG 1365
+LH V+GTGMWEC+DF+PVA G
Sbjct: 383 ILHSVNGTGMWECVDFFPVAVSG 451
Score = 47.3 bits (97), Expect(3) = 3e-027
Identities = 25/45 (55%), Positives = 27/45 (60%)
Frame = +1 / -3
Query: 1075 SESVSPTHPHSTRRRLAGS*NVLDA*NLPQS*RRPMPTSLPASIG 1209
S SVSPTHPH +GS* L+A* P S RRP PTS S G
Sbjct: 711 SLSVSPTHPHRILLCFSGS*KDLEA*YFP*SIRRPSPTSRAGSSG 577
Score = 40.9 bits (83), Expect(3) = 3e-027
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1 / -3
Query: 1363 LPRVATG*KSMHSHMPVPSTRC 1428
+P ATG KS HSHMPVP T C
Sbjct: 453 IPETATGKKSTHSHMPVPLTEC 388
Score = 25.4 bits (49), Expect(4) = 4e-081
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / +2
Query: 1541 DGAWRVVIGSK 1509
DG WR+ IGSK
Sbjct: 284 DGIWRIAIGSK 316
>gb|DR097982.1|DR097982 STRR1_38_G11.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_38_G11_A033 3', mRNA sequence
Length = 814
Score = 224 bits (484), Expect(5) = 2e-080
Identities = 85/150 (56%), Positives = 112/150 (74%)
Frame = -1 / -1
Query: 1313 AVAGDVLHVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTF 1134
A+ V HV+KAS DDD+HDYYA+G Y+A + + P D DVG+GLRYD+GK+YASK+F
Sbjct: 583 AIGVGVKHVLKASFDDDKHDYYAVGTYNATSQKFIPDDPEMDVGLGLRYDYGKYYASKSF 404
Query: 1133 YDPAKRRRVLWGWVGETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLR 954
YDP K RR+LWGWVGETDSE+AD+ KGWASLQ IPR + D KT +N++QWP+EE++ LR
Sbjct: 403 YDPVKERRILWGWVGETDSEQADLRKGWASLQTIPRHIWFDNKTKTNIIQWPIEEIDELR 224
Query: 953 TNSTDLSGITIDYGSVFPLNLRRATQLDIE 864
+ + + + + GSV +N A QLDIE
Sbjct: 223 SGALVVENVLLQPGSVVKVNTTEAAQLDIE 134
Score = 51.9 bits (107), Expect(5) = 2e-080
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -1 / -1
Query: 806 YNCSTSGGAAGRGALGPFGLFVLA 735
YNCSTSG AAGRG LGPFGL V+A
Sbjct: 73 YNCSTSGRAAGRGVLGPFGLLVIA 2
Score = 48.7 bits (100), Expect(5) = 2e-080
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = -1 / -1
Query: 1433 LLHRVDGTGMWECIDFYPVATRG 1365
+LH V+ TGMWEC+DFYPVA G
Sbjct: 673 ILHSVNDTGMWECVDFYPVAASG 605
Score = 27.6 bits (54), Expect(5) = 2e-080
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 1541 DGAWRVVIGSK 1509
DGAWR+ IGSK
Sbjct: 772 DGAWRITIGSK 740
Score = 24.0 bits (46), Expect(5) = 2e-080
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -1
Query: 1577 FRDPTTVWI 1551
FRDPTT WI
Sbjct: 805 FRDPTTGWI 779
>gb|CX650195.1|CX650195 COLD1_44_D01.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_44_D01_A029 3', mRNA sequence
Length = 847
Score = 257 bits (555), Expect(4) = 3e-080
Identities = 102/200 (51%), Positives = 134/200 (67%)
Frame = -1 / -2
Query: 1298 VLHVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTFYDPAK 1119
V HV+KAS DDD++DYYA+G YD + P D DVG+GLR D+GK+YASK+FYDP K
Sbjct: 600 VKHVLKASFDDDKNDYYAIGTYDLEKQRFVPDDPALDVGLGLRIDYGKYYASKSFYDPLK 421
Query: 1118 RRRVLWGWVGETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTD 939
+RR+LWGWVGETDSE+ D+ KGWASLQ +PR V D KT +N++QWP+EE++ LR+
Sbjct: 420 QRRILWGWVGETDSEQNDLKKGWASLQTVPRAVWFDDKTKTNIIQWPIEEIDELRSVELV 241
Query: 938 LSGITIDYGSVFPLNLRRATQLDIEAEFQLDRRAVMSLNEADVGYNCSTSGGAAGRGALG 759
+ + GSV + QLDIE F+ A + E + Y+CS GGAAGRG LG
Sbjct: 240 VENELLRPGSVVEVGATDGAQLDIELAFEFPDAAAIEAVEGESVYSCSNGGGAAGRGRLG 61
Query: 758 PFGLFVLADRRLRREQTAVY 699
PFGL VLA++ L + +
Sbjct: 60 PFGLLVLAEKNLTEQTAVYF 1
Score = 50.1 bits (103), Expect(4) = 3e-080
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = -1 / -2
Query: 1433 LLHRVDGTGMWECIDFYPVATRG 1365
+LH V+GTGMWEC+DF+PVA G
Sbjct: 705 ILHSVNGTGMWECVDFFPVAVSG 637
Score = 25.8 bits (50), Expect(4) = 3e-080
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 1583 KDFRDPTTVWI 1551
+DFRDP+T WI
Sbjct: 843 RDFRDPSTGWI 811
Score = 25.4 bits (49), Expect(4) = 3e-080
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / -2
Query: 1541 DGAWRVVIGSK 1509
DG WR+ IGSK
Sbjct: 804 DGIWRIAIGSK 772
>gb|DR690484.1|DR690484 EST1080570 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACV62 3' end, mRNA sequence
Length = 884
Score = 139 bits (298), Expect(4) = 2e-074
Identities = 54/105 (51%), Positives = 69/105 (65%)
Frame = -1 / +2
Query: 1865 HVIKGHAVSRDLIRWRRLPLAMVPDQWYDTNGVWTGSATTLPDGRLAMLYRGSTNASVQV 1686
+++ GH VS+DLI WR L A+VP +WYD G W+GSAT LP + A+LY G N+S Q+
Sbjct: 101 NIVWGHVVSKDLIHWRSLDPAIVPSEWYDIKGCWSGSATLLPGDKPAILYTGWANSSKQL 280
Query: 1685 QCLAVPADDADPLLTNWTKYEGNPVLYPPPGIGPKDFRDPTTVWI 1551
Q + VP D +DPLL W K NP+L P GI FRDPTT W+
Sbjct: 281 QSMVVPKDASDPLLREWVKIPQNPLLVPKFGINGSSFRDPTTGWL 415
Score = 116 bits (249), Expect(4) = 2e-074
Identities = 43/89 (48%), Positives = 62/89 (69%)
Frame = -1 / +2
Query: 1313 AVAGDVLHVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTF 1134
A+ + HV+K S+DD +++YY +G Y ++ + P + D GLRYD+GKFYASKTF
Sbjct: 614 AIGHSLKHVLKVSLDDYKYEYYTVGTYLRDSDRYVPDNTSSDDENGLRYDYGKFYASKTF 793
Query: 1133 YDPAKRRRVLWGWVGETDSERADVSKGWA 1047
+D K+RR+LWGW+ E+DS D SKGW+
Sbjct: 794 FDQNKQRRILWGWINESDSVSDDQSKGWS 880
Score = 57.0 bits (118), Expect(4) = 2e-074
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = -1 / +2
Query: 1496 HAGIAVVYRTTDLVHFELLPGLLHRVDGTGMWECIDFYPVATRG 1365
H G+A++YR+ D VH+ LH TGMWEC DFYPV G
Sbjct: 461 HRGVALLYRSKDFVHWVKAKHPLHSSKFTGMWECPDFYPVPLSG 592
Score = 25.4 bits (49), Expect(4) = 2e-074
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1 / +2
Query: 1541 DGAWRVVIGSK 1509
DG WR+V+G+K
Sbjct: 422 DGKWRIVVGNK 454
>gb|DR093703.1|DR093703 STRR1_9_H08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_9_H08_A033 5', mRNA sequence
Length = 801
Score = 226 bits (489), Expect(4) = 2e-074
Identities = 90/175 (51%), Positives = 118/175 (67%)
Frame = -1 / +3
Query: 1298 VLHVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTFYDPAK 1119
V HV+KAS DDD++DYYA+G YD + P D DVG+GLR D+GK+YASK+FYDP K
Sbjct: 276 VKHVLKASFDDDKNDYYAIGTYDLEKQRFVPDDPALDVGLGLRIDYGKYYASKSFYDPLK 455
Query: 1118 RRRVLWGWVGETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTD 939
+RR+LWGWVGETDSE+ D+ KGWASLQ +PR V D KT +N++QWP+EE++ LR+
Sbjct: 456 QRRILWGWVGETDSEQNDLRKGWASLQTVPRAVWFDDKTKTNIIQWPIEEIDELRSVELV 635
Query: 938 LSGITIDYGSVFPLNLRRATQLDIEAEFQLDRRAVMSLNEADVGYNCSTSGGAAG 774
+ + GSV + QLDIE F+ A + E + Y+CS GGAAG
Sbjct: 636 VENELLRPGSVVEVGATDGAQLDIELAFEFPDAAAIEAVEGESVYSCSNGGGAAG 800
Score = 50.1 bits (103), Expect(4) = 2e-074
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = -1 / +3
Query: 1433 LLHRVDGTGMWECIDFYPVATRG 1365
+LH V+GTGMWEC+DF+PVA G
Sbjct: 171 ILHSVNGTGMWECVDFFPVAVSG 239
Score = 36.3 bits (73), Expect(4) = 2e-074
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +3
Query: 1604 PPPGIGPKDFRDPTTVWI 1551
PP IG KDFRDP+T WI
Sbjct: 12 PPKEIGTKDFRDPSTGWI 65
Score = 25.4 bits (49), Expect(4) = 2e-074
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / +3
Query: 1541 DGAWRVVIGSK 1509
DG WR+ IGSK
Sbjct: 72 DGIWRIAIGSK 104
>gb|DR385575.1|DR385575 RTHG1_9_B08.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_9_B08_A029 5', mRNA sequence
Length = 834
Score = 187 bits (402), Expect(4) = 2e-073
Identities = 77/157 (49%), Positives = 100/157 (63%)
Frame = -1 / +1
Query: 1313 AVAGDVLHVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTF 1134
AV + HV+K S+DD +++YY +G Y + + P + D GLRYD+GKFYASKTF
Sbjct: 361 AVGSSLKHVLKVSLDDYKYEYYTVGTYLRDMDRYVPDNTSSDDENGLRYDYGKFYASKTF 540
Query: 1133 YDPAKRRRVLWGWVGETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLR 954
+D K RR+LWGW+ E+DS DVSKGWA LQ +PRT+ LD+ T S LLQWPV EVE+LR
Sbjct: 541 FDQYKNRRILWGWINESDSVADDVSKGWAGLQAVPRTIWLDSVTRSQLLQWPVPEVESLR 720
Query: 953 TNSTDLSGITIDYGSVFPLNLRRATQLDIEAEFQLDR 843
I + GSV + A Q+D+E F L R
Sbjct: 721 RKEIYKQSIDLSSGSVVEIAGLNAAQVDVEVSFDLPR 831
Score = 67.0 bits (140), Expect(4) = 2e-073
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = -1 / +1
Query: 1712 GSTNASVQVQCLAVPADDADPLLTNWTKYEGNPVLYPPPGIGPKDFRDPTTVWI 1551
G N+S Q+Q + VP D DPLL W + NP+L P GI +FRDPTT W+
Sbjct: 1 GWANSSQQMQSMVVPKDATDPLLREWVRIPQNPLLIPEFGINGSEFRDPTTGWL 162
Score = 55.6 bits (115), Expect(4) = 2e-073
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = -1 / +1
Query: 1496 HAGIAVVYRTTDLVHFELLPGLLHRVDGTGMWECIDFYPVATRGR 1362
H G+A++YR+ D VH+ LH TGMWEC DFYP G+
Sbjct: 208 HRGVALLYRSKDFVHWVKAKHPLHSSKLTGMWECPDFYPAPLSGK 342
Score = 25.4 bits (49), Expect(4) = 2e-073
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1 / +1
Query: 1541 DGAWRVVIGSK 1509
DG WR+V+G+K
Sbjct: 169 DGKWRIVVGNK 201
>gb|CO369494.1|CO369494 RTK1_47_C06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_47_C06_A029 5', mRNA sequence
Length = 818
Score = 168 bits (362), Expect(4) = 2e-073
Identities = 68/101 (67%), Positives = 75/101 (74%)
Frame = -1 / +2
Query: 1853 GHAVSRDLIRWRRLPLAMVPDQWYDTNGVWTGSATTLPDGRLAMLYRGSTNASVQVQCLA 1674
GHAVS+DL+ W L LAM+PD+WYD NGVWTGSAT L + L MLY GSTN SVQVQ LA
Sbjct: 134 GHAVSKDLVHWFYLDLAMIPDRWYDINGVWTGSATFLANETLVMLYTGSTNESVQVQNLA 313
Query: 1673 VPADDADPLLTNWTKYEGNPVLYPPPGIGPKDFRDPTTVWI 1551
P D +DPLL W K E NPVL PP IG KDFRDP+T WI
Sbjct: 314 FPEDPSDPLLRKWVKSEANPVLVPPKEIGTKDFRDPSTGWI 436
Score = 90.9 bits (192), Expect(4) = 2e-073
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = -1 / +2
Query: 1298 VLHVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTFYD 1128
V HV+KAS DDD++DYYA+G YD + P D DVG+GLR D+GK+YASK+FYD
Sbjct: 647 VKHVLKASFDDDKNDYYAIGTYDLEKQRFVPDDPALDVGLGLRIDYGKYYASKSFYD 817
Score = 87.2 bits (184), Expect(3) = 2e-023
Identities = 44/105 (41%), Positives = 59/105 (56%)
Frame = +3 / -2
Query: 1551 DPDRGGVAEVLGPDARGRVQHRVALVLGPVGEQRVGVVGGHGQALHLDGGVGGAPVEHCE 1730
DP R + E+LGPD GR + ++L L P ++RVG V Q L L+G V G+ VEH +
Sbjct: 436 DPARTRIPEILGPDLLGRD*NGISLRLHPFPQKRVGWVLRKCQVLDLNGFVRGSRVEHDQ 257
Query: 1731 AAVGERGGGPRPHAVGVVPLVGHHGQREAAPADQVAGHGVALDYM 1865
V + RP AV VVP VG+HGQ + P Q+ H V Y+
Sbjct: 256 GFVCQERSRTRPDAVDVVPAVGNHGQVKVEPVHQILRHSVTPCYV 122
Score = 50.1 bits (103), Expect(4) = 2e-073
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = -1 / +2
Query: 1433 LLHRVDGTGMWECIDFYPVATRG 1365
+LH V+GTGMWEC+DF+PVA G
Sbjct: 542 ILHSVNGTGMWECVDFFPVAVSG 610
Score = 40.9 bits (83), Expect(3) = 2e-023
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1 / -3
Query: 1363 LPRVATG*KSMHSHMPVPSTRC 1428
+P ATG KS HSHMPVP T C
Sbjct: 612 IPETATGKKSTHSHMPVPLTEC 547
Score = 26.3 bits (51), Expect(3) = 2e-023
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +1 / -3
Query: 1129 S*NVLDA*NLPQS*RRPMPTSLPASIG 1209
S* L+A* P S RRP PTS S G
Sbjct: 816 S*KDLEA*YFP*SIRRPSPTSRAGSSG 736
Score = 25.4 bits (49), Expect(4) = 2e-073
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / +2
Query: 1541 DGAWRVVIGSK 1509
DG WR+ IGSK
Sbjct: 443 DGIWRIAIGSK 475
>gb|CF478060.1|CF478060 RTWW3_17_H12.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_17_H12_A022 5', mRNA sequence
Length = 665
Score = 241 bits (520), Expect(2) = 1e-072
Identities = 95/192 (49%), Positives = 127/192 (66%)
Frame = -1 / +3
Query: 1271 DDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTFYDPAKRRRVLWGWV 1092
DDD++DYYA+G YD + P D DVG+GLR D+GK+YASK+FYDP K+RR+LWGWV
Sbjct: 3 DDDKNDYYAIGTYDLEKQRFVPDDPALDVGLGLRIDYGKYYASKSFYDPLKQRRILWGWV 182
Query: 1091 GETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTDLSGITIDYG 912
GETDSE+ D+ KGWASLQ +PR V D KT +N++QWP+EE++ LR+ + + G
Sbjct: 183 GETDSEQNDLRKGWASLQTVPRAVWFDDKTKTNIIQWPIEEIDELRSVELVVENELLRPG 362
Query: 911 SVFPLNLRRATQLDIEAEFQLDRRAVMSLNEADVGYNCSTSGGAAGRGALGPFGLFVLAD 732
SV + QLDIE F+ A + E + Y+CS GGAAG G LGPFGL VLA+
Sbjct: 363 SVVEVGATDGAQLDIELAFEFPDAAAIEAVEGESVYSCSNGGGAAGIGRLGPFGLLVLAE 542
Query: 731 RRLRREQTAVYF 696
+ L + ++
Sbjct: 543 KNLTEQTAVYFY 578
Score = 54.2 bits (112), Expect(2) = 1e-072
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -1 / +3
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIV 612
EQTAVYFYVAK D L T C DE+RSS A++++
Sbjct: 555 EQTAVYFYVAKSADSQLQTFLCHDETRSSLASELI 659
>gb|DR094404.1|DR094404 STRR1_14_H05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_14_H05_A033 3', mRNA sequence
Length = 793
Score = 150 bits (322), Expect(3) = 1e-068
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -1 / -3
Query: 1157 KFYASKTFYDPAKRRRVLWGWVGETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWP 978
K+YASK+FYDP K RR+LWGWVGETDSE+AD+ KGWASLQ IPR + D KT +N++QWP
Sbjct: 791 KYYASKSFYDPVKERRILWGWVGETDSEQADLRKGWASLQTIPRHIWFDNKTKTNIIQWP 612
Query: 977 VEEVETLRTNSTDLSGITIDYGSVFPLNLRRATQLDIE 864
+EE++ LR+ + + + + GSV +N A QLDIE
Sbjct: 611 IEEIDELRSGALVVENVLLQPGSVVKVNTTEAAQLDIE 498
Score = 79.0 bits (166), Expect(3) = 1e-068
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1 / -3
Query: 566 TLSLRVLVDHSIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
++S+R LVDHSIVES+AQGGR TSRVYPT+A+ A +FLFNNAT A
Sbjct: 203 SISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTA 57
Score = 78.0 bits (164), Expect(3) = 1e-068
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -1 / -3
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEA 567
EQTAVYFYV K DG L T FC DESRSS ATD++ V GS+VPVL +E+
Sbjct: 350 EQTAVYFYVVKSADGKLQTFFCHDESRSSLATDLILGVHGSSVPVLANES 201
Score = 52.4 bits (108), Expect(3) = 9e-022
Identities = 26/105 (24%), Positives = 47/105 (44%)
Frame = +3 / +3
Query: 837 GAAVQLELRLDVQLGGAAEVEREHXXXXXXXXXXXXXXXXQRLHLLHGPLKQVAARLGVQ 1016
G + L++QL ++ + Q ++ GPL + RL ++
Sbjct: 471 GVLREFNNELNIQLSSLGCIDFHNRARLEQHILDDKRTRSQFVNFFDGPLDNIGLRLVIK 650
Query: 1017 EHRPGDTLQRRPSLGHVRALRVCLADPSPQHAAALGRVVERLGRV 1151
+ P + LQR PS + L V PSP++++ L +V+RLG +
Sbjct: 651 PNMPRNRLQRSPSFSKIGLLAVSFPYPSPKNSSLLHWIVKRLGSI 785
Score = 50.1 bits (103), Expect(3) = 9e-022
Identities = 25/41 (60%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 595 LPTTRLTMSVALEERDSSWQKCVAREPSRPLAT*K*TAVCS 717
LP T SVA E+ DSSWQK V PS T*K*TAVCS
Sbjct: 229 LPWTPRMRSVAREDLDSSWQKKVCNLPSADFTT*K*TAVCS 351
Score = 40.0 bits (81), Expect(3) = 9e-022
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = +1 / +1
Query: 421 AAVALLKRKTPALA*MASVG*TRDVAVDLPPCAKLSTMEW 540
A VALL R + A A VG*T +V LPP A LST+EW
Sbjct: 58 AVVALLNRNSLAAPSRACVG*TLEVMHRLPP*A*LSTIEW 177
>gb|CF403042.1|CF403042 RTWW1_24_A01.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_24_A01_A015 5', mRNA sequence
Length = 624
Score = 224 bits (484), Expect(3) = 4e-067
Identities = 85/150 (56%), Positives = 112/150 (74%)
Frame = -1 / +3
Query: 1313 AVAGDVLHVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTF 1134
A+ V HV+KAS DDD+HDYYA+G Y+A + + P D DVG+GLRYD+GK+YASK+F
Sbjct: 90 AIGVGVKHVLKASFDDDKHDYYAVGTYNATSQKFIPDDPEMDVGLGLRYDYGKYYASKSF 269
Query: 1133 YDPAKRRRVLWGWVGETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLR 954
YDP K RR+LWGWVGETDSE+AD+ KGWASLQ IPR + D KT +N++QWP+EE++ LR
Sbjct: 270 YDPVKERRILWGWVGETDSEQADLRKGWASLQTIPRHIWFDNKTKTNIIQWPIEEIDELR 449
Query: 953 TNSTDLSGITIDYGSVFPLNLRRATQLDIE 864
+ + + + + GSV +N A QLDIE
Sbjct: 450 SGALVVENVLLQPGSVVKVNTTEAAQLDIE 539
Score = 46.9 bits (96), Expect(3) = 4e-067
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -1 / +3
Query: 1430 LHRVDGTGMWECIDFYPVATRG 1365
LH V+ TGMWEC+DFYPVA G
Sbjct: 3 LHFVNDTGMWECVDFYPVAASG 68
Score = 24.4 bits (47), Expect(3) = 4e-067
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / +3
Query: 806 YNCSTSGG 783
YNCSTSGG
Sbjct: 600 YNCSTSGG 623
>gb|CO198745.1|CO198745 GEO1_16_E03.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_16_E03_A029 3', mRNA sequence
Length = 724
Score = 177 bits (380), Expect(3) = 4e-067
Identities = 67/115 (58%), Positives = 87/115 (75%)
Frame = -1 / -2
Query: 1208 PIDAGRDVGIGLRYDWGKFYASKTFYDPAKRRRVLWGWVGETDSERADVSKGWASLQGIP 1029
P D DVG+GLRYD+GK+YASK+FYDP K RR+LWGWVGETDSE+AD+ KGWASLQ IP
Sbjct: 720 PDDPEIDVGLGLRYDYGKYYASKSFYDPVKERRILWGWVGETDSEQADLRKGWASLQTIP 541
Query: 1028 RTVLLDTKTGSNLLQWPVEEVETLRTNSTDLSGITIDYGSVFPLNLRRATQLDIE 864
R + D KT +N++QWP+EE++ LR+ + + + + GSV +N A QLDIE
Sbjct: 540 RHIWFDNKTKTNIIQWPIEEIDELRSGALVVENVLLQPGSVVKVNTTEAAQLDIE 376
Score = 78.0 bits (164), Expect(3) = 4e-067
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -1 / -2
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEA 567
EQTAVYFYV K DG L T FC DESRSS ATD++ V GS+VPVL +E+
Sbjct: 228 EQTAVYFYVVKSADGKLQTFFCHDESRSSLATDLILGVHGSSVPVLANES 79
Score = 76.7 bits (161), Expect(3) = 4e-022
Identities = 42/86 (48%), Positives = 48/86 (55%)
Frame = +1 / +2
Query: 955 RSVSTSSTGH*SRLLPVLVSRSTVRGIPCSDAHPLDTSARSESVSPTHPHSTRRRLAGS* 1134
RS S SS GH L+ VL+S GI C +AHP SA S SVSPTHP GS*
Sbjct: 467 RSSSISSMGHWIILVFVLLSNQICLGIVCKEAHPFLRSACSLSVSPTHPQRILLSFTGS* 646
Query: 1135 NVLDA*NLPQS*RRPMPTSLPASIGV 1212
L+A* P S R P PTS+ S G+
Sbjct: 647 KDLEA*YFP*SYRSPSPTSISGSSGI 724
Score = 50.1 bits (103), Expect(3) = 4e-022
Identities = 25/41 (60%), Positives = 26/41 (63%)
Frame = +1 / +2
Query: 595 LPTTRLTMSVALEERDSSWQKCVAREPSRPLAT*K*TAVCS 717
LP T SVA E+ DSSWQK V PS T*K*TAVCS
Sbjct: 107 LPWTPRMRSVAREDLDSSWQKKVCNLPSADFTT*K*TAVCS 229
Score = 46.9 bits (96), Expect(3) = 4e-067
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -1 / -2
Query: 566 TLSLRVLVDHSIVESFAQGGRSTATSR 486
++S+R LVDHSIVES+AQGGR TSR
Sbjct: 81 SISVRTLVDHSIVESYAQGGRRCITSR 1
Score = 23.1 bits (44), Expect(3) = 4e-022
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / +2
Query: 505 LPPCAKLSTMEW 540
LPP A LST+EW
Sbjct: 20 LPP*A*LSTIEW 55
>gb|CO364064.1|CO364064 RTK1_13_A12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_13_A12_A029 5', mRNA sequence
Length = 844
Score = 146 bits (314), Expect(2) = 5e-066
Identities = 62/99 (62%), Positives = 76/99 (76%)
Frame = -1 / +2
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEATLSLRVLVDH 537
EQTAVYFYVAK DG L T C DE+RSS A++++ + GS+ PVL DE ++S+R LVDH
Sbjct: 353 EQTAVYFYVAKSADGQLQTFLCHDETRSSLASELILGIHGSSFPVLADEKSISVRTLVDH 532
Query: 536 SIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
SIVES+AQGGR TSRVYPT ++ A +FLFNNATAA
Sbjct: 533 SIVESYAQGGRRCITSRVYPTRSLNGAAKLFLFNNATAA 649
Score = 126 bits (270), Expect(2) = 5e-066
Identities = 52/121 (42%), Positives = 73/121 (60%)
Frame = -1 / +2
Query: 1058 KGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTDLSGITIDYGSVFPLNLRRAT 879
KGWASLQ +PR V D KT +N++QWP+EE++ LR+ + + GSV +
Sbjct: 14 KGWASLQTVPRAVWFDDKTKTNIIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDGA 193
Query: 878 QLDIEAEFQLDRRAVMSLNEADVGYNCSTSGGAAGRGALGPFGLFVLADRRLRREQTAVY 699
QLDIE F+ A + + E + Y+CS GGAAGRG LGPFGL VLA++ L + +
Sbjct: 194 QLDIELAFEFPDAAAIEVVEGESVYSCSNGGGAAGRGRLGPFGLLVLAEKNLTEQTAVYF 373
Query: 698 F 696
+
Sbjct: 374 Y 376
>gb|DR014430.1|DR014430 HEAT1_49_A07.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_49_A07_A029 5', mRNA sequence
Length = 914
Score = 133 bits (285), Expect(3) = 6e-066
Identities = 51/104 (49%), Positives = 65/104 (62%)
Frame = -1 / +1
Query: 1862 VIKGHAVSRDLIRWRRLPLAMVPDQWYDTNGVWTGSATTLPDGRLAMLYRGSTNASVQVQ 1683
++ GH VS+DLI W L A+VP +WYD G W+GSAT LP + +LY G N+S Q+Q
Sbjct: 163 IVWGHVVSKDLINWHSLDTAIVPSEWYDIKGCWSGSATLLPGDKPVVLYTGWANSSQQLQ 342
Query: 1682 CLAVPADDADPLLTNWTKYEGNPVLYPPPGIGPKDFRDPTTVWI 1551
+ VP D DPLL W K NP+L P GI FRDP+T W+
Sbjct: 343 SMVVPKDATDPLLREWVKIPQNPLLIPEFGINGSSFRDPSTGWL 474
Score = 106 bits (227), Expect(3) = 6e-066
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = -1 / +1
Query: 1313 AVAGDVLHVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTF 1134
A+ + HV+K S+DD ++DYY +G Y + + P + D GLRYD+GKFYASKTF
Sbjct: 673 AIGQSLKHVLKVSLDDYKYDYYTVGTYLRDMDRYVPDNTSSDDEXGLRYDYGKFYASKTF 852
Query: 1133 YDPAKRRRVLWGWVGETDS 1077
+D K+RR+LWGW+ E+DS
Sbjct: 853 FDQNKQRRILWGWINESDS 909
Score = 51.5 bits (106), Expect(3) = 6e-066
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = -1 / +1
Query: 1490 GIAVVYRTTDLVHFELLPGLLHRVDGTGMWECIDFYPVATRG 1365
G+A+++++ D VH+ LH + TGMWEC DFYPV G
Sbjct: 526 GVALLFKSKDFVHWVKAKHPLHSSELTGMWECPDFYPVPLSG 651
>gb|DR023520.1|DR023520 STRS1_58_E09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_58_E09_A034 3', mRNA sequence
Length = 876
Score = 146 bits (314), Expect(2) = 3e-058
Identities = 62/99 (62%), Positives = 76/99 (76%)
Frame = -1 / +1
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEATLSLRVLVDH 537
EQTAVYFYVAK DG L T C DE+RSS A++++ + GS+ PVL DE ++S+R LVDH
Sbjct: 307 EQTAVYFYVAKSTDGQLQTFLCHDETRSSLASELILGIHGSSFPVLADEKSISVRTLVDH 486
Query: 536 SIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
SIVES+AQGGR TSRVYPT ++ A +FLFNNATAA
Sbjct: 487 SIVESYAQGGRRCITSRVYPTRSLNGAAKLFLFNNATAA 603
Score = 100 bits (213), Expect(2) = 3e-058
Identities = 42/109 (38%), Positives = 62/109 (56%)
Frame = -1 / +1
Query: 1022 VLLDTKTGSNLLQWPVEEVETLRTNSTDLSGITIDYGSVFPLNLRRATQLDIEAEFQLDR 843
V D KT +N++QWP+EE++ LR+ + + GSV + QLDIE F+
Sbjct: 4 VWFDDKTKTNIIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDGAQLDIELAFEFPD 183
Query: 842 RAVMSLNEADVGYNCSTSGGAAGRGALGPFGLFVLADRRLRREQTAVYF 696
A + E + Y+CS GGA+GRG LGPFGL VLA++ L + ++
Sbjct: 184 AAAIEAVEGESVYSCSNGGGASGRGRLGPFGLLVLAEKNLTEQTAVYFY 330
>gb|DR093023.1|DR093023 STRR1_5_C02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_C02_A033 5', mRNA sequence
Length = 905
Score = 157 bits (338), Expect(2) = 1e-057
Identities = 64/149 (42%), Positives = 92/149 (61%)
Frame = -1 / +1
Query: 1292 HVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTFYDPAKRR 1113
HV+K S+DD + DYY +G Y + + P + + GLRYD+GKFYASKTF+DP K R
Sbjct: 13 HVLKNSLDDTKVDYYTVGHYLPHLDKYVPENGSVEGPNGLRYDYGKFYASKTFFDPRKSR 192
Query: 1112 RVLWGWVGETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTDLS 933
R+LWGW+ E+DS D++K WASLQ IPR V LD T +L QWPV E+E+LR +
Sbjct: 193 RILWGWINESDSVADDLNKQWASLQAIPRVVRLDPLTRRSLFQWPVPELESLRAYNVRKD 372
Query: 932 GITIDYGSVFPLNLRRATQLDIEAEFQLD 846
+ ++ SV + + ++ E + +
Sbjct: 373 HVVLERESVMKVEGFNSGAAQVDVEVEFE 459
Score = 91.8 bits (194), Expect(2) = 1e-057
Identities = 41/73 (56%), Positives = 51/73 (69%)
Frame = -1 / +1
Query: 653 CQDESRSSSATDIVKRVVGSAVPVLEDEATLSLRVLVDHSIVESFAQGGRSTATSRVYPT 474
C D+SRS+ D+ K G V V + +LSLRVLVDHSIVESFA+GGR+ TSR YPT
Sbjct: 658 CVDQSRSTLQVDVDKTSYGGFVSVKPHQRSLSLRVLVDHSIVESFAEGGRTCITSRSYPT 837
Query: 473 EAIYANAGVFLFN 435
A+ NA +F+FN
Sbjct: 838 LAVNENAHLFVFN 876
>gb|DR018248.1|DR018248 STRS1_21_B10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_21_B10_A034 5', mRNA sequence
Length = 684
Score = 105 bits (224), Expect(4) = 6e-057
Identities = 40/83 (48%), Positives = 55/83 (66%)
Frame = -1 / +3
Query: 1313 AVAGDVLHVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTF 1134
AV + HV+K S+DD +++YY +G Y + + P + D GLRYD+GKFYASKTF
Sbjct: 435 AVGSSLKHVLKVSLDDYKYEYYTVGTYLRDMDRYVPDNTSSDDENGLRYDYGKFYASKTF 614
Query: 1133 YDPAKRRRVLWGWVGETDSERAD 1065
+D K RR+LWGW+ E+DS D
Sbjct: 615 FDQYKNRRILWGWINESDSVADD 683
Score = 93.2 bits (197), Expect(4) = 6e-057
Identities = 37/78 (47%), Positives = 47/78 (60%)
Frame = -1 / +3
Query: 1784 YDTNGVWTGSATTLPDGRLAMLYRGSTNASVQVQCLAVPADDADPLLTNWTKYEGNPVLY 1605
YD G W+GSAT L + +LY G N+S Q+Q + VP D DPLL W + NP+L
Sbjct: 3 YDIKGCWSGSATLLRGDKPVILYTGWANSSQQMQSMVVPKDATDPLLREWVRIPQNPLLI 182
Query: 1604 PPPGIGPKDFRDPTTVWI 1551
P GI +FRDPTT W+
Sbjct: 183 PEFGINGSEFRDPTTGWL 236
Score = 55.6 bits (115), Expect(4) = 6e-057
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = -1 / +3
Query: 1496 HAGIAVVYRTTDLVHFELLPGLLHRVDGTGMWECIDFYPVATRGR 1362
H G+A++YR+ D VH+ LH TGMWEC DFYP G+
Sbjct: 282 HRGVALLYRSKDFVHWVKAKHPLHSSKLTGMWECPDFYPAPLSGK 416
Score = 25.4 bits (49), Expect(4) = 6e-057
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1 / +3
Query: 1541 DGAWRVVIGSK 1509
DG WR+V+G+K
Sbjct: 243 DGKWRIVVGNK 275
>gb|CF400266.1|CF400266 RTWW1_4_E08.b1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_4_E08_A015 3', mRNA sequence
Length = 695
Score = 100 bits (214), Expect(4) = 1e-056
Identities = 38/63 (60%), Positives = 48/63 (76%)
Frame = -1 / -2
Query: 1298 VLHVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTFYDPAK 1119
V HV+KAS DDD++DYYA+G YD + P D DVG+GLR D+GK+YASK+FYDP K
Sbjct: 517 VKHVLKASFDDDKNDYYAIGTYDLEKQRFVPDDPALDVGLGLRIDYGKYYASKSFYDPLK 338
Query: 1118 RRR 1110
+RR
Sbjct: 337 QRR 329
Score = 98.2 bits (208), Expect(4) = 1e-056
Identities = 34/56 (60%), Positives = 45/56 (80%)
Frame = -1 / -3
Query: 1118 RRRVLWGWVGETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRT 951
R +LWGWVGETDSE+ D+ KGWASLQ +PR V D KT +N++QWP+EE++ LR+
Sbjct: 336 REEILWGWVGETDSEQNDLRKGWASLQTVPRAVWFDDKTKTNIIQWPIEEIDELRS 169
Score = 50.1 bits (103), Expect(4) = 1e-056
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = -1 / -2
Query: 1433 LLHRVDGTGMWECIDFYPVATRG 1365
+LH V+GTGMWEC+DF+PVA G
Sbjct: 622 ILHSVNGTGMWECVDFFPVAVSG 554
Score = 29.5 bits (58), Expect(4) = 1e-056
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / -1
Query: 878 QLDIEAEFQLDRRAVMSLNEADVGYNCSTSG 786
QLDIE F+ A + + E + Y+CS G
Sbjct: 95 QLDIELAFEFPDAAAIEVVEGESVYSCSNGG 3
>gb|CF471267.1|CF471267 RTDS1_2_E05.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_2_E05_A015 5', mRNA sequence
Length = 712
Score = 141 bits (302), Expect(3) = 2e-056
Identities = 60/99 (60%), Positives = 75/99 (75%)
Frame = -1 / +3
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEATLSLRVLVDH 537
EQTAVYFYVAK DG L T C DE+RSS A++++ + GS+ PVL DE ++S+R LVDH
Sbjct: 333 EQTAVYFYVAKSTDGQLQTFLCHDETRSSLASELILGIHGSSFPVLADEKSISVRTLVDH 512
Query: 536 SIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
SIVES+AQGGR TSRVYPT ++ A +FL +NATAA
Sbjct: 513 SIVESYAQGGRRCITSRVYPTRSLNGAAKLFLXHNATAA 629
Score = 94.5 bits (200), Expect(3) = 2e-056
Identities = 39/100 (39%), Positives = 57/100 (57%)
Frame = -1 / +3
Query: 995 NLLQWPVEEVETLRTNSTDLSGITIDYGSVFPLNLRRATQLDIEAEFQLDRRAVMSLNEA 816
N++QWP+EE++ LR+ + + GSV + QLDIE F+ A + E
Sbjct: 57 NIIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDGAQLDIELAFEFPDAAAIEAVEG 236
Query: 815 DVGYNCSTSGGAAGRGALGPFGLFVLADRRLRREQTAVYF 696
+ Y+CS GGAAGRG LGPFGL VLA++ L + ++
Sbjct: 237 ESVYSCSNGGGAAGRGRLGPFGLLVLAEKNLTEQTAVYFY 356
Score = 24.4 bits (47), Expect(3) = 2e-056
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / +1
Query: 1049 ASLQGIPRTVLLDTKT 1002
ASLQ +PR V D KT
Sbjct: 4 ASLQTVPRAVWFDDKT 51
>gb|CF386768.1|CF386768 RTDR1_16_A04.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_16_A04_A015 5', mRNA
sequence
Length = 664
Score = 109 bits (233), Expect(3) = 3e-052
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = -1 / +2
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEATLSLRVLVDH 537
EQTAVYFYVAK DG L T C DE+RSS A++++ + GS+ PVL DE ++S+R LVDH
Sbjct: 452 EQTAVYFYVAKSTDGQLQTFLCHDETRSSLASELILGIHGSSFPVLADEKSISVRTLVDH 631
Query: 536 SIVESFAQGGR 504
SIVES+AQGGR
Sbjct: 632 SIVESYAQGGR 664
Score = 68.9 bits (144), Expect(3) = 3e-052
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = -1 / +2
Query: 878 QLDIEAEFQLDRRAVMSLNEADVGYNCSTSGGAAGRGALGPFGLFVLADRRLRREQTAVY 699
QLDIE F+ A + E + Y+CS GGAAGRG LGPFGL VLA++ L + +
Sbjct: 293 QLDIELAFEFPDAAAIEAVEGESVYSCSNGGGAAGRGRLGPFGLLVLAEKNLTEQTAVYF 472
Query: 698 F 696
+
Sbjct: 473 Y 475
Score = 67.0 bits (140), Expect(3) = 3e-052
Identities = 27/68 (39%), Positives = 41/68 (60%)
Frame = -1 / +2
Query: 1076 ERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTDLSGITIDYGSVFPL 897
E+ D+ KGWASLQ +PR V D KT +N++QWP+EE++ LR+ + + GSV +
Sbjct: 2 EQNDLRKGWASLQTVPRAVWFDDKTKTNIIQWPIEEIDELRSVELVVENELLRPGSVVEV 181
Query: 896 NLRRATQL 873
Q+
Sbjct: 182 GATDGAQV 205
>gb|DR690351.1|DR690351 EST1080437 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACU06 3' end, mRNA sequence
Length = 908
Score = 151 bits (324), Expect(4) = 4e-052
Identities = 62/131 (47%), Positives = 87/131 (66%)
Frame = -1 / +2
Query: 1298 VLHVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTFYDPAK 1119
V HV+K S+D+ + DYY +G Y + + P + + GLRYD+GKFYASKTF+D K
Sbjct: 101 VKHVLKNSLDNTKVDYYTVGHYLPQLDRYLPDNGSIEGPNGLRYDYGKFYASKTFFDDNK 280
Query: 1118 RRRVLWGWVGETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTD 939
R+LWGW+ E+DS D++KGWASLQ IPR V LD T +L+QWPV E+E+LR ++
Sbjct: 281 SLRILWGWINESDSLVDDLNKGWASLQAIPRVVRLDPLTRRSLVQWPVSELESLREHNIR 460
Query: 938 LSGITIDYGSV 906
+ ++ SV
Sbjct: 461 KDHVVLERESV 493
Score = 62.0 bits (129), Expect(4) = 4e-052
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = -1 / +3
Query: 653 CQDESRSSSATDIVKRVVGSAVPVLEDEATLSLRVLVDHSIVESFAQGGR 504
C D+S S+ D+ K G V V + +LSLRVLVDHSIVESFA+GGR
Sbjct: 753 CVDQSTSTLQLDVDKTSYGGFVSVTPHQRSLSLRVLVDHSIVESFAEGGR 902
Score = 37.3 bits (75), Expect(4) = 4e-052
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -1 / +2
Query: 1427 HRVDGTGMWECIDFYPVATRG 1365
H TGMWEC DFYPV+ G
Sbjct: 2 HSARHTGMWECPDFYPVSLYG 64
Score = 21.7 bits (41), Expect(4) = 4e-052
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1 / +2
Query: 884 ATQLDIEAEFQL 849
A Q+D+E EF+L
Sbjct: 521 AAQVDVEVEFEL 556
>gb|DR023588.1|DR023588 STRS1_58_E09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_58_E09_A034 5', mRNA sequence
Length = 576
Score = 168 bits (362), Expect(3) = 9e-052
Identities = 68/101 (67%), Positives = 75/101 (74%)
Frame = -1 / +3
Query: 1853 GHAVSRDLIRWRRLPLAMVPDQWYDTNGVWTGSATTLPDGRLAMLYRGSTNASVQVQCLA 1674
GHAVS+DL+ W L LAM+PD+WYD NGVWTGSAT L + L MLY GSTN SVQVQ LA
Sbjct: 84 GHAVSKDLVHWFYLDLAMIPDRWYDINGVWTGSATFLANETLVMLYTGSTNESVQVQNLA 263
Query: 1673 VPADDADPLLTNWTKYEGNPVLYPPPGIGPKDFRDPTTVWI 1551
P D +DPLL W K E NPVL PP IG KDFRDP+T WI
Sbjct: 264 FPEDPSDPLLRKWVKSEANPVLVPPKEIGTKDFRDPSTGWI 386
Score = 87.2 bits (184), Expect(2) = 1e-022
Identities = 44/105 (41%), Positives = 59/105 (56%)
Frame = +3 / -2
Query: 1551 DPDRGGVAEVLGPDARGRVQHRVALVLGPVGEQRVGVVGGHGQALHLDGGVGGAPVEHCE 1730
DP R + E+LGPD GR + ++L L P ++RVG V Q L L+G V G+ VEH +
Sbjct: 386 DPARTRIPEILGPDLLGRD*NGISLRLHPFPQKRVGWVLRKCQVLDLNGFVRGSRVEHDQ 207
Query: 1731 AAVGERGGGPRPHAVGVVPLVGHHGQREAAPADQVAGHGVALDYM 1865
V + RP AV VVP VG+HGQ + P Q+ H V Y+
Sbjct: 206 GFVCQERSRTRPDAVDVVPAVGNHGQVKVEPVHQILRHSVTPCYV 72
Score = 50.1 bits (103), Expect(3) = 9e-052
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = -1 / +3
Query: 1433 LLHRVDGTGMWECIDFYPVATRG 1365
+LH V+GTGMWEC+DF+PVA G
Sbjct: 492 ILHSVNGTGMWECVDFFPVAVSG 560
Score = 40.9 bits (83), Expect(2) = 1e-022
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1 / -3
Query: 1363 LPRVATG*KSMHSHMPVPSTRC 1428
+P ATG KS HSHMPVP T C
Sbjct: 562 IPETATGKKSTHSHMPVPLTEC 497
Score = 25.4 bits (49), Expect(3) = 9e-052
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / +3
Query: 1541 DGAWRVVIGSK 1509
DG WR+ IGSK
Sbjct: 393 DGIWRIAIGSK 425
>gb|CO363936.1|CO363936 RTK1_12_E03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_12_E03_A029 5', mRNA sequence
Length = 818
Score = 88.6 bits (187), Expect(3) = 3e-050
Identities = 34/71 (47%), Positives = 49/71 (69%)
Frame = -1 / +2
Query: 1076 ERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTDLSGITIDYGSVFPL 897
E+AD+ KGWASLQ IPR + D KT +N++QWP+EE++ LR+ + + + + GSV +
Sbjct: 2 EQADLRKGWASLQTIPRHIWFDNKTKTNIIQWPIEEIDELRSGALVVENVLLQPGSVVKV 181
Query: 896 NLRRATQLDIE 864
N A QLDIE
Sbjct: 182 NTTEAAQLDIE 214
Score = 79.0 bits (166), Expect(3) = 3e-050
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1 / +2
Query: 566 TLSLRVLVDHSIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
++S+R LVDHSIVES+AQGGR TSRVYPT+A+ A +FLFNNAT A
Sbjct: 509 SISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTA 655
Score = 78.0 bits (164), Expect(3) = 3e-050
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -1 / +2
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEA 567
EQTAVYFYV K DG L T FC DESRSS ATD++ V GS+VPVL +E+
Sbjct: 362 EQTAVYFYVVKSADGKLQTFFCHDESRSSLATDLILGVHGSSVPVLANES 511
>gb|DR023277.1|DR023277 STRS1_56_C06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_56_C06_A034 5', mRNA sequence
Length = 811
Score = 165 bits (354), Expect(3) = 2e-049
Identities = 66/148 (44%), Positives = 91/148 (61%)
Frame = -1 / +2
Query: 1262 RHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTFYDPAKRRRVLWGWVGET 1083
+++YY +G Y ++ + P + D GLRYD+GKFYASKTF+D K+RR+LWGW+ E+
Sbjct: 26 KYEYYTVGTYLRDSDRYVPDNTSSDDENGLRYDYGKFYASKTFFDQNKQRRILWGWINES 205
Query: 1082 DSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTDLSGITIDYGSVF 903
DS D SKGW+ +Q IPRT+ LD T + LLQWPV EVE LR T + + GSV
Sbjct: 206 DSVSDDQSKGWSGVQAIPRTIWLDQATRARLLQWPVSEVEALRRKKTSKQNLHLRSGSVV 385
Query: 902 PLNLRRATQLDIEAEFQLDRRAVMSLNE 819
+ A Q+D+E F L R + +
Sbjct: 386 EIAGVNAAQVDVEVSFDLPRAKIAEFED 469
Score = 46.9 bits (96), Expect(3) = 2e-049
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = -1 / +2
Query: 572 EATLSLRVLVDHSIVESFAQGGRSTATS 489
E +LSLRVLVDHSIVESF +GG++ T+
Sbjct: 728 EKSLSLRVLVDHSIVESFGEGGKACITA 811
Score = 30.9 bits (61), Expect(3) = 2e-049
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1 / +2
Query: 785 GAAGRGALGPFGLFVLADRRLRREQTAVY 699
G+A R +GPFGL VLA + L +
Sbjct: 515 GSAARTVVGPFGLLVLASKDLNERTAVFF 601
>gb|CF671389.1|CF671389 RTCNT1_56_F07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_56_F07_A029 5', mRNA sequence
Length = 749
Score = 144 bits (308), Expect(2) = 4e-049
Identities = 61/99 (61%), Positives = 75/99 (75%)
Frame = -1 / +1
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEATLSLRVLVDH 537
EQTAVYFYVAK D L T C DE+RSS A++++ + GS+ PVL DE ++S+R LVDH
Sbjct: 217 EQTAVYFYVAKSADSQLQTFLCHDETRSSLASELILGIHGSSFPVLADEKSISVRTLVDH 396
Query: 536 SIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
SIVES+AQGGR TSRVYPT ++ A +FLFNNATAA
Sbjct: 397 SIVESYAQGGRRCITSRVYPTRSLNGAAKLFLFNNATAA 513
Score = 73.0 bits (153), Expect(2) = 4e-049
Identities = 31/73 (42%), Positives = 41/73 (56%)
Frame = -1 / +1
Query: 914 GSVFPLNLRRATQLDIEAEFQLDRRAVMSLNEADVGYNCSTSGGAAGRGALGPFGLFVLA 735
GSV + QLDIE F+ A + E + Y+CS GGAAGRG LGPFGL VLA
Sbjct: 22 GSVVEVGATDGAQLDIELAFEFPDAAAIEAVEGESVYSCSNGGGAAGRGRLGPFGLLVLA 201
Query: 734 DRRLRREQTAVYF 696
++ L + ++
Sbjct: 202 EKNLTEQTAVYFY 240
>gb|DR093619.1|DR093619 STRR1_9_H08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_9_H08_A033 3', mRNA sequence
Length = 820
Score = 146 bits (314), Expect(2) = 9e-049
Identities = 62/99 (62%), Positives = 76/99 (76%)
Frame = -1 / +2
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEATLSLRVLVDH 537
EQTAVYFYVAK DG L T C DE+RSS A++++ + GS+ PVL DE ++S+R LVDH
Sbjct: 182 EQTAVYFYVAKSTDGQLQTFLCHDETRSSLASELILGIHGSSFPVLADEKSISVRTLVDH 361
Query: 536 SIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
SIVES+AQGGR TSRVYPT ++ A +FLFNNATAA
Sbjct: 362 SIVESYAQGGRRCITSRVYPTRSLNGAAKLFLFNNATAA 478
Score = 68.9 bits (144), Expect(2) = 9e-049
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = -1 / +2
Query: 878 QLDIEAEFQLDRRAVMSLNEADVGYNCSTSGGAAGRGALGPFGLFVLADRRLRREQTAVY 699
QLDIE F+ A + E + Y+CS GGAAGRG LGPFGL VLA++ L + +
Sbjct: 23 QLDIELAFEFPDAAAIEAVEGESVYSCSNGGGAAGRGRLGPFGLLVLAEKNLTEQTAVYF 202
Query: 698 F 696
+
Sbjct: 203 Y 205
>gb|DR167118.1|DR167118 RTPHOS1_16_G01.g1_A029 Roots minus phosphorous Pinus taeda cDNA clone
RTPHOS1_16_G01_A029 5', mRNA sequence
Length = 711
Score = 81.3 bits (171), Expect(3) = 3e-047
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = -1 / +3
Query: 1058 KGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTDLSGITIDYGSVFPLNLRRAT 879
KGWASLQ IPR + D KT +N++QWP+EE++ LR+ + + + + GSV +N A
Sbjct: 12 KGWASLQTIPRHIWFDNKTKTNIIQWPIEEIDELRSGALVVENVLLQPGSVVKVNTTEAA 191
Query: 878 QLDIE 864
QLDIE
Sbjct: 192 QLDIE 206
Score = 78.0 bits (164), Expect(3) = 3e-047
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -1 / +3
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEA 567
EQTAVYFYV K DG L T FC DESRSS ATD++ V GS+VPVL +E+
Sbjct: 354 EQTAVYFYVVKSADGKLQTFFCHDESRSSLATDLILGVHGSSVPVLANES 503
Score = 75.8 bits (159), Expect(3) = 3e-047
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = -1 / +3
Query: 566 TLSLRVLVDHSIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
++S+R LVDHSIVES+AQGGR TSRVYPT+A+ A +FL NNAT A
Sbjct: 501 SISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLVNNATTA 647
>gb|CO363986.1|CO363986 RTK1_13_A12.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_13_A12_A029 3', mRNA sequence
Length = 864
Score = 146 bits (314), Expect(2) = 6e-047
Identities = 62/99 (62%), Positives = 76/99 (76%)
Frame = -1 / +3
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEATLSLRVLVDH 537
EQTAVYFYVAK DG L T C DE+RSS A++++ + GS+ PVL DE ++S+R LVDH
Sbjct: 153 EQTAVYFYVAKSADGQLQTFLCHDETRSSLASELILGIHGSSFPVLADEKSISVRTLVDH 332
Query: 536 SIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
SIVES+AQGGR TSRVYPT ++ A +FLFNNATAA
Sbjct: 333 SIVESYAQGGRRCITSRVYPTRSLNGAAKLFLFNNATAA 449
Score = 62.9 bits (131), Expect(2) = 6e-047
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = -1 / +3
Query: 869 IEAEFQLDRRAVMSLNEADVGYNCSTSGGAAGRGALGPFGLFVLADRRLRREQTAVYF 696
IE F+ A + + E + Y+CS GGAAGRG LGPFGL VLA++ L + ++
Sbjct: 3 IELAFEFPDAAAIEVVEGESVYSCSNGGGAAGRGRLGPFGLLVLAEKNLTEQTAVYFY 176
>gb|DR385496.1|DR385496 RTHG1_9_B08.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_9_B08_A029 3', mRNA sequence
Length = 819
Score = 98.7 bits (209), Expect(4) = 3e-043
Identities = 42/93 (45%), Positives = 53/93 (56%)
Frame = -1 / +2
Query: 1097 WVGETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTDLSGITID 918
W+ E+DS DVSKGW LQ +PRT+ LD+ T S LLQWPV EVE+LR I +
Sbjct: 2 WINESDSVADDVSKGWXGLQAVPRTIWLDSVTRSQLLQWPVPEVESLRRKEIYKQSIDLS 181
Query: 917 YGSVFPLNLRRATQLDIEAEFQLDRRAVMSLNE 819
GSV + A Q+D+E F L R + E
Sbjct: 182 SGSVVEIAGLNAAQVDVEVSFDLPRLEIAEFEE 280
Score = 75.3 bits (158), Expect(4) = 3e-043
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = -1 / +2
Query: 572 EATLSLRVLVDHSIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
E +LSLRVLVDHSIVESF +GG+ T+RVYPT AI +A +++FNN T+A
Sbjct: 539 EKSLSLRVLVDHSIVESFGEGGKVCITARVYPTLAIDKDAHLYVFNNGTSA 691
Score = 31.3 bits (62), Expect(4) = 3e-043
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1 / +2
Query: 785 GAAGRGALGPFGLFVLADRRLRREQTAVY 699
G+A R GPFGLFVLA + L +
Sbjct: 326 GSAARTVGGPFGLFVLASKDLNERTAVFF 412
Score = 28.1 bits (55), Expect(4) = 3e-043
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1 / +2
Query: 653 CQDESRSSSATDIVKRVVGSAV 588
C D+SRSS TDI K G+ V
Sbjct: 452 CSDQSRSSLQTDIDKTTYGAFV 517
>gb|DT633444.1|DT633444 EST1148375 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFU95 3' end, mRNA sequence
Length = 470
Score = 168 bits (362), Expect(2) = 3e-042
Identities = 68/101 (67%), Positives = 75/101 (74%)
Frame = -1 / +1
Query: 1853 GHAVSRDLIRWRRLPLAMVPDQWYDTNGVWTGSATTLPDGRLAMLYRGSTNASVQVQCLA 1674
GHAVS+DL+ W L LAM+PD+WYD NGVWTGSAT L + L MLY GSTN SVQVQ LA
Sbjct: 40 GHAVSKDLVHWFYLDLAMIPDRWYDINGVWTGSATFLANETLVMLYTGSTNESVQVQNLA 219
Query: 1673 VPADDADPLLTNWTKYEGNPVLYPPPGIGPKDFRDPTTVWI 1551
P D +DPLL W K E NPVL PP IG KDFRDP+T WI
Sbjct: 220 FPEDPSDPLLRKWVKSEANPVLVPPKEIGTKDFRDPSTGWI 342
Score = 25.4 bits (49), Expect(2) = 3e-042
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / +1
Query: 1541 DGAWRVVIGSK 1509
DG WR+ IGSK
Sbjct: 349 DGIWRIAIGSK 381
>gb|DR098925.1|DR098925 STRR1_48_G02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_48_G02_A033 5', mRNA sequence
Length = 537
Score = 128 bits (274), Expect(2) = 2e-041
Identities = 48/88 (54%), Positives = 64/88 (72%)
Frame = -1 / +3
Query: 1127 PAKRRRVLWGWVGETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTN 948
P K RR+LWGWVGETDSE+AD+ KGWASLQ IPR + D KT +N++QWP+EE++ LR+
Sbjct: 3 PVKERRILWGWVGETDSEQADLRKGWASLQTIPRHIWFDNKTKTNIIQWPIEEIDELRSG 182
Query: 947 STDLSGITIDYGSVFPLNLRRATQLDIE 864
+ + + + GSV +N A QLDIE
Sbjct: 183 ALVVENVLLQPGSVVKVNTTEAAQLDIE 266
Score = 66.1 bits (138), Expect(2) = 2e-041
Identities = 28/41 (68%), Positives = 30/41 (73%)
Frame = -1 / +3
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGS 594
EQTAVYFYV K DG L T FC DESRSS ATD++ V GS
Sbjct: 414 EQTAVYFYVVKSADGKLQTFFCHDESRSSLATDLILGVHGS 536
>gb|DT636133.1|DT636133 EST1151064 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGO37 3' end, mRNA sequence
Length = 870
Score = 151 bits (324), Expect(2) = 1e-040
Identities = 62/131 (47%), Positives = 87/131 (66%)
Frame = -1 / +1
Query: 1298 VLHVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTFYDPAK 1119
V HV+K S+D+ + DYY +G Y + + P + + GLRYD+GKFYASKTF+D K
Sbjct: 109 VKHVLKNSLDNTKVDYYTVGHYLPQLDRYLPDNGSIEGPNGLRYDYGKFYASKTFFDDNK 288
Query: 1118 RRRVLWGWVGETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTD 939
R+LWGW+ E+DS D++KGWASLQ IPR V LD T +L+QWPV E+E+LR ++
Sbjct: 289 SLRILWGWINESDSLVDDLNKGWASLQAIPRVVRLDPLTRRSLVQWPVSELESLREHNIR 468
Query: 938 LSGITIDYGSV 906
+ ++ SV
Sbjct: 469 KDHVVLERESV 501
Score = 37.3 bits (75), Expect(2) = 1e-040
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -1 / +1
Query: 1427 HRVDGTGMWECIDFYPVATRG 1365
H TGMWEC DFYPV+ G
Sbjct: 10 HSARHTGMWECPDFYPVSLYG 72
>gb|DR177171.1|DR177171 RTMNUT1_3_C06.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_3_C06_A029 5', mRNA sequence
Length = 745
Score = 82.2 bits (173), Expect(5) = 2e-039
Identities = 36/82 (43%), Positives = 47/82 (57%)
Frame = -1 / +1
Query: 1064 VSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTDLSGITIDYGSVFPLNLRR 885
++KGW+ LQ IPRTV LD T + LLQWPV EVE+LR + T I + GSV +
Sbjct: 1 ITKGWSGLQAIPRTVWLDNITRAQLLQWPVSEVESLRRSKTLKQNIDLSSGSVVEIAGIN 180
Query: 884 ATQLDIEAEFQLDRRAVMSLNE 819
A Q D+E F L R + +
Sbjct: 181 AAQADVEVSFDLPRLEITEFED 246
Score = 75.3 bits (158), Expect(5) = 2e-039
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = -1 / +1
Query: 566 TLSLRVLVDHSIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
TLSLRVLVDHSIVESFA+GG++ T+R YPT AI +A +++FNN T++
Sbjct: 511 TLSLRVLVDHSIVESFAEGGKACITARAYPTLAIGRDAHLYVFNNGTSS 657
Score = 30.9 bits (61), Expect(5) = 2e-039
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1 / +1
Query: 785 GAAGRGALGPFGLFVLADRRLRREQTAVY 699
G+A R +GPFGL VLA + L +
Sbjct: 292 GSAARTVVGPFGLLVLASKDLNERTAVFF 378
Score = 24.9 bits (48), Expect(5) = 2e-039
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1 / +1
Query: 653 CQDESRSSSATDIVKRVVGSAV 588
C D+SRSS D+ K G+ V
Sbjct: 418 CSDQSRSSLKNDLDKTTYGAFV 483
Score = 24.0 bits (46), Expect(5) = 2e-039
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1 / +1
Query: 434 NATAARVTATKLVVHEMDSS 375
N + VTATKL+ EM SS
Sbjct: 640 NNGTSSVTATKLIAWEMASS 699
>gb|DR022623.1|DR022623 STRS1_52_G08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_52_G08_A034 3', mRNA sequence
Length = 863
Score = 79.0 bits (166), Expect(3) = 4e-039
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1 / -2
Query: 566 TLSLRVLVDHSIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
++S+R LVDHSIVES+AQGGR TSRVYPT+A+ A +FLFNNAT A
Sbjct: 385 SISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTA 239
Score = 78.0 bits (164), Expect(3) = 4e-039
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -1 / -2
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEA 567
EQTAVYFYV K DG L T FC DESRSS ATD++ V GS+VPVL +E+
Sbjct: 532 EQTAVYFYVVKSADGKLQTFFCHDESRSSLATDLILGVHGSSVPVLANES 383
Score = 51.0 bits (105), Expect(3) = 4e-039
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = -1 / -2
Query: 998 SNLLQWPVEEVETLRTNSTDLSGITIDYGSVFPLNLRRATQLDIE 864
+N++QWP+EE++ LR+ + + + + GSV +N A QLDIE
Sbjct: 814 TNIIQWPIEEIDELRSGALVVENVLLQPGSVVKVNTTEAAQLDIE 680
>gb|DR690131.1|DR690131 EST1080220 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACR49 3' end, mRNA sequence
Length = 824
Score = 86.3 bits (182), Expect(4) = 1e-038
Identities = 38/82 (46%), Positives = 47/82 (57%)
Frame = -1 / +3
Query: 1064 VSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTDLSGITIDYGSVFPLNLRR 885
VSKGWA LQ +PRT+ LD+ T S LLQWPV EVE+LR I + GSV +
Sbjct: 3 VSKGWAGLQAVPRTIWLDSVTRSQLLQWPVPEVESLRRKEIYKQSIDLSSGSVVEIAGLN 182
Query: 884 ATQLDIEAEFQLDRRAVMSLNE 819
A Q+D+E F L R + E
Sbjct: 183 AAQVDVEVSFDLPRLEIAEFEE 248
Score = 71.6 bits (150), Expect(4) = 1e-038
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = -1 / +3
Query: 572 EATLSLRVLVDHSIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATA 423
E +LSLRVLVDHSIVESF +GG+ T+RVYPT I +A +++FNN T+
Sbjct: 507 EKSLSLRVLVDHSIVESFGEGGKVCITARVYPTLVIDKDAHLYVFNNGTS 656
Score = 31.3 bits (62), Expect(4) = 1e-038
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1 / +3
Query: 785 GAAGRGALGPFGLFVLADRRLRREQTAVY 699
G+A R GPFGLFVLA + L +
Sbjct: 294 GSAARTVGGPFGLFVLASKDLNERTAVFF 380
Score = 28.1 bits (55), Expect(4) = 1e-038
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1 / +3
Query: 653 CQDESRSSSATDIVKRVVGSAV 588
C D+SRSS TDI K G+ V
Sbjct: 420 CSDQSRSSLQTDIDKTTYGAFV 485
>gb|CX649548.1|CX649548 COLD1_36_A10.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_36_A10_A029 3', mRNA sequence
Length = 803
Score = 144 bits (308), Expect(2) = 2e-038
Identities = 61/99 (61%), Positives = 75/99 (75%)
Frame = -1 / +3
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEATLSLRVLVDH 537
EQTAVYFYVAK DG L T C DE+RSS A++++ + GS+ PVL DE ++S+R LVDH
Sbjct: 60 EQTAVYFYVAKSTDGQLQTFLCHDETRSSLASELILGIHGSSFPVLADEKSISVRTLVDH 239
Query: 536 SIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
SIVES+AQGGR TSRVYP ++ A +FLFNNATAA
Sbjct: 240 SIVESYAQGGRRCITSRVYPIRSLNGAAKLFLFNNATAA 356
Score = 36.8 bits (74), Expect(2) = 2e-038
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1 / +3
Query: 776 GRGALGPFGLFVLADRRLRREQTAVYF 696
GRG LGPFGL VLA++ L + ++
Sbjct: 3 GRGRLGPFGLLVLAEKNLTEQTAVYFY 83
>gb|CF478708.1|CF478708 RTWW3_16_A04.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_16_A04_A022 5', mRNA sequence
Length = 666
Score = 158 bits (340), Expect = 1e-037
Identities = 65/151 (43%), Positives = 93/151 (61%)
Frame = -1 / +2
Query: 1298 VLHVMKASMDDDRHDYYALGRYDAAANAWTPIDAGRDVGIGLRYDWGKFYASKTFYDPAK 1119
V HV+K S+DD + DYY +G Y + + P + + GLRYD+GKFYASKTF+DP K
Sbjct: 68 VKHVLKNSLDDTKVDYYTVGHYLPHLDKYVPENGSVEGPNGLRYDYGKFYASKTFFDPRK 247
Query: 1118 RRRVLWGWVGETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTD 939
RR+LWGW+ E+DS D++K WASLQ IPR V LD T +L QWPV E+E+LR +
Sbjct: 248 SRRILWGWINESDSVADDLNKQWASLQAIPRVVRLDPLTRRSLFQWPVPELESLRAYNVR 427
Query: 938 LSGITIDYGSVFPLNLRRATQLDIEAEFQLD 846
+ ++ SV + + ++ E + +
Sbjct: 428 KDHVVLERESVMKVEGFNSGAAQVDVEVEFE 520
>gb|DR117697.1|DR117697 RTMG1_8_C08.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_8_C08_A029 5', mRNA sequence
Length = 872
Score = 79.0 bits (166), Expect(3) = 2e-036
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1 / +1
Query: 566 TLSLRVLVDHSIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
++S+R LVDHSIVES+AQGGR TSRVYPT+A+ A +FLFNNAT A
Sbjct: 415 SISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTA 561
Score = 78.0 bits (164), Expect(3) = 2e-036
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -1 / +1
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEA 567
EQTAVYFYV K DG L T FC DESRSS ATD++ V GS+VPVL +E+
Sbjct: 268 EQTAVYFYVVKSADGKLQTFFCHDESRSSLATDLILGVHGSSVPVLANES 417
Score = 42.3 bits (86), Expect(3) = 2e-036
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -1 / +1
Query: 983 WPVEEVETLRTNSTDLSGITIDYGSVFPLNLRRATQLDIE 864
WP+EE++ LR+ + + + + GSV +N A QLDIE
Sbjct: 1 WPIEEIDELRSVALVVENVLLQPGSVVKVNTTEAAQLDIE 120
>gb|CX649623.1|CX649623 COLD1_36_A10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_36_A10_A029 5', mRNA sequence
Length = 479
Score = 144 bits (308), Expect(2) = 8e-035
Identities = 61/99 (61%), Positives = 75/99 (75%)
Frame = -1 / +2
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEATLSLRVLVDH 537
EQTAVYFYVAK DG L T C DE+RSS A++++ + GS+ PVL DE ++S+R LVDH
Sbjct: 41 EQTAVYFYVAKSTDGQLQTFLCHDETRSSLASELILGIHGSSFPVLADEKSISVRTLVDH 220
Query: 536 SIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
SIVES+AQGGR TSRVYP ++ A +FLFNNATAA
Sbjct: 221 SIVESYAQGGRRCITSRVYPIRSLNGAAKLFLFNNATAA 337
Score = 24.9 bits (48), Expect(2) = 8e-035
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1 / +2
Query: 758 PFGLFVLADRRLRREQTAVYF 696
PFGL VLA++ L + ++
Sbjct: 2 PFGLLVLAEKNLTEQTAVYFY 64
>gb|CF471271.1|CF471271 RTDS1_2_E09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_2_E09_A015 5', mRNA sequence
Length = 614
Score = 102 bits (218), Expect(4) = 7e-034
Identities = 43/88 (48%), Positives = 54/88 (61%)
Frame = -1 / +1
Query: 1106 LWGWVGETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTDLSGI 927
LWGW+ E+DS D+SKGWA +Q IPRT+ LD+ T + LLQWPV EVE LR I
Sbjct: 1 LWGWINESDSVSDDISKGWAGVQAIPRTIWLDSATRTWLLQWPVSEVEALRRKKILKRNI 180
Query: 926 TIDYGSVFPLNLRRATQLDIEAEFQLDR 843
+ GSV + A Q+D+E F L R
Sbjct: 181 DLSSGSVVEIAGINAAQVDVEVSFDLPR 264
Score = 41.8 bits (85), Expect(4) = 7e-034
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -1 / +1
Query: 566 TLSLRVLVDHSIVESFAQGG 507
+LSLRVLVDHSIVESF +GG
Sbjct: 553 SLSLRVLVDHSIVESFGEGG 612
Score = 30.9 bits (61), Expect(4) = 7e-034
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1 / +1
Query: 785 GAAGRGALGPFGLFVLADRRLRREQTAVY 699
G+A R +GPFGL VLA + L +
Sbjct: 334 GSAARTVVGPFGLLVLASKDLNERTAVFF 420
Score = 25.8 bits (50), Expect(4) = 7e-034
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1 / +1
Query: 653 CQDESRSSSATDIVKRVVGSAV 588
C D+SRSS +DI K G+ V
Sbjct: 460 CSDQSRSSLHSDIDKTTYGTFV 525
>gb|CF388658.1|CF388658 RTDR2_4_G01.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_4_G01_A021 5', mRNA
sequence
Length = 661
Score = 79.0 bits (166), Expect(3) = 6e-033
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1 / +2
Query: 566 TLSLRVLVDHSIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
++S+R LVDHSIVES+AQGGR TSRVYPT+A+ A +FLFNNAT A
Sbjct: 401 SISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTA 547
Score = 78.0 bits (164), Expect(3) = 6e-033
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -1 / +2
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEA 567
EQTAVYFYV K DG L T FC DESRSS ATD++ V GS+VPVL +E+
Sbjct: 254 EQTAVYFYVVKSADGKLQTFFCHDESRSSLATDLILGVHGSSVPVLANES 403
Score = 29.5 bits (58), Expect(3) = 6e-033
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1 / +2
Query: 968 VETLRTNSTDLSGITIDYGSVFPLNLRRATQLDIE 864
++ LR+ + + + + GSV +N A QLDIE
Sbjct: 2 IDELRSGALVVENVLLQPGSVVKVNTTEAAQLDIE 106
>gb|DR024426.1|DR024426 STRS1_64_H04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_64_H04_A034 5', mRNA sequence
Length = 815
Score = 73.5 bits (154), Expect(4) = 4e-032
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = -1 / +3
Query: 572 EATLSLRVLVDHSIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATA 423
E +LSLRVLVDHSIVESF +GG+ T+RVYPT AI +A +++FNN T+
Sbjct: 495 EKSLSLRVLVDHSIVESFGEGGKVCITARVYPTLAIDKDAHLYVFNNGTS 644
Score = 62.5 bits (130), Expect(4) = 4e-032
Identities = 30/73 (41%), Positives = 38/73 (52%)
Frame = -1 / +3
Query: 1037 GIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTDLSGITIDYGSVFPLNLRRATQLDIEAE 858
G RT+ LD+ T S LLQWPV EVE+LR I + GSV + A Q+D+E
Sbjct: 18 GGSRTIWLDSVTRSQLLQWPVPEVESLRRKEIYKQSIDLSSGSVVEIAGLNAAQVDVEVS 197
Query: 857 FQLDRRAVMSLNE 819
F L R + E
Sbjct: 198 FDLPRLEIAEFEE 236
Score = 31.3 bits (62), Expect(4) = 4e-032
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1 / +3
Query: 785 GAAGRGALGPFGLFVLADRRLRREQTAVY 699
G+A R GPFGLFVLA + L +
Sbjct: 282 GSAARTVGGPFGLFVLASKDLNERTAVFF 368
Score = 28.1 bits (55), Expect(4) = 4e-032
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1 / +3
Query: 653 CQDESRSSSATDIVKRVVGSAV 588
C D+SRSS TDI K G+ V
Sbjct: 408 CSDQSRSSLQTDIDKTTYGAFV 473
>gb|DR167049.1|DR167049 RTPHOS1_16_G01.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_16_G01_A029 3', mRNA sequence
Length = 737
Score = 79.0 bits (166), Expect(2) = 3e-031
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1 / +2
Query: 566 TLSLRVLVDHSIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
++S+R LVDHSIVES+AQGGR TSRVYPT+A+ A +FLFNNAT A
Sbjct: 227 SISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTA 373
Score = 78.0 bits (164), Expect(2) = 3e-031
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -1 / +2
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEA 567
EQTAVYFYV K DG L T FC DESRSS ATD++ V GS+VPVL +E+
Sbjct: 80 EQTAVYFYVVKSADGKLQTFFCHDESRSSLATDLILGVHGSSVPVLANES 229
>gb|DR098850.1|DR098850 STRR1_48_G02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_48_G02_A033 3', mRNA sequence
Length = 665
Score = 79.0 bits (166), Expect(2) = 3e-031
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1 / +2
Query: 566 TLSLRVLVDHSIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
++S+R LVDHSIVES+AQGGR TSRVYPT+A+ A +FLFNNAT A
Sbjct: 170 SISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTA 316
Score = 78.0 bits (164), Expect(2) = 3e-031
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -1 / +2
Query: 716 EQTAVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEA 567
EQTAVYFYV K DG L T FC DESRSS ATD++ V GS+VPVL +E+
Sbjct: 23 EQTAVYFYVVKSADGKLQTFFCHDESRSSLATDLILGVHGSSVPVLANES 172
>gb|CO199666.1|CO199666 GEO2_2_E12.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_2_E12_A032 5', mRNA sequence
Length = 836
Score = 76.7 bits (161), Expect(5) = 4e-031
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = -1 / +3
Query: 566 TLSLRVLVDHSIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
TLSLRVLVDHSIVESFA+GG++ T+R YPT+AI A +++FNN T++
Sbjct: 540 TLSLRVLVDHSIVESFAEGGQACITARAYPTQAIGEGAHLYVFNNGTSS 686
Score = 51.9 bits (107), Expect(5) = 4e-031
Identities = 25/65 (38%), Positives = 31/65 (47%)
Frame = -1 / +3
Query: 1013 DTKTGSNLLQWPVEEVETLRTNSTDLSGITIDYGSVFPLNLRRATQLDIEAEFQLDRRAV 834
D G + LQWPV EVE+LR N T I + GSV + Q D+E F L R +
Sbjct: 81 DITKGWSGLQWPVSEVESLRRNKTFRQNIDLSSGSVVEIAGINVAQADVEVSFDLPRLEI 260
Query: 833 MSLNE 819
E
Sbjct: 261 TEFKE 275
Score = 30.9 bits (61), Expect(5) = 4e-031
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1 / +3
Query: 785 GAAGRGALGPFGLFVLADRRLRREQTAVY 699
G+A R +GPFGL VLA + L +
Sbjct: 321 GSAARTVVGPFGLLVLASKDLNERTAVFF 407
Score = 25.4 bits (49), Expect(5) = 4e-031
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1 / +3
Query: 653 CQDESRSSSATDIVKRVVGSAV 588
C D+SRSS +D+ K G+ V
Sbjct: 447 CSDQSRSSLQSDLDKTTYGTFV 512
Score = 24.0 bits (46), Expect(5) = 4e-031
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1 / +3
Query: 434 NATAARVTATKLVVHEMDSS 375
N + VTATKL+ EM SS
Sbjct: 669 NNGTSSVTATKLIAWEMASS 728
>gb|DR117624.1|DR117624 RTMG1_8_C08.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_8_C08_A029 3', mRNA sequence
Length = 828
Score = 79.0 bits (166), Expect(2) = 3e-029
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1 / +3
Query: 566 TLSLRVLVDHSIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATAA 420
++S+R LVDHSIVES+AQGGR TSRVYPT+A+ A +FLFNNAT A
Sbjct: 141 SISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTA 287
Score = 71.2 bits (149), Expect(2) = 3e-029
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = -1 / +3
Query: 707 AVYFYVAKGLDGSLATHFCQDESRSSSATDIVKRVVGSAVPVLEDEA 567
AVYFYV K DG L T FC DESRSS ATD++ V GS+VPVL +E+
Sbjct: 3 AVYFYVVKSADGKLQTFFCHDESRSSLATDLILGVHGSSVPVLANES 143
>gb|BF777721.1|BF777721 NXSI_074_E12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_074_E12 5' similar to Arabidopsis thaliana
sequence At1g62660 putative beta-fructosidase (At1g62660)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 414
Score = 95.9 bits (203), Expect(2) = 8e-029
Identities = 37/75 (49%), Positives = 52/75 (69%)
Frame = -1 / +1
Query: 1088 ETDSERADVSKGWASLQGIPRTVLLDTKTGSNLLQWPVEEVETLRTNSTDLSGITIDYGS 909
ETDSE+AD+ KGWASLQ IPR + D KT +N++QWP+EE++ LR+ + + + + GS
Sbjct: 1 ETDSEQADLRKGWASLQTIPRHIWFDNKTKTNIIQWPIEEIDELRSGALVVENVLLQPGS 180
Query: 908 VFPLNLRRATQLDIE 864
V +N QLDIE
Sbjct: 181 VVKVNTTEXAQLDIE 225
Score = 52.8 bits (109), Expect(2) = 8e-029
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = -1 / +1
Query: 806 YNCSTSGGAAGRGALGPFGLFVLADRRLRREQTAVYFYV 690
YNC T GGAAG LGPFGL V+A++ L + ++ V
Sbjct: 286 YNCXTXGGAAGXXVLGPFGLLVIAEKNLTXQTXVYFYVV 402
>gb|AL750370.1|AL750370 AL750370 RN Pinus pinaster cDNA clone RN01G03 similar to INVERTASE,
mRNA sequence
Length = 809
Score = 125 bits (268), Expect = 9e-028
Identities = 49/88 (55%), Positives = 65/88 (73%)
Frame = -1 / +3
Query: 1208 PIDAGRDVGIGLRYDWGKFYASKTFYDPAKRRRVLWGWVGETDSERADVSKGWASLQGIP 1029
P D + GLR+D+GKF AS+TF+D K RR+LWGW+ E+DS D++KGWASLQ IP
Sbjct: 171 PDDGSVEGHNGLRFDYGKFNASRTFFDDNKSRRILWGWINESDSVADDLNKGWASLQAIP 350
Query: 1028 RTVLLDTKTGSNLLQWPVEEVETLRTNS 945
R V LD TG +L+QWPV E+E+LR ++
Sbjct: 351 RVVQLDPLTGRSLVQWPVPELESLREHN 434
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 725,465,833
Number of Sequences: 355925
Number of extensions: 10417347
Number of successful extensions: 80763
Number of sequences better than 1.0e-020: 64
length of database: 72,425,745
effective HSP length: 55
effective length of database: 52,849,870
effective search space used: 29913026420
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)