TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3712941.2.1
(1473 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|BD236034.1| Materials and method for modification of pl... 106 2e-056
gb|DR118455.1|DR118455 RTMG1_17_C11.b1_A029 Roots minus mag... 109 2e-051
gb|DR089733.1|DR089733 RTAL1_10_B01.g1_A029 Roots plus adde... 110 5e-049
gb|CX645436.1|CX645436 COLD1_2_F10.g1_A029 Root cold Pinus ... 111 7e-049
gb|DR078956.1|DR078956 RTFEPL1_8_C02.b1_A029 Roots plus add... 192 7e-048
gb|CF395289.1|CF395289 RTDS2_10_F05.g1_A021 Drought-stresse... 107 5e-045
gb|CO368127.1|CO368127 RTK1_38_F10.g1_A029 Roots minus pota... 110 9e-045
gb|DR102479.1|DR102479 STRR1_81_A06.g1_A033 Stem Response R... 127 3e-043
gb|DR682440.1|DR682440 EST1072515 Normalized pine embryo li... 123 2e-042
gb|DR079034.1|DR079034 RTFEPL1_8_C02.g1_A029 Roots plus add... 168 1e-040
gb|DR058701.1|DR058701 RTNIT1_13_H07.b1_A029 Roots minus ni... 167 1e-040
gb|CO370469.1|CO370469 RTK1_68_C11.b1_A029 Roots minus pota... 109 4e-040
gb|DR071668.1|DR071668 RTDK1_21_H06.b1_A029 Roots, dark Pin... 127 8e-040
gb|DR110698.1|DR110698 RTS1_12_A01.g1_A029 Roots minus sulf... 108 2e-039
gb|CO200735.1|CO200735 RTCNT2_1_E08.b1_A029 Root control 2 ... 163 2e-039
gb|CO200810.1|CO200810 RTCNT2_1_E08.g1_A029 Root control 2 ... 161 1e-038
gb|DR050421.1|DR050421 RTBOR1_23_H07.b1_A029 Roots plus add... 160 2e-038
gb|DR110618.1|DR110618 RTS1_12_A01.b1_A029 Roots minus sulf... 110 2e-038
gb|DR052711.1|DR052711 RTCA1_6_H10.b1_A029 Roots minus calc... 158 8e-038
gb|DR117549.1|DR117549 RTMG1_7_D09.g1_A029 Roots minus magn... 110 2e-037
gb|DR118532.1|DR118532 RTMG1_17_C11.g1_A029 Roots minus mag... 110 2e-037
gb|CF393700.1|CF393700 RTDR3_15_G09.g1_A022 Loblolly pine r... 155 1e-036
gb|CO171645.1|CO171645 NDL1_23_A05.g1_A029 Needles control ... 153 3e-036
gb|DR050495.1|DR050495 RTBOR1_23_H07.g1_A029 Roots plus add... 153 3e-036
dbj|BD236037.1| Materials and method for modification of pl... 111 5e-036
gb|DR070146.1|DR070146 RTDK1_11_C07.g1_A029 Roots, dark Pin... 149 3e-035
gb|DR047558.1|DR047558 RTBOR1_1_H09.g1_A029 Roots plus adde... 149 6e-035
gb|DR056919.1|DR056919 RTNIT1_1_H10.b1_A029 Roots minus nit... 149 6e-035
gb|CF394019.1|CF394019 RTDS2_2_B12.g1_A021 Drought-stressed... 147 2e-034
gb|DR688160.1|DR688160 EST1078244 Normalized pine embryo li... 115 3e-034
gb|DR682092.1|DR682092 EST1072167 Normalized pine embryo li... 138 3e-034
gb|DR071753.1|DR071753 RTDK1_21_H06.g1_A029 Roots, dark Pin... 115 3e-034
dbj|BD236038.1| Materials and method for modification of pl... 115 3e-034
gb|DR090287.1|DR090287 RTAL1_14_B08.b1_A029 Roots plus adde... 145 8e-034
dbj|BD236002.1| Materials and method for modification of pl... 112 2e-033
gb|DN611386.1|DN611386 EST964436 Subtracted pine embryo lib... 144 2e-033
gb|CF474706.1|CF474706 RTWW2_7_D09.g1_A021 Well-watered lob... 143 3e-033
gb|CF475175.1|CF475175 RTWW2_14_F07.g1_A021 Well-watered lo... 143 3e-033
gb|CX653225.1|CX653225 COLD1_64_E08.b1_A029 Root cold Pinus... 143 3e-033
gb|DR047494.1|DR047494 RTBOR1_1_H09.b1_A029 Roots plus adde... 143 3e-033
gb|CR354730.1|CR354730 CR354730 Pinus pinaster differenciat... 111 2e-032
gb|CF473280.1|CF473280 RTWW2_1_H04.g1_A021 Well-watered lob... 140 3e-032
gb|DR177124.1|DR177124 RTMNUT1_3_G01.b1_A029 Roots minus mi... 140 3e-032
dbj|BD236005.1| Materials and method for modification of pl... 110 3e-032
gb|CF393636.1|CF393636 RTDR3_15_C10.g1_A022 Loblolly pine r... 109 5e-032
gb|CF390271.1|CF390271 RTDR2_18_E10.g1_A021 Loblolly pine r... 109 6e-032
gb|DR058791.1|DR058791 RTNIT1_13_H07.g1_A029 Roots minus ni... 138 7e-032
gb|DT634092.1|DT634092 EST1149023 Normalized pine embryo li... 109 9e-032
gb|DR687288.1|DR687288 EST1077369 Normalized pine embryo li... 109 9e-032
gb|BQ198594.1|BQ198594 NXLV133_D07_F NXLV (Nsf Xylem Late w... 138 1e-031
gb|DR102416.1|DR102416 STRR1_81_A06.b1_A033 Stem Response R... 127 2e-031
gb|BM493421.1|BM493421 NXLV_064_B06_F NXLV (Nsf Xylem Late ... 137 2e-031
gb|DR682441.1|DR682441 EST1072516 Normalized pine embryo li... 71 3e-031
gb|DT631114.1|DT631114 EST1146045 Normalized pine embryo li... 71 3e-031
gb|DR387861.1|DR387861 RTHG1_24_D03.g2_A029 Roots plus adde... 109 3e-031
gb|CF474659.1|CF474659 RTWW2_7_D09.b1_A021 Well-watered lob... 136 3e-031
gb|DT638197.1|DT638197 EST1153128 Normalized pine embryo li... 73 7e-031
gb|DR693927.1|DR693927 EST1084017 Normalized pine embryo li... 73 7e-031
gb|DR052795.1|DR052795 RTCA1_6_H10.g1_A029 Roots minus calc... 135 9e-031
gb|DR021006.1|DR021006 STRS1_40_E12.g1_A034 Shoot tip pitch... 110 1e-030
gb|DR691737.1|DR691737 EST1081824 Normalized pine embryo li... 104 1e-030
gb|DR694455.1|DR694455 EST1084547 Normalized pine embryo li... 71 2e-030
gb|DT638522.1|DT638522 EST1153453 Normalized pine embryo li... 71 2e-030
gb|AL750869.1|AL750869 AL750869 RS Pinus pinaster cDNA clon... 132 8e-030
gb|CO198895.1|CO198895 GEO1_17_H02.b1_A029 Root gravitropis... 130 3e-029
gb|CX713672.1|CX713672 RTPQ1_11_G04.g1_A032 Roots treated w... 129 5e-029
dbj|BD236003.1| Materials and method for modification of pl... 128 1e-028
gb|DR021894.1|DR021894 STRS1_47_C06.g1_A034 Shoot tip pitch... 109 1e-028
gb|DR089645.1|DR089645 RTAL1_10_B01.b1_A029 Roots plus adde... 110 2e-028
gb|DR090356.1|DR090356 RTAL1_14_B08.g1_A029 Roots plus adde... 127 2e-028
gb|CO368041.1|CO368041 RTK1_38_F10.b1_A029 Roots minus pota... 110 2e-028
gb|BM158105.1|BM158105 NXLV_029_E07_F NXLV (Nsf Xylem Late ... 126 5e-028
gb|CO200581.1|CO200581 GEO2_8_G01.b1_A032 Root gravitropism... 110 3e-027
gb|CO370544.1|CO370544 RTK1_68_C11.g1_A029 Roots minus pota... 109 5e-027
gb|CR392181.1|CR392181 CR392181 RN Pinus pinaster cDNA clon... 79 7e-027
gb|CF473185.1|CF473185 RTWW2_1_H04.b1_A021 Well-watered lob... 120 2e-026
gb|DR020928.1|DR020928 STRS1_40_E12.b1_A034 Shoot tip pitch... 110 5e-026
gb|BM133768.1|BM133768 NXLV_012_A05_F NXLV (Nsf Xylem Late ... 118 1e-025
gb|DR387786.1|DR387786 RTHG1_24_D03.b1_A029 Roots plus adde... 110 1e-025
gb|BM158403.1|BM158403 NXLV_034_A05_F NXLV (Nsf Xylem Late ... 115 7e-025
gb|DR162787.1|DR162787 RTFE1_20_B06.g1_A029 Roots minus iro... 85 8e-025
gb|AL750912.1|AL750912 AL750912 RS Pinus pinaster cDNA clon... 113 4e-024
gb|CO198975.1|CO198975 GEO1_17_H02.g1_A029 Root gravitropis... 113 4e-024
gb|BM158503.1|BM158503 NXLV_035_D08_F NXLV (Nsf Xylem Late ... 112 5e-024
gb|CF393612.1|CF393612 RTDR3_15_C10.b1_A022 Loblolly pine r... 110 2e-023
gb|DR021811.1|DR021811 STRS1_47_C06.b1_A034 Shoot tip pitch... 110 2e-023
gb|BF518299.1|BF518299 NXSI_037_F05_F NXSI (Nsf Xylem Side ... 83 2e-023
gb|DR687181.1|DR687181 EST1077260 Normalized pine embryo li... 109 5e-023
gb|AL750851.1|AL750851 AL750851 RS Pinus pinaster cDNA clon... 104 1e-021
gb|CF390220.1|CF390220 RTDR2_18_E10.b1_A021 Loblolly pine r... 103 4e-021
>dbj|BD236034.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 1293
Score = 106 bits (227), Expect(3) = 2e-056
Identities = 47/121 (38%), Positives = 73/121 (60%)
Frame = +3 / +2
Query: 201 YHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPS 380
Y E+L + EL+ + ++ + LW LDPA RDA + EA T + EI C+R+P
Sbjct: 263 YGEDLLKALDRELTNDFERLVVLWSLDPAERDAYLANEATKRWTSSNQVLMEIACTRSPQ 442
Query: 381 QLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDLY 560
QL + +Q Y+AR+ +E D+AHHT+GD +KLL+ R +G EV+ T+ +AK L+
Sbjct: 443 QLLMARQAYHARYKKSMEEDVAHHTTGDFRKLLVPLGSSYRNDGDEVNMTLAKAEAKILH 622
Query: 561 K 563
+
Sbjct: 623 E 625
Score = 105 bits (224), Expect(3) = 2e-056
Identities = 46/124 (37%), Positives = 71/124 (57%)
Frame = +3 / +2
Query: 603 IRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKL 782
IR+ RS A + + + Y + + + K +K++ F L ++C P KYF K+
Sbjct: 662 IRILATRSKAQVNATLNHYKNEFGNDINKDLKTDPKDAFLTILRATVKCLTRPEKYFEKV 841
Query: 783 LRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLS 962
LR A+ GTD+ L RVV TR E+DM++I EY ++ PL AI +T+G+Y LL+
Sbjct: 842 LRLAINKRGTDEGALTRVVATRAEVDMKFISEEYQRRNSIPLDRAIVKDTTGDYEKMLLA 1021
Query: 963 LVGH 974
L+GH
Sbjct: 1022 LIGH 1033
Score = 47.3 bits (97), Expect(3) = 2e-056
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +2 / +2
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M++LT+P P D L AF G+G + I+IL HR++ QR LI+Q Y
Sbjct: 95 MSTLTVPQPLPPVADDCEQLRTAFAGWGTNEKLIISILGHRNAAQRKLIRQTY 253
>gb|DR118455.1|DR118455 RTMG1_17_C11.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_C11_A029 3', mRNA sequence
Length = 891
Score = 109 bits (233), Expect(3) = 2e-051
Identities = 48/134 (35%), Positives = 83/134 (61%)
Frame = +3 / -3
Query: 198 MYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTP 377
+Y E+ R+ SEL+ + ++A+ LW LDP RDA + E++ + + R+ EI +R+
Sbjct: 703 LYEEDFLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSS 524
Query: 378 SQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
++L ++Q Y+ R+ LE D+A HT GD +KLL+ + RYEGPEVD + +AK L
Sbjct: 523 TELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQL 344
Query: 558 YKAGEKRLGTDEKI 599
++A + + +E++
Sbjct: 343 HEAIKDKAFGNEEL 302
Score = 85.8 bits (181), Expect(3) = 2e-051
Identities = 41/100 (41%), Positives = 59/100 (59%)
Frame = +3 / -3
Query: 603 IRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKL 782
IR+ T RS A L + + Y Y + K +K+ +F +L +++C P +YFAK+
Sbjct: 301 IRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFAKV 122
Query: 783 LRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKK 902
LR A+ LGTD+ L+RVVVTR E D+ IK EY K+ K
Sbjct: 121 LRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRKRTSK 2
Score = 46.9 bits (96), Expect(3) = 2e-051
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +2 / -3
Query: 38 SLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
++ +P P+P +D+ L KAF+G+G + I IL HR + QR I+Q Y
Sbjct: 862 TIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTY 710
>gb|DR089733.1|DR089733 RTAL1_10_B01.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_10_B01_A029 5', mRNA sequence
Length = 766
Score = 110 bits (235), Expect(2) = 5e-049
Identities = 51/123 (41%), Positives = 75/123 (60%)
Frame = +3 / +1
Query: 603 IRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKL 782
IR+ T RS A L + + Y Y + K +K+ +F +L +++C P +YFAK+
Sbjct: 397 IRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFAKV 576
Query: 783 LRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLS 962
LR A+ LGTD+ L+RVVVTR E D+ IK EY K+ K L A+ ++TSG+Y LL+
Sbjct: 577 LRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRKRTSKALEHAVAADTSGDYEELLLT 756
Query: 963 LVG 971
L+G
Sbjct: 757 LIG 765
Score = 105 bits (224), Expect(2) = 5e-049
Identities = 47/131 (35%), Positives = 81/131 (61%)
Frame = +3 / +1
Query: 207 EELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPSQL 386
E+ R+ SEL+ + ++A+ LW LDP RDA + E++ + + R+ EI +R+ ++L
Sbjct: 4 EDFLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTEL 183
Query: 387 QIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDLYKA 566
++Q Y+ R+ LE D+A HT GD +KLL+ + RYEGPEVD + +AK L++A
Sbjct: 184 WSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEA 363
Query: 567 GEKRLGTDEKI 599
+ + +E++
Sbjct: 364 IKDKAFGNEEL 396
>gb|CX645436.1|CX645436 COLD1_2_F10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_2_F10_A029 5', mRNA sequence
Length = 768
Score = 111 bits (238), Expect(2) = 7e-049
Identities = 52/123 (42%), Positives = 75/123 (60%)
Frame = +3 / +1
Query: 603 IRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKL 782
IR+ T RS A L + + Y Y + K +K+ +F +L +++C P +YFAK+
Sbjct: 379 IRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFAKV 558
Query: 783 LRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLS 962
LR A+ LGTD+ LIRVVVTR E D+ IK EY K+ K L A+ ++TSG+Y LL+
Sbjct: 559 LRLAIDKLGTDEEALIRVVVTRAETDLSNIKEEYRKRTSKALEHAVAADTSGDYEELLLT 738
Query: 963 LVG 971
L+G
Sbjct: 739 LIG 747
Score = 103 bits (220), Expect(2) = 7e-049
Identities = 46/126 (36%), Positives = 79/126 (62%)
Frame = +3 / +1
Query: 222 RISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPSQLQIMKQ 401
R+ SEL+ + ++A+ LW LDP RDA + E++ + + R+ EI +R+ ++L ++Q
Sbjct: 1 RLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWSVRQ 180
Query: 402 TYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDLYKAGEKRL 581
Y+ R+ LE D+A HT GD +KLL+ + RYEGPEVD + +AK L++A + +
Sbjct: 181 AYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIKDKA 360
Query: 582 GTDEKI 599
+E++
Sbjct: 361 FGNEEL 378
>gb|DR078956.1|DR078956 RTFEPL1_8_C02.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_8_C02_A029 3', mRNA sequence
Length = 864
Score = 192 bits (413), Expect = 7e-048
Identities = 90/217 (41%), Positives = 129/217 (59%)
Frame = +3 / -1
Query: 195 SMYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRT 374
+MY E+L R+ EL G +KA+ LW+ +PA RDA + AL G D RA E+IC+R+
Sbjct: 651 AMYKEDLCKRLEKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRS 472
Query: 375 PSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKD 554
+Q+ +++ Y R+ L+ D+ T+G QKLLLA + R E VD T DAK
Sbjct: 471 STQIVKIREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKM 292
Query: 555 LYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALL 734
LY+A E R GTDE FIR+F+ER+ +HL ++ + Y Y + K +K ET FE A+
Sbjct: 291 LYEASEGRCGTDEDTFIRIFSERAVSHLHAIFACYKQEYGHDIMKGLKRETQKEFEEAIR 112
Query: 735 TILRCAENPAKYFAKLLRKAMKGLGTDDMTLIRVVVT 845
++ PA YFAK+L + MKGL D+ + RV+VT
Sbjct: 111 VTIKSMYLPANYFAKVLHRGMKGLLNDESAITRVMVT 1
>gb|CF395289.1|CF395289 RTDS2_10_F05.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_10_F05_A021 5', mRNA sequence
Length = 757
Score = 107 bits (229), Expect(2) = 5e-045
Identities = 50/123 (40%), Positives = 74/123 (60%)
Frame = +3 / +2
Query: 603 IRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKL 782
IR+ T RS A L + + Y Y + K +K+ +F +L +++C P +YFAK+
Sbjct: 359 IRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFAKV 538
Query: 783 LRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLS 962
LR A+ LGTD+ L+RVVVTR E D+ IK EY + K L A+ ++TSG+Y LL+
Sbjct: 539 LRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRXRTSKALEHAVAADTSGDYEELLLT 718
Query: 963 LVG 971
L+G
Sbjct: 719 LIG 727
Score = 95.0 bits (201), Expect(2) = 5e-045
Identities = 42/116 (36%), Positives = 72/116 (62%)
Frame = +3 / +2
Query: 252 KKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPSQLQIMKQTYYARFGTYL 431
++A+ LW LDP RDA + E++ + + R+ EI +R+ ++L ++Q Y+ R+ L
Sbjct: 11 ERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWSVRQAYHIRYKKSL 190
Query: 432 EHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDLYKAGEKRLGTDEKI 599
E D+A HT GD +KLL+ + RYEGPEVD + +AK L++A + + +E++
Sbjct: 191 EEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIKDKAFGNEEL 358
>gb|CO368127.1|CO368127 RTK1_38_F10.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_38_F10_A029 5', mRNA sequence
Length = 857
Score = 110 bits (235), Expect(2) = 9e-045
Identities = 51/123 (41%), Positives = 75/123 (60%)
Frame = +3 / +2
Query: 603 IRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKL 782
IR+ T RS A L + + Y Y + K +K+ +F +L +++C P +YFAK+
Sbjct: 338 IRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFAKV 517
Query: 783 LRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLS 962
LR A+ LGTD+ L+RVVVTR E D+ IK EY K+ K L A+ ++TSG+Y LL+
Sbjct: 518 LRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRKRTSKALEHAVAADTSGDYEELLLT 697
Query: 963 LVG 971
L+G
Sbjct: 698 LIG 706
Score = 91.3 bits (193), Expect(2) = 9e-045
Identities = 41/111 (36%), Positives = 68/111 (61%)
Frame = +3 / +2
Query: 267 LWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPSQLQIMKQTYYARFGTYLEHDIA 446
LW LDP RDA + E++ + + R+ EI +R+ ++L ++Q Y+ R+ LE D+A
Sbjct: 5 LWSLDPPERDALLSYESIKKWSPNNRSLLEISSARSSTELWSVRQAYHIRYKKSLEEDVA 184
Query: 447 HHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDLYKAGEKRLGTDEKI 599
HT GD +KLL+ + RYEGPEVD + +AK L++A + + +E++
Sbjct: 185 SHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIKDKAFGNEEL 337
>gb|DR102479.1|DR102479 STRR1_81_A06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_81_A06_A033 5', mRNA sequence
Length = 877
Score = 127 bits (271), Expect(2) = 3e-043
Identities = 55/126 (43%), Positives = 82/126 (65%)
Frame = +3 / +1
Query: 603 IRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKL 782
IR+ + RS A L + + Y +Y + K +KS+ +F+ A+ +++C P K+F K+
Sbjct: 235 IRIISTRSKAQLNATFNCYKDVYGHHINKDLKSQAPEDFQDAVRVVIKCICCPEKHFTKV 414
Query: 783 LRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLS 962
LR A++ LGTD+ L RVVVTR E+DM++IK Y K+ K L AI SETSG+Y+ FLL+
Sbjct: 415 LRLAIEKLGTDEDALTRVVVTRAEVDMKHIKEAYAKRTSKTLEHAIASETSGDYQDFLLT 594
Query: 963 LVGHGH 980
L+G H
Sbjct: 595 LIGKDH 612
Score = 69.8 bits (146), Expect(2) = 3e-043
Identities = 28/64 (43%), Positives = 45/64 (70%)
Frame = +3 / +1
Query: 366 SRTPSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHD 545
+R+ ++L + +Q Y+ R+ LE D+A HTSG+ +KLL+A + RYEGPEVD + +++
Sbjct: 1 ARSSAELLMARQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYE 180
Query: 546 AKDL 557
AK L
Sbjct: 181 AKKL 192
>gb|DR682440.1|DR682440 EST1072515 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA986, mRNA sequence
Length = 827
Score = 123 bits (263), Expect(2) = 2e-042
Identities = 53/126 (42%), Positives = 81/126 (64%)
Frame = +3 / -2
Query: 603 IRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKL 782
IR+ + RS A L + + Y Y + K +K++ +F+ A+ ++ C + K+F+K+
Sbjct: 574 IRIISTRSKAQLNATFNCYKDAYGHHINKALKTQVPEDFQDAVRVLINCICSTEKHFSKV 395
Query: 783 LRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLS 962
LR A+ GL TD+ L RVVVTR E+DM++IK Y K+ K L +AI S+TSG+YR FLL+
Sbjct: 394 LRLAIGGLRTDEDALTRVVVTRAEVDMKHIKEAYAKRTSKTLEQAIASDTSGDYREFLLT 215
Query: 963 LVGHGH 980
L+G H
Sbjct: 214 LIGKDH 197
Score = 70.7 bits (148), Expect(2) = 2e-042
Identities = 29/68 (42%), Positives = 46/68 (67%)
Frame = +3 / -2
Query: 354 EIICSRTPSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTI 533
EI +R+ ++L +++Q Y+ R+ LE D+A H SG+ +KLL+A + RYEGPEVD +
Sbjct: 820 EISSARSSAELLMVRQAYHIRYKKSLEEDVAEHISGNFRKLLVALVSSYRYEGPEVDMRL 641
Query: 534 VTHDAKDL 557
+ +AK L
Sbjct: 640 ASSEAKKL 617
>gb|DR079034.1|DR079034 RTFEPL1_8_C02.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_8_C02_A029 5', mRNA sequence
Length = 772
Score = 168 bits (361), Expect = 1e-040
Identities = 77/191 (40%), Positives = 113/191 (59%)
Frame = +3 / -2
Query: 393 MKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDLYKAGE 572
+++ Y R+ L+ D+ T+G QKLLLA + R E VD T DAK LY+A E
Sbjct: 771 IREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASE 592
Query: 573 KRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCA 752
R GTDE FIR+F+ER+ +HL ++ + Y Y + K +K ET FE A+ ++
Sbjct: 591 GRCGTDEDTFIRIFSERAVSHLHAIFACYKQEYGHDIMKGLKRETQKEFEEAIRVTIKSM 412
Query: 753 ENPAKYFAKLLRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSET 932
PA YFAK+L + MKGL D+ + RV+VTR E+D++ I Y +KYK + +A + E
Sbjct: 411 YLPANYFAKVLHRGMKGLLNDESAITRVMVTRAEVDLKEINVVYERKYKMSIVQAFHQEF 232
Query: 933 SGNYRTFLLSL 965
SG ++ F L+L
Sbjct: 231 SGYFKNFCLAL 199
>gb|DR058701.1|DR058701 RTNIT1_13_H07.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_13_H07_A029 3', mRNA sequence
Length = 640
Score = 167 bits (360), Expect = 1e-040
Identities = 80/197 (40%), Positives = 115/197 (58%)
Frame = +3 / -1
Query: 195 SMYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRT 374
+MY E+L R+ EL G +KA+ LW+ +PA RDA + AL G D RA E+IC+R+
Sbjct: 595 AMYKEDLCKRLEKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRS 416
Query: 375 PSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKD 554
+Q+ +++ Y R+ L+ D+ T+G QKLLLA + R E VD T DAK
Sbjct: 415 STQIVKIREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKM 236
Query: 555 LYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALL 734
LY+A E R GTDE FIR+F+ER+ + L ++ + Y Y + K +K ET FE A+
Sbjct: 235 LYEASEGRCGTDEDTFIRIFSERAVSQLHAIFACYKQEYGHDIMKGLKRETQKEFEEAIR 56
Query: 735 TILRCAENPAKYFAKLL 785
++ PA YFAK+L
Sbjct: 55 VTIKSMYLPANYFAKVL 5
>gb|CO370469.1|CO370469 RTK1_68_C11.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_68_C11_A029 3', mRNA sequence
Length = 858
Score = 109 bits (233), Expect(3) = 4e-040
Identities = 48/134 (35%), Positives = 83/134 (61%)
Frame = +3 / -2
Query: 198 MYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTP 377
+Y E+ R+ SEL+ + ++A+ LW LDP RDA + E++ + + R+ EI +R+
Sbjct: 608 LYEEDFLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSS 429
Query: 378 SQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
++L ++Q Y+ R+ LE D+A HT GD +KLL+ + RYEGPEVD + +AK L
Sbjct: 428 TELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQL 249
Query: 558 YKAGEKRLGTDEKI 599
++A + + +E++
Sbjct: 248 HEAIKDKAFGNEEL 207
Score = 49.6 bits (102), Expect(3) = 4e-040
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2 / -2
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M+++ +P P+P +D+ L KAF+G+G + I IL HR + QR I+Q Y
Sbjct: 773 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTY 615
Score = 45.1 bits (92), Expect(3) = 4e-040
Identities = 23/68 (33%), Positives = 37/68 (54%)
Frame = +3 / -2
Query: 603 IRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKL 782
IR+ T RS A L + + Y Y + K +K+ +F +L +++C P +YFAK+
Sbjct: 206 IRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESL*IVIKCICFPERYFAKV 27
Query: 783 LRKAMKGL 806
LR A+ L
Sbjct: 26 LRLAIDKL 3
>gb|DR071668.1|DR071668 RTDK1_21_H06.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_21_H06_A029 3', mRNA sequence
Length = 712
Score = 127 bits (271), Expect(2) = 8e-040
Identities = 55/126 (43%), Positives = 82/126 (65%)
Frame = +3 / +1
Query: 603 IRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKL 782
IR+ + RS A L + + Y +Y + K +KS+ +F+ A+ +++C P K+F K+
Sbjct: 193 IRIISTRSKAQLNATFNCYKDVYGHHINKDLKSQAPEDFQDAVRVVIKCICCPEKHFTKV 372
Query: 783 LRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLS 962
LR A++ LGTD+ L RVVVTR E+DM++IK Y K+ K L AI SETSG+Y+ FLL+
Sbjct: 373 LRLAIEKLGTDEDALTRVVVTRAEVDMKHIKEAYAKRTSKTLEHAIASETSGDYQDFLLT 552
Query: 963 LVGHGH 980
L+G H
Sbjct: 553 LIGKDH 570
Score = 58.3 bits (121), Expect(2) = 8e-040
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +3 / +1
Query: 408 YARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
+ R+ LE D+A HTSG+ +KLL+A + RYEGPEVD + +++AK L
Sbjct: 1 HIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEAKKL 150
>gb|DR110698.1|DR110698 RTS1_12_A01.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_12_A01_A029 5', mRNA sequence
Length = 753
Score = 108 bits (231), Expect(2) = 2e-039
Identities = 48/134 (35%), Positives = 83/134 (61%)
Frame = +3 / +2
Query: 198 MYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTP 377
+Y E+ R+ SEL+ + ++A+ LW LDP RDA + E++ + + R+ EI +R+
Sbjct: 77 LYEEDFLKRLQSELTRDFERALLLWSLDPPQRDALLAYESIKKWSPNNRSLLEISSARSS 256
Query: 378 SQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
++L ++Q Y+ R+ LE D+A HT GD +KLL+ + RYEGPEVD + +AK L
Sbjct: 257 TELWAVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLGKAEAKQL 436
Query: 558 YKAGEKRLGTDEKI 599
++A + + +E++
Sbjct: 437 HEAIKDKAFGNEEL 478
Score = 75.3 bits (158), Expect(2) = 2e-039
Identities = 37/91 (40%), Positives = 53/91 (58%)
Frame = +3 / +2
Query: 603 IRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKL 782
IR+ T RS A L + + Y Y + K +K+ +F +L ++C P +YFAK+
Sbjct: 479 IRIITTRSKAQLTATFNYYKDDYGHHINKDLKNGKPEDFLESLRIDIKCICFPERYFAKV 658
Query: 783 LRKAMKGLGTDDMTLIRVVVTRTEIDMQYIK 875
LR A+ LGTD+ L+RVVVTR E D+ IK
Sbjct: 659 LRLAIDKLGTDEEALMRVVVTRAETDLSNIK 751
>gb|CO200735.1|CO200735 RTCNT2_1_E08.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_1_E08_A029 3', mRNA sequence
Length = 802
Score = 163 bits (351), Expect = 2e-039
Identities = 76/190 (40%), Positives = 111/190 (58%)
Frame = +3 / +1
Query: 396 KQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDLYKAGEK 575
++ Y R+ L+ D+ T+G QKLLLA + R E VD T DAK LY+A E
Sbjct: 1 REAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEG 180
Query: 576 RLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAE 755
R GTDE FIR+F+ER+ + L ++ + Y Y + K +K ET FE A+ ++
Sbjct: 181 RCGTDEDTFIRIFSERAVSQLHAIFACYKQEYGHDIMKGLKRETQKEFEEAIRVTIKSMY 360
Query: 756 NPAKYFAKLLRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETS 935
PA YFAK+L + MKGL D+ + RV+VTR E+D++ I Y +KYK + +A + E S
Sbjct: 361 LPANYFAKVLHRGMKGLLNDESAITRVMVTRAEVDLKEINVVYERKYKMSIVQAFHREFS 540
Query: 936 GNYRTFLLSL 965
G ++ F L+L
Sbjct: 541 GYFKNFCLAL 570
>gb|CO200810.1|CO200810 RTCNT2_1_E08.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_1_E08_A029 5', mRNA sequence
Length = 765
Score = 161 bits (346), Expect = 1e-038
Identities = 77/193 (39%), Positives = 111/193 (57%)
Frame = +3 / +3
Query: 195 SMYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRT 374
+MY E+L R+ EL G +KA+ LW+ +PA RDA + AL G D RA E+IC+R+
Sbjct: 186 AMYKEDLCKRLEKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRS 365
Query: 375 PSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKD 554
+Q+ +++ Y R+ L+ D+ T+G QKLLLA + R E VD T DAK
Sbjct: 366 STQIVKIREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKM 545
Query: 555 LYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALL 734
LY+A E R GTDE FIR+F+ER+ + L ++ + Y Y + K +K ET FE A+
Sbjct: 546 LYEASEGRCGTDEDTFIRIFSERAVSQLHAIFACYKQEYGHDIMKGLKRETQKEFEEAIR 725
Query: 735 TILRCAENPAKYF 773
++ PA YF
Sbjct: 726 VTIKSMYLPANYF 764
>gb|DR050421.1|DR050421 RTBOR1_23_H07.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_23_H07_A029 3', mRNA sequence
Length = 787
Score = 160 bits (345), Expect = 2e-038
Identities = 75/184 (40%), Positives = 108/184 (58%)
Frame = +3 / +1
Query: 414 RFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDLYKAGEKRLGTDE 593
R+ L+ D+ T+G QKLLLA + R E VD T DAK LY+A E R GTDE
Sbjct: 1 RYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITXARCDAKMLYEASEGRCGTDE 180
Query: 594 KIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYF 773
FIR+F+ER+ + L ++ + Y Y + K +K ET FE A+ ++ PA YF
Sbjct: 181 DTFIRIFSERAVSQLHAIFACYKQEYGHDIMKGLKRETQKEFEEAIRVTIKSMYLPANYF 360
Query: 774 AKLLRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETSGNYRTF 953
AK+L + MKGL D+ + RV+VTR E+D++ I Y +KYK + +A + E SG ++ F
Sbjct: 361 AKVLHRGMKGLLNDESAITRVMVTRAEVDLKEINVVYERKYKMSIVQAFHQEFSGYFKNF 540
Query: 954 LLSL 965
L+L
Sbjct: 541 CLAL 552
>gb|DR110618.1|DR110618 RTS1_12_A01.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_12_A01_A029 3', mRNA sequence
Length = 835
Score = 110 bits (235), Expect(2) = 2e-038
Identities = 51/123 (41%), Positives = 75/123 (60%)
Frame = +3 / +3
Query: 603 IRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKL 782
IR+ T RS A L + + Y Y + K +K+ +F +L +++C P +YFAK+
Sbjct: 240 IRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFAKV 419
Query: 783 LRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLS 962
LR A+ LGTD+ L+RVVVTR E D+ IK EY K+ K L A+ ++TSG+Y LL+
Sbjct: 420 LRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRKRTSKALEHAVAADTSGDYEELLLT 599
Query: 963 LVG 971
L+G
Sbjct: 600 LIG 608
Score = 69.8 bits (146), Expect(2) = 2e-038
Identities = 29/78 (37%), Positives = 50/78 (64%)
Frame = +3 / +3
Query: 366 SRTPSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHD 545
+R+ ++L ++Q Y+ R+ LE D+A HT GD +KLL+ + RYEGPEVD + +
Sbjct: 6 ARSSTELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAE 185
Query: 546 AKDLYKAGEKRLGTDEKI 599
AK L++A + + +E++
Sbjct: 186 AKQLHEAIKDKAFGNEEL 239
>gb|DR052711.1|DR052711 RTCA1_6_H10.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_6_H10_A029 3', mRNA sequence
Length = 767
Score = 158 bits (340), Expect = 8e-038
Identities = 74/179 (41%), Positives = 106/179 (59%)
Frame = +3 / +1
Query: 429 LEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDLYKAGEKRLGTDEKIFIR 608
L+ D+ T+G QKLLLA + R E VD T DAK LY+A E R GTDE FIR
Sbjct: 10 LDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGTDEDTFIR 189
Query: 609 VFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKLLR 788
+F+ER+ + L ++ + Y Y + K +K ET FE A+ ++ PA YFAK+L
Sbjct: 190 IFSERAVSQLHAIFACYKQEYGHDIMKGLKRETQKEFEEAIRVTIKSMYLPANYFAKVLH 369
Query: 789 KAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLSL 965
+ MKGL D+ + RV+VTR E+D++ I Y +KYK + +A + E SG ++ F L+L
Sbjct: 370 RGMKGLLNDESAITRVMVTRAEVDLKEINVVYERKYKMSIVQAFHQEFSGYFKNFCLAL 546
>gb|DR117549.1|DR117549 RTMG1_7_D09.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_D09_A029 5', mRNA sequence
Length = 898
Score = 110 bits (235), Expect(2) = 2e-037
Identities = 51/123 (41%), Positives = 75/123 (60%)
Frame = +3 / -1
Query: 603 IRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKL 782
IR+ T RS A L + + Y Y + K +K+ +F +L +++C P +YFAK+
Sbjct: 679 IRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFAKV 500
Query: 783 LRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLS 962
LR A+ LGTD+ L+RVVVTR E D+ IK EY K+ K L A+ ++TSG+Y LL+
Sbjct: 499 LRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRKRTSKALEHAVAADTSGDYEELLLT 320
Query: 963 LVG 971
L+G
Sbjct: 319 LIG 311
Score = 66.6 bits (139), Expect(2) = 2e-037
Identities = 28/73 (38%), Positives = 46/73 (63%)
Frame = +3 / -1
Query: 381 QLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDLY 560
+L ++Q Y+ R+ LE D+A HT GD +KLL+ + RYEGPEVD + +AK L+
Sbjct: 898 ELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLH 719
Query: 561 KAGEKRLGTDEKI 599
+A + + +E++
Sbjct: 718 EAIKDKAFGNEEL 680
>gb|DR118532.1|DR118532 RTMG1_17_C11.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_C11_A029 5', mRNA sequence
Length = 842
Score = 110 bits (235), Expect(2) = 2e-037
Identities = 51/123 (41%), Positives = 75/123 (60%)
Frame = +3 / -1
Query: 603 IRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKL 782
IR+ T RS A L + + Y Y + K +K+ +F +L +++C P +YFAK+
Sbjct: 623 IRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFAKV 444
Query: 783 LRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLS 962
LR A+ LGTD+ L+RVVVTR E D+ IK EY K+ K L A+ ++TSG+Y LL+
Sbjct: 443 LRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRKRTSKALEHAVAADTSGDYEELLLT 264
Query: 963 LVG 971
L+G
Sbjct: 263 LIG 255
Score = 66.6 bits (139), Expect(2) = 2e-037
Identities = 28/73 (38%), Positives = 46/73 (63%)
Frame = +3 / -1
Query: 381 QLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDLY 560
+L ++Q Y+ R+ LE D+A HT GD +KLL+ + RYEGPEVD + +AK L+
Sbjct: 842 ELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLH 663
Query: 561 KAGEKRLGTDEKI 599
+A + + +E++
Sbjct: 662 EAIKDKAFGNEEL 624
>gb|CF393700.1|CF393700 RTDR3_15_G09.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_15_G09_A022 5', mRNA
sequence
Length = 785
Score = 155 bits (332), Expect = 1e-036
Identities = 75/192 (39%), Positives = 109/192 (56%)
Frame = +3 / +1
Query: 195 SMYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRT 374
+MY E+L R+ EL G +KA+ LW+ +PA RDA + AL G D A E+IC+R+
Sbjct: 208 AMYKEDLCKRLEKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDCALIEVICTRS 387
Query: 375 PSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKD 554
+Q+ +++ Y R+ L+ D+ T+G QKLLLA + R E VD T DAK
Sbjct: 388 STQIVKIREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKM 567
Query: 555 LYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALL 734
LY+A E R GTDE FIR+F+ER+ + L ++ + Y Y + K +K ET FE A+
Sbjct: 568 LYEASEGRCGTDEDTFIRIFSERAVSQLHAIFACYKQEYGHDIMKGLKRETQKEFEEAIR 747
Query: 735 TILRCAENPAKY 770
++ PA Y
Sbjct: 748 VTIKSMYLPANY 783
>gb|CO171645.1|CO171645 NDL1_23_A05.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_23_A05_A029 5', mRNA sequence
Length = 728
Score = 153 bits (329), Expect = 3e-036
Identities = 73/184 (39%), Positives = 107/184 (58%)
Frame = +3 / +2
Query: 195 SMYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRT 374
+MY E+L R+ EL G +KA+ LW+ +PA RDA + AL G D RA E+IC+R+
Sbjct: 164 AMYKEDLCKRLEKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRS 343
Query: 375 PSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKD 554
+Q+ +++ Y R+ L+ D+ T+G QKLLLA + R E VD T DAK
Sbjct: 344 STQIVKIREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKM 523
Query: 555 LYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALL 734
LY+A E R GTDE FIR+F+ER+ + L ++ + Y Y + K +K ET FE A+
Sbjct: 524 LYEASEGRCGTDEDTFIRIFSERAVSQLHAIFACYKQEYGHDIMKGLKRETQKGFEEAIR 703
Query: 735 TILR 746
++
Sbjct: 704 VTIK 715
>gb|DR050495.1|DR050495 RTBOR1_23_H07.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_23_H07_A029 5', mRNA sequence
Length = 724
Score = 153 bits (329), Expect = 3e-036
Identities = 73/184 (39%), Positives = 107/184 (58%)
Frame = +3 / +2
Query: 195 SMYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRT 374
+MY E+L R+ EL G +KA+ LW+ +PA RDA + AL G D RA E+IC+R+
Sbjct: 170 AMYKEDLCKRLEKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRS 349
Query: 375 PSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKD 554
+Q+ +++ Y R+ L+ D+ T+G QKLLLA + R E VD T DAK
Sbjct: 350 STQIVKIREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKM 529
Query: 555 LYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALL 734
LY+A E R GTDE FIR+F+ER+ + L ++ + Y Y + K +K ET FE A+
Sbjct: 530 LYEASEGRCGTDEDTFIRIFSERAVSQLHAIFACYKQEYGHDIMKGLKRETQKEFEEAIR 709
Query: 735 TILR 746
++
Sbjct: 710 VTIK 721
>dbj|BD236037.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 789
Score = 111 bits (238), Expect(2) = 5e-036
Identities = 50/121 (41%), Positives = 75/121 (61%)
Frame = +3 / +1
Query: 201 YHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPS 380
Y E+L + ELS + ++++ LW LDPA RDA + EA T EI C+R+
Sbjct: 241 YGEDLLKALDKELSSDFERSVLLWTLDPAERDAFLSNEATKRLTSSNWVLMEIACTRSSM 420
Query: 381 QLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDLY 560
+L +++Q Y+AR+ LE DIA+HT+GD +KLL+ RYEGPEV+ T+ +AK L+
Sbjct: 421 ELFMVRQAYHARYKKSLEEDIAYHTTGDFRKLLVPLASTFRYEGPEVNMTLARSEAKILH 600
Query: 561 K 563
+
Sbjct: 601 E 603
Score = 60.6 bits (126), Expect(2) = 5e-036
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +2 / +1
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
MA++ +PP+ P+P +DA L KAF G+G + I+IL HR++ QR +I+Q Y
Sbjct: 73 MATIAVPPSVPSPAEDAEQLQKAFAGWGTNEDLIISILPHRNAAQRKVIRQTY 231
>gb|DR070146.1|DR070146 RTDK1_11_C07.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_11_C07_A029 5', mRNA sequence
Length = 710
Score = 149 bits (321), Expect = 3e-035
Identities = 70/166 (42%), Positives = 99/166 (59%)
Frame = +3 / -2
Query: 468 QKLLLAYMGIPRYEGPEVDPTIVTHDAKDLYKAGEKRLGTDEKIFIRVFTERSWAHLASV 647
QKLLLA + R E VD T DAK LY+A E R GTDE FIR+F+ER+ + L ++
Sbjct: 703 QKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGTDEDTFIRIFSERAVSQLHAI 524
Query: 648 SSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKLLRKAMKGLGTDDMTL 827
+ Y Y + K +K ET FE A+ ++ PA YFAK+L + MKGL D+ +
Sbjct: 523 FACYKQEYGHDIMKGLKRETQKEFEEAIRVTIKSMYLPANYFAKVLHRGMKGLLNDESAI 344
Query: 828 IRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLSL 965
RV+VTR E+D++ I Y +KYK + +A + E SG ++ F L+L
Sbjct: 343 TRVMVTRAEVDLKEINVVYERKYKMSIVQAFHQEFSGYFKNFCLAL 206
>gb|DR047558.1|DR047558 RTBOR1_1_H09.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_1_H09_A029 5', mRNA sequence
Length = 698
Score = 149 bits (319), Expect = 6e-035
Identities = 70/170 (41%), Positives = 101/170 (59%)
Frame = +3 / +2
Query: 195 SMYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRT 374
+MY E+L R+ EL G +KA+ LW+ +PA RDA + AL G D RA E+IC+R+
Sbjct: 188 AMYKEDLCKRLEKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRS 367
Query: 375 PSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKD 554
+Q+ +++ Y R+ L+ D+ T+G QKLLLA + R E VD T DAK
Sbjct: 368 STQIVKIREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKM 547
Query: 555 LYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSE 704
LY+A E R GTDE FIR+F+ER+ +HL ++ + Y Y + K +K E
Sbjct: 548 LYEASEGRCGTDEDTFIRIFSERAVSHLHAIFACYKQEYGHDIMKGLKRE 697
>gb|DR056919.1|DR056919 RTNIT1_1_H10.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_1_H10_A029 3', mRNA sequence
Length = 736
Score = 149 bits (319), Expect = 6e-035
Identities = 70/170 (41%), Positives = 101/170 (59%)
Frame = +3 / -2
Query: 195 SMYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRT 374
+MY E+L R+ EL G +KA+ LW+ +PA RDA + AL G D RA E+IC+R+
Sbjct: 510 AMYKEDLCKRLEKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRS 331
Query: 375 PSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKD 554
+Q+ +++ Y R+ L+ D+ T+G QKLLLA + R E VD T DAK
Sbjct: 330 STQIVKIREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKM 151
Query: 555 LYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSE 704
LY+A E R GTDE FIR+F+ER+ +HL ++ + Y Y + K +K E
Sbjct: 150 LYEASEGRCGTDEDTFIRIFSERAVSHLHAIFACYKQEYGHDIMKGLKRE 1
>gb|CF394019.1|CF394019 RTDS2_2_B12.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_2_B12_A021 5', mRNA sequence
Length = 726
Score = 147 bits (316), Expect = 2e-034
Identities = 70/171 (40%), Positives = 101/171 (59%)
Frame = +3 / +3
Query: 195 SMYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRT 374
+MY E+L R+ EL G +KA+ LW+ +PA RDA + AL G D RA E+IC+R+
Sbjct: 210 AMYKEDLCKRLEKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRS 389
Query: 375 PSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKD 554
+Q+ +++ Y R+ L+ D+ T+G QKLLLA + R E VD T DAK
Sbjct: 390 STQIVKIREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKM 569
Query: 555 LYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSET 707
LY+A E R GTDE FIR+F+ER+ + L ++ + Y Y + K +K ET
Sbjct: 570 LYEASEGRCGTDEDTFIRIFSERAVSQLHAIFACYKQEYGHDIMKGLKRET 722
>gb|DR688160.1|DR688160 EST1078244 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC193 3' end, mRNA sequence
Length = 797
Score = 115 bits (246), Expect(2) = 3e-034
Identities = 50/120 (41%), Positives = 78/120 (65%)
Frame = +3 / +2
Query: 198 MYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTP 377
+Y E+L R+ SELS + +KA+ LW+LDPA RDA + A+ + EI +R+
Sbjct: 236 LYEEDLLKRLESELSSDFEKAVFLWVLDPAERDAVISHGAIKKWNAKNISLLEISSARSS 415
Query: 378 SQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
++L +++Q Y+ R+ LE D+A HTSG+ +KLL+A + RYEGPEVD + +++AK L
Sbjct: 416 AELLMVRQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEAKKL 595
Score = 51.0 bits (105), Expect(2) = 3e-034
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +2 / +2
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M+++ +P P P +D+ L KAF+G+G + + I IL HR + QR +I+Q Y
Sbjct: 71 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSY 229
>gb|DR682092.1|DR682092 EST1072167 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA667 3' end, mRNA sequence
Length = 770
Score = 138 bits (297), Expect(2) = 3e-034
Identities = 65/174 (37%), Positives = 96/174 (55%)
Frame = +3 / +2
Query: 195 SMYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRT 374
++Y E++S + +EL GN +KA+ LW+ DPA R A + + L D RA TEI+CSRT
Sbjct: 209 ALYKEDISTFLHAELCGNLQKAVVLWMHDPAERVAIIAKTELMSQYPDFRALTEILCSRT 388
Query: 375 PSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKD 554
P+++ +++ Y + LE DIA T G HQKLL A R +V+ DAK
Sbjct: 389 PAEILRIREAYRRLYKVCLEEDIAQETVGPHQKLLFALAKAQRCPSRDVNICQAKCDAKR 568
Query: 555 LYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGN 716
LY A E R+G DE +++ +ER+ HL + Y Y + K ++ E GN
Sbjct: 569 LYGAREGRIGIDEGAIVKLLSERNLNHLRAAFGCYKQFYGHDILKALRREHLGN 730
Score = 27.6 bits (54), Expect(2) = 3e-034
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 693 IKSETSGNFEFALLTILRC 749
I+ TSG FE+AL I++C
Sbjct: 706 IEEGTSGKFEYALRIIIKC 762
>gb|DR071753.1|DR071753 RTDK1_21_H06.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_21_H06_A029 5', mRNA sequence
Length = 712
Score = 115 bits (246), Expect(2) = 3e-034
Identities = 50/120 (41%), Positives = 78/120 (65%)
Frame = +3 / +1
Query: 198 MYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTP 377
+Y E+L R+ SELS + +KA+ LW+LDPA RDA + A+ + EI +R+
Sbjct: 208 LYEEDLLKRLESELSSDFEKAVFLWVLDPAERDAVISHGAIKKWNAKNISLLEISSARSS 387
Query: 378 SQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
++L +++Q Y+ R+ LE D+A HTSG+ +KLL+A + RYEGPEVD + +++AK L
Sbjct: 388 AELLMVRQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEAKKL 567
Score = 51.0 bits (105), Expect(2) = 3e-034
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +2 / +1
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M+++ +P P P +D+ L KAF+G+G + + I IL HR + QR +I+Q Y
Sbjct: 43 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSY 201
>dbj|BD236038.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 704
Score = 115 bits (246), Expect(2) = 3e-034
Identities = 50/120 (41%), Positives = 78/120 (65%)
Frame = +3 / +1
Query: 198 MYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTP 377
+Y E+L R+ SELS + +KA+ LW+LDPA RDA + A+ + EI +R+
Sbjct: 313 LYEEDLLKRLESELSSDFEKAVFLWVLDPAERDAVISHGAIKKWNAKNISLLEISSARSS 492
Query: 378 SQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
++L +++Q Y+ R+ LE D+A HTSG+ +KLL+A + RYEGPEVD + +++AK L
Sbjct: 493 AELLMVRQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEAKKL 672
Score = 51.0 bits (105), Expect(2) = 3e-034
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +2 / +1
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M+++ +P P P +D+ L KAF+G+G + + I IL HR + QR +I+Q Y
Sbjct: 148 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSY 306
>gb|DR090287.1|DR090287 RTAL1_14_B08.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_14_B08_A029 3', mRNA sequence
Length = 735
Score = 145 bits (311), Expect = 8e-034
Identities = 69/171 (40%), Positives = 100/171 (58%)
Frame = +3 / -1
Query: 195 SMYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRT 374
+MY E+L R+ EL G +KA+ LW+ +PA RDA + AL G D RA E+IC+R+
Sbjct: 516 AMYKEDLCKRLEKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRS 337
Query: 375 PSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKD 554
+Q+ +++ Y R+ L+ D+ T+G QKLLLA + E VD T DAK
Sbjct: 336 STQIVKIREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAH*CECKGVDITKARCDAKM 157
Query: 555 LYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSET 707
LY+ E R GTDE FIR+F+ER+ +HL ++ + Y Y + K +K ET
Sbjct: 156 LYEVSEGRCGTDEDTFIRIFSERAVSHLHAIFACYKQEYGHDIMKGLKRET 4
>dbj|BD236002.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 704
Score = 112 bits (240), Expect(2) = 2e-033
Identities = 50/120 (41%), Positives = 77/120 (64%)
Frame = +3 / +1
Query: 198 MYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTP 377
+Y E+L R+ SELS + +KA+ LW+LDPA RDA + A+ + EI +R+
Sbjct: 313 LYEEDLLKRLESELSSDFEKAVFLWVLDPAERDAVISHGAIKKWNAKNISLLEISSARSS 492
Query: 378 SQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
++L +++Q Y+ R LE D+A HTSG+ +KLL+A + RYEGPEVD + +++AK L
Sbjct: 493 AELLMVRQAYHIRDKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEAKKL 672
Score = 51.0 bits (105), Expect(2) = 2e-033
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +2 / +1
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M+++ +P P P +D+ L KAF+G+G + + I IL HR + QR +I+Q Y
Sbjct: 148 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSY 306
>gb|DN611386.1|DN611386 EST964436 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAB144, mRNA sequence
Length = 889
Score = 144 bits (308), Expect = 2e-033
Identities = 66/175 (37%), Positives = 99/175 (56%)
Frame = +3 / +3
Query: 336 DLRAATEIICSRTPSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGP 515
D RA TEI+CSRTP+++ +++ Y + LE DIA T G HQKLL A R
Sbjct: 6 DFRALTEILCSRTPAEILRIREAYRRLYKVCLEEDIAQETVGPHQKLLFALAKAQRCPSR 185
Query: 516 EVDPTIVTHDAKDLYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVI 695
+V+ DAK LY A E R+G DE +++ +ER+ HL + Y Y + K +
Sbjct: 186 DVNICQAKCDAKRLYGAREGRIGIDEGAIVKLLSERNLNHLRAAFGYYKQFYGHDILKAL 365
Query: 696 KSETSGNFEFALLTILRCAENPAKYFAKLLRKAMKGLGTDDMTLIRVVVTRTEID 860
+ ETSG FE+AL I++C PAKYF+K+LR ++ L + +T + V +++
Sbjct: 366 RRETSGKFEYALRIIIKCICYPAKYFSKVLRISLDQLEYEALTRVMVTRAEVDME 530
>gb|CF474706.1|CF474706 RTWW2_7_D09.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_7_D09_A021 5', mRNA sequence
Length = 695
Score = 143 bits (307), Expect = 3e-033
Identities = 68/168 (40%), Positives = 99/168 (58%)
Frame = +3 / +3
Query: 195 SMYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRT 374
+MY E+L R+ EL G +KA+ LW+ +PA RDA + AL G D RA E+IC+R+
Sbjct: 192 AMYKEDLCKRLEKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRS 371
Query: 375 PSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKD 554
+Q+ +++ Y R+ L+ D+ T+G QKLLLA + R E VD T DAK
Sbjct: 372 STQIVKIREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKM 551
Query: 555 LYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIK 698
LY+A E R GTDE FIR+F+ER+ + L ++ + Y Y + K +K
Sbjct: 552 LYEASEGRCGTDEDTFIRIFSERAVSQLHAIFACYKQEYGHDIMKGLK 695
>gb|CF475175.1|CF475175 RTWW2_14_F07.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_14_F07_A021 5', mRNA sequence
Length = 684
Score = 143 bits (307), Expect = 3e-033
Identities = 68/170 (40%), Positives = 100/170 (58%)
Frame = +3 / +3
Query: 195 SMYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRT 374
+MY E+L R+ EL G +KA+ LW+ +PA RDA + AL G D RA E+IC+R+
Sbjct: 174 AMYKEDLCKRLEKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRS 353
Query: 375 PSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKD 554
+Q+ +++ Y R+ L+ D+ T+G QKLLLA + R E VD T DA+
Sbjct: 354 STQIVKIREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAEM 533
Query: 555 LYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSE 704
LY+A E R GTDE FIR+F+ER+ + L ++ + Y Y + K +K E
Sbjct: 534 LYEASEGRCGTDEDTFIRIFSERAVSQLHAIFACYKQEYGHDIMKGLKRE 683
>gb|CX653225.1|CX653225 COLD1_64_E08.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_64_E08_A029 3', mRNA sequence
Length = 717
Score = 143 bits (307), Expect = 3e-033
Identities = 65/155 (41%), Positives = 93/155 (60%)
Frame = +3 / +3
Query: 501 RYEGPEVDPTIVTHDAKDLYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRK 680
R E VD T DAK LY+A E R GTDE FIR+F+ER+ +HL ++ + Y Y
Sbjct: 21 RCECKGVDITKARCDAKMLYEASEGRCGTDEDTFIRIFSERAVSHLHAIFACYKQEYGHD 200
Query: 681 LEKVIKSETSGNFEFALLTILRCAENPAKYFAKLLRKAMKGLGTDDMTLIRVVVTRTEID 860
+ K +K ET FE A+ ++ PA YFAK+L + MKGL D+ + RV+VTR E+D
Sbjct: 201 IMKGLKRETQKEFEEAIRVTIKSMYLPANYFAKVLHRGMKGLLNDESAITRVMVTRAEVD 380
Query: 861 MQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLSL 965
++ I Y +KYK + +A + E SG ++ F L+L
Sbjct: 381 LKEINVVYERKYKMSIVQAFHQEFSGYFKNFCLAL 485
>gb|DR047494.1|DR047494 RTBOR1_1_H09.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_1_H09_A029 3', mRNA sequence
Length = 750
Score = 143 bits (307), Expect = 3e-033
Identities = 65/155 (41%), Positives = 93/155 (60%)
Frame = +3 / +1
Query: 501 RYEGPEVDPTIVTHDAKDLYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRK 680
R E VD T DAK LY+A E R GTDE FIR+F+ER+ +HL ++ + Y Y
Sbjct: 13 RCECKGVDITKARCDAKMLYEASEGRCGTDEDTFIRIFSERAVSHLHAIFACYKQEYGHD 192
Query: 681 LEKVIKSETSGNFEFALLTILRCAENPAKYFAKLLRKAMKGLGTDDMTLIRVVVTRTEID 860
+ K +K ET FE A+ ++ PA YFAK+L + MKGL D+ + RV+VTR E+D
Sbjct: 193 IMKGLKRETQKEFEEAIRVTIKSMYLPANYFAKVLHRGMKGLLNDESAITRVMVTRAEVD 372
Query: 861 MQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLSL 965
++ I Y +KYK + +A + E SG ++ F L+L
Sbjct: 373 LKEINVVYERKYKMSIVQAFHQEFSGYFKNFCLAL 477
>gb|CR354730.1|CR354730 CR354730 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 125F06, mRNA sequence
Length = 702
Score = 111 bits (236), Expect(2) = 2e-032
Identities = 47/123 (38%), Positives = 77/123 (62%)
Frame = +3 / +1
Query: 198 MYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTP 377
+Y E+ R+ SEL+ + ++A+ LW LDP RDA + E++ + + R+ EI +R+
Sbjct: 328 LYEEDFLKRLQSELTRDFERALLLWSLDPPERDALLAHESIKKWSPNNRSLLEISSARSS 507
Query: 378 SQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
++L ++Q Y+ R+ LE D+A HT GD +KLL+ + RYEGPEVD + +AK L
Sbjct: 508 TELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSHRYEGPEVDTRLAKSEAKQL 687
Query: 558 YKA 566
++A
Sbjct: 688 HEA 696
Score = 49.6 bits (102), Expect(2) = 2e-032
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2 / +1
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M+++ +P P+P +D+ L KAF+G+G + I IL HR + QR I+Q Y
Sbjct: 163 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTY 321
>gb|CF473280.1|CF473280 RTWW2_1_H04.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_1_H04_A021 5', mRNA sequence
Length = 685
Score = 140 bits (300), Expect = 3e-032
Identities = 66/159 (41%), Positives = 95/159 (59%)
Frame = +3 / +3
Query: 195 SMYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRT 374
+MY E+L R+ EL G +KA+ LW+ +PA RDA + AL G D RA E+IC+R+
Sbjct: 195 AMYKEDLCKRLEKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRS 374
Query: 375 PSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKD 554
+Q+ +++ Y R+ L+ D+ T+G QKLLLA + R E VD T DAK
Sbjct: 375 STQIVKIREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKM 554
Query: 555 LYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMY 671
LY+A E R GTDE FIR+F+ER+ + L ++ + Y Y
Sbjct: 555 LYEASEGRCGTDEDTFIRIFSERAVSQLHAIFACYKQEY 671
>gb|DR177124.1|DR177124 RTMNUT1_3_G01.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_3_G01_A029 3', mRNA sequence
Length = 697
Score = 140 bits (300), Expect = 3e-032
Identities = 66/159 (41%), Positives = 95/159 (59%)
Frame = +3 / -1
Query: 195 SMYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRT 374
+MY E+L R+ EL G +KA+ LW+ +PA RDA + AL G D RA E+IC+R+
Sbjct: 481 AMYKEDLCKRLEKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRS 302
Query: 375 PSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKD 554
+Q+ +++ Y R+ L+ D+ T+G QKLLLA + R E VD T DAK
Sbjct: 301 STQIVKIREAYQKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKM 122
Query: 555 LYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMY 671
LY+A E R GTDE FIR+F+ER+ + L ++ + Y Y
Sbjct: 121 LYEASEGRCGTDEDTFIRIFSERAVSQLHAIFACYKQEY 5
>dbj|BD236005.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 2132
Score = 110 bits (234), Expect(2) = 3e-032
Identities = 48/134 (35%), Positives = 83/134 (61%)
Frame = +3 / +2
Query: 198 MYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTP 377
+Y E+ R+ SEL+ + ++A+ LW LDP RDA + E++ + + R+ EI +R+
Sbjct: 1538 LYEEDFLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSS 1717
Query: 378 SQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
++L ++Q Y+ R+ LE D+A HT GD +KLL+ + RYEGPEVD + +AK L
Sbjct: 1718 TELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKSEAKQL 1897
Query: 558 YKAGEKRLGTDEKI 599
++A + + +E++
Sbjct: 1898 HEAIKDKAFGNEEL 1939
Score = 110 bits (234), Expect(3) = 6e-032
Identities = 48/134 (35%), Positives = 83/134 (61%)
Frame = +3 / +2
Query: 198 MYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTP 377
+Y E+ R+ SEL+ + ++A+ LW LDP RDA + E++ + + R+ EI +R+
Sbjct: 473 LYEEDFLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSS 652
Query: 378 SQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
++L ++Q Y+ R+ LE D+A HT GD +KLL+ + RYEGPEVD + +AK L
Sbjct: 653 TELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKSEAKQL 832
Query: 558 YKAGEKRLGTDEKI 599
++A + + +E++
Sbjct: 833 HEAIKDKAFGNEEL 874
Score = 49.6 bits (102), Expect(2) = 3e-032
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2 / +2
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M+++ +P P+P +D+ L KAF+G+G + I IL HR + QR I+Q Y
Sbjct: 1373 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTY 1531
Score = 38.6 bits (78), Expect(3) = 6e-032
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3 / +2
Query: 573 KRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTIL 743
K+ + + + + + RS L SV AYH Y + LE+ + S T G+F L+ ++
Sbjct: 1661 KKWSPNNRSLLEISSARSSTELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLV 1831
Score = 36.8 bits (74), Expect(3) = 6e-032
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2 / +3
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTH 151
M+++ +P P+P +D+ L KAF+G+G + I IL H
Sbjct: 306 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGH 425
>gb|CF393636.1|CF393636 RTDR3_15_C10.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_15_C10_A022 5', mRNA
sequence
Length = 670
Score = 109 bits (233), Expect(2) = 5e-032
Identities = 48/134 (35%), Positives = 83/134 (61%)
Frame = +3 / +2
Query: 198 MYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTP 377
+Y E+ R+ SEL+ + ++A+ LW LDP RDA + E++ + + R+ EI +R+
Sbjct: 188 LYEEDFLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSS 367
Query: 378 SQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
++L ++Q Y+ R+ LE D+A HT GD +KLL+ + RYEGPEVD + +AK L
Sbjct: 368 TELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQL 547
Query: 558 YKAGEKRLGTDEKI 599
++A + + +E++
Sbjct: 548 HEAIKDKAFGNEEL 589
Score = 49.6 bits (102), Expect(2) = 5e-032
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2 / +2
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M+++ +P P+P +D+ L KAF+G+G + I IL HR + QR I+Q Y
Sbjct: 23 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTY 181
>gb|CF390271.1|CF390271 RTDR2_18_E10.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_18_E10_A021 5', mRNA
sequence
Length = 685
Score = 109 bits (232), Expect(2) = 6e-032
Identities = 47/123 (38%), Positives = 77/123 (62%)
Frame = +3 / +3
Query: 198 MYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTP 377
+Y E+ R+ SEL+ + ++A+ LW LDP RDA + E++ + + R+ EI +R+
Sbjct: 294 LYEEDFLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSS 473
Query: 378 SQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
++L ++Q Y+ R+ LE D+A HT GD +KLL+ + RYEGPEVD + +AK L
Sbjct: 474 TELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQL 653
Query: 558 YKA 566
++A
Sbjct: 654 HEA 662
Score = 49.6 bits (102), Expect(2) = 6e-032
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2 / +3
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M+++ +P P+P +D+ L KAF+G+G + I IL HR + QR I+Q Y
Sbjct: 129 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTY 287
>gb|DR058791.1|DR058791 RTNIT1_13_H07.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_13_H07_A029 5', mRNA sequence
Length = 658
Score = 138 bits (297), Expect = 7e-032
Identities = 62/149 (41%), Positives = 90/149 (60%)
Frame = +3 / -2
Query: 519 VDPTIVTHDAKDLYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIK 698
VD T DAK LY+A E R GTDE FIR+F+ER+ + L ++ + Y Y + K +K
Sbjct: 657 VDITKARCDAKMLYEASEGRCGTDEDTFIRIFSERAVSQLHAIFACYKQEYGHDIMKGLK 478
Query: 699 SETSGNFEFALLTILRCAENPAKYFAKLLRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKA 878
ET FE A+ ++ PA YFAK+L + MKGL D+ + RV+VTR E+D++ I
Sbjct: 477 RETQKEFEEAIRVTIKSMYLPANYFAKVLHRGMKGLLNDESAITRVMVTRAEVDLKEINV 298
Query: 879 EYLKKYKKPLAEAINSETSGNYRTFLLSL 965
Y +KYK + +A + E SG ++ F L+L
Sbjct: 297 VYERKYKMSIVQAFHQEFSGYFKNFCLAL 211
>gb|DT634092.1|DT634092 EST1149023 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG217 3' end, mRNA sequence
Length = 752
Score = 109 bits (233), Expect(2) = 9e-032
Identities = 48/134 (35%), Positives = 83/134 (61%)
Frame = +3 / +2
Query: 198 MYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTP 377
+Y E+ R+ SEL+ + ++A+ LW LDP RDA + E++ + + R+ EI +R+
Sbjct: 242 LYEEDFLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSS 421
Query: 378 SQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
++L ++Q Y+ R+ LE D+A HT GD +KLL+ + RYEGPEVD + +AK L
Sbjct: 422 TELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQL 601
Query: 558 YKAGEKRLGTDEKI 599
++A + + +E++
Sbjct: 602 HEAIKDKAFGNEEL 643
Score = 48.7 bits (100), Expect(2) = 9e-032
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +2 / +2
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M+++ P P+P +D+ L KAF+G+G + I IL HR + QR I+Q Y
Sbjct: 77 MSTIIAPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTY 235
>gb|DR687288.1|DR687288 EST1077369 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABQ20 3' end, mRNA sequence
Length = 716
Score = 109 bits (233), Expect(2) = 9e-032
Identities = 48/134 (35%), Positives = 83/134 (61%)
Frame = +3 / +3
Query: 198 MYHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTP 377
+Y E+ R+ SEL+ + ++A+ LW LDP RDA + E++ + + R+ EI +R+
Sbjct: 234 LYEEDFLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSS 413
Query: 378 SQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
++L ++Q Y+ R+ LE D+A HT GD +KLL+ + RYEGPEVD + +AK L
Sbjct: 414 TELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQL 593
Query: 558 YKAGEKRLGTDEKI 599
++A + + +E++
Sbjct: 594 HEAIKDKAFGNEEL 635
Score = 48.7 bits (100), Expect(2) = 9e-032
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +2 / +3
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M+++ P P+P +D+ L KAF+G+G + I IL HR + QR I+Q Y
Sbjct: 69 MSTIIAPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTY 227
>gb|BQ198594.1|BQ198594 NXLV133_D07_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV133_D07 5' similar to Arabidopsis thaliana
sequence At1g68090 calcium-binding protein annexin 5
(ANN5) see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 717
Score = 138 bits (295), Expect = 1e-031
Identities = 60/145 (41%), Positives = 89/145 (61%)
Frame = +3 / +2
Query: 531 IVTHDAKDLYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETS 710
I+ DAK LY+A E R GTDE FIR+F+ER+ + L ++ + Y Y + K +K ET
Sbjct: 5 IMAGDAKMLYEASEGRCGTDEDTFIRIFSERAVSQLHAIFACYKQEYGHDIMKGLKRETQ 184
Query: 711 GNFEFALLTILRCAENPAKYFAKLLRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLK 890
FE A+ ++ PA YFAK+L + MKGL D+ + RV+VTR E+D++ I Y +
Sbjct: 185 KEFEEAIRVTIKSMYLPANYFAKVLHRGMKGLLNDESAITRVMVTRAEVDLKEINVVYER 364
Query: 891 KYKKPLAEAINSETSGNYRTFLLSL 965
KYK + +A + E SG ++ F L+L
Sbjct: 365 KYKMSIVQAFHQEFSGYFKNFCLAL 439
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 834,407,930
Number of Sequences: 355925
Number of extensions: 13055301
Number of successful extensions: 63452
Number of sequences better than 1.0e-020: 102
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 23197726620
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)