TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3696569.2.1
(1022 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds 407 e-114
gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds 408 e-113
gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds 408 e-113
gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds 405 e-112
gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds 400 e-110
gb|CX650703.1|CX650703 COLD1_47_B12.g1_A029 Root cold Pinus... 398 e-110
gb|DR692635.1|DR692635 EST1082723 Normalized pine embryo li... 388 e-107
gb|DR688987.1|DR688987 EST1079073 Normalized pine embryo li... 387 e-107
gb|CF391855.1|CF391855 RTDR3_10_C05.g1_A022 Loblolly pine r... 387 e-107
gb|CN784348.1|CN784348 EST783039 Sequencing ESTs from loblo... 387 e-107
gb|DT625757.1|DT625757 EST1157681 Sequencing ESTs from lobl... 387 e-107
gb|DR097316.1|DR097316 STRR1_33_H05.g3_A033 Stem Response R... 385 e-106
gb|DR095411.1|DR095411 STRR1_20_G09.g1_A033 Stem Response R... 312 e-106
gb|DR021085.1|DR021085 STRS1_42_F09.b1_A034 Shoot tip pitch... 312 e-106
gb|CF668294.1|CF668294 RTCNT1_35_D04.g1_A029 Root control P... 312 e-106
gb|CO197872.1|CO197872 GEO1_9_E12.g1_A029 Root gravitropism... 385 e-106
gb|CX649938.1|CX649938 COLD1_42_B01.g1_A029 Root cold Pinus... 385 e-106
gb|DR181356.1|DR181356 RTMNUT1_38_A01.g2_A029 Roots minus m... 384 e-106
gb|CF471926.1|CF471926 RTDS1_7_A08.g1_A015 Drought-stressed... 311 e-106
gb|CO169500.1|CO169500 NDL1_7_B04.g1_A029 Needles control P... 309 e-105
gb|DR010861.1|DR010861 HEAT1_1_F12.g1_A029 Root at 37 C for... 381 e-105
gb|DR070312.1|DR070312 RTDK1_12_C03.g1_A029 Roots, dark Pin... 381 e-105
gb|DT624714.1|DT624714 EST1159049 Sequencing ESTs from lobl... 305 e-105
gb|CV144435.1|CV144435 EST855644 Sequencing ESTs from loblo... 305 e-105
gb|DR685073.1|DR685073 EST1075150 Normalized pine embryo li... 306 e-104
gb|DT624311.1|DT624311 EST1158586 Sequencing ESTs from lobl... 303 e-103
gb|CX648930.1|CX648930 COLD1_31_H02.g1_A029 Root cold Pinus... 301 e-103
gb|DR050310.1|DR050310 RTBOR1_22_D04.g1_A029 Roots plus add... 301 e-103
gb|CO367487.1|CO367487 RTK1_34_D03.g1_A029 Roots minus pota... 301 e-103
gb|DR120696.1|DR120696 RTMG1_31_G12.b1_A029 Roots minus mag... 300 e-103
gb|CO367410.1|CO367410 RTK1_34_D03.b1_A029 Roots minus pota... 301 e-102
gb|DR093671.1|DR093671 STRR1_9_E07.g1_A033 Stem Response Re... 297 e-102
gb|DT632413.1|DT632413 EST1147344 Normalized pine embryo li... 371 e-102
gb|CO368748.1|CO368748 RTK1_42_C07.g1_A029 Roots minus pota... 299 e-101
gb|DR051834.1|DR051834 RTBOR1_32_E10.g1_A029 Roots plus add... 292 e-101
gb|DR096360.1|DR096360 STRR1_27_B05.g1_A033 Stem Response R... 312 e-100
gb|DR180723.1|DR180723 RTMNUT1_34_A06.g1_A029 Roots minus m... 243 1e-099
gb|DT632636.1|DT632636 EST1147567 Normalized pine embryo li... 254 1e-099
gb|DR120161.1|DR120161 RTMG1_27_H07.g2_A029 Roots minus mag... 353 9e-097
gb|CO369598.1|CO369598 RTK1_48_F01.b1_A029 Roots minus pota... 290 6e-096
gb|CF476071.1|CF476071 RTWW2_16_D03.g1_A021 Well-watered lo... 351 6e-096
gb|CX649475.1|CX649475 COLD1_35_B04.g1_A029 Root cold Pinus... 265 2e-095
gb|DR015281.1|DR015281 STRS1_2_C05.g1_A034 Shoot tip pitch ... 265 2e-095
gb|DR099166.1|DR099166 STRR1_53_C12.g1_A033 Stem Response R... 265 2e-095
gb|DR070152.1|DR070152 RTDK1_11_D01.g1_A029 Roots, dark Pin... 265 2e-095
gb|DR055148.1|DR055148 RTCA1_21_G09.g2_A029 Roots minus cal... 265 2e-095
gb|CF477384.1|CF477384 RTWW3_7_A01.g1_A022 Well-watered lob... 275 2e-095
gb|DR683982.1|DR683982 EST1074058 Normalized pine embryo li... 341 4e-095
gb|DT631935.1|DT631935 EST1146866 Normalized pine embryo li... 341 4e-095
gb|DT636492.1|DT636492 EST1151423 Normalized pine embryo li... 264 5e-095
gb|DR096273.1|DR096273 STRR1_26_H05.g1_A033 Stem Response R... 263 7e-095
gb|DR093057.1|DR093057 STRR1_5_F06.g1_A033 Stem Response Re... 262 1e-094
gb|DR051531.1|DR051531 RTBOR1_30_E09.g1_A029 Roots plus add... 262 1e-094
gb|CX652556.1|CX652556 COLD1_59_H02.g1_A029 Root cold Pinus... 265 4e-094
gb|DR168497.1|DR168497 RTPHOS1_25_G11.g1_A029 Roots minus p... 269 9e-094
gb|DR019211.1|DR019211 STRS1_28_B06.g1_A034 Shoot tip pitch... 239 2e-093
gb|DR011619.1|DR011619 HEAT1_6_G09.g1_A029 Root at 37 C for... 255 2e-092
gb|CF666895.1|CF666895 RTCNT1_26_G11.g1_A029 Root control P... 248 2e-092
gb|DR024833.1|DR024833 STRS1_67_F03.g1_A034 Shoot tip pitch... 255 2e-092
gb|CF668487.1|CF668487 RTCNT1_36_F12.g1_A029 Root control P... 255 2e-092
gb|CF386013.1|CF386013 RTDR1_7_F11.g1_A015 Loblolly pine ro... 252 1e-091
gb|CF402042.1|CF402042 RTWW1_16_F09.g1_A015 Well-watered lo... 247 2e-091
gb|DR692432.1|DR692432 EST1082520 Normalized pine embryo li... 263 5e-091
gb|DR745029.1|DR745029 RTCU1_26_C03.g1_A029 Roots plus adde... 303 7e-091
gb|CF479898.1|CF479898 RTWW3_12_H04.g1_A022 Well-watered lo... 331 5e-090
gb|DR080162.1|DR080162 RTFEPL1_20_E11.g1_A029 Roots plus ad... 247 7e-090
gb|CF663902.1|CF663902 RTCNT1_5_H12.g1_A029 Root control Pi... 326 1e-088
gb|CF386766.1|CF386766 RTDR1_16_C08.g1_A015 Loblolly pine r... 240 7e-088
gb|CF400637.1|CF400637 RTWW1_6_B06.g1_A015 Well-watered lob... 240 7e-088
gb|CF391890.1|CF391890 RTDR3_10_G01.g1_A022 Loblolly pine r... 240 7e-088
gb|DR092307.1|DR092307 RTAL1_28_G05.b1_A029 Roots plus adde... 240 7e-088
gb|CO171305.1|CO171305 NDL1_20_C09.g1_A029 Needles control ... 248 1e-087
gb|DR090373.1|DR090373 RTAL1_14_D02.g1_A029 Roots plus adde... 256 2e-087
gb|DR120128.1|DR120128 RTMG1_27_E05.g2_A029 Roots minus mag... 236 9e-087
gb|BF609490.1|BF609490 NXSI_043_C03_F NXSI (Nsf Xylem Side ... 319 2e-086
gb|AW011524.1|AW011524 ST21H02 Pine TriplEx shoot tip libra... 238 3e-086
gb|CO362158.1|CO362158 RTK1_1_E05.g1_A029 Roots minus potas... 265 3e-085
gb|CO362167.1|CO362167 RTK1_1_F05.g1_A029 Roots minus potas... 258 1e-084
gb|DR165660.1|DR165660 RTPHOS1_6_B10.g1_A029 Roots minus ph... 301 4e-084
gb|DR746394.1|DR746394 RTCU1_36_E04.g1_A029 Roots plus adde... 226 5e-083
gb|DR098553.1|DR098553 STRR1_46_F12.b1_A033 Stem Response R... 265 2e-082
gb|DR055601.1|DR055601 RTCA1_24_E10.g2_A029 Roots minus cal... 232 4e-082
gb|CF400025.1|CF400025 RTWW1_2_C11.g1_A015 Well-watered lob... 213 3e-081
gb|BX254474.1|BX254474 BX254474 Pinus pinaster differenciat... 265 4e-081
gb|CR393417.1|CR393417 CR393417 RN Pinus pinaster cDNA clon... 253 5e-080
gb|BM427751.1|BM427751 NXRV_002_G05_F NXRV (Nsf Xylem Root ... 297 1e-079
gb|DR056635.1|DR056635 RTCA1_31_C07.g1_A029 Roots minus cal... 219 6e-078
gb|CO200976.1|CO200976 RTCNT2_2_G03.g1_A029 Root control 2 ... 265 8e-078
gb|DR072178.1|DR072178 RTDK1_24_C09.g1_A029 Roots, dark Pin... 265 1e-077
gb|CX648594.1|CX648594 COLD1_29_D11.g1_A029 Root cold Pinus... 217 3e-076
gb|DR742067.1|DR742067 RTCU1_1_B09.g1_A029 Roots plus added... 217 3e-076
gb|DR089298.1|DR089298 RTAL1_7_G03.g1_A029 Roots plus added... 198 3e-075
gb|DR168662.1|DR168662 RTPHOS1_27_B09.b1_A029 Roots minus p... 248 8e-075
gb|CF479851.1|CF479851 RTWW3_12_D07.g1_A022 Well-watered lo... 196 1e-074
gb|DR022663.1|DR022663 STRS1_52_D06.g1_A034 Shoot tip pitch... 190 7e-073
gb|BQ198383.1|BQ198383 NXLV130_C02_F NXLV (Nsf Xylem Late w... 274 9e-073
gb|BX250040.1|BX250040 BX250040 Pinus pinaster differenciat... 273 2e-072
gb|DR163422.1|DR163422 RTFE1_42_G07.g1_A029 Roots minus iro... 265 6e-072
gb|BX253271.1|BX253271 BX253271 Pinus pinaster differenciat... 186 9e-072
gb|BX251144.1|BX251144 BX251144 Pinus pinaster differenciat... 185 2e-071
gb|CV035603.1|CV035603 RTNACL1_41_D10.b1_A029 Roots plus ad... 178 3e-071
gb|DR096352.1|DR096352 STRR1_27_A07.g1_A033 Stem Response R... 184 4e-071
gb|DR119331.1|DR119331 RTMG1_22_C11.g1_A029 Roots minus mag... 261 6e-071
gb|BX682844.1|BX682844 BX682844 Pinus pinaster differenciat... 183 8e-071
gb|BX251613.1|BX251613 BX251613 Pinus pinaster differenciat... 183 8e-071
gb|DR053875.1|DR053875 RTCA1_13_G12.g1_A029 Roots minus cal... 193 8e-071
gb|CF477424.1|CF477424 RTWW3_7_B01.g1_A022 Well-watered lob... 191 2e-070
gb|CX713463.1|CX713463 RTPQ1_9_C04.g1_A032 Roots treated wi... 265 3e-070
gb|DR113034.1|DR113034 RTS1_32_B12.g1_A029 Roots minus sulf... 265 3e-070
gb|DR023285.1|DR023285 STRS1_56_D02.g1_A034 Shoot tip pitch... 265 4e-070
gb|CV138360.1|CV138360 EST849569 Sequencing ESTs from loblo... 192 4e-070
gb|DR100599.1|DR100599 STRR1_65_E02.g1_A033 Stem Response R... 239 4e-070
gb|DR100480.1|DR100480 STRR1_64_A12.g1_A033 Stem Response R... 180 7e-070
gb|CF400653.1|CF400653 RTWW1_6_A01.g1_A015 Well-watered lob... 215 1e-069
gb|CO166169.1|CO166169 FLD1_59_G05.g1_A029 Root flooded Pin... 174 1e-069
gb|DT633920.1|DT633920 EST1148851 Normalized pine embryo li... 161 5e-069
gb|BF518096.1|BF518096 NXSI_030_H10_F NXSI (Nsf Xylem Side ... 260 1e-068
gb|CX646780.1|CX646780 COLD1_11_B06.g1_A029 Root cold Pinus... 259 2e-068
gb|DR119250.1|DR119250 RTMG1_22_C11.b1_A029 Roots minus mag... 249 2e-068
gb|CO361435.1|CO361435 NDL2_4_G08.g1_A029 Needles control 2... 190 4e-068
gb|BG275593.1|BG275593 NXSI_143_F09_F NXSI (Nsf Xylem Side ... 255 4e-067
gb|DT639052.1|DT639052 EST1153983 Normalized pine embryo li... 186 7e-067
gb|BF778581.1|BF778581 NXSI_088_D02_F NXSI (Nsf Xylem Side ... 197 4e-066
gb|DT635613.1|DT635613 EST1150544 Normalized pine embryo li... 88 9e-066
gb|CF668454.1|CF668454 RTCNT1_36_C09.g1_A029 Root control P... 242 4e-065
gb|DR011201.1|DR011201 HEAT1_4_E06.b1_A029 Root at 37 C for... 242 4e-065
gb|CX650764.1|CX650764 COLD1_48_A05.b1_A029 Root cold Pinus... 245 4e-064
gb|DR056610.1|DR056610 RTCA1_31_A02.g1_A029 Roots minus cal... 155 7e-064
gb|DR111040.1|DR111040 RTS1_14_G09.g1_A029 Roots minus sulf... 242 8e-064
gb|DR163235.1|DR163235 RTFE1_41_E12.g1_A029 Roots minus iro... 217 1e-063
gb|CO172418.1|CO172418 NDL1_29_D02.g1_A029 Needles control ... 217 7e-063
gb|DR689717.1|DR689717 EST1079803 Normalized pine embryo li... 88 1e-062
gb|DR163745.1|DR163745 RTFE1_44_D12.g1_A029 Roots minus iro... 217 3e-062
gb|BE762031.1|BE762031 NXCI_076_B10_F NXCI (Nsf Xylem Compr... 178 5e-062
gb|DR055444.1|DR055444 RTCA1_23_E11.g2_A029 Roots minus cal... 161 8e-061
gb|DT637181.1|DT637181 EST1152112 Normalized pine embryo li... 183 9e-061
gb|DR687528.1|DR687528 EST1077610 Normalized pine embryo li... 161 2e-060
gb|AW290718.1|AW290718 NXNV046B02F Nsf Xylem Normal wood Ve... 228 4e-059
gb|CD027376.1|CD027376 NXNV046B02 Nsf Xylem Normal wood Ver... 228 4e-059
gb|CF475910.1|CF475910 RTWW2_15_D07.g1_A021 Well-watered lo... 217 9e-059
gb|BG039378.1|BG039378 NXSI_098_D11_F NXSI (Nsf Xylem Side ... 198 3e-058
gb|CV035793.1|CV035793 RTNACL1_42_B01.g1_A029 Roots plus ad... 213 2e-056
gb|DR071242.1|DR071242 RTDK1_18_C12.g1_A029 Roots, dark Pin... 218 6e-056
gb|BM367687.1|BM367687 NXLV_053_B09_F NXLV (Nsf Xylem Late ... 134 9e-056
gb|CO361349.1|CO361349 NDL2_4_G08.b1_A029 Needles control 2... 217 1e-055
gb|DR163147.1|DR163147 RTFE1_41_E12.b1_A029 Roots minus iro... 217 1e-055
gb|DR163481.1|DR163481 RTFE1_43_D12.b1_A029 Roots minus iro... 217 1e-055
gb|BX251561.1|BX251561 BX251561 Pinus pinaster differenciat... 132 2e-055
gb|CF471900.1|CF471900 RTDS1_7_A08.b1_A015 Drought-stressed... 216 2e-055
gb|BE049743.1|BE049743 NXNV_143_C08_F Nsf Xylem Normal wood... 215 6e-055
gb|DR163657.1|DR163657 RTFE1_44_D12.b1_A029 Roots minus iro... 215 6e-055
gb|CF668214.1|CF668214 RTCNT1_35_D04.b1_A029 Root control P... 213 2e-054
gb|AW290008.1|AW290008 NXNV009E08F Nsf Xylem Normal wood Ve... 137 8e-054
gb|CD026675.1|CD026675 NXNV009E08 Nsf Xylem Normal wood Ver... 137 8e-054
gb|DR090533.1|DR090533 RTAL1_15_E12.g1_A029 Roots plus adde... 120 2e-053
gb|CX650634.1|CX650634 COLD1_47_B12.b1_A029 Root cold Pinus... 201 2e-052
gb|DR694543.1|DR694543 EST1084635 Normalized pine embryo li... 135 1e-051
gb|DR100574.1|DR100574 STRR1_65_E02.b1_A033 Stem Response R... 201 8e-051
gb|DR050231.1|DR050231 RTBOR1_22_D04.b1_A029 Roots plus add... 199 4e-050
gb|DR010784.1|DR010784 HEAT1_1_F12.b1_A029 Root at 37 C for... 190 1e-049
gb|BF517063.1|BF517063 NXSI_008_G03_F NXSI (Nsf Xylem Side ... 196 3e-049
gb|CV035673.1|CV035673 RTNACL1_41_D10.g1_A029 Roots plus ad... 178 2e-048
gb|DR692513.1|DR692513 EST1082601 Normalized pine embryo li... 157 8e-048
gb|DR070179.1|DR070179 RTDK1_11_F07.g1_A029 Roots, dark Pin... 105 1e-047
gb|BM902805.1|BM902805 NXLV_075_E10_F NXLV (Nsf Xylem Late ... 189 3e-047
gb|CO169428.1|CO169428 NDL1_7_B04.b1_A029 Needles control P... 188 6e-047
gb|AA556861.1|AA556861 703 Loblolly pine C Pinus taeda cDNA... 132 1e-046
gb|CR393207.1|CR393207 CR393207 RN Pinus pinaster cDNA clon... 105 3e-046
gb|BF609081.1|BF609081 NXSI_040_B10_F NXSI (Nsf Xylem Side ... 185 4e-046
gb|DR100138.1|DR100138 STRR1_62_B05.b1_A033 Stem Response R... 185 4e-046
gb|BF609532.1|BF609532 NXSI_043_G01_F NXSI (Nsf Xylem Side ... 106 5e-046
gb|CF399941.1|CF399941 RTWW1_2_C11.b1_A015 Well-watered lob... 180 7e-046
gb|AW290022.1|AW290022 NXNV009F01F Nsf Xylem Normal wood Ve... 105 2e-045
gb|CD026679.1|CD026679 NXNV009F01 Nsf Xylem Normal wood Ver... 105 2e-045
gb|DR015200.1|DR015200 STRS1_2_C05.b1_A034 Shoot tip pitch ... 182 3e-045
gb|DR102735.1|DR102735 STRR1_83_A06.g1_A033 Stem Response R... 182 3e-045
gb|DR071475.1|DR071475 RTDK1_20_C09.b1_A029 Roots, dark Pin... 182 5e-045
gb|BQ654413.1|BQ654413 NXRV080_A02_F NXRV (Nsf Xylem Root w... 181 9e-045
gb|CO368672.1|CO368672 RTK1_42_C07.b1_A029 Roots minus pota... 179 3e-044
gb|CF474408.1|CF474408 RTWW2_20_A09.g1_A021 Well-watered lo... 178 4e-044
gb|DR055518.1|DR055518 RTCA1_24_E10.b1_A029 Roots minus cal... 178 6e-044
gb|CF386668.1|CF386668 RTDR1_16_C08.b1_A015 Loblolly pine r... 177 8e-044
gb|DR092975.1|DR092975 STRR1_5_F06.b1_A033 Stem Response Re... 175 4e-043
gb|DR071171.1|DR071171 RTDK1_18_C12.b1_A029 Roots, dark Pin... 167 9e-043
gb|AW985386.1|AW985386 NXNV_134_G08_F Nsf Xylem Normal wood... 172 4e-042
gb|CX649869.1|CX649869 COLD1_42_B01.b1_A029 Root cold Pinus... 171 1e-041
gb|BF186094.1|BF186094 NXCI_132_F04_F NXCI (Nsf Xylem Compr... 170 2e-041
gb|DR047687.1|DR047687 RTBOR1_2_F07.g1_A029 Roots plus adde... 162 2e-041
gb|AW290421.1|AW290421 NXNV020D02F Nsf Xylem Normal wood Ve... 148 2e-041
gb|CD027081.1|CD027081 NXNV020D02 Nsf Xylem Normal wood Ver... 148 2e-041
gb|DR098461.1|DR098461 STRR1_45_E01.g1_A033 Stem Response R... 168 5e-041
gb|DR102236.1|DR102236 STRR1_79_C04.g1_A033 Stem Response R... 105 6e-041
gb|CX651774.1|CX651774 COLD1_54_E06.g1_A029 Root cold Pinus... 166 3e-040
gb|CF396870.1|CF396870 RTDS2_24_A10.g1_A021 Drought-stresse... 160 1e-038
gb|BE582419.1|BE582419 NXCI_033_B08_F NXCI (Nsf Xylem Compr... 160 2e-038
gb|AA556812.1|AA556812 654 Loblolly pine C Pinus taeda cDNA... 96 3e-037
gb|DR090297.1|DR090297 RTAL1_14_D02.b1_A029 Roots plus adde... 153 2e-036
gb|DR112973.1|DR112973 RTS1_32_B12.b1_A029 Roots minus sulf... 153 2e-036
gb|CO168791.1|CO168791 NDL1_2_C05.g1_A029 Needles control P... 141 3e-036
gb|CO369680.1|CO369680 RTK1_48_F01.g1_A029 Roots minus pota... 151 6e-036
gb|AA556399.1|AA556399 254 Loblolly pine C Pinus taeda cDNA... 101 6e-036
gb|DR090465.1|DR090465 RTAL1_15_E12.b1_A029 Roots plus adde... 151 8e-036
gb|DR024751.1|DR024751 STRS1_67_F03.b1_A034 Shoot tip pitch... 150 1e-035
gb|CO368747.1|CO368747 RTK1_42_C06.g1_A029 Roots minus pota... 96 3e-035
gb|BG039056.1|BG039056 NXSI_092_B09_F NXSI (Nsf Xylem Side ... 95 4e-035
gb|DR015024.1|DR015024 STRS1_1_B12.b1_A034 Shoot tip pitch ... 148 6e-035
gb|BF610570.1|BF610570 NXSI_060_B07_F NXSI (Nsf Xylem Side ... 146 3e-034
gb|CO171240.1|CO171240 NDL1_20_C09.b1_A029 Needles control ... 138 7e-034
gb|CF400511.1|CF400511 RTWW1_6_B06.b1_A015 Well-watered lob... 143 3e-033
gb|DR070227.1|DR070227 RTDK1_12_C03.b1_A029 Roots, dark Pin... 143 3e-033
gb|DR684423.1|DR684423 EST1074500 Normalized pine embryo li... 139 3e-032
gb|BM158415.1|BM158415 NXLV_034_B09_F NXLV (Nsf Xylem Late ... 138 4e-032
gb|CX649395.1|CX649395 COLD1_35_B04.b1_A029 Root cold Pinus... 138 8e-032
gb|BQ107011.1|BQ107011 NXLV085_E06_F NXLV (Nsf Xylem Late w... 135 6e-031
gb|DR021638.1|DR021638 STRS1_46_B05.b1_A034 Shoot tip pitch... 133 1e-030
gb|CF475767.1|CF475767 RTWW2_15_D07.b1_A021 Well-watered lo... 130 1e-029
gb|DR054266.1|DR054266 RTCA1_16_F08.b1_A029 Roots minus cal... 130 1e-029
gb|DR049222.1|DR049222 RTBOR1_14_A04.g1_A029 Roots plus add... 95 1e-029
gb|AW698185.1|AW698185 NXNV_074_D07_F Nsf Xylem Normal wood... 127 9e-029
gb|BF778542.1|BF778542 NXSI_085_H09_F NXSI (Nsf Xylem Side ... 127 9e-029
gb|DR092690.1|DR092690 STRR1_3_D06.b1_A033 Stem Response Re... 127 9e-029
gb|CD020758.1|CD020758 NXNV_085_G07_F Nsf Xylem Normal wood... 127 2e-028
gb|DR051762.1|DR051762 RTBOR1_32_E10.b1_A029 Roots plus add... 127 2e-028
gb|DR089220.1|DR089220 RTAL1_7_G03.b1_A029 Roots plus added... 126 3e-028
gb|BF049828.1|BF049828 NXCI_111_D09_F NXCI (Nsf Xylem Compr... 102 4e-028
gb|DR162969.1|DR162969 RTFE1_23_E05.b1_A029 Roots minus iro... 95 2e-027
gb|CO201071.1|CO201071 RTCNT2_3_A06.g1_A029 Root control 2 ... 122 4e-027
gb|AW290292.1|AW290292 NXNV018A05F Nsf Xylem Normal wood Ve... 120 1e-026
gb|CD026951.1|CD026951 NXNV018A05 Nsf Xylem Normal wood Ver... 120 1e-026
gb|CF668373.1|CF668373 RTCNT1_36_C09.b1_A029 Root control P... 118 5e-026
gb|DR691294.1|DR691294 EST1081381 Normalized pine embryo li... 118 7e-026
gb|AW587662.1|AW587662 ST63B06 Pine TriplEx shoot tip libra... 101 3e-024
gb|DR055360.1|DR055360 RTCA1_23_E11.b1_A029 Roots minus cal... 111 1e-023
gb|DR021165.1|DR021165 STRS1_42_F09.g1_A034 Shoot tip pitch... 107 1e-022
gb|BF517775.1|BF517775 NXSI_031_A12_F NXSI (Nsf Xylem Side ... 87 5e-022
gb|DR092742.1|DR092742 STRR1_3_D06.g1_A033 Stem Response Re... 105 5e-022
gb|AW697618.1|AW697618 ST61B04 Pine TriplEx shoot tip libra... 105 7e-022
gb|CO363885.1|CO363885 RTK1_12_H12.b1_A029 Roots minus pota... 72 9e-022
gb|CF385917.1|CF385917 RTDR1_7_F11.b1_A015 Loblolly pine ro... 103 3e-021
gb|DR079899.1|DR079899 RTFEPL1_18_B10.g1_A029 Roots plus ad... 103 3e-021
gb|BE761955.1|BE761955 NXCI_075_C03_F NXCI (Nsf Xylem Compr... 102 4e-021
gb|DR070096.1|DR070096 RTDK1_11_F07.b1_A029 Roots, dark Pin... 101 7e-021
gb|CF385705.1|CF385705 RTDR1_5_F10.g1_A015 Loblolly pine ro... 85 9e-021
>gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds
Length = 891
Score = 407 bits (882), Expect(2) = e-114
Identities = 150/194 (77%), Positives = 175/194 (90%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGT+TAALSTALFNDG +CG+CYE++C++D +WCLPGT+TVTATN
Sbjct: 77 TMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMQCNDDPQWCLPGTVTVTATN 256
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP+D+GGWCNPP HFDMAEPAFL+IA+YR GIVP+ + RVPC++KGGIRFT+
Sbjct: 257 FCPPNNALPNDNGGWCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTV 436
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHSYFNLVL+TNV GAGDV +VSI+GSR+GWQPMSRNWGQNWQSNSYL+ Q+LSFQVT
Sbjct: 437 NGHSYFNLVLITNVGGAGDVNAVSIKGSRSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTT 616
Query: 606 SDGRTVTSNGAVPA 647
SDGRTV SN P+
Sbjct: 617 SDGRTVVSNNVAPS 658
Score = 248 bits (535), Expect = 7e-065
Identities = 113/190 (59%), Positives = 122/190 (64%)
Frame = -2 / -1
Query: 694 HPQNWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHP 515
+P W PS VWPNCQ G TVRPSL VTWNE C R ELLCQF PQ RDMGC P
Sbjct: 705 YP*TWLPSNVWPNCQFEGATLFETTVRPSLVVTWNERLCPLR*ELLCQFCPQLRDMGCQP 526
Query: 514 VREPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRR 335
+ +P MET TSPAP TLV STRLK E P V R+PPF GTL+ GT+P Y A+ R
Sbjct: 525 LLDPFMETALTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFR 346
Query: 334 KAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAP 155
KAGSA+SKC GGLH PP SLGR GGQKLVAVTV VPG *Q P +P
Sbjct: 345 KAGSAISKCCSGGLHHPPLSLGRALFGGQKLVAVTVTVPGKHHWGSSLHCIS*QAPQLSP 166
Query: 154 SLNSAVLSAA 125
SL AVL AA
Sbjct: 165 SLKRAVLKAA 136
Score = 26.3 bits (51), Expect(2) = e-114
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2 / +1
Query: 650 LAVRPDLRGRPVLRMN 697
LA+RPD+R +P LR++
Sbjct: 661 LAIRPDIRRKPGLRIS 708
>gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds
Length = 919
Score = 408 bits (886), Expect = e-113
Identities = 151/194 (77%), Positives = 175/194 (90%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGT+TAALSTALFNDG +CG+CYE+RC++D +WCLPGT+TVTATN
Sbjct: 77 TMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMRCNDDPQWCLPGTVTVTATN 256
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP+D+GGWCNPP HFDMAEPAFL+IA+YR GIVP+ + RVPC++KGGIRFT+
Sbjct: 257 FCPPNNALPNDNGGWCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTV 436
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHSYFNLVL+TNV GAGDV +VSI+GSR+GWQPMSRNWGQNWQSNSYL+ Q+LSFQVT
Sbjct: 437 NGHSYFNLVLITNVGGAGDVHAVSIKGSRSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTT 616
Query: 606 SDGRTVTSNGAVPA 647
SDGRTV SN P+
Sbjct: 617 SDGRTVVSNNVAPS 658
Score = 255 bits (551), Expect = 4e-067
Identities = 115/190 (60%), Positives = 124/190 (65%)
Frame = -2 / -2
Query: 694 HPQNWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHP 515
+P W PSKVWPNCQ G TVRPSL VTWNE C RYELLCQF PQ RDMGC P
Sbjct: 705 YP*TWLPSKVWPNCQFEGATLFETTVRPSLVVTWNERLCPLRYELLCQFCPQLRDMGCQP 526
Query: 514 VREPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRR 335
+ +P MET TSPAP TLV STRLK E P V R+PPF GTL+ GT+P Y A+ R
Sbjct: 525 LLDPFMETAWTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFR 346
Query: 334 KAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAP 155
KAGSA+SKC GGLH PP SLGR GGQKLVAVTV VPG *Q P +P
Sbjct: 345 KAGSAISKCCSGGLHHPPLSLGRALFGGQKLVAVTVTVPGKHHWGSSLHRIS*QAPQLSP 166
Query: 154 SLNSAVLSAA 125
SL AVL AA
Sbjct: 165 SLKRAVLKAA 136
>gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds
Length = 998
Score = 408 bits (886), Expect = e-113
Identities = 151/194 (77%), Positives = 175/194 (90%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGT+TAALSTALFNDG +CG+CYE+RC++D +WCLPGT+TVTATN
Sbjct: 228 TMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMRCNDDPQWCLPGTVTVTATN 407
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP+D+GGWCNPP HFDMAEPAFL+IA+YR GIVP+ + RVPC++KGGIRFT+
Sbjct: 408 FCPPNNALPNDNGGWCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTV 587
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHSYFNLVL+TNV GAGDV +VSI+GSR+GWQPMSRNWGQNWQSNSYL+ Q+LSFQVT
Sbjct: 588 NGHSYFNLVLITNVGGAGDVHAVSIKGSRSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTT 767
Query: 606 SDGRTVTSNGAVPA 647
SDGRTV SN P+
Sbjct: 768 SDGRTVVSNNVAPS 809
Score = 255 bits (551), Expect = 4e-067
Identities = 115/190 (60%), Positives = 124/190 (65%)
Frame = -2 / -2
Query: 694 HPQNWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHP 515
+P W PSKVWPNCQ G TVRPSL VTWNE C RYELLCQF PQ RDMGC P
Sbjct: 856 YP*TWLPSKVWPNCQFEGATLFETTVRPSLVVTWNERLCPLRYELLCQFCPQLRDMGCQP 677
Query: 514 VREPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRR 335
+ +P MET TSPAP TLV STRLK E P V R+PPF GTL+ GT+P Y A+ R
Sbjct: 676 LLDPFMETAWTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFR 497
Query: 334 KAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAP 155
KAGSA+SKC GGLH PP SLGR GGQKLVAVTV VPG *Q P +P
Sbjct: 496 KAGSAISKCCSGGLHHPPLSLGRALFGGQKLVAVTVTVPGKHHWGSSLHRIS*QAPQLSP 317
Query: 154 SLNSAVLSAA 125
SL AVL AA
Sbjct: 316 SLKRAVLKAA 287
>gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds
Length = 923
Score = 405 bits (879), Expect = e-112
Identities = 149/194 (76%), Positives = 174/194 (89%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGT+TAALSTALFNDG +CG+CYE+RC++D +WCLPGT+TVTATN
Sbjct: 77 TMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMRCNDDPQWCLPGTVTVTATN 256
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP+D+GGWCNPP HFDMAEPAFL+IA+YR GIVP+ + RVPC++KGGIRFT+
Sbjct: 257 FCPPNNALPNDNGGWCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTV 436
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHSYFNLVL+TNV GAGDV +VSI+GS +GWQPMSRNWGQNWQSNSYL+ Q+LSFQVT
Sbjct: 437 NGHSYFNLVLITNVGGAGDVHAVSIKGSMSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTT 616
Query: 606 SDGRTVTSNGAVPA 647
SDGRT+ SN P+
Sbjct: 617 SDGRTIVSNNVAPS 658
Score = 252 bits (544), Expect = 4e-066
Identities = 114/190 (60%), Positives = 123/190 (64%)
Frame = -2 / -3
Query: 694 HPQNWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHP 515
+P W PSKVWPNCQ G VRPSL VTWNE C RYELLCQF PQ RDMGC P
Sbjct: 705 YP*TWLPSKVWPNCQFEGATLFETIVRPSLVVTWNERLCPLRYELLCQFCPQLRDMGCQP 526
Query: 514 VREPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRR 335
+ +P MET TSPAP TLV STRLK E P V R+PPF GTL+ GT+P Y A+ R
Sbjct: 525 LIDPFMETAWTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFR 346
Query: 334 KAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAP 155
KAGSA+SKC GGLH PP SLGR GGQKLVAVTV VPG *Q P +P
Sbjct: 345 KAGSAISKCCSGGLHHPPLSLGRALFGGQKLVAVTVTVPGKHHWGSSLHRIS*QAPQLSP 166
Query: 154 SLNSAVLSAA 125
SL AVL AA
Sbjct: 165 SLKRAVLKAA 136
>gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds
Length = 923
Score = 400 bits (867), Expect = e-110
Identities = 147/194 (75%), Positives = 173/194 (89%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGT+TAALSTALFNDG +CG+CYE++C++D +WCLPGT+T+TATN
Sbjct: 77 TMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMQCNDDPQWCLPGTVTITATN 256
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP+D+GGWCNPP HFDMAEPAFL+IA+YR GIVP+ + RVPC++KGGIRFT+
Sbjct: 257 FCPPNNALPNDNGGWCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTV 436
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHS FNLVL+TNV GAGDV +VSI+G R+GWQPMSRNWGQNWQSNSYL+ Q+LSFQVT
Sbjct: 437 NGHSCFNLVLITNVGGAGDVHAVSIKGPRSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTT 616
Query: 606 SDGRTVTSNGAVPA 647
SDGRTV SN P+
Sbjct: 617 SDGRTVVSNNVAPS 658
Score = 249 bits (539), Expect = 2e-065
Identities = 114/190 (60%), Positives = 122/190 (64%)
Frame = -2 / -3
Query: 694 HPQNWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHP 515
+P W PSKVWPNCQ G TVRPSL VTWNE C RYELLCQF PQ RDMGC P
Sbjct: 705 YP*TWLPSKVWPNCQFEGATLFETTVRPSLVVTWNERLCPLRYELLCQFCPQLRDMGCQP 526
Query: 514 VREPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRR 335
+ P MET TSPAP TLV STRLK E P V R+PPF GTL+ GT+P Y A+ R
Sbjct: 525 LLGPFMETA*TSPAPPTLVMSTRLKHEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFR 346
Query: 334 KAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAP 155
KAGSA+SKC GGLH PP SLGR GGQKLVAV V VPG *Q P +P
Sbjct: 345 KAGSAISKCCSGGLHHPPLSLGRALFGGQKLVAVIVTVPGKHHWGSSLHCIS*QAPQLSP 166
Query: 154 SLNSAVLSAA 125
SL AVL AA
Sbjct: 165 SLKRAVLKAA 136
>gb|CX650703.1|CX650703 COLD1_47_B12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_47_B12_A029 5', mRNA sequence
Length = 629
Score = 398 bits (863), Expect(2) = e-110
Identities = 147/194 (75%), Positives = 172/194 (88%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNL S GYGT+TAALSTALFNDG +CG+CYE++C++D +WCLPGT+TVTATN
Sbjct: 6 TMGGACGYGNLNSQGYGTNTAALSTALFNDGLSCGACYEMQCNDDAQWCLPGTVTVTATN 185
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP+D+GGWCNPP HFDMAEPAF +IA+Y+ GIVP+ +RRVPCV+KGGIRFT+
Sbjct: 186 FCPPNNALPNDNGGWCNPPLQHFDMAEPAFQQIAKYKGGIVPILYRRVPCVRKGGIRFTV 365
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHSYFNLVL+TNV G GDV +VSI+GSRTGWQPMSRNWGQNWQSNSYL+ Q+LSFQVT
Sbjct: 366 NGHSYFNLVLITNVGGPGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNEQSLSFQVTT 545
Query: 606 SDGRTVTSNGAVPA 647
SDG+T S A P+
Sbjct: 546 SDGKTFVSYNAAPS 587
Score = 243 bits (524), Expect = 2e-063
Identities = 112/186 (60%), Positives = 118/186 (63%)
Frame = -2 / -2
Query: 682 WPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREP 503
W PS VWPNCQ G A V PSL VTWNE C R ELLCQF PQ RDMGC PV +P
Sbjct: 622 WHPSNVWPNCQLEGAALYETNVLPSLVVTWNERLCSLR*ELLCQFCPQLRDMGCQPVLDP 443
Query: 502 RMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGS 323
MET TSP P T V STRLK E P V R+PPF T GTLL GT+P Y A+ KAGS
Sbjct: 442 FMETAWTSPGPPTFVMSTRLKYEWPFTVKRIPPFLTQGTLL*RIGTIPPLYFAIC*KAGS 263
Query: 322 AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNS 143
A+SKC GGLH PP SLGR GGQKLVAVTV VPG *Q P +PSL S
Sbjct: 262 AISKCCSGGLHHPPLSLGRALFGGQKLVAVTVTVPGKHHWASSLHCIS*QAPQLSPSLKS 83
Query: 142 AVLSAA 125
AVL AA
Sbjct: 82 AVLKAA 65
Score = 22.1 bits (42), Expect(2) = e-110
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 650 LAVRPDLRGRPVL 688
LA+RPD+R P L
Sbjct: 590 LAIRPDIRRMPSL 628
>gb|DR692635.1|DR692635 EST1082723 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADO50 3' end, mRNA sequence
Length = 902
Score = 388 bits (841), Expect = e-107
Identities = 143/188 (76%), Positives = 170/188 (90%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGT+TAALSTALFN+G +CG+CYE++C++D +WCLPG+I VTATN
Sbjct: 188 TMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPQWCLPGSIVVTATN 367
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP+D+GGWCNPP HFD++EP F IA++RAGIVPV +RRVPC +KGGIRFTI
Sbjct: 368 FCPPNNALPNDNGGWCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTI 547
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHSYFNLVL+TNV GAGDV +VS++G++TGWQPMSRNWGQNWQSNSYLD Q+LSF+VT
Sbjct: 548 NGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNWGQNWQSNSYLDGQSLSFKVTT 727
Query: 606 SDGRTVTS 629
SDG+TVTS
Sbjct: 728 SDGKTVTS 751
Score = 212 bits (458), Expect(2) = 1e-056
Identities = 103/167 (61%), Positives = 107/167 (64%)
Frame = -2 / -3
Query: 625 VTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTR 446
VTV PSL VT E C SR LLCQFWPQFRD+GC PV P ET TSPAP TLV TR
Sbjct: 747 VTVFPSLVVTLKERLCPSR*LLLCQFWPQFRDIGCQPVLAPLTETASTSPAPPTLVMRTR 568
Query: 445 LK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGR 266
LK E PLMV R+PPF GTLL TGT+PAR AM K GS SKC RGGLHQPP SLG
Sbjct: 567 LKYE*PLMVKRIPPFL*QGTLLY*TGTIPARNLAMC*KTGSERSKCSRGGLHQPPLSLGS 388
Query: 265 P*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
LGGQKLVAVT + PG *Q P P LN AVL AA
Sbjct: 387 ALLGGQKLVAVTTIEPGRHHCGSSLHWIS*QAPQLKPLLNKAVLRAA 247
Score = 28.1 bits (55), Expect(2) = 1e-056
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -3
Query: 676 PSKVWPNCQ 650
P+KVWPNCQ
Sbjct: 798 PAKVWPNCQ 772
>gb|DR688987.1|DR688987 EST1079073 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACC87 3' end, mRNA sequence
Length = 772
Score = 387 bits (840), Expect = e-107
Identities = 144/194 (74%), Positives = 170/194 (87%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGT+TAALSTALFN+G +CG+CYE++C++D WCLPG+I VTATN
Sbjct: 185 TMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPAWCLPGSIVVTATN 364
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP+D+GGWCNPP HFD++EP F IA++RAGIVPV +RRVPC +KGGIRFTI
Sbjct: 365 FCPPNNALPNDNGGWCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTI 544
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHSYFNLVL+TNV GAGDV +VS++G++TGWQPMSRNWGQNWQSNSYLD Q+LSF+VT
Sbjct: 545 NGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNWGQNWQSNSYLDGQSLSFKVTT 724
Query: 606 SDGRTVTSNGAVPA 647
SDG+TVTS A
Sbjct: 725 SDGKTVTSYNVASA 766
Score = 214 bits (462), Expect = 8e-055
Identities = 103/167 (61%), Positives = 107/167 (64%)
Frame = -2 / -2
Query: 625 VTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTR 446
VTV PSL VT E C SR LLCQFWPQFRD+GC PV P ET TSPAP TLV TR
Sbjct: 744 VTVFPSLVVTLKERLCPSR*LLLCQFWPQFRDIGCQPVLAPLTETASTSPAPPTLVMRTR 565
Query: 445 LK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGR 266
LK E PLMV R+PPF GTLL TGT+PAR AM K GS SKC RGGLHQPP SLG
Sbjct: 564 LKYEWPLMVKRIPPFL*QGTLLY*TGTIPARNLAMC*KTGSERSKCSRGGLHQPPLSLGS 385
Query: 265 P*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
LGGQKLVAVT + PG *Q P P LN AVL AA
Sbjct: 384 ALLGGQKLVAVTTIEPGRHHAGSSLHWIS*QAPQLKPLLNKAVLRAA 244
>gb|CF391855.1|CF391855 RTDR3_10_C05.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_C05_A022 5', mRNA
sequence
Length = 765
Score = 387 bits (839), Expect = e-107
Identities = 143/188 (76%), Positives = 169/188 (89%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGT+TAALSTALFN+G +CG+CYE++C++D WCLPG+I VTATN
Sbjct: 152 TMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPAWCLPGSIVVTATN 331
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP+D+GGWCNPP HFD++EP F IA++RAGIVPV +RRVPC +KGGIRFTI
Sbjct: 332 FCPPNNALPNDNGGWCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTI 511
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHSYFNLVL+TNV GAGDV +VS++G++TGWQPMSRNWGQNWQSNSYLD Q+LSF+VT
Sbjct: 512 NGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNWGQNWQSNSYLDGQSLSFKVTT 691
Query: 606 SDGRTVTS 629
SDG+TVTS
Sbjct: 692 SDGKTVTS 715
Score = 213 bits (460), Expect(2) = 8e-057
Identities = 103/167 (61%), Positives = 107/167 (64%)
Frame = -2 / -1
Query: 625 VTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTR 446
VTV PSL VT E C SR LLCQFWPQFRD+GC PV P ET TSPAP TLV TR
Sbjct: 711 VTVFPSLVVTLKERLCPSR*LLLCQFWPQFRDIGCQPVLAPLTETASTSPAPPTLVMRTR 532
Query: 445 LK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGR 266
LK E PLMV R+PPF GTLL TGT+PAR AM K GS SKC RGGLHQPP SLG
Sbjct: 531 LKYE*PLMVKRIPPFL*QGTLLY*TGTIPARNLAMC*KTGSERSKCSRGGLHQPPLSLGS 352
Query: 265 P*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
LGGQKLVAVT + PG *Q P P LN AVL AA
Sbjct: 351 ALLGGQKLVAVTTIEPGRHHAGSSLHWIS*QAPQLKPLLNKAVLRAA 211
Score = 28.1 bits (55), Expect(2) = 8e-057
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 676 PSKVWPNCQ 650
P+KVWPNCQ
Sbjct: 762 PAKVWPNCQ 736
>gb|CN784348.1|CN784348 EST783039 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAK45 5' end, mRNA sequence
Length = 778
Score = 387 bits (839), Expect = e-107
Identities = 143/188 (76%), Positives = 169/188 (89%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGT+TAALSTALFN+G +CG+CYE++C++D WCLPG+I VTATN
Sbjct: 131 TMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPAWCLPGSIVVTATN 310
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP+D+GGWCNPP HFD++EP F IA++RAGIVPV +RRVPC +KGGIRFTI
Sbjct: 311 FCPPNNALPNDNGGWCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTI 490
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHSYFNLVL+TNV GAGDV +VS++G++TGWQPMSRNWGQNWQSNSYLD Q+LSF+VT
Sbjct: 491 NGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNWGQNWQSNSYLDGQSLSFKVTT 670
Query: 606 SDGRTVTS 629
SDG+TVTS
Sbjct: 671 SDGKTVTS 694
Score = 213 bits (460), Expect(2) = 8e-057
Identities = 103/167 (61%), Positives = 107/167 (64%)
Frame = -2 / -2
Query: 625 VTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTR 446
VTV PSL VT E C SR LLCQFWPQFRD+GC PV P ET TSPAP TLV TR
Sbjct: 690 VTVFPSLVVTLKERLCPSR*LLLCQFWPQFRDIGCQPVLAPLTETASTSPAPPTLVMRTR 511
Query: 445 LK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGR 266
LK E PLMV R+PPF GTLL TGT+PAR AM K GS SKC RGGLHQPP SLG
Sbjct: 510 LKYE*PLMVKRIPPFL*QGTLLY*TGTIPARNLAMC*KTGSERSKCSRGGLHQPPLSLGS 331
Query: 265 P*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
LGGQKLVAVT + PG *Q P P LN AVL AA
Sbjct: 330 ALLGGQKLVAVTTIEPGRHHAGSSLHWIS*QAPQLKPLLNKAVLRAA 190
Score = 28.1 bits (55), Expect(2) = 8e-057
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -2
Query: 676 PSKVWPNCQ 650
P+KVWPNCQ
Sbjct: 741 PAKVWPNCQ 715
>gb|DT625757.1|DT625757 EST1157681 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA338 5' end, mRNA sequence
Length = 817
Score = 387 bits (839), Expect = e-107
Identities = 143/188 (76%), Positives = 169/188 (89%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGT+TAALSTALFN+G +CG+CYE++C++D WCLPG+I VTATN
Sbjct: 131 TMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPAWCLPGSIVVTATN 310
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP+D+GGWCNPP HFD++EP F IA++RAGIVPV +RRVPC +KGGIRFTI
Sbjct: 311 FCPPNNALPNDNGGWCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTI 490
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHSYFNLVL+TNV GAGDV +VS++G++TGWQPMSRNWGQNWQSNSYLD Q+LSF+VT
Sbjct: 491 NGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNWGQNWQSNSYLDGQSLSFKVTT 670
Query: 606 SDGRTVTS 629
SDG+TVTS
Sbjct: 671 SDGKTVTS 694
Score = 213 bits (460), Expect(2) = 8e-057
Identities = 103/167 (61%), Positives = 107/167 (64%)
Frame = -2 / -2
Query: 625 VTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTR 446
VTV PSL VT E C SR LLCQFWPQFRD+GC PV P ET TSPAP TLV TR
Sbjct: 690 VTVFPSLVVTLKERLCPSR*LLLCQFWPQFRDIGCQPVLAPLTETASTSPAPPTLVMRTR 511
Query: 445 LK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGR 266
LK E PLMV R+PPF GTLL TGT+PAR AM K GS SKC RGGLHQPP SLG
Sbjct: 510 LKYE*PLMVKRIPPFL*QGTLLY*TGTIPARNLAMC*KTGSERSKCSRGGLHQPPLSLGS 331
Query: 265 P*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
LGGQKLVAVT + PG *Q P P LN AVL AA
Sbjct: 330 ALLGGQKLVAVTTIEPGRHHAGSSLHWIS*QAPQLKPLLNKAVLRAA 190
Score = 28.1 bits (55), Expect(2) = 8e-057
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -2
Query: 676 PSKVWPNCQ 650
P+KVWPNCQ
Sbjct: 741 PAKVWPNCQ 715
>gb|DR097316.1|DR097316 STRR1_33_H05.g3_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_33_H05_A033 5', mRNA sequence
Length = 794
Score = 385 bits (834), Expect(2) = e-106
Identities = 145/196 (73%), Positives = 170/196 (86%)
Frame = +3 / -1
Query: 60 ARTTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTA 239
+RT GGACGYGNLYS GYGT+TAALSTALFNDG +CGSCYE++C+ND +WCL GT+TVTA
Sbjct: 779 SRTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGSCYEMKCNNDPQWCLSGTVTVTA 600
Query: 240 TNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRF 419
TNFCPPN LP+D+GGWCN P HFDMAEPAF +IA + GIVP+ +RRVPC++KGGIRF
Sbjct: 599 TNFCPPNNALPNDNGGWCNLPLQHFDMAEPAFQQIAICKGGIVPILYRRVPCLRKGGIRF 420
Query: 420 TINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQV 599
TINGH+YFNLVL+TNVAGAGDV +VSI+GS +GWQ MSRNWGQNWQSNSYL+ Q+LSFQV
Sbjct: 419 TINGHAYFNLVLITNVAGAGDVHAVSIKGSGSGWQAMSRNWGQNWQSNSYLNGQSLSFQV 240
Query: 600 TASDGRTVTSNGAVPA 647
T SDG+T S P+
Sbjct: 239 TTSDGKTTVSYSVAPS 192
Score = 218 bits (470), Expect(2) = 2e-058
Identities = 96/156 (61%), Positives = 105/156 (67%)
Frame = -2 / +1
Query: 685 NWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVRE 506
NW PS VWPNCQP G V PSL VTW + C R ELLCQF PQ RDM C P+ +
Sbjct: 154 NWLPSNVWPNCQPEGATL*ETVVLPSLVVTWKDRLCPFR*ELLCQFCPQLRDMACQPLPD 333
Query: 505 PRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAG 326
P +ET TSPAPATLV TRLK PLMV R+PPF GTLL GT+P + A+ KAG
Sbjct: 334 PFIETAWTSPAPATLVIRTRLKYAWPLMVKRIPPFLKQGTLL*RIGTIPPLHMAICWKAG 513
Query: 325 SAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVP 218
SA+SKC RG LH PP SLGR GGQKLVAVTV VP
Sbjct: 514 SAISKCWRGRLHHPPLSLGRALFGGQKLVAVTVTVP 621
Score = 29.0 bits (57), Expect(2) = 2e-058
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / +1
Query: 175 QDPHAAPSLNSAVLSAA 125
QDP +PSL SAVL AA
Sbjct: 664 QDPQLSPSLKSAVLKAA 714
Score = 23.1 bits (44), Expect(2) = e-106
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / -3
Query: 650 LAVRPDLRGRPVLR 691
LA+RPD+ +PVL+
Sbjct: 189 LAIRPDI*RKPVLK 148
>gb|DR095411.1|DR095411 STRR1_20_G09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_20_G09_A033 5', mRNA sequence
Length = 853
Score = 312 bits (676), Expect(2) = e-106
Identities = 116/151 (76%), Positives = 135/151 (89%)
Frame = +3 / +1
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D RWCLPGT+TVTATN CPPNY LP+D+GGWCNPP HFDMA+PAF ++A YR+GIVP+
Sbjct: 310 SDPRWCLPGTVTVTATNLCPPNYALPNDNGGWCNPPLQHFDMAQPAFQQLAIYRSGIVPI 489
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRRVPCV+KGG+RFTING+SYFNLVL+TNV GAGDV +VSI+GS TGWQPMSRNWGQNW
Sbjct: 490 IFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNWGQNW 669
Query: 555 QSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
QSNSYL+ Q+LSFQV+ SDGRT+TS A PA
Sbjct: 670 QSNSYLNGQSLSFQVSTSDGRTITSYNAAPA 762
Score = 239 bits (517), Expect = 2e-062
Identities = 106/157 (67%), Positives = 112/157 (71%)
Frame = -2 / -3
Query: 685 NWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVRE 506
N PS VWPNCQ AG A V V PSL +TW E C + ELLCQF PQ RD+GC PV E
Sbjct: 800 NCSPSNVWPNCQFAGAAL*EVMVLPSLVLTWKERLCPFK*ELLCQFCPQLRDIGCQPVLE 621
Query: 505 PRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAG 326
P MET TSPAP TLV ST+LK*E PL+VNR PPF THGTLLN GTMP Y A KAG
Sbjct: 620 PLMETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMPLLYIASC*KAG 441
Query: 325 SAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
AMSKC RGGLH PP SLGR *LGG + VAVTV VPG
Sbjct: 440 *AMSKCWRGGLHHPPLSLGRA*LGGHRFVAVTVTVPG 330
Score = 94.1 bits (199), Expect(2) = e-106
Identities = 33/44 (75%), Positives = 41/44 (93%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
T GGACGYGNLYS GYGT+TAALSTALFN+GA CG+CY+++C++
Sbjct: 175 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKCND 306
>gb|DR021085.1|DR021085 STRS1_42_F09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_42_F09_A034 3', mRNA sequence
Length = 848
Score = 312 bits (676), Expect(2) = e-106
Identities = 116/151 (76%), Positives = 135/151 (89%)
Frame = +3 / -3
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D RWCLPGT+TVTATN CPPNY LP+D+GGWCNPP HFDMA+PAF ++A YR+GIVP+
Sbjct: 522 SDPRWCLPGTVTVTATNLCPPNYALPNDNGGWCNPPLQHFDMAQPAFQQLAIYRSGIVPI 343
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRRVPCV+KGG+RFTING+SYFNLVL+TNV GAGDV +VSI+GS TGWQPMSRNWGQNW
Sbjct: 342 IFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNWGQNW 163
Query: 555 QSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
QSNSYL+ Q+LSFQV+ SDGRT+TS A PA
Sbjct: 162 QSNSYLNGQSLSFQVSTSDGRTITSYNAAPA 70
Score = 239 bits (517), Expect = 2e-062
Identities = 106/157 (67%), Positives = 112/157 (71%)
Frame = -2 / +2
Query: 685 NWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVRE 506
N PS VWPNCQ AG A V V PSL +TW E C + ELLCQF PQ RD+GC PV E
Sbjct: 32 NCSPSNVWPNCQFAGAAL*EVMVLPSLVLTWKERLCPFK*ELLCQFCPQLRDIGCQPVLE 211
Query: 505 PRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAG 326
P MET TSPAP TLV ST+LK*E PL+VNR PPF THGTLLN GTMP Y A KAG
Sbjct: 212 PLMETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMPLLYIASC*KAG 391
Query: 325 SAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
AMSKC RGGLH PP SLGR *LGG + VAVTV VPG
Sbjct: 392 *AMSKCWRGGLHHPPLSLGRA*LGGHRFVAVTVTVPG 502
Score = 94.1 bits (199), Expect(2) = e-106
Identities = 33/44 (75%), Positives = 41/44 (93%)
Frame = +3 / -3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
T GGACGYGNLYS GYGT+TAALSTALFN+GA CG+CY+++C++
Sbjct: 657 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKCND 526
>gb|CF668294.1|CF668294 RTCNT1_35_D04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_35_D04_A029 5', mRNA sequence
Length = 751
Score = 312 bits (676), Expect(2) = e-106
Identities = 116/151 (76%), Positives = 135/151 (89%)
Frame = +3 / +1
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D RWCLPGT+TVTATN CPPNY LP+D+GGWCNPP HFDMA+PAF ++A YR+GIVP+
Sbjct: 178 SDPRWCLPGTVTVTATNLCPPNYALPNDNGGWCNPPLQHFDMAQPAFQQLAIYRSGIVPI 357
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRRVPCV+KGG+RFTING+SYFNLVL+TNV GAGDV +VSI+GS TGWQPMSRNWGQNW
Sbjct: 358 IFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNWGQNW 537
Query: 555 QSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
QSNSYL+ Q+LSFQV+ SDGRT+TS A PA
Sbjct: 538 QSNSYLNGQSLSFQVSTSDGRTITSYNAAPA 630
Score = 238 bits (514), Expect(2) = 4e-064
Identities = 106/157 (67%), Positives = 112/157 (71%)
Frame = -2 / -3
Query: 685 NWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVRE 506
N PS VWPNCQ AG A V V PSL +TW E C + ELLCQF PQ RD+GC PV E
Sbjct: 668 N*SPSNVWPNCQFAGAAL*DVMVLPSLVLTWKERLCPFK*ELLCQFCPQLRDIGCQPVLE 489
Query: 505 PRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAG 326
P MET TSPAP TLV ST+LK*E PL+VNR PPF THGTLLN GTMP Y A KAG
Sbjct: 488 PLMETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMPLLYIASC*KAG 309
Query: 325 SAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
AMSKC RGGLH PP SLGR *LGG + VAVTV VPG
Sbjct: 308 *AMSKCWRGGLHHPPLSLGRA*LGGHRFVAVTVTVPG 198
Score = 94.1 bits (199), Expect(2) = e-106
Identities = 33/44 (75%), Positives = 41/44 (93%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
T GGACGYGNLYS GYGT+TAALSTALFN+GA CG+CY+++C++
Sbjct: 43 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKCND 174
Score = 27.6 bits (54), Expect(2) = 4e-064
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2 / -3
Query: 175 QDPHAAPSLNSAVLSAA 125
Q PH AP L SAVL AA
Sbjct: 152 QAPHVAPLLKSAVLRAA 102
>gb|CO197872.1|CO197872 GEO1_9_E12.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_9_E12_A029 5', mRNA sequence
Length = 812
Score = 385 bits (834), Expect = e-106
Identities = 144/194 (74%), Positives = 169/194 (87%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGTSTAALSTALFN+G +CG+C+ +RC++D +WCLPG I VTATN
Sbjct: 213 TMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIRCNDDPQWCLPGAIVVTATN 392
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP++ GGWCNPP HFD++EP F IA++RAGIVPV ++RVPC + GGIRFT+
Sbjct: 393 FCPPNNALPNNAGGWCNPPLQHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTV 572
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHSYFNLVL+TNV GAGDV +VSI+GSRTGWQPMSRNWGQNWQSNSYL+ Q+LSF+VT
Sbjct: 573 NGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTT 752
Query: 606 SDGRTVTSNGAVPA 647
SDGRTVTS A P+
Sbjct: 753 SDGRTVTSYNAAPS 794
Score = 226 bits (488), Expect = 2e-058
Identities = 106/180 (58%), Positives = 111/180 (61%)
Frame = -2 / -2
Query: 664 WPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETER 485
WPNCQ G A VTV PSL VT E C R LLCQFWPQ RD+GCHPV EP MET
Sbjct: 811 WPNCQLLGAAL*EVTVLPSLVVTLKERLCPLR*LLLCQFWPQLRDIGCHPVLEPFMETAW 632
Query: 484 TSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCG 305
TSPAP TLV TRLK ECP VNR+PP GTL TGTMPA A+ K GS SKC
Sbjct: 631 TSPAPPTLVMRTRLKYECPFTVNRIPPDLWQGTL*YITGTMPALNLAICWKTGSERSKCW 452
Query: 304 RGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
RGGLHQPP+ LG LGGQKLVAVT + PG Q P P L SAVL AA
Sbjct: 451 RGGLHQPPALLGSALLGGQKLVAVTTIAPGRHHCGSSLHRIAKQAPQLRPLLKSAVLRAA 272
>gb|CX649938.1|CX649938 COLD1_42_B01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_42_B01_A029 5', mRNA sequence
Length = 862
Score = 385 bits (834), Expect = e-106
Identities = 144/194 (74%), Positives = 169/194 (87%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGTSTAALSTALFN+G +CG+C+ +RC++D +WCLPG I VTATN
Sbjct: 196 TMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIRCNDDPQWCLPGAIVVTATN 375
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP++ GGWCNPP HFD++EP F IA++RAGIVPV ++RVPC + GGIRFT+
Sbjct: 376 FCPPNNALPNNAGGWCNPPLQHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTV 555
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHSYFNLVL+TNV GAGDV +VSI+GSRTGWQPMSRNWGQNWQSNSYL+ Q+LSF+VT
Sbjct: 556 NGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTT 735
Query: 606 SDGRTVTSNGAVPA 647
SDGRTVTS A P+
Sbjct: 736 SDGRTVTSYNAAPS 777
Score = 234 bits (505), Expect = 9e-061
Identities = 109/184 (59%), Positives = 115/184 (62%)
Frame = -2 / -3
Query: 676 PSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRM 497
P+KVWPNCQ G A VTV PSL VT E C R LLCQFWPQ RD+GCHPV EP M
Sbjct: 806 PAKVWPNCQLLGAAL*EVTVLPSLVVTLKERLCPLR*LLLCQFWPQLRDIGCHPVLEPFM 627
Query: 496 ETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAM 317
ET TSPAP TLV TRLK ECP VNR+PP GTL TGTMPA A+ K GS
Sbjct: 626 ETAWTSPAPPTLVMRTRLKYECPFTVNRIPPDLWQGTL*YITGTMPALNLAICWKTGSER 447
Query: 316 SKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAV 137
SKC RGGLHQPP+ LG LGGQKLVAVT + PG Q P P L SAV
Sbjct: 446 SKCWRGGLHQPPALLGSALLGGQKLVAVTTIAPGRHHCGSSLHRIAKQAPQLRPLLKSAV 267
Query: 136 LSAA 125
L AA
Sbjct: 266 LRAA 255
>gb|DR181356.1|DR181356 RTMNUT1_38_A01.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_38_A01_A029 5', mRNA sequence
Length = 765
Score = 384 bits (833), Expect = e-106
Identities = 144/193 (74%), Positives = 168/193 (87%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGTSTAALSTALFN+G +CG+C+ +RC++D +WCLPG I VTATN
Sbjct: 172 TMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIRCNDDPQWCLPGAIVVTATN 351
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP++ GGWCNPP HFD++EP F IA++RAGIVPV ++RVPC + GGIRFT+
Sbjct: 352 FCPPNNALPNNAGGWCNPPLQHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTV 531
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHSYFNLVL+TNV GAGDV +VSI+GSRTGWQPMSRNWGQNWQSNSYL+ Q+LSF+VT
Sbjct: 532 NGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTT 711
Query: 606 SDGRTVTSNGAVP 644
SDGRTVTS A P
Sbjct: 712 SDGRTVTSYNAAP 750
Score = 218 bits (470), Expect = 6e-056
Identities = 104/178 (58%), Positives = 109/178 (61%)
Frame = -2 / -2
Query: 658 NCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTS 479
NCQ G A VTV PSL VT E C R LLCQFWPQ RD+GCHPV EP MET TS
Sbjct: 764 NCQLLGAAL*EVTVLPSLVVTLKERLCPLR*LLLCQFWPQLRDIGCHPVLEPFMETAWTS 585
Query: 478 PAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRG 299
PAP TLV TRLK ECP VNR+PP GTL TGTMPA A+ K GS SKC RG
Sbjct: 584 PAPPTLVMRTRLKYECPFTVNRIPPDLWQGTL*YITGTMPALNLAICWKTGSERSKCWRG 405
Query: 298 GLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
GLHQPP+ LG LGGQKLVAVT + PG Q P P L SAVL AA
Sbjct: 404 GLHQPPALLGSALLGGQKLVAVTTIAPGRHHCGSSLHRIAKQAPQLRPLLKSAVLRAA 231
>gb|CF471926.1|CF471926 RTDS1_7_A08.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_7_A08_A015 5', mRNA sequence
Length = 751
Score = 311 bits (674), Expect(2) = e-106
Identities = 116/151 (76%), Positives = 134/151 (88%)
Frame = +3 / +3
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D RWCLPGT+TVTATN CPPNY LP+D+GGWCNPP HFDMA+PAF + A YR+GIVP+
Sbjct: 225 SDPRWCLPGTVTVTATNLCPPNYALPNDNGGWCNPPLQHFDMAQPAFQQFAIYRSGIVPI 404
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRRVPCV+KGG+RFTING+SYFNLVL+TNV GAGDV +VSI+GS TGWQPMSRNWGQNW
Sbjct: 405 IFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNWGQNW 584
Query: 555 QSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
QSNSYL+ Q+LSFQV+ SDGRT+TS A PA
Sbjct: 585 QSNSYLNGQSLSFQVSTSDGRTITSYNAAPA 677
Score = 238 bits (515), Expect = 4e-062
Identities = 106/157 (67%), Positives = 112/157 (71%)
Frame = -2 / -1
Query: 685 NWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVRE 506
N PS VWPNCQ AG A V V PSL +TW E C + ELLCQF PQ RD+GC PV E
Sbjct: 715 NCSPSNVWPNCQFAGAAL*DVMVLPSLVLTWKERLCPFK*ELLCQFCPQLRDIGCQPVLE 536
Query: 505 PRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAG 326
P MET TSPAP TLV ST+LK*E PL+VNR PPF THGTLLN GTMP Y A KAG
Sbjct: 535 PLMETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMPLLYIANC*KAG 356
Query: 325 SAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
AMSKC RGGLH PP SLGR *LGG + VAVTV VPG
Sbjct: 355 *AMSKCWRGGLHHPPLSLGRA*LGGHRFVAVTVTVPG 245
Score = 94.1 bits (199), Expect(2) = e-106
Identities = 33/44 (75%), Positives = 41/44 (93%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
T GGACGYGNLYS GYGT+TAALSTALFN+GA CG+CY+++C++
Sbjct: 90 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKCND 221
>gb|CO169500.1|CO169500 NDL1_7_B04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_B04_A029 5', mRNA sequence
Length = 810
Score = 309 bits (669), Expect(2) = e-105
Identities = 116/152 (76%), Positives = 135/152 (88%)
Frame = +3 / +1
Query: 192 DNDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVP 371
++D +WCL GT+TVTATNFCPPNY LP+D+GGWCNPP HFDMA+PAFL+IA Y+ GIVP
Sbjct: 331 ESDPQWCLRGTVTVTATNFCPPNYALPNDNGGWCNPPLQHFDMAQPAFLQIAIYKGGIVP 510
Query: 372 VAFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQN 551
+ FRRVPCV+KGG+RFTINGHSYFNLVL+TNVA AGDV +VSI+GS TGWQ MSRNWGQN
Sbjct: 511 IMFRRVPCVRKGGVRFTINGHSYFNLVLITNVADAGDVEAVSIKGSNTGWQEMSRNWGQN 690
Query: 552 WQSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
WQSNSYL+ Q+LSF+VT+SDGRTVTS PA
Sbjct: 691 WQSNSYLNGQSLSFRVTSSDGRTVTSYNVAPA 786
Score = 225 bits (485), Expect = 5e-058
Identities = 102/150 (68%), Positives = 107/150 (71%)
Frame = -2 / -2
Query: 667 VWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETE 488
VWPNCQ AG VTV PSL VT E C + ELLCQF PQ RD+ C PV EP MET
Sbjct: 806 VWPNCQFAGATL*EVTVLPSLLVTRKERLCPFK*ELLCQFCPQLRDISCQPVLEPLMETA 627
Query: 487 RTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKC 308
TSPA ATLV ST+LK*ECPL+VNR PPF THGTL N GTMP A+ RKAG AMSKC
Sbjct: 626 STSPASATLVMSTKLK*ECPLIVNRTPPFLTHGTLRNIMGTMPPL*MAICRKAG*AMSKC 447
Query: 307 GRGGLHQPPSSLGRP*LGGQKLVAVTVMVP 218
RGGLH PP SLG * GGQKLVAVTV VP
Sbjct: 446 WRGGLHHPPLSLGSA*FGGQKLVAVTVTVP 357
Score = 94.1 bits (199), Expect(2) = e-105
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDND 200
T GGACGYGNLYS GYGT+TAALSTALFN+G CG+CYE++C+++
Sbjct: 199 TMGGACGYGNLYSQGYGTNTAALSTALFNNGLTCGACYEMKCNHE 333
>gb|DR010861.1|DR010861 HEAT1_1_F12.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_1_F12_A029 5', mRNA sequence
Length = 733
Score = 381 bits (827), Expect = e-105
Identities = 140/194 (72%), Positives = 170/194 (87%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGT TAALSTALFN+G +CG+CYE++C++D +WCLPGT+ +TATN
Sbjct: 134 TMGGACGYGNLYSQGYGTDTAALSTALFNNGFSCGACYEMKCNDDPQWCLPGTVRITATN 313
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP+D+GGWCNPP HFDMAEPAF +IA+Y++GIVP+ +RRVPC++KGGIRFTI
Sbjct: 314 FCPPNNALPNDNGGWCNPPLQHFDMAEPAFEKIAKYKSGIVPILYRRVPCLRKGGIRFTI 493
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
GHSYFNLVL++NV GAGDV++VSI+ S+TGWQPMSRNWGQNWQSNS L+ Q+LSF+VT
Sbjct: 494 AGHSYFNLVLISNVGGAGDVQAVSIKSSKTGWQPMSRNWGQNWQSNSLLNGQSLSFKVTT 673
Query: 606 SDGRTVTSNGAVPA 647
SDGRT S P+
Sbjct: 674 SDGRTTVSYNTAPS 715
Score = 212 bits (458), Expect = 3e-054
Identities = 101/180 (56%), Positives = 109/180 (60%)
Frame = -2 / -2
Query: 664 WPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETER 485
WPNCQ G VRPSL VT + C ELLCQF PQ RD+GC PV E +ET
Sbjct: 732 WPNCQLEGAVLYETVVRPSLVVTLKDRLCPFNKELLCQFCPQLRDIGCQPVFELFIETAW 553
Query: 484 TSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCG 305
TSPAP TL STRLK E P +V R+PPF HGTLL GT+P Y A+ KAGSAMSKC
Sbjct: 552 TSPAPPTLEMSTRLKYEWPAIVKRIPPFLKHGTLL*RIGTIPLLYLAIFSKAGSAMSKCC 373
Query: 304 RGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
GGLH PP SLGR GGQK VAV + VPG *Q P P LN AVLSAA
Sbjct: 372 NGGLHHPPLSLGRALFGGQKFVAVILTVPGKHHWGSSLHFIS*QAPQLNPLLNRAVLSAA 193
>gb|DR070312.1|DR070312 RTDK1_12_C03.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_12_C03_A029 5', mRNA sequence
Length = 710
Score = 381 bits (826), Expect = e-105
Identities = 143/191 (74%), Positives = 167/191 (87%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGTSTAALSTALFN+G +CG+C+ +RC++D +WCLPG I VTATN
Sbjct: 135 TMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIRCNDDPQWCLPGAIVVTATN 314
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP++ GGWCNPP HFD++EP F IA++RAGIVPV ++RVPC + GGIRFT+
Sbjct: 315 FCPPNNALPNNAGGWCNPPLQHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTV 494
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHSYFNLVL+TNV GAGDV +VSI+GSRTGWQPMSRNWGQNWQSNSYL+ Q+LSF+VT
Sbjct: 495 NGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTT 674
Query: 606 SDGRTVTSNGA 638
SDGRTVTS A
Sbjct: 675 SDGRTVTSYNA 707
Score = 210 bits (454), Expect = 1e-053
Identities = 99/167 (59%), Positives = 104/167 (62%)
Frame = -2 / -2
Query: 625 VTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTR 446
VTV PSL VT E C R LLCQFWPQ RD+GCHPV EP MET TSPAP TLV TR
Sbjct: 694 VTVLPSLVVTLKERLCPLR*LLLCQFWPQLRDIGCHPVLEPFMETAWTSPAPPTLVMRTR 515
Query: 445 LK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGR 266
LK ECP VNR+PP GTL TGTMPA A+ K GS SKC RGGLHQPP+ LG
Sbjct: 514 LKYECPFTVNRIPPDLWQGTL*YITGTMPALNLAICWKTGSERSKCWRGGLHQPPALLGS 335
Query: 265 P*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
LGGQKLVAVT + PG Q P P L SAVL AA
Sbjct: 334 ALLGGQKLVAVTTIAPGRHHCGSSLHRIAKQAPQLRPLLKSAVLRAA 194
>gb|DT624714.1|DT624714 EST1159049 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAI31 5' end, mRNA sequence
Length = 844
Score = 305 bits (660), Expect(2) = e-105
Identities = 114/152 (75%), Positives = 131/152 (86%)
Frame = +3 / +2
Query: 192 DNDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVP 371
++D +WCLPGT+TVTATN CPPN LP+D+GGWCNPP HFDMA+PAF I YR+GIVP
Sbjct: 305 ESDPQWCLPGTVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQHIPIYRSGIVP 484
Query: 372 VAFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQN 551
+ FRRVPCV+KGG+RFTINGHSYFNLVL+TNV GAGDV +VSI+GS TGWQ MSRNWGQN
Sbjct: 485 IMFRRVPCVRKGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQAMSRNWGQN 664
Query: 552 WQSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
WQSNSYL+ Q+LSFQVT SDGRT+TS PA
Sbjct: 665 WQSNSYLNGQSLSFQVTTSDGRTITSYNVAPA 760
Score = 239 bits (516), Expect = 3e-062
Identities = 104/157 (66%), Positives = 112/157 (71%)
Frame = -2 / -2
Query: 685 NWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVRE 506
N PS VWPNCQ AG V V PSL VTW E C + ELLCQF PQ RD+ C PV +
Sbjct: 798 NCSPSNVWPNCQFAGATL*EVMVLPSLVVTWKERLCPFK*ELLCQFCPQLRDIACQPVLD 619
Query: 505 PRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAG 326
P MET TSPAP TLV ST+LK*ECPL+VNR PPF THGTLLN GT+P Y + KAG
Sbjct: 618 PLMETASTSPAPPTLVMSTKLK*ECPLIVNRTPPFLTHGTLLNMIGTIPLLYMGIC*KAG 439
Query: 325 SAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
AMSKC RGGLH PP SLGR LGGQ+LVAVTV VPG
Sbjct: 438 *AMSKCWRGGLHHPPLSLGRAELGGQRLVAVTVTVPG 328
Score = 96.8 bits (205), Expect(2) = e-105
Identities = 34/45 (75%), Positives = 43/45 (95%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDND 200
T GGACGYGNLYS GYGT+TAALSTALFN+GA+CG+CYE++C+++
Sbjct: 173 TMGGACGYGNLYSQGYGTNTAALSTALFNNGASCGACYEMKCNHE 307
>gb|CV144435.1|CV144435 EST855644 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPID557 5' end, mRNA sequence
Length = 769
Score = 305 bits (660), Expect(2) = e-105
Identities = 114/152 (75%), Positives = 131/152 (86%)
Frame = +3 / +2
Query: 192 DNDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVP 371
++D +WCLPGT+TVTATN CPPN LP+D+GGWCNPP HFDMA+PAF I YR+GIVP
Sbjct: 305 ESDPQWCLPGTVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQHIPIYRSGIVP 484
Query: 372 VAFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQN 551
+ FRRVPCV+KGG+RFTINGHSYFNLVL+TNV GAGDV +VSI+GS TGWQ MSRNWGQN
Sbjct: 485 IMFRRVPCVRKGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQAMSRNWGQN 664
Query: 552 WQSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
WQSNSYL+ Q+LSFQVT SDGRT+TS PA
Sbjct: 665 WQSNSYLNGQSLSFQVTTSDGRTITSYNVAPA 760
Score = 220 bits (474), Expect = 2e-056
Identities = 97/147 (65%), Positives = 105/147 (71%)
Frame = -2 / -2
Query: 655 CQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSP 476
CQ AG V V PSL VTW E C + ELLCQF PQ RD+ C PV +P MET TSP
Sbjct: 768 CQFAGATL*EVMVLPSLVVTWKERLCPFK*ELLCQFCPQLRDIACQPVLDPLMETASTSP 589
Query: 475 APATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGG 296
AP TLV ST+LK*ECPL+VNR PPF THGTLLN GT+P Y + KAG AMSKC RGG
Sbjct: 588 APPTLVMSTKLK*ECPLIVNRTPPFLTHGTLLNMIGTIPLLYMGIC*KAG*AMSKCWRGG 409
Query: 295 LHQPPSSLGRP*LGGQKLVAVTVMVPG 215
LH PP SLGR LGGQ+LVAVTV VPG
Sbjct: 408 LHHPPLSLGRAELGGQRLVAVTVTVPG 328
Score = 96.8 bits (205), Expect(2) = e-105
Identities = 34/45 (75%), Positives = 43/45 (95%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDND 200
T GGACGYGNLYS GYGT+TAALSTALFN+GA+CG+CYE++C+++
Sbjct: 173 TMGGACGYGNLYSQGYGTNTAALSTALFNNGASCGACYEMKCNHE 307
>gb|DR685073.1|DR685073 EST1075150 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAZ77 3' end, mRNA sequence
Length = 848
Score = 306 bits (663), Expect(2) = e-104
Identities = 115/151 (76%), Positives = 130/151 (86%)
Frame = +3 / +3
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D +WCLPGT+TVTATN CPPN LP+D+GGWCNPP HFDMA+PAF IA YR+GIVP+
Sbjct: 372 SDPQWCLPGTVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQHIATYRSGIVPI 551
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRRVPCV+KGG+RFTINGH YFNLVL+TNV GAGDV +VSI+GS TGWQ MSRNWGQNW
Sbjct: 552 IFRRVPCVRKGGVRFTINGHPYFNLVLITNVGGAGDVEAVSIKGSNTGWQAMSRNWGQNW 731
Query: 555 QSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
QSNSYL+ QALSFQVT SDGRT+TS PA
Sbjct: 732 QSNSYLNGQALSFQVTTSDGRTITSYNVAPA 824
Score = 232 bits (502), Expect = 2e-060
Identities = 102/151 (67%), Positives = 109/151 (72%)
Frame = -2 / -2
Query: 667 VWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETE 488
VWPNCQ AG V V PSL VTW + AC + ELLCQF PQ RD+ C PV EP MET
Sbjct: 844 VWPNCQFAGATL*EVMVLPSLVVTWKDRACPFK*ELLCQFCPQLRDIACQPVLEPLMETA 665
Query: 487 RTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKC 308
TSPAP TLV ST+LK* CPL+VNR PPF THGTLL GTMP Y A+ KAG AMSKC
Sbjct: 664 STSPAPPTLVMSTKLK*GCPLIVNRTPPFLTHGTLLKMIGTMPLLYVAIC*KAG*AMSKC 485
Query: 307 GRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
RGGLH PP SLGR LGGQ+LVAVTV VPG
Sbjct: 484 WRGGLHHPPLSLGRAELGGQRLVAVTVTVPG 392
Score = 94.1 bits (199), Expect(2) = e-104
Identities = 33/44 (75%), Positives = 41/44 (93%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
T GGACGYGNLYS GYGT+TAALSTALFN+GA CG+CY+++C++
Sbjct: 237 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKCNH 368
>gb|DT624311.1|DT624311 EST1158586 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAD27 5' end, mRNA sequence
Length = 886
Score = 303 bits (656), Expect(2) = e-103
Identities = 114/151 (75%), Positives = 129/151 (85%)
Frame = +3 / +3
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D +WCLPGT+TVTATN CPPN LP+D+GGWCNPP HFDMA+PAF IA YR+GIVP+
Sbjct: 327 SDPQWCLPGTVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQHIAIYRSGIVPI 506
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRRVPCV+KGG+RFTINGHSYFNLVL+TNV GAGDV +VSI+GS TGWQ MSRNWGQNW
Sbjct: 507 MFRRVPCVRKGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQAMSRNWGQNW 686
Query: 555 QSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
QSNSYL+ Q LSFQVT SDGR +TS PA
Sbjct: 687 QSNSYLNGQTLSFQVTTSDGRIITSYNVAPA 779
Score = 241 bits (520), Expect = 8e-063
Identities = 104/157 (66%), Positives = 113/157 (71%)
Frame = -2 / -1
Query: 685 NWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVRE 506
N PS VWPNCQ AG V + PSL VTW E C + ELLCQF PQ RD+ C PV +
Sbjct: 817 NCSPSNVWPNCQFAGATL*EVMILPSLVVTWKERVCPFK*ELLCQFCPQLRDIACQPVLD 638
Query: 505 PRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAG 326
P MET TSPAP TLV ST+LK*ECPL+VNR PPF THGTLLN GT+P Y A+ KAG
Sbjct: 637 PLMETASTSPAPPTLVMSTKLK*ECPLIVNRTPPFLTHGTLLNMIGTIPLLYMAIC*KAG 458
Query: 325 SAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
AMSKC RGGLH PP SLGR LGGQ+LVAVTV VPG
Sbjct: 457 *AMSKCWRGGLHHPPLSLGRAELGGQRLVAVTVTVPG 347
Score = 94.1 bits (199), Expect(2) = e-103
Identities = 33/44 (75%), Positives = 41/44 (93%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
T GGACGYGNLYS GYGT+TAALSTALFN+G+ CG+CYE++C++
Sbjct: 192 TMGGACGYGNLYSQGYGTNTAALSTALFNNGSTCGACYEMKCNH 323
>gb|CX648930.1|CX648930 COLD1_31_H02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_31_H02_A029 5', mRNA sequence
Length = 857
Score = 301 bits (651), Expect(2) = e-103
Identities = 111/151 (73%), Positives = 130/151 (86%)
Frame = +3 / +1
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D +WCLPGT+TVTATN CPPN LP+D+GGWCNPP HFDMA+PAF +IA YR+GIVP+
Sbjct: 349 SDSQWCLPGTVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQKIAIYRSGIVPI 528
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRR+PCV++GG+RFTINGHSYFNLVL+TNV GAGDV +VSI+GS TGWQ MSRNWGQNW
Sbjct: 529 MFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNWGQNW 708
Query: 555 QSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
QSNSYL+ Q LSFQV+ SDGR +TS PA
Sbjct: 709 QSNSYLNGQTLSFQVSTSDGRIITSYNVAPA 801
Score = 235 bits (508), Expect = 3e-061
Identities = 103/157 (65%), Positives = 111/157 (70%)
Frame = -2 / -1
Query: 685 NWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVRE 506
N PS VWPNCQ AG V + PSL +TW E C + ELLCQF PQ RD+ C PV E
Sbjct: 839 N*TPSNVWPNCQFAGATL*EVMILPSLVLTWKERVCPFK*ELLCQFCPQLRDIVCQPVLE 660
Query: 505 PRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAG 326
P MET TSPAP TLV ST+LK*ECPL+VNR PP THG LLN GTMP Y A+ KAG
Sbjct: 659 PLMETASTSPAPPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIF*KAG 480
Query: 325 SAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
AMSKC RGGLH PP SLGR LGGQ+LVAVTV VPG
Sbjct: 479 CAMSKCWRGGLHHPPLSLGRAELGGQRLVAVTVTVPG 369
Score = 95.5 bits (202), Expect(2) = e-103
Identities = 34/44 (77%), Positives = 41/44 (93%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
T GGACGYGNLYS GYGT+TAALSTALFN+GA CG+CYE++C++
Sbjct: 214 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKCND 345
>gb|DR050310.1|DR050310 RTBOR1_22_D04.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_22_D04_A029 5', mRNA sequence
Length = 806
Score = 301 bits (651), Expect(2) = e-103
Identities = 111/151 (73%), Positives = 130/151 (86%)
Frame = +3 / +2
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D +WCLPGT+TVTATN CPPN LP+D+GGWCNPP HFDMA+PAF +IA YR+GIVP+
Sbjct: 347 SDSQWCLPGTVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQKIAIYRSGIVPI 526
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRR+PCV++GG+RFTINGHSYFNLVL+TNV GAGDV +VSI+GS TGWQ MSRNWGQNW
Sbjct: 527 MFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNWGQNW 706
Query: 555 QSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
QSNSYL+ Q LSFQV+ SDGR +TS PA
Sbjct: 707 QSNSYLNGQTLSFQVSTSDGRIITSYNVAPA 799
Score = 213 bits (459), Expect = 2e-054
Identities = 95/146 (65%), Positives = 103/146 (70%)
Frame = -2 / -3
Query: 652 QPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPA 473
Q AG V + PSL +TW E C + ELLCQF PQ RD+ C PV EP MET TSPA
Sbjct: 804 QFAGATL*EVMILPSLVLTWKERVCPFK*ELLCQFCPQLRDIVCQPVLEPLMETASTSPA 625
Query: 472 PATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGL 293
P TLV ST+LK*ECPL+VNR PP THG LLN GTMP Y A+ KAG AMSKC RGGL
Sbjct: 624 PPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIF*KAGCAMSKCWRGGL 445
Query: 292 HQPPSSLGRP*LGGQKLVAVTVMVPG 215
H PP SLGR LGGQ+LVAVTV VPG
Sbjct: 444 HHPPLSLGRAELGGQRLVAVTVTVPG 367
Score = 95.5 bits (202), Expect(2) = e-103
Identities = 34/44 (77%), Positives = 41/44 (93%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
T GGACGYGNLYS GYGT+TAALSTALFN+GA CG+CYE++C++
Sbjct: 212 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKCND 343
>gb|CO367487.1|CO367487 RTK1_34_D03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_34_D03_A029 5', mRNA sequence
Length = 788
Score = 301 bits (651), Expect(2) = e-103
Identities = 111/151 (73%), Positives = 130/151 (86%)
Frame = +3 / +1
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D +WCLPGT+TVTATN CPPN LP+D+GGWCNPP HFDMA+PAF +IA YR+GIVP+
Sbjct: 325 SDSQWCLPGTVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQKIAIYRSGIVPI 504
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRR+PCV++GG+RFTINGHSYFNLVL+TNV GAGDV +VSI+GS TGWQ MSRNWGQNW
Sbjct: 505 MFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNWGQNW 684
Query: 555 QSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
QSNSYL+ Q LSFQV+ SDGR +TS PA
Sbjct: 685 QSNSYLNGQTLSFQVSTSDGRIITSYNVAPA 777
Score = 220 bits (474), Expect = 2e-056
Identities = 97/148 (65%), Positives = 105/148 (70%)
Frame = -2 / -1
Query: 658 NCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTS 479
NCQ AG V + PSL +TW E C + ELLCQF PQ RD+ C PV EP MET TS
Sbjct: 788 NCQFAGATL*EVMILPSLVLTWKERVCPFK*ELLCQFCPQLRDIVCQPVLEPLMETASTS 609
Query: 478 PAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRG 299
PAP TLV ST+LK*ECPL+VNR PP THG LLN GTMP Y A+ KAG AMSKC RG
Sbjct: 608 PAPPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIF*KAGCAMSKCWRG 429
Query: 298 GLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
GLH PP SLGR LGGQ+LVAVTV VPG
Sbjct: 428 GLHHPPLSLGRAELGGQRLVAVTVTVPG 345
Score = 95.5 bits (202), Expect(2) = e-103
Identities = 34/44 (77%), Positives = 41/44 (93%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
T GGACGYGNLYS GYGT+TAALSTALFN+GA CG+CYE++C++
Sbjct: 190 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKCND 321
>gb|DR120696.1|DR120696 RTMG1_31_G12.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_31_G12_A029 3', mRNA sequence
Length = 865
Score = 300 bits (650), Expect(2) = e-103
Identities = 111/151 (73%), Positives = 130/151 (86%)
Frame = +3 / -1
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D +WCLPGT+TVTATN CPPN LP+D+GGWCNPP HFDMA+PAF +IA YR+GIVP+
Sbjct: 511 SDSQWCLPGTVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQQIAIYRSGIVPI 332
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRR+PCV++GG+RFTINGHSYFNLVL+TNV GAGDV +VSI+GS TGWQ MSRNWGQNW
Sbjct: 331 MFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNWGQNW 152
Query: 555 QSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
QSNSYL+ Q LSFQV+ SDGR +TS PA
Sbjct: 151 QSNSYLNGQTLSFQVSTSDGRIITSYNVAPA 59
Score = 235 bits (508), Expect = 3e-061
Identities = 103/157 (65%), Positives = 111/157 (70%)
Frame = -2 / +3
Query: 685 NWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVRE 506
N PS VWPNCQ AG V + PSL +TW E C + ELLCQF PQ RD+ C PV E
Sbjct: 21 N*TPSNVWPNCQFAGATL*EVMILPSLVLTWKERVCPFK*ELLCQFCPQLRDIVCQPVLE 200
Query: 505 PRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAG 326
P MET TSPAP TLV ST+LK*ECPL+VNR PP THG LLN GTMP Y A+ KAG
Sbjct: 201 PLMETASTSPAPPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIC*KAG 380
Query: 325 SAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
AMSKC RGGLH PP SLGR LGGQ+LVAVTV VPG
Sbjct: 381 CAMSKCWRGGLHHPPLSLGRAELGGQRLVAVTVTVPG 491
Score = 95.5 bits (202), Expect(2) = e-103
Identities = 34/44 (77%), Positives = 41/44 (93%)
Frame = +3 / -1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
T GGACGYGNLYS GYGT+TAALSTALFN+GA CG+CYE++C++
Sbjct: 646 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKCND 515
>gb|CO367410.1|CO367410 RTK1_34_D03.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_34_D03_A029 3', mRNA sequence
Length = 851
Score = 301 bits (651), Expect(2) = e-102
Identities = 111/151 (73%), Positives = 130/151 (86%)
Frame = +3 / +2
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D +WCLPGT+TVTATN CPPN LP+D+GGWCNPP HFDMA+PAF +IA YR+GIVP+
Sbjct: 134 SDSQWCLPGTVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQKIAIYRSGIVPI 313
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRR+PCV++GG+RFTINGHSYFNLVL+TNV GAGDV +VSI+GS TGWQ MSRNWGQNW
Sbjct: 314 MFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNWGQNW 493
Query: 555 QSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
QSNSYL+ Q LSFQV+ SDGR +TS PA
Sbjct: 494 QSNSYLNGQTLSFQVSTSDGRIITSYNVAPA 586
Score = 235 bits (508), Expect = 3e-061
Identities = 103/157 (65%), Positives = 111/157 (70%)
Frame = -2 / -3
Query: 685 NWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVRE 506
N PS VWPNCQ AG V + PSL +TW E C + ELLCQF PQ RD+ C PV E
Sbjct: 624 N*TPSNVWPNCQFAGATL*EVMILPSLVLTWKERVCPFK*ELLCQFCPQLRDIVCQPVLE 445
Query: 505 PRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAG 326
P MET TSPAP TLV ST+LK*ECPL+VNR PP THG LLN GTMP Y A+ KAG
Sbjct: 444 PLMETASTSPAPPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIF*KAG 265
Query: 325 SAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
AMSKC RGGLH PP SLGR LGGQ+LVAVTV VPG
Sbjct: 264 CAMSKCWRGGLHHPPLSLGRAELGGQRLVAVTVTVPG 154
Score = 93.6 bits (198), Expect(2) = e-102
Identities = 33/42 (78%), Positives = 40/42 (95%)
Frame = +3 / +2
Query: 72 GGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
GGACGYGNLYS GYGT+TAALSTALFN+GA CG+CYE++C++
Sbjct: 5 GGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKCND 130
>gb|DR093671.1|DR093671 STRR1_9_E07.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_9_E07_A033 5', mRNA sequence
Length = 789
Score = 297 bits (643), Expect(2) = e-102
Identities = 110/151 (72%), Positives = 129/151 (85%)
Frame = +3 / +2
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D +WCLPGT+TVTATN CPPN LP+D+GGWC PP HFDMA+PAF +IA YR+GIVP+
Sbjct: 335 SDSQWCLPGTVTVTATNLCPPNSALPNDNGGWCYPPLQHFDMAQPAFQKIAIYRSGIVPI 514
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRR+PCV++GG+RFTINGHSYFNLVL+TNV GAGDV +VSI+GS TGWQ MSRNWGQNW
Sbjct: 515 MFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNWGQNW 694
Query: 555 QSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
QSNSYL+ Q LSFQV+ SDGR +TS PA
Sbjct: 695 QSNSYLNGQTLSFQVSTSDGRIITSYNVAPA 787
Score = 209 bits (450), Expect = 4e-053
Identities = 91/137 (66%), Positives = 99/137 (72%)
Frame = -2 / -1
Query: 625 VTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTR 446
V + PSL +TW E C + ELLCQF PQ RD+ C PV EP MET TSPAP TLV ST+
Sbjct: 765 VMILPSLVLTWKERVCPFK*ELLCQFCPQLRDIVCQPVLEPLMETASTSPAPPTLVMSTK 586
Query: 445 LK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGR 266
LK*ECPL+VNR PP THG LLN GTMP Y A+ KAG AMSKC RGG H PP SLGR
Sbjct: 585 LK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIF*KAGCAMSKCWRGG*HHPPLSLGR 406
Query: 265 P*LGGQKLVAVTVMVPG 215
LGGQ+LVAVTV VPG
Sbjct: 405 AELGGQRLVAVTVTVPG 355
Score = 95.5 bits (202), Expect(2) = e-102
Identities = 34/44 (77%), Positives = 41/44 (93%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
T GGACGYGNLYS GYGT+TAALSTALFN+GA CG+CYE++C++
Sbjct: 200 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKCND 331
>gb|DT632413.1|DT632413 EST1147344 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFJ73 3' end, mRNA sequence
Length = 826
Score = 371 bits (804), Expect = e-102
Identities = 138/194 (71%), Positives = 168/194 (86%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYS GYGT TAALSTALFN+G +CG+CYE++C +D WCLPG++TVTATN
Sbjct: 222 TMGGACGYGNLYSQGYGTDTAALSTALFNNGLSCGACYEMKCIDDPEWCLPGSVTVTATN 401
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP+++GGWCNPP HFDMAEPAF +IA+Y++GIVP+ +RRV C++KGGIRFTI
Sbjct: 402 FCPPNNALPNNNGGWCNPPLRHFDMAEPAFEKIAKYKSGIVPILYRRVLCLRKGGIRFTI 581
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NG YFNLVL++NV GAG V++VSI+GS T WQPMSRNWGQNWQSNS+L+ Q+LSF+VT
Sbjct: 582 NGLPYFNLVLISNVGGAGGVQAVSIKGSNTSWQPMSRNWGQNWQSNSFLNGQSLSFKVTT 761
Query: 606 SDGRTVTSNGAVPA 647
SDGRT+ S A P+
Sbjct: 762 SDGRTIVSYNAAPS 803
Score = 210 bits (454), Expect = 1e-053
Identities = 101/181 (55%), Positives = 111/181 (61%)
Frame = -2 / -1
Query: 667 VWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETE 488
VWPNCQ G A VRPSL VT + C + ELLCQF PQ RD+GC V +P +ET
Sbjct: 823 VWPNCQLEGAALYETIVRPSLVVTLKDRLCPFKKELLCQFCPQLRDIGCQLVFDPFIETA 644
Query: 487 RTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKC 308
T PAP TL STRLK PLMV R+PPF TLL GT+P Y A+ KAGSAMSKC
Sbjct: 643 WTPPAPPTLEMSTRLKYGRPLMVKRIPPFLKQRTLL*RMGTIPLLYLAIFSKAGSAMSKC 464
Query: 307 GRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSA 128
RGGLH PP LGR LGGQKLVAVTV +PG * P +P LN AVL A
Sbjct: 463 RRGGLHHPPLLLGRALLGGQKLVAVTVTLPGKHHSGSSIHFIS*HAPQLSPLLNKAVLRA 284
Query: 127 A 125
A
Sbjct: 283 A 281
>gb|CO368748.1|CO368748 RTK1_42_C07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_42_C07_A029 5', mRNA sequence
Length = 700
Score = 299 bits (648), Expect(2) = e-101
Identities = 112/151 (74%), Positives = 129/151 (85%)
Frame = +3 / +3
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D +WCLPGT+TVTATN CPPN LP+D+GGWCNPP HFDMA+PAF +IA YR+GIVP+
Sbjct: 174 SDPQWCLPGTVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQQIAIYRSGIVPI 353
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRRVPCV+KGG+RF INGHSYFNLVL+TNV G GDV +VSI+GS+TGWQ MSRNWGQNW
Sbjct: 354 MFRRVPCVRKGGVRFAINGHSYFNLVLITNVGGVGDVEAVSIKGSKTGWQAMSRNWGQNW 533
Query: 555 QSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
QSNSYL+ Q LSFQVT SDGRT+TS A
Sbjct: 534 QSNSYLNGQTLSFQVTTSDGRTITSYNVASA 626
Score = 235 bits (507), Expect = 5e-061
Identities = 103/157 (65%), Positives = 109/157 (69%)
Frame = -2 / -1
Query: 685 NWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVRE 506
N PS VWPNCQ A V V PSL VTW E C + ELLCQF PQ RD+ C PV E
Sbjct: 664 NCSPSNVWPNCQFAEATL*EVMVLPSLVVTWKERVCPFK*ELLCQFCPQLRDIACQPVLE 485
Query: 505 PRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAG 326
P MET TSP P TLV ST+LK*ECPL+ NR PPF THGTLLN GTMP Y A+ AG
Sbjct: 484 PLMETASTSPTPPTLVMSTKLK*ECPLIANRTPPFLTHGTLLNMIGTMPLLYMAIC*NAG 305
Query: 325 SAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
AMSKC RGGLH PP SLGR LGGQ+LVAVTV VPG
Sbjct: 304 *AMSKCWRGGLHHPPLSLGRAELGGQRLVAVTVTVPG 194
Score = 91.8 bits (194), Expect(2) = e-101
Identities = 32/43 (74%), Positives = 39/43 (90%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCD 194
T GG CGYGNLYS GYGT+TAALSTALFN+GA CG+CY+++C+
Sbjct: 39 TMGGVCGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKCN 167
>gb|DR051834.1|DR051834 RTBOR1_32_E10.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_32_E10_A029 5', mRNA sequence
Length = 796
Score = 292 bits (633), Expect(2) = e-101
Identities = 107/143 (74%), Positives = 126/143 (88%)
Frame = +3 / +3
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D +WCLPGT+TVTATN CPPN LP+D+GGWCNPP HFDMA+PAF +IA YR+GIVP+
Sbjct: 366 SDSQWCLPGTVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQKIAIYRSGIVPI 545
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRR+PCV++GG+RFTINGHSYFNLVL+TNV GAGDV +VSI+GS TGWQ MSRNWGQNW
Sbjct: 546 MFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNWGQNW 725
Query: 555 QSNSYLDRQALSFQVTASDGRTV 623
QSNSYL+ Q LSFQV+ SDGR +
Sbjct: 726 QSNSYLNGQTLSFQVSTSDGRII 794
Score = 212 bits (458), Expect = 3e-054
Identities = 92/137 (67%), Positives = 100/137 (72%)
Frame = -2 / -1
Query: 625 VTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTR 446
V + PSL +TW E C + ELLCQF PQ RD+ C PV EP MET TSPAP TLV ST+
Sbjct: 796 VMILPSLVLTWKERVCPFK*ELLCQFCPQLRDIVCQPVLEPLMETASTSPAPPTLVMSTK 617
Query: 445 LK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGR 266
LK*ECPL+VNR PP THG LLN GTMP Y A+ KAG AMSKC RGGLH PP SLGR
Sbjct: 616 LK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIF*KAGCAMSKCWRGGLHHPPLSLGR 437
Query: 265 P*LGGQKLVAVTVMVPG 215
LGGQ+LVAVTV VPG
Sbjct: 436 AELGGQRLVAVTVTVPG 386
Score = 95.5 bits (202), Expect(2) = e-101
Identities = 34/44 (77%), Positives = 41/44 (93%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
T GGACGYGNLYS GYGT+TAALSTALFN+GA CG+CYE++C++
Sbjct: 231 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKCND 362
>gb|DR096360.1|DR096360 STRR1_27_B05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_27_B05_A033 5', mRNA sequence
Length = 780
Score = 312 bits (676), Expect(2) = e-100
Identities = 116/151 (76%), Positives = 135/151 (89%)
Frame = +3 / +3
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D RWCLPGT+TVTATN CPPNY LP+D+GGWCNPP HFDMA+PAF ++A YR+GIVP+
Sbjct: 114 SDPRWCLPGTVTVTATNLCPPNYALPNDNGGWCNPPLQHFDMAQPAFQQLAIYRSGIVPI 293
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRRVPCV+KGG+RFTING+SYFNLVL+TNV GAGDV +VSI+GS TGWQPMSRNWGQNW
Sbjct: 294 IFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNWGQNW 473
Query: 555 QSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
QSNSYL+ Q+LSFQV+ SDGRT+TS A PA
Sbjct: 474 QSNSYLNGQSLSFQVSTSDGRTITSYNAAPA 566
Score = 238 bits (514), Expect(2) = 4e-064
Identities = 106/157 (67%), Positives = 112/157 (71%)
Frame = -2 / -3
Query: 685 NWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVRE 506
N PS VWPNCQ AG A V V PSL +TW E C + ELLCQF PQ RD+GC PV E
Sbjct: 604 N*SPSNVWPNCQFAGAAL*DVMVLPSLVLTWKERLCPFK*ELLCQFCPQLRDIGCQPVLE 425
Query: 505 PRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAG 326
P MET TSPAP TLV ST+LK*E PL+VNR PPF THGTLLN GTMP Y A KAG
Sbjct: 424 PLMETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMPLLYIASC*KAG 245
Query: 325 SAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
AMSKC RGGLH PP SLGR *LGG + VAVTV VPG
Sbjct: 244 *AMSKCWRGGLHHPPLSLGRA*LGGHRFVAVTVTVPG 134
Score = 74.8 bits (157), Expect(2) = e-100
Identities = 26/36 (72%), Positives = 34/36 (94%)
Frame = +3 / +3
Query: 90 GNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
GNLYS GYGT+TAALSTALFN+GA CG+CY+++C++
Sbjct: 3 GNLYSQGYGTNTAALSTALFNNGATCGACYQMKCND 110
Score = 27.6 bits (54), Expect(2) = 4e-064
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2 / -3
Query: 175 QDPHAAPSLNSAVLSAA 125
Q PH AP L SAVL AA
Sbjct: 88 QAPHVAPLLKSAVLRAA 38
>gb|DR180723.1|DR180723 RTMNUT1_34_A06.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_34_A06_A029 5', mRNA sequence
Length = 773
Score = 243 bits (525), Expect(3) = 1e-099
Identities = 85/120 (70%), Positives = 106/120 (88%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGY NLYS GYGT T ALSTALFN+G +CG+CYE++C++D +WCLPGT+ +TATN
Sbjct: 147 TMGGACGYENLYSQGYGTDTVALSTALFNNGFSCGACYEMKCNDDPQWCLPGTVRITATN 326
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP+D+GGWCNPP HFDMAEPAF +IA+Y++GIVP+ +RR+PC++KGGIRFTI
Sbjct: 327 FCPPNNALPNDNGGWCNPPLQHFDMAEPAFEKIAKYKSGIVPILYRRIPCLRKGGIRFTI 506
Score = 133 bits (285), Expect(3) = 1e-099
Identities = 51/72 (70%), Positives = 61/72 (84%)
Frame = +3 / +3
Query: 432 HSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTASD 611
HSYFNLVL++NV GAGDV++VSI+ S+TGWQPMSRNWGQNWQSNS L+ Q+LSF+VT SD
Sbjct: 510 HSYFNLVLISNVGGAGDVQAVSIKSSKTGWQPMSRNWGQNWQSNSLLNGQSLSFKVTTSD 689
Query: 612 GRTVTSNGAVPA 647
GRT S P+
Sbjct: 690 GRTTVSYNTAPS 725
Score = 111 bits (238), Expect(2) = 2e-050
Identities = 54/99 (54%), Positives = 59/99 (59%)
Frame = -2 / -2
Query: 424 MVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQK 245
+V R+PPF HG LL GT+P Y A+ KAGSAMSKC GGLH PP SLGR GGQK
Sbjct: 505 IVKRIPPFLKHGILL*RIGTIPLLYLAIFSKAGSAMSKCCNGGLHHPPLSLGRALFGGQK 326
Query: 244 LVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSA 128
VAV + VPG *Q P P LN AVLSA
Sbjct: 325 FVAVILTVPGKHHWGSSLHFIS*QAPQLNPLLNRAVLSA 209
Score = 108 bits (230), Expect(2) = 2e-050
Identities = 49/86 (56%), Positives = 52/86 (60%)
Frame = -2 / -2
Query: 691 PQNWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPV 512
P +W P VWPNCQ G VRPSL VT + C ELLCQF PQ RDMGC PV
Sbjct: 769 P*SWLPWNVWPNCQLEGAVLYETVVRPSLVVTLKDRLCPFNKELLCQFCPQLRDMGCQPV 590
Query: 511 REPRMETERTSPAPATLVTSTRLK*E 434
E +ET TSPAP TL STRLK E
Sbjct: 589 FELFIETAWTSPAPPTLEMSTRLKYE 512
Score = 27.2 bits (53), Expect(3) = 1e-099
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 650 LAVRPDLRGRPVLR 691
LA+RPD+ G+P LR
Sbjct: 728 LAIRPDIPGKPTLR 769
>gb|DT632636.1|DT632636 EST1147567 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFM16 3' end, mRNA sequence
Length = 858
Score = 254 bits (550), Expect(3) = 1e-099
Identities = 92/120 (76%), Positives = 105/120 (87%)
Frame = +3 / +2
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D +WCLPGT+TVTATN CPPN LP+D+GGWCNPP HFDMA+PAF IA YR+GIVP+
Sbjct: 380 SDPQWCLPGTVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQHIATYRSGIVPI 559
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRRVPCV+KGG+RFTINGH YFNLVL+TNV GAGDV +VSI+GS TGWQ MSRNWGQNW
Sbjct: 560 IFRRVPCVRKGGVRFTINGHPYFNLVLITNVGGAGDVEAVSIKGSNTGWQAMSRNWGQNW 739
Score = 183 bits (395), Expect(2) = 5e-055
Identities = 80/113 (70%), Positives = 85/113 (75%)
Frame = -2 / -1
Query: 553 QFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNA 374
QF PQ RD+ C PV EP MET TSPAP TLV ST+LK* CPL+VNR PPF THGTLL
Sbjct: 738 QFCPQLRDIACQPVLEPLMETASTSPAPPTLVMSTKLK*GCPLIVNRTPPFLTHGTLLKM 559
Query: 373 TGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
GTMP Y A+ KAG AMSKC RGGLH PP SLGR LGGQ+LVAVTV VPG
Sbjct: 558 IGTMPLLYVAIC*KAG*AMSKCWRGGLHHPPLSLGRAELGGQRLVAVTVTVPG 400
Score = 94.1 bits (199), Expect(3) = 1e-099
Identities = 33/44 (75%), Positives = 41/44 (93%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
T GGACGYGNLYS GYGT+TAALSTALFN+GA CG+CY+++C++
Sbjct: 245 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKCNH 376
Score = 54.7 bits (113), Expect(3) = 1e-099
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +3 / +3
Query: 555 QSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
QSNSYL+ QALSFQVT SDGRT+TS PA
Sbjct: 741 QSNSYLNGQALSFQVTTSDGRTITSYNVAPA 833
Score = 51.9 bits (107), Expect(2) = 5e-055
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = -2 / -3
Query: 667 VWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLC 554
VWPNCQ AG V V PSL VTW + AC + ELLC
Sbjct: 853 VWPNCQFAGATL*EVMVLPSLVVTWKDRACPFK*ELLC 740
>gb|DR120161.1|DR120161 RTMG1_27_H07.g2_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_27_H07_A029 5', mRNA sequence
Length = 693
Score = 353 bits (766), Expect = 9e-097
Identities = 128/175 (73%), Positives = 157/175 (89%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGY NLYS GYGT TAALSTALFN+G +CG+CYE++C++D +WCLPGT+ +TATN
Sbjct: 167 TMGGACGYENLYSQGYGTDTAALSTALFNNGFSCGACYEMKCNDDPQWCLPGTVRITATN 346
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPN LP+D+GGWCNPP HFDMAEPAF +IA+Y++GIVP+ +RR+PC++KGGIRFTI
Sbjct: 347 FCPPNNALPNDNGGWCNPPLQHFDMAEPAFEKIAKYKSGIVPILYRRIPCLRKGGIRFTI 526
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALS 590
GHSYFNLVL++NV GAGDV++VSI+ S+TGWQPMSRNWGQNWQSNS L+ Q+LS
Sbjct: 527 AGHSYFNLVLISNVGGAGDVQAVSIKSSKTGWQPMSRNWGQNWQSNSLLNGQSLS 691
Score = 182 bits (392), Expect = 4e-045
Identities = 88/152 (57%), Positives = 94/152 (61%)
Frame = -2 / -1
Query: 580 CLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPF 401
C ELLCQF PQ RDMGC PV E +ET TSPAP TL STRLK E P +V R+PPF
Sbjct: 681 CPFNKELLCQFCPQLRDMGCQPVFELFIETAWTSPAPPTLEMSTRLKYEWPAIVKRIPPF 502
Query: 400 FTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMV 221
HG LL GT+P Y A+ KAGSAMSKC GGLH PP SLGR GGQK VAV + V
Sbjct: 501 LKHGILL*RIGTIPLLYLAIFSKAGSAMSKCCNGGLHHPPLSLGRALFGGQKFVAVILTV 322
Query: 220 PGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
PG *Q P P LN AVLSAA
Sbjct: 321 PGKHHWGSSLHFIS*QAPQLNPLLNRAVLSAA 226
>gb|CO369598.1|CO369598 RTK1_48_F01.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_48_F01_A029 3', mRNA sequence
Length = 820
Score = 290 bits (627), Expect(2) = 6e-096
Identities = 108/145 (74%), Positives = 125/145 (86%)
Frame = +3 / -2
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D +WCLPGT+TVTATN CPPN LP+D+GGWCNPP HFDM +PAF +IA + GIVP+
Sbjct: 699 SDSQWCLPGTVTVTATNLCPPNLALPNDNGGWCNPPLQHFDMGQPAFQQIAICKGGIVPI 520
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRRVPCV+ GGIRFTINGHSYFNLVL+TNV GAGDV +VSI+GS TGW+ MSRNWGQNW
Sbjct: 519 MFRRVPCVRTGGIRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWEAMSRNWGQNW 340
Query: 555 QSNSYLDRQALSFQVTASDGRTVTS 629
QSNSYL+ Q+LSFQVT SDG T+TS
Sbjct: 339 QSNSYLNGQSLSFQVTTSDGSTITS 265
Score = 226 bits (488), Expect(2) = 5e-060
Identities = 101/154 (65%), Positives = 108/154 (70%)
Frame = -2 / +2
Query: 676 PSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRM 497
PSKVWPNCQ A V V PSL VTW E C + ELLCQF PQ RD+ PV EP M
Sbjct: 218 PSKVWPNCQSALATL*EVIVDPSLVVTWKERLCPFK*ELLCQFCPQLRDIASQPVLEPLM 397
Query: 496 ETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAM 317
ET TSPAP TLV ST+LK*ECPL+VNR+PP THGTL N GTMP A+ KAG M
Sbjct: 398 ETASTSPAPPTLVMSTKLK*ECPLIVNRIPPVLTHGTLRNMMGTMPPLQMAIC*KAG*PM 577
Query: 316 SKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
SKC RGGLH PP SLGR LGGQ+LVAVTV VPG
Sbjct: 578 SKCWRGGLHHPPLSLGRARLGGQRLVAVTVTVPG 679
Score = 82.2 bits (173), Expect(2) = 6e-096
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +3 / -2
Query: 84 GYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
GYGNLYS GYGT T ALSTALFN+GA CG+CYE++CD+
Sbjct: 816 GYGNLYSQGYGTDTTALSTALFNNGATCGACYEMKCDD 703
Score = 25.8 bits (50), Expect(2) = 5e-060
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2 / +2
Query: 175 QDPHAAPSLNSAVLSA 128
Q PH AP L SAVL A
Sbjct: 725 QAPHVAPLLKSAVLRA 772
>gb|CF476071.1|CF476071 RTWW2_16_D03.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_16_D03_A021 5', mRNA sequence
Length = 725
Score = 351 bits (760), Expect = 6e-096
Identities = 131/180 (72%), Positives = 156/180 (86%)
Frame = +3 / +2
Query: 108 GYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATNFCPPNYGLPSDDGG 287
GYGT TAALSTALFN+G +CG+C+ +RC++D +WCLPG I VTATNFCPPN LP++ GG
Sbjct: 5 GYGTITAALSTALFNNGLSCGACFAIRCNDDPQWCLPGAIVVTATNFCPPNNALPNNAGG 184
Query: 288 WCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLVTNV 467
WCNPP HFD++EP F IA++RAGIVPV ++RVPC + GGIRFT+NGHSYFNLVL+TNV
Sbjct: 185 WCNPPLQHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTVNGHSYFNLVLITNV 364
Query: 468 AGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
GAGDV +VSI+GSRTGWQPMSRNWGQNWQSNSYL+ Q+LSF+VT SDGRTVTS A P+
Sbjct: 365 GGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVTSYNAAPS 544
Score = 234 bits (505), Expect = 9e-061
Identities = 109/184 (59%), Positives = 115/184 (62%)
Frame = -2 / -3
Query: 676 PSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRM 497
P+KVWPNCQ G A VTV PSL VT E C R LLCQFWPQ RD+GCHPV EP M
Sbjct: 573 PAKVWPNCQLLGAAL*EVTVLPSLVVTLKERLCPLR*LLLCQFWPQLRDIGCHPVLEPFM 394
Query: 496 ETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAM 317
ET TSPAP TLV TRLK ECP VNR+PP GTL TGTMPA A+ K GS
Sbjct: 393 ETAWTSPAPPTLVMRTRLKYECPFTVNRIPPDLWQGTL*YITGTMPALNLAICWKTGSER 214
Query: 316 SKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAV 137
SKC RGGLHQPP+ LG LGGQKLVAVT + PG Q P P L SAV
Sbjct: 213 SKCWRGGLHQPPALLGSALLGGQKLVAVTTIAPGRHHCGSSLHRIAKQAPQLRPLLKSAV 34
Query: 136 LSAA 125
L AA
Sbjct: 33 LRAA 22
>gb|CX649475.1|CX649475 COLD1_35_B04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_35_B04_A029 5', mRNA sequence
Length = 670
Score = 265 bits (574), Expect(2) = 2e-095
Identities = 101/141 (71%), Positives = 121/141 (85%)
Frame = +3 / +1
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
+I VTATNFCPPNY LP+D+GGWCNPPRPHFD++ P FL++A+YRAGIVPV FRRVPCVK
Sbjct: 220 SILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVK 399
Query: 402 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQ 581
+GG+RFTING YFNLVL+TNVAGAGD+ VS++GS+TGW P+SRNWGQNWQ ++ L Q
Sbjct: 400 QGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQCSTVLVGQ 579
Query: 582 ALSFQVTASDGRTVTSNGAVP 644
+LSF+VT SD RT TS VP
Sbjct: 580 SLSFRVTGSDRRTSTSWNIVP 642
Score = 197 bits (424), Expect(2) = 8e-051
Identities = 94/147 (63%), Positives = 97/147 (65%)
Frame = -2 / -3
Query: 670 KVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMET 491
KVWPN Q GT V V SL VT E C +R L CQFWPQF D G HPV P T
Sbjct: 668 KVWPNSQFGGTMFQDVEVLRSLPVTLKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFTLT 489
Query: 490 ERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSK 311
SPAPAT V TRLK PLMVN PP FTHGTLL TGT+PARY A+ RK G SK
Sbjct: 488 LTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKIGMERSK 309
Query: 310 CGRGGLHQPPSSLGRP*LGGQKLVAVT 230
GRGGLHQPP SLGR *LGGQKLVAVT
Sbjct: 308 WGRGGLHQPPLSLGRA*LGGQKLVAVT 228
Score = 105 bits (223), Expect(2) = 2e-095
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTAT 242
T GGACGYGNLYS GYG +AALSTALFN G +CG+C+E++C ND WC PG ++ T
Sbjct: 58 TMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPGNPSILVT 234
Score = 24.4 bits (47), Expect(2) = 8e-051
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2 / -3
Query: 223 VPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
+PG Q P +P LN AVL+AA
Sbjct: 215 LPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAA 117
>gb|DR015281.1|DR015281 STRS1_2_C05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_C05_A034 5', mRNA sequence
Length = 848
Score = 265 bits (573), Expect(2) = 2e-095
Identities = 100/141 (70%), Positives = 121/141 (85%)
Frame = +3 / +2
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
+I VTATNFCPPNY LP+D+GGWCNPPRPHFD++ P FL++A+YRAGIVPV FRRVPCVK
Sbjct: 362 SILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVK 541
Query: 402 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQ 581
+GG+RFTING YFNLVL+TNVAGAGD+ VS++GS+TGW P+SRNWGQNWQ ++ L Q
Sbjct: 542 QGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQCSTVLVGQ 721
Query: 582 ALSFQVTASDGRTVTSNGAVP 644
+LSF++T SD RT TS VP
Sbjct: 722 SLSFRITGSDRRTSTSWNIVP 784
Score = 197 bits (425), Expect(2) = 6e-051
Identities = 94/149 (63%), Positives = 97/149 (65%)
Frame = -2 / -3
Query: 676 PSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRM 497
P KVWPN Q GT V V SL V E C +R L CQFWPQF D G HPV P
Sbjct: 816 PEKVWPNSQFGGTMFQDVEVLRSLPVILKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFT 637
Query: 496 ETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAM 317
T SPAPAT V TRLK PLMVN PP FTHGTLL TGT+PARY A+ RK G
Sbjct: 636 LTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKIGMER 457
Query: 316 SKCGRGGLHQPPSSLGRP*LGGQKLVAVT 230
SK GRGGLHQPP SLGR *LGGQKLVAVT
Sbjct: 456 SKWGRGGLHQPPLSLGRA*LGGQKLVAVT 370
Score = 105 bits (223), Expect(2) = 2e-095
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTAT 242
T GGACGYGNLYS GYG +AALSTALFN G +CG+C+E++C ND WC PG ++ T
Sbjct: 200 TMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPGNPSILVT 376
Score = 24.4 bits (47), Expect(2) = 6e-051
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2 / -3
Query: 223 VPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
+PG Q P +P LN AVL+AA
Sbjct: 357 LPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAA 259
>gb|DR099166.1|DR099166 STRR1_53_C12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_53_C12_A033 5', mRNA sequence
Length = 823
Score = 265 bits (573), Expect(2) = 2e-095
Identities = 100/141 (70%), Positives = 121/141 (85%)
Frame = +3 / +3
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
+I VTATNFCPPNY LP+D+GGWCNPPRPHFD++ P FL++A+YRAGIVPV FRRVPCVK
Sbjct: 180 SILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVK 359
Query: 402 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQ 581
+GG+RFTING YFNLVL+TNVAGAGD+ VS++GS+TGW P+SRNWGQNWQ ++ L Q
Sbjct: 360 QGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQCSTVLVGQ 539
Query: 582 ALSFQVTASDGRTVTSNGAVP 644
+LSF++T SD RT TS VP
Sbjct: 540 SLSFRITGSDRRTSTSWNIVP 602
Score = 197 bits (425), Expect(2) = 6e-051
Identities = 94/149 (63%), Positives = 97/149 (65%)
Frame = -2 / -1
Query: 676 PSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRM 497
P KVWPN Q GT V V SL V E C +R L CQFWPQF D G HPV P
Sbjct: 634 PEKVWPNSQFGGTMFQDVEVLRSLPVILKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFT 455
Query: 496 ETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAM 317
T SPAPAT V TRLK PLMVN PP FTHGTLL TGT+PARY A+ RK G
Sbjct: 454 LTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKIGMER 275
Query: 316 SKCGRGGLHQPPSSLGRP*LGGQKLVAVT 230
SK GRGGLHQPP SLGR *LGGQKLVAVT
Sbjct: 274 SKWGRGGLHQPPLSLGRA*LGGQKLVAVT 188
Score = 105 bits (223), Expect(2) = 2e-095
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTAT 242
T GGACGYGNLYS GYG +AALSTALFN G +CG+C+E++C ND WC PG ++ T
Sbjct: 18 TMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPGNPSILVT 194
Score = 24.4 bits (47), Expect(2) = 6e-051
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2 / -1
Query: 223 VPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
+PG Q P +P LN AVL+AA
Sbjct: 175 LPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAA 77
>gb|DR070152.1|DR070152 RTDK1_11_D01.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_11_D01_A029 5', mRNA sequence
Length = 748
Score = 265 bits (573), Expect(2) = 2e-095
Identities = 100/141 (70%), Positives = 121/141 (85%)
Frame = +3 / +2
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
+I VTATNFCPPNY LP+D+GGWCNPPRPHFD++ P FL++A+YRAGIVPV FRRVPCVK
Sbjct: 197 SILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVK 376
Query: 402 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQ 581
+GG+RFTING YFNLVL+TNVAGAGD+ VS++GS+TGW P+SRNWGQNWQ ++ L Q
Sbjct: 377 QGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQCSTVLVGQ 556
Query: 582 ALSFQVTASDGRTVTSNGAVP 644
+LSF++T SD RT TS VP
Sbjct: 557 SLSFRITGSDRRTSTSWNIVP 619
Score = 197 bits (425), Expect(2) = 6e-051
Identities = 94/149 (63%), Positives = 97/149 (65%)
Frame = -2 / -2
Query: 676 PSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRM 497
P KVWPN Q GT V V SL V E C +R L CQFWPQF D G HPV P
Sbjct: 651 PEKVWPNSQFGGTMFQDVEVLRSLPVILKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFT 472
Query: 496 ETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAM 317
T SPAPAT V TRLK PLMVN PP FTHGTLL TGT+PARY A+ RK G
Sbjct: 471 LTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKIGMER 292
Query: 316 SKCGRGGLHQPPSSLGRP*LGGQKLVAVT 230
SK GRGGLHQPP SLGR *LGGQKLVAVT
Sbjct: 291 SKWGRGGLHQPPLSLGRA*LGGQKLVAVT 205
Score = 105 bits (223), Expect(2) = 2e-095
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTAT 242
T GGACGYGNLYS GYG +AALSTALFN G +CG+C+E++C ND WC PG ++ T
Sbjct: 35 TMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPGNPSILVT 211
Score = 24.4 bits (47), Expect(2) = 6e-051
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2 / -2
Query: 223 VPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
+PG Q P +P LN AVL+AA
Sbjct: 192 LPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAA 94
>gb|DR055148.1|DR055148 RTCA1_21_G09.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_21_G09_A029 5', mRNA sequence
Length = 722
Score = 265 bits (573), Expect(2) = 2e-095
Identities = 100/141 (70%), Positives = 121/141 (85%)
Frame = +3 / +3
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
+I VTATNFCPPNY LP+D+GGWCNPPRPHFD++ P FL++A+YRAGIVPV FRRVPCVK
Sbjct: 294 SILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVK 473
Query: 402 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQ 581
+GG+RFTING YFNLVL+TNVAGAGD+ VS++GS+TGW P+SRNWGQNWQ ++ L Q
Sbjct: 474 QGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQCSTVLVGQ 653
Query: 582 ALSFQVTASDGRTVTSNGAVP 644
+LSF++T SD RT TS VP
Sbjct: 654 SLSFRITGSDRRTSTSWNIVP 716
Score = 179 bits (385), Expect(2) = 2e-045
Identities = 85/132 (64%), Positives = 88/132 (66%)
Frame = -2 / -2
Query: 625 VTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTR 446
V V SL V E C +R L CQFWPQF D G HPV P T SPAPAT V TR
Sbjct: 697 VEVLRSLPVILKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFTLTLTKSPAPATFVMRTR 518
Query: 445 LK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGR 266
LK PLMVN PP FTHGTLL TGT+PARY A+ RK G SK GRGGLHQPP SLGR
Sbjct: 517 LKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKIGMERSKWGRGGLHQPPLSLGR 338
Query: 265 P*LGGQKLVAVT 230
*LGGQKLVAVT
Sbjct: 337 A*LGGQKLVAVT 302
Score = 105 bits (223), Expect(2) = 2e-095
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTAT 242
T GGACGYGNLYS GYG +AALSTALFN G +CG+C+E++C ND WC PG ++ T
Sbjct: 132 TMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPGNPSILVT 308
Score = 24.4 bits (47), Expect(2) = 2e-045
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2 / -2
Query: 223 VPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
+PG Q P +P LN AVL+AA
Sbjct: 289 LPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAA 191
>gb|CF477384.1|CF477384 RTWW3_7_A01.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_7_A01_A022 5', mRNA sequence
Length = 715
Score = 275 bits (594), Expect(2) = 2e-095
Identities = 100/132 (75%), Positives = 117/132 (88%)
Frame = +3 / +2
Query: 195 NDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
+D +WCLPGT+TVTATN CPPN LP+D+GGWCNPP HFDMA+PAF +IA YR+GIVP+
Sbjct: 320 SDSQWCLPGTVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQKIAIYRSGIVPI 499
Query: 375 AFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
FRR+PCV++GG+RFTINGHSYFNLVL+TNV GAGDV +VSI+GS TGWQ MSRNWGQNW
Sbjct: 500 MFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNWGQNW 679
Query: 555 QSNSYLDRQALS 590
QSNSYL+ Q LS
Sbjct: 680 QSNSYLNGQTLS 715
Score = 198 bits (427), Expect = 5e-050
Identities = 87/125 (69%), Positives = 93/125 (74%)
Frame = -2 / -2
Query: 589 ESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTRLK*ECPLMVNRM 410
E C + ELLCQF PQ RD+ C PV EP MET TSPAP TLV ST+LK*ECPL+VNR
Sbjct: 714 ERVCPFK*ELLCQFCPQLRDIVCQPVLEPLMETASTSPAPPTLVMSTKLK*ECPLIVNRT 535
Query: 409 PPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVT 230
PP THG LLN GTMP Y A+ KAG AMSKC RGGLHQPP SLGR LGGQ+LVAVT
Sbjct: 534 PPSLTHGILLNMIGTMPLLYMAIF*KAGCAMSKCWRGGLHQPPLSLGRAELGGQRLVAVT 355
Query: 229 VMVPG 215
V VPG
Sbjct: 354 VTVPG 340
Score = 95.5 bits (202), Expect(2) = 2e-095
Identities = 34/44 (77%), Positives = 41/44 (93%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
T GGACGYGNLYS GYGT+TAALSTALFN+GA CG+CYE++C++
Sbjct: 185 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKCND 316
>gb|DR683982.1|DR683982 EST1074058 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAN59 3' end, mRNA sequence
Length = 876
Score = 341 bits (740), Expect(2) = 4e-095
Identities = 126/178 (70%), Positives = 156/178 (87%)
Frame = +3 / +2
Query: 114 GTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATNFCPPNYGLPSDDGGWC 293
GT TAALSTALFN+G +CG+CYE++C +D WCLPG++TVTATNFCPPN LP+++GGWC
Sbjct: 2 GTDTAALSTALFNNGLSCGACYEMKCIDDPEWCLPGSVTVTATNFCPPNNALPNNNGGWC 181
Query: 294 NPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAG 473
NPP HFDMAEPAF +IA+Y++GIVP+ +RRVPC++KGGIRFTING YFNLVL++NV G
Sbjct: 182 NPPLRHFDMAEPAFEKIAKYKSGIVPILYRRVPCLRKGGIRFTINGLPYFNLVLISNVGG 361
Query: 474 AGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
AGDV++VSI+GS T WQPMSRNWGQNWQSNS+L+ Q+LSF+VT SDGRT+ S A P+
Sbjct: 362 AGDVQAVSIKGSNTSWQPMSRNWGQNWQSNSFLNGQSLSFKVTTSDGRTIVSYNAAPS 535
Score = 226 bits (488), Expect = 2e-058
Identities = 109/205 (53%), Positives = 122/205 (59%)
Frame = -2 / -1
Query: 739 P*LIIQXXXXXXXAVHPQNWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYEL 560
P L+I + P +W P VWPNCQ G A VRPSL VT + C + EL
Sbjct: 627 PKLLIDGYTHSFASGFP*SWLPWNVWPNCQLEGAALYETIVRPSLVVTLKDRLCPFKKEL 448
Query: 559 LCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLL 380
LCQF PQ RD+GC V +P +ET TSPAP TL STRLK PLMV R+PPF GTLL
Sbjct: 447 LCQFCPQLRDIGCQLVFDPFIETAWTSPAPPTLEMSTRLKYGRPLMVKRIPPFLKQGTLL 268
Query: 379 NATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXX 200
GT+P Y A+ KAGSAMSKC RGGLH PP LGR LGGQKLVAVTV +PG
Sbjct: 267 *RMGTIPLLYLAIFSKAGSAMSKCRRGGLHHPPLLLGRALLGGQKLVAVTVTLPGKHHSG 88
Query: 199 XXXXXXX*QDPHAAPSLNSAVLSAA 125
* P +P LN AVL AA
Sbjct: 87 SSIHFIS*HAPQLSPLLNKAVLRAA 13
Score = 27.6 bits (54), Expect(2) = 4e-095
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 650 LAVRPDLRGRPVLR 691
LAVRPD+ G+P LR
Sbjct: 538 LAVRPDIPGKPTLR 579
>gb|DT631935.1|DT631935 EST1146866 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFE52 3' end, mRNA sequence
Length = 858
Score = 341 bits (740), Expect(2) = 4e-095
Identities = 126/178 (70%), Positives = 156/178 (87%)
Frame = +3 / +1
Query: 114 GTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATNFCPPNYGLPSDDGGWC 293
GT TAALSTALFN+G +CG+CYE++C +D WCLPG++TVTATNFCPPN LP+++GGWC
Sbjct: 10 GTDTAALSTALFNNGLSCGACYEMKCIDDPEWCLPGSVTVTATNFCPPNNALPNNNGGWC 189
Query: 294 NPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAG 473
NPP HFDMAEPAF +IA+Y++GIVP+ +RRVPC++KGGIRFTING YFNLVL++NV G
Sbjct: 190 NPPLRHFDMAEPAFEKIAKYKSGIVPILYRRVPCLRKGGIRFTINGLPYFNLVLISNVGG 369
Query: 474 AGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
AGDV++VSI+GS T WQPMSRNWGQNWQSNS+L+ Q+LSF+VT SDGRT+ S A P+
Sbjct: 370 AGDVQAVSIKGSNTSWQPMSRNWGQNWQSNSFLNGQSLSFKVTTSDGRTIVSYNAAPS 543
Score = 226 bits (488), Expect = 2e-058
Identities = 109/205 (53%), Positives = 122/205 (59%)
Frame = -2 / -2
Query: 739 P*LIIQXXXXXXXAVHPQNWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYEL 560
P L+I + P +W P VWPNCQ G A VRPSL VT + C + EL
Sbjct: 635 PKLLIDGYTHSFASGFP*SWLPWNVWPNCQLEGAALYETIVRPSLVVTLKDRLCPFKKEL 456
Query: 559 LCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLL 380
LCQF PQ RD+GC V +P +ET TSPAP TL STRLK PLMV R+PPF GTLL
Sbjct: 455 LCQFCPQLRDIGCQLVFDPFIETAWTSPAPPTLEMSTRLKYGRPLMVKRIPPFLKQGTLL 276
Query: 379 NATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXX 200
GT+P Y A+ KAGSAMSKC RGGLH PP LGR LGGQKLVAVTV +PG
Sbjct: 275 *RMGTIPLLYLAIFSKAGSAMSKCRRGGLHHPPLLLGRALLGGQKLVAVTVTLPGKHHSG 96
Query: 199 XXXXXXX*QDPHAAPSLNSAVLSAA 125
* P +P LN AVL AA
Sbjct: 95 SSIHFIS*HAPQLSPLLNKAVLRAA 21
Score = 27.6 bits (54), Expect(2) = 4e-095
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 650 LAVRPDLRGRPVLR 691
LAVRPD+ G+P LR
Sbjct: 546 LAVRPDIPGKPTLR 587
>gb|DT636492.1|DT636492 EST1151423 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGS45 3' end, mRNA sequence
Length = 833
Score = 264 bits (570), Expect(2) = 5e-095
Identities = 101/141 (71%), Positives = 120/141 (85%)
Frame = +3 / +3
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
+I VTATNFCPPNY LP+D+GGWCNPPRPHFD++ P FL++A+YRAGIVPV FRRVPCVK
Sbjct: 207 SILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVK 386
Query: 402 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQ 581
+GG+RFTING YFNLVL+TNVAGAGD+ VS +GS+TGW P+SRNWGQNWQ ++ L Q
Sbjct: 387 QGGVRFTINGFKYFNLVLITNVAGAGDLVRVSAKGSQTGWIPLSRNWGQNWQCSTVLVGQ 566
Query: 582 ALSFQVTASDGRTVTSNGAVP 644
+LSF+VT SD RT TS VP
Sbjct: 567 SLSFRVTGSDRRTSTSWNIVP 629
Score = 200 bits (431), Expect(2) = 9e-052
Identities = 95/149 (63%), Positives = 98/149 (65%)
Frame = -2 / -2
Query: 676 PSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRM 497
P KVWPN Q GT V V SL VT E C +R L CQFWPQF D G HPV P
Sbjct: 661 PEKVWPNSQFGGTMFQDVEVLRSLPVTLKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFA 482
Query: 496 ETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAM 317
T SPAPAT V TRLK PLMVN PP FTHGTLL TGT+PARY A+ RK G
Sbjct: 481 LTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKIGMER 302
Query: 316 SKCGRGGLHQPPSSLGRP*LGGQKLVAVT 230
SK GRGGLHQPP SLGR *LGGQKLVAVT
Sbjct: 301 SKWGRGGLHQPPLSLGRA*LGGQKLVAVT 215
Score = 105 bits (223), Expect(2) = 5e-095
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTAT 242
T GGACGYGNLYS GYG +AALSTALFN G +CG+C+E++C ND WC PG ++ T
Sbjct: 45 TMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPGNPSILVT 221
Score = 24.4 bits (47), Expect(2) = 9e-052
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2 / -2
Query: 223 VPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
+PG Q P +P LN AVL+AA
Sbjct: 202 LPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAA 104
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 338,128,078
Number of Sequences: 355925
Number of extensions: 4075839
Number of successful extensions: 35157
Number of sequences better than 1.0e-020: 297
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 15372213640
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)