TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3671909.2.1
(767 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF402148.1|CF402148 RTWW1_20_B09.g1_A015 Well-watered lo... 90 6e-030
gb|DR078693.1|DR078693 RTFEPL1_6_F09.b1_A029 Roots plus add... 86 3e-028
gb|DR180240.1|DR180240 RTMNUT1_27_G10.b1_A029 Roots minus m... 85 9e-027
gb|DR386257.1|DR386257 RTHG1_14_A02.b1_A029 Roots plus adde... 85 9e-027
gb|DR387368.1|DR387368 RTHG1_21_F12.b1_A029 Roots plus adde... 85 9e-027
gb|DR014989.1|DR014989 HEAT1_52_G06.g1_A029 Root at 37 C fo... 83 4e-026
gb|CF387653.1|CF387653 RTDR1_19_D01.b1_A015 Loblolly pine r... 86 8e-026
gb|CO409263.1|CO409263 EST839648 Sequencing ESTs from loblo... 84 1e-025
gb|DT625597.1|DT625597 EST1157521 Sequencing ESTs from lobl... 84 1e-025
gb|CF673059.1|CF673059 RTCNT1_75_F06.g1_A029 Root control P... 84 1e-025
gb|CF672984.1|CF672984 RTCNT1_75_F06.b1_A029 Root control P... 84 1e-025
gb|BX784158.1|BX784158 BX784158 Pinus pinaster differenciat... 87 2e-025
gb|DR010989.1|DR010989 HEAT1_2_D01.g1_A029 Root at 37 C for... 86 2e-025
gb|DR092404.1|DR092404 STRR1_1_E06.b1_A033 Stem Response Re... 93 3e-025
gb|DT625952.1|DT625952 EST1157876 Sequencing ESTs from lobl... 93 3e-025
gb|CV135378.1|CV135378 EST846587 Sequencing ESTs from loblo... 93 3e-025
gb|DR092490.1|DR092490 STRR1_1_E06.g1_A033 Stem Response Re... 93 3e-025
gb|CX650419.1|CX650419 COLD1_45_C03.g1_A029 Root cold Pinus... 93 3e-025
gb|CV033413.1|CV033413 RTNACL1_34_H08.b1_A029 Roots plus ad... 93 3e-025
gb|DR050330.1|DR050330 RTBOR1_22_F04.g1_A029 Roots plus add... 93 3e-025
gb|DR744591.1|DR744591 RTCU1_23_B10.g1_A029 Roots plus adde... 93 3e-025
gb|CF390685.1|CF390685 RTDR2_20_D05.g1_A021 Loblolly pine r... 93 3e-025
gb|CX650345.1|CX650345 COLD1_45_C03.b1_A029 Root cold Pinus... 93 3e-025
gb|DR025238.1|DR025238 STRS1_70_A08.g1_A034 Shoot tip pitch... 93 3e-025
gb|CF394958.1|CF394958 RTDS2_8_H11.g1_A021 Drought-stressed... 93 3e-025
gb|DR384838.1|DR384838 RTHG1_4_H10.g1_A029 Roots plus added... 93 3e-025
gb|CV036239.1|CV036239 RTNACL1_57_E12.g1_A029 Roots plus ad... 93 3e-025
gb|CV033500.1|CV033500 RTNACL1_34_H08.g1_A029 Roots plus ad... 93 3e-025
gb|DR167219.1|DR167219 RTPHOS1_17_A07.g1_A029 Roots minus p... 93 4e-025
gb|DR160246.1|DR160246 RTFE1_4_H05.g1_A029 Roots minus iron... 93 5e-025
gb|CF388973.1|CF388973 RTDR2_16_D05.g1_A021 Loblolly pine r... 92 5e-025
gb|CO369661.1|CO369661 RTK1_48_D04.g1_A029 Roots minus pota... 79 1e-024
gb|CF671978.1|CF671978 RTCNT1_60_B07.g1_A029 Root control P... 91 2e-024
gb|CF386135.1|CF386135 RTDR1_8_E10.g1_A015 Loblolly pine ro... 90 3e-024
gb|DN460749.1|DN460749 EST956548 Sequencing ESTs from loblo... 93 5e-024
gb|DT626855.1|DT626855 EST1159931 Sequencing ESTs from lobl... 93 5e-024
gb|DR055722.1|DR055722 RTCA1_25_B07.g1_A029 Roots minus cal... 89 5e-024
gb|DR071095.1|DR071095 RTDK1_17_C10.g1_A029 Roots, dark Pin... 75 5e-024
gb|CF475538.1|CF475538 RTWW2_12_G10.g1_A021 Well-watered lo... 89 8e-024
gb|DR057043.1|DR057043 RTNIT1_2_E01.b1_A029 Roots minus nit... 93 2e-023
gb|DR093528.1|DR093528 STRR1_8_G01.g1_A033 Stem Response Re... 79 8e-023
gb|DR093538.1|DR093538 STRR1_8_H01.g1_A033 Stem Response Re... 79 8e-023
gb|DR092715.1|DR092715 STRR1_3_G12.b1_A033 Stem Response Re... 79 8e-023
gb|CF391927.1|CF391927 RTDR3_10_D12.g1_A022 Loblolly pine r... 88 8e-023
gb|DR081343.1|DR081343 RTFEPL1_29_B02.b1_A029 Roots plus ad... 88 8e-023
gb|CF672051.1|CF672051 RTCNT1_61_B08.b1_A029 Root control P... 79 8e-023
gb|CF667935.1|CF667935 RTCNT1_33_A02.g1_A029 Root control P... 79 8e-023
gb|CF387703.1|CF387703 RTDR1_19_C11.g1_A015 Loblolly pine r... 90 8e-023
gb|DR025160.1|DR025160 STRS1_70_A08.b1_A034 Shoot tip pitch... 93 1e-022
gb|DR013036.1|DR013036 HEAT1_16_C09.g1_A029 Root at 37 C fo... 93 1e-022
gb|DR384758.1|DR384758 RTHG1_4_H10.b1_A029 Roots plus added... 93 1e-022
gb|DR069098.1|DR069098 RTDK1_4_H07.g1_A029 Roots, dark Pinu... 61 2e-022
gb|CO200190.1|CO200190 GEO2_6_A07.b1_A032 Root gravitropism... 80 2e-022
gb|DR018310.1|DR018310 STRS1_22_B04.b1_A034 Shoot tip pitch... 84 2e-022
gb|CX651079.1|CX651079 COLD1_50_B01.b1_A029 Root cold Pinus... 77 4e-022
gb|CF394868.1|CF394868 RTDS2_8_H11.b1_A021 Drought-stressed... 93 4e-022
gb|DR052669.1|DR052669 RTCA1_6_C09.b1_A029 Roots minus calc... 61 5e-022
gb|DR057509.1|DR057509 RTNIT1_6_E12.b1_A029 Roots minus nit... 61 5e-022
gb|CV036212.1|CV036212 RTNACL1_57_B07.g1_A029 Roots plus ad... 61 5e-022
gb|DR057693.1|DR057693 RTNIT1_7_F09.b1_A029 Roots minus nit... 77 5e-022
gb|CO364701.1|CO364701 RTK1_21_F12.b1_A029 Roots minus pota... 80 5e-022
gb|DR071932.1|DR071932 RTDK1_23_B01.b1_A029 Roots, dark Pin... 77 5e-022
gb|CX652892.1|CX652892 COLD1_62_D09.b1_A029 Root cold Pinus... 80 5e-022
gb|DR060345.1|DR060345 RTNIT1_27_F06.b1_A029 Roots minus ni... 77 5e-022
gb|CF671705.1|CF671705 RTCNT1_58_F05.g1_A029 Root control P... 77 5e-022
gb|DR011089.1|DR011089 HEAT1_3_H03.b1_A029 Root at 37 C for... 75 7e-022
gb|CO201161.1|CO201161 RTCNT2_4_B05.b1_A029 Root control 2 ... 75 7e-022
gb|CF667376.1|CF667376 RTCNT1_29_G09.g1_A029 Root control P... 80 7e-022
gb|DR023807.1|DR023807 STRS1_60_E04.b1_A034 Shoot tip pitch... 80 7e-022
gb|DR387487.1|DR387487 RTHG1_22_D03.b1_A029 Roots plus adde... 80 7e-022
gb|CO197738.1|CO197738 GEO1_8_E11.g1_A029 Root gravitropism... 80 7e-022
gb|AW056850.1|AW056850 ST57B04 Pine TriplEx shoot tip libra... 93 7e-022
gb|CX646473.1|CX646473 COLD1_9_C08.g1_A029 Root cold Pinus ... 61 9e-022
gb|DR016471.1|DR016471 STRS1_10_G08.b1_A034 Shoot tip pitch... 61 9e-022
gb|DR092671.1|DR092671 STRR1_2_H11.g1_A033 Stem Response Re... 61 9e-022
gb|CX646392.1|CX646392 COLD1_9_C08.b1_A029 Root cold Pinus ... 61 9e-022
gb|DR093616.1|DR093616 STRR1_9_H04.b1_A033 Stem Response Re... 61 9e-022
gb|CF399002.1|CF399002 RTDS3_11_C10.g1_A022 Drought-stresse... 61 9e-022
gb|CF393834.1|CF393834 RTDS2_1_H04.g1_A021 Drought-stressed... 61 9e-022
gb|CF397580.1|CF397580 RTDS3_4_F07.g1_A022 Drought-stressed... 61 9e-022
gb|CO166593.1|CO166593 FLD1_63_D10.b1_A029 Root flooded Pin... 61 9e-022
gb|CF398146.1|CF398146 RTDS3_21_H09.b1_A022 Drought-stresse... 61 9e-022
gb|CF391719.1|CF391719 RTDR3_11_B03.g1_A022 Loblolly pine r... 61 9e-022
gb|DR165061.1|DR165061 RTPHOS1_2_F12.b1_A029 Roots minus ph... 61 9e-022
gb|DR119927.1|DR119927 RTMG1_26_A07.g2_A029 Roots minus mag... 61 9e-022
gb|DR093440.1|DR093440 STRR1_8_G01.b1_A033 Stem Response Re... 79 9e-022
gb|DR061097.1|DR061097 RTNIT1_32_C01.b1_A029 Roots minus ni... 92 9e-022
gb|CF391187.1|CF391187 RTDR3_4_G12.b1_A022 Loblolly pine ro... 88 9e-022
gb|CF671186.1|CF671186 RTCNT1_55_G12.b1_A029 Root control P... 77 9e-022
gb|CO159277.1|CO159277 FLD1_12_C12.g1_A029 Root flooded Pin... 61 2e-021
gb|CO159199.1|CO159199 FLD1_12_C12.b1_A029 Root flooded Pin... 61 2e-021
gb|CO161713.1|CO161713 FLD1_30_E03.g1_A029 Root flooded Pin... 61 2e-021
gb|DR110684.1|DR110684 RTS1_12_G08.b1_A029 Roots minus sulf... 61 2e-021
gb|CO164418.1|CO164418 FLD1_47_H06.g1_A029 Root flooded Pin... 61 2e-021
gb|CX653133.1|CX653133 COLD1_63_C12.g1_A029 Root cold Pinus... 61 2e-021
gb|DR057567.1|DR057567 RTNIT1_6_C04.g1_A029 Roots minus nit... 61 2e-021
gb|DR059586.1|DR059586 RTNIT1_18_C07.g1_A029 Roots minus ni... 61 2e-021
gb|CO161636.1|CO161636 FLD1_30_E03.b1_A029 Root flooded Pin... 61 2e-021
gb|DR060983.1|DR060983 RTNIT1_31_G07.b1_A029 Roots minus ni... 61 2e-021
gb|DR120351.1|DR120351 RTMG1_29_D04.b1_A029 Roots minus mag... 61 2e-021
gb|DR110769.1|DR110769 RTS1_12_G08.g1_A029 Roots minus sulf... 61 2e-021
gb|DR057417.1|DR057417 RTNIT1_5_E06.g1_A029 Roots minus nit... 61 2e-021
gb|DR060823.1|DR060823 RTNIT1_30_E12.b1_A029 Roots minus ni... 61 2e-021
gb|DR052219.1|DR052219 RTCA1_3_E03.b1_A029 Roots minus calc... 61 2e-021
gb|DR071183.1|DR071183 RTDK1_18_E02.b1_A029 Roots, dark Pin... 61 2e-021
gb|DR117117.1|DR117117 RTMG1_4_G11.g1_A029 Roots minus magn... 61 2e-021
gb|DR743912.1|DR743912 RTCU1_19_A01.b1_A029 Roots plus adde... 61 2e-021
gb|DR745864.1|DR745864 RTCU1_33_C12.b1_A029 Roots plus adde... 61 2e-021
gb|DR180193.1|DR180193 RTMNUT1_27_C02.b1_A029 Roots minus m... 61 2e-021
gb|CO368486.1|CO368486 RTK1_40_H09.g1_A029 Roots minus pota... 61 2e-021
gb|DR059501.1|DR059501 RTNIT1_18_C07.b1_A029 Roots minus ni... 61 2e-021
gb|DR059995.1|DR059995 RTNIT1_25_B10.b1_A029 Roots minus ni... 61 2e-021
gb|CX646926.1|CX646926 COLD1_12_H09.b1_A029 Root cold Pinus... 61 2e-021
gb|DR057333.1|DR057333 RTNIT1_5_E06.b1_A029 Roots minus nit... 61 2e-021
gb|DR743629.1|DR743629 RTCU1_17_D08.b1_A029 Roots plus adde... 61 2e-021
gb|CF668475.1|CF668475 RTCNT1_36_E12.g1_A029 Root control P... 61 2e-021
gb|CO368397.1|CO368397 RTK1_40_H09.b1_A029 Roots minus pota... 61 2e-021
gb|CX651081.1|CX651081 COLD1_50_B03.b1_A029 Root cold Pinus... 61 2e-021
gb|DR052866.1|DR052866 RTCA1_7_A01.g1_A029 Roots minus calc... 61 2e-021
gb|DR116812.1|DR116812 RTMG1_3_A02.b1_A029 Roots minus magn... 61 2e-021
gb|DR117665.1|DR117665 RTMG1_8_H08.b1_A029 Roots minus magn... 61 2e-021
gb|CO363875.1|CO363875 RTK1_12_H01.b1_A029 Roots minus pota... 61 2e-021
gb|DR011050.1|DR011050 HEAT1_3_B11.b1_A029 Root at 37 C for... 61 2e-021
gb|CX713831.1|CX713831 RTPQ1_13_E11.g1_A032 Roots treated w... 61 2e-021
gb|CO363969.1|CO363969 RTK1_12_H01.g1_A029 Roots minus pota... 61 2e-021
gb|DR013805.1|DR013805 HEAT1_21_D08.g1_A029 Root at 37 C fo... 61 2e-021
gb|DR061063.1|DR061063 RTNIT1_31_G07.g1_A029 Roots minus ni... 61 2e-021
gb|DR089673.1|DR089673 RTAL1_10_D06.b1_A029 Roots plus adde... 61 2e-021
gb|DR160103.1|DR160103 RTFE1_3_F04.g1_A029 Roots minus iron... 61 2e-021
gb|DR743916.1|DR743916 RTCU1_19_A11.b1_A029 Roots plus adde... 61 2e-021
gb|DR743927.1|DR743927 RTCU1_19_C08.b1_A029 Roots plus adde... 61 2e-021
gb|DR112606.1|DR112606 RTS1_29_G06.b1_A029 Roots minus sulf... 61 2e-021
gb|CV034484.1|CV034484 RTNACL1_9_F08.b1_A029 Roots plus add... 61 2e-021
gb|DR088863.1|DR088863 RTAL1_5_D03.b1_A029 Roots plus added... 61 2e-021
gb|DR745939.1|DR745939 RTCU1_33_C12.g1_A029 Roots plus adde... 61 2e-021
gb|DR058300.1|DR058300 RTNIT1_11_B01.b1_A029 Roots minus ni... 61 2e-021
gb|CO201065.1|CO201065 RTCNT2_3_H11.b1_A029 Root control 2 ... 61 2e-021
gb|DR119569.1|DR119569 RTMG1_24_C04.b1_A029 Roots minus mag... 61 2e-021
gb|CF396181.1|CF396181 RTDS2_15_F07.g1_A021 Drought-stresse... 61 2e-021
gb|CO164338.1|CO164338 FLD1_47_H06.b1_A029 Root flooded Pin... 61 2e-021
gb|CO366481.1|CO366481 RTK1_28_C12.b1_A029 Roots minus pota... 61 2e-021
gb|DR179288.1|DR179288 RTMNUT1_21_D12.b2_A029 Roots minus m... 61 2e-021
gb|CF398971.1|CF398971 RTDS3_11_B07.g1_A022 Drought-stresse... 61 2e-021
gb|CO362463.1|CO362463 RTK1_3_E02.g1_A029 Roots minus potas... 61 2e-021
gb|CF398929.1|CF398929 RTDS3_11_B07.b1_A022 Drought-stresse... 61 2e-021
gb|CF475340.1|CF475340 RTWW2_13_D10.g1_A021 Well-watered lo... 61 2e-021
gb|DR118325.1|DR118325 RTMG1_12_C07.g1_A029 Roots minus mag... 61 2e-021
gb|CO369392.1|CO369392 RTK1_46_G07.g1_A029 Roots minus pota... 61 2e-021
gb|CO200884.1|CO200884 RTCNT2_2_E09.b1_A029 Root control 2 ... 61 2e-021
gb|DR072217.1|DR072217 RTDK1_24_G08.g1_A029 Roots, dark Pin... 61 2e-021
gb|DR088659.1|DR088659 RTAL1_3_B12.g1_A029 Roots plus added... 61 2e-021
gb|BX682194.1|BX682194 BX682194 RS Pinus pinaster cDNA clon... 61 2e-021
gb|CV033215.1|CV033215 RTNACL1_33_C10.b1_A029 Roots plus ad... 71 2e-021
gb|DR055649.1|DR055649 RTCA1_25_B07.b1_A029 Roots minus cal... 89 2e-021
gb|DR071240.1|DR071240 RTDK1_18_C09.g1_A029 Roots, dark Pin... 66 2e-021
gb|CF391177.1|CF391177 RTDR3_4_C11.b1_A022 Loblolly pine ro... 61 3e-021
gb|CF391179.1|CF391179 RTDR3_4_H10.b1_A022 Loblolly pine ro... 61 3e-021
gb|DR012987.1|DR012987 HEAT1_16_G02.b1_A029 Root at 37 C fo... 73 3e-021
gb|DR120255.1|DR120255 RTMG1_28_B11.g2_A029 Roots minus mag... 61 4e-021
gb|BX680572.1|BX680572 BX680572 RS Pinus pinaster cDNA clon... 61 4e-021
gb|BX681001.1|BX681001 BX681001 RS Pinus pinaster cDNA clon... 61 4e-021
gb|DN448211.1|DN448211 EST944010 Sequencing ESTs from loblo... 84 6e-021
gb|CO174545.1|CO174545 NDL1_44_D12.g1_A029 Needles control ... 91 6e-021
gb|CV033999.1|CV033999 RTNACL1_37_H12.g1_A029 Roots plus ad... 61 8e-021
gb|CF398724.1|CF398724 RTDS3_16_A04.b1_A022 Drought-stresse... 61 8e-021
gb|CF398406.1|CF398406 RTDS3_12_F11.b1_A022 Drought-stresse... 61 8e-021
>gb|CF402148.1|CF402148 RTWW1_20_B09.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_20_B09_A015 5', mRNA sequence
Length = 795
Score = 89.5 bits (189), Expect(2) = 6e-030
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = -1 / +3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S ++ KG D+ELLPFG+GRRMCPG + GL V +AL++L+ F W+ P +P E DM E
Sbjct: 285 STLDVKGRDYELLPFGSGRRMCPGYSHGLKVVYMALSNLIHGFQWKLPDGQNPEELDMCE 464
Query: 410 AFGITARR 387
FG++ R
Sbjct: 465 TFGLSTPR 488
Score = 61.6 bits (128), Expect(2) = 6e-030
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = -1 / +3
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+P S +P R+ GYD+PA T + VNVW +GRDG+ W
Sbjct: 132 MLVPHLSTQPCRIAGYDIPANTRLFVNVWTIGRDGKLW 245
>gb|DR078693.1|DR078693 RTFEPL1_6_F09.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_6_F09_A029 3', mRNA sequence
Length = 724
Score = 86.3 bits (182), Expect(2) = 3e-028
Identities = 33/65 (50%), Positives = 44/65 (67%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S V+ KG D+ELLPFG+GRRMCPG + G+ V L LA+L+ F W P +P + DM E
Sbjct: 275 STVDVKGRDYELLPFGSGRRMCPGYSLGIKVVHLGLANLIHGFHWCQPDGQNPEDLDMGE 454
Query: 410 AFGIT 396
FG++
Sbjct: 455 TFGLS 469
Score = 59.3 bits (123), Expect(2) = 3e-028
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = -1 / +2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR S + R+ GYD+PA T + VNVW +GRDG W
Sbjct: 122 MLVPRLSTQDCRIAGYDIPANTRLFVNVWTIGRDGNLW 235
>gb|DR180240.1|DR180240 RTMNUT1_27_G10.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_27_G10_A029 3', mRNA sequence
Length = 819
Score = 84.9 bits (179), Expect(2) = 9e-027
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = -1 / +1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S ++ KG D+ELLPFG GRRMCPG + GL V L LA+L+ F W P P + DM E
Sbjct: 238 SPLDVKGRDYELLPFGTGRRMCPGYSLGLKVVHLGLANLIHGFHWWLPDGQSPKDLDMGE 417
Query: 410 AFGIT 396
FG++
Sbjct: 418 TFGLS 432
Score = 55.6 bits (115), Expect(2) = 9e-027
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1 / +1
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR S EP ++ GYD+PA T + VNVW + D +W
Sbjct: 85 MLVPRLSTEPCKIAGYDIPANTRLYVNVWTIAHDAGFW 198
>gb|DR386257.1|DR386257 RTHG1_14_A02.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_14_A02_A029 3', mRNA sequence
Length = 809
Score = 84.9 bits (179), Expect(2) = 9e-027
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S ++ KG D+ELLPFG GRRMCPG + GL V L LA+L+ F W P P + DM E
Sbjct: 212 SPLDVKGRDYELLPFGTGRRMCPGYSLGLKVVHLGLANLIHGFHWWLPDGQSPKDLDMGE 391
Query: 410 AFGIT 396
FG++
Sbjct: 392 TFGLS 406
Score = 55.6 bits (115), Expect(2) = 9e-027
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1 / +2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR S EP ++ GYD+PA T + VNVW + D +W
Sbjct: 59 MLVPRLSTEPCKIAGYDIPANTRLYVNVWTIAHDAGFW 172
>gb|DR387368.1|DR387368 RTHG1_21_F12.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_21_F12_A029 3', mRNA sequence
Length = 716
Score = 84.9 bits (179), Expect(2) = 9e-027
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S ++ KG D+ELLPFG GRRMCPG + GL V L LA+L+ F W P P + DM E
Sbjct: 323 SPLDVKGRDYELLPFGTGRRMCPGYSLGLKVVHLGLANLIHGFHWWLPDGQSPKDLDMGE 502
Query: 410 AFGIT 396
FG++
Sbjct: 503 TFGLS 517
Score = 55.6 bits (115), Expect(2) = 9e-027
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1 / +2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR S EP ++ GYD+PA T + VNVW + D +W
Sbjct: 170 MLVPRLSTEPCKIAGYDIPANTRLYVNVWTIAHDAGFW 283
>gb|DR014989.1|DR014989 HEAT1_52_G06.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_52_G06_A029 5', mRNA sequence
Length = 889
Score = 82.6 bits (174), Expect(2) = 4e-026
Identities = 33/68 (48%), Positives = 42/68 (61%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S V+ +G DF+L+PFG+GRR CPGM G+ VE LA LL FDW P + + DM E
Sbjct: 161 SCVDVRGQDFQLIPFGSGRRGCPGMQLGMVIVEFLLAQLLHCFDWRLPDGMEGRDLDMNE 340
Query: 410 AFGITARR 387
FG+ R
Sbjct: 341 IFGLAIPR 364
Score = 55.6 bits (115), Expect(2) = 4e-026
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = -1 / +2
Query: 737 QSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+S EP V GY++PAGT V+VN WA+GRD + W
Sbjct: 14 ESMEPCTVCGYEIPAGTRVIVNAWAIGRDPKSW 112
>gb|CF387653.1|CF387653 RTDR1_19_D01.b1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_19_D01_A015 3', mRNA
sequence
Length = 520
Score = 86.3 bits (182), Expect(2) = 8e-026
Identities = 33/65 (50%), Positives = 44/65 (67%)
Frame = -1 / +3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S V+ KG D+ELLPFG+GRRMCPG + G+ V L LA+L+ F W P +P + DM E
Sbjct: 135 STVDVKGRDYELLPFGSGRRMCPGYSLGIKVVHLGLANLIHGFHWCQPDGQNPEDLDMGE 314
Query: 410 AFGIT 396
FG++
Sbjct: 315 TFGLS 329
Score = 51.0 bits (105), Expect(2) = 8e-026
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -1 / +3
Query: 719 RVLGYDVPAGTTVLVNVWALGRDGRYW 639
R+ GYD+PA T + VNVW +GRDG W
Sbjct: 15 RIAGYDIPANTRLFVNVWTIGRDGNLW 95
>gb|CO409263.1|CO409263 EST839648 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAKN53 5' end, mRNA sequence
Length = 915
Score = 84.0 bits (177), Expect(2) = 1e-025
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SA++ KG D++LLPFG GRRMCPG GL V L LA+L+ F W P P + DM E
Sbjct: 476 SALDVKGRDYQLLPFGTGRRMCPGYNLGLKVVHLGLANLIHGFHWCLPDGQSPKDLDMGE 655
Query: 410 AFGIT 396
FG++
Sbjct: 656 TFGLS 670
Score = 52.4 bits (108), Expect(2) = 1e-025
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = -1 / +2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR S E +V GYD+PA T + VNVW + RD +W
Sbjct: 323 MLVPRLSTEACKVGGYDIPANTRLHVNVWTIARDSGFW 436
>gb|DT625597.1|DT625597 EST1157521 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA166 5' end, mRNA sequence
Length = 906
Score = 84.0 bits (177), Expect(2) = 1e-025
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SA++ KG D++LLPFG GRRMCPG GL V L LA+L+ F W P P + DM E
Sbjct: 476 SALDVKGRDYQLLPFGTGRRMCPGYNLGLKVVHLGLANLIHGFHWCLPDGQSPKDLDMGE 655
Query: 410 AFGIT 396
FG++
Sbjct: 656 TFGLS 670
Score = 52.4 bits (108), Expect(2) = 1e-025
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = -1 / +2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR S E +V GYD+PA T + VNVW + RD +W
Sbjct: 323 MLVPRLSTEACKVGGYDIPANTRLHVNVWTIARDSGFW 436
>gb|CF673059.1|CF673059 RTCNT1_75_F06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_75_F06_A029 5', mRNA sequence
Length = 722
Score = 84.0 bits (177), Expect(2) = 1e-025
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SA++ KG D++LLPFG GRRMCPG GL V L LA+L+ F W P P + DM E
Sbjct: 419 SALDVKGRDYQLLPFGTGRRMCPGYNLGLKVVHLGLANLIHGFHWCLPDGQSPKDLDMGE 598
Query: 410 AFGIT 396
FG++
Sbjct: 599 TFGLS 613
Score = 52.4 bits (108), Expect(2) = 1e-025
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = -1 / +2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR S E +V GYD+PA T + VNVW + RD +W
Sbjct: 266 MLVPRLSTEACKVGGYDIPANTRLHVNVWTIARDSGFW 379
>gb|CF672984.1|CF672984 RTCNT1_75_F06.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_75_F06_A029 3', mRNA sequence
Length = 682
Score = 84.0 bits (177), Expect(2) = 1e-025
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = -1 / +3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SA++ KG D++LLPFG GRRMCPG GL V L LA+L+ F W P P + DM E
Sbjct: 243 SALDVKGRDYQLLPFGTGRRMCPGYNLGLKVVHLGLANLIHGFHWCLPDGQSPKDLDMGE 422
Query: 410 AFGIT 396
FG++
Sbjct: 423 TFGLS 437
Score = 52.4 bits (108), Expect(2) = 1e-025
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = -1 / +3
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR S E +V GYD+PA T + VNVW + RD +W
Sbjct: 90 MLVPRLSTEACKVGGYDIPANTRLHVNVWTIARDSGFW 203
>gb|BX784158.1|BX784158 BX784158 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 130A02, mRNA sequence
Length = 679
Score = 87.2 bits (184), Expect(2) = 2e-025
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = -1 / +2
Query: 584 VEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEAF 405
+E+KG +FEL+PFGAGRR+CPG+ V L ASLL F+W P + P + DM E F
Sbjct: 272 IEYKGQNFELIPFGAGRRICPGLPLAHRMVHLVTASLLHSFNWSLPDGTTPGDMDMTEKF 451
Query: 404 GITARR 387
GIT ++
Sbjct: 452 GITLQK 469
Score = 48.7 bits (100), Expect(2) = 2e-025
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -1 / +2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
L++P +++ V GY +P T VLVN WA+GRD W
Sbjct: 113 LMIPHRAESSCEVAGYMIPKSTKVLVNAWAIGRDPTIW 226
>gb|DR010989.1|DR010989 HEAT1_2_D01.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_2_D01_A029 5', mRNA sequence
Length = 599
Score = 85.8 bits (181), Expect(2) = 2e-025
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = -1 / +3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SA++ KG D+ELLPFG GRRMCPG GL V L LA+L+ F W P +P + DM E
Sbjct: 360 SALDVKGRDYELLPFGTGRRMCPGYNLGLKVVHLGLANLIHGFHWCLPDGQNPEDLDMGE 539
Query: 410 AFGIT 396
FG++
Sbjct: 540 TFGLS 554
Score = 50.1 bits (103), Expect(2) = 2e-025
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1 / +3
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR S E +V GYD+PA T + VNVW + R+ +W
Sbjct: 207 MLVPRLSTEACKVGGYDIPANTRLHVNVWTIARNSDFW 320
>gb|DR092404.1|DR092404 STRR1_1_E06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_E06_A033 3', mRNA sequence
Length = 933
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 434 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 613
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 614 AYGLTLQK 637
Score = 42.3 bits (86), Expect(2) = 3e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +2
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 272 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 394
>gb|DT625952.1|DT625952 EST1157876 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA548 5' end, mRNA sequence
Length = 876
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 248 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 427
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 428 AYGLTLQK 451
Score = 42.3 bits (86), Expect(2) = 3e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +2
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 86 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 208
>gb|CV135378.1|CV135378 EST846587 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PICMB24 5' end, mRNA sequence
Length = 871
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 248 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 427
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 428 AYGLTLQK 451
Score = 42.3 bits (86), Expect(2) = 3e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +2
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 86 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 208
>gb|DR092490.1|DR092490 STRR1_1_E06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_E06_A033 5', mRNA sequence
Length = 860
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 541 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 720
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 721 AYGLTLQK 744
Score = 42.3 bits (86), Expect(2) = 3e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +1
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 379 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 501
>gb|CX650419.1|CX650419 COLD1_45_C03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_45_C03_A029 5', mRNA sequence
Length = 843
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / -1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 615 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 436
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 435 AYGLTLQK 412
Score = 42.3 bits (86), Expect(2) = 3e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / -1
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 777 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 655
>gb|CV033413.1|CV033413 RTNACL1_34_H08.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_34_H08_A029 3', mRNA sequence
Length = 798
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 293 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 472
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 473 AYGLTLQK 496
Score = 42.3 bits (86), Expect(2) = 3e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +2
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 131 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 253
>gb|DR050330.1|DR050330 RTBOR1_22_F04.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_22_F04_A029 5', mRNA sequence
Length = 796
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 542 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 721
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 722 AYGLTLQK 745
Score = 42.3 bits (86), Expect(2) = 3e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +2
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 380 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 502
>gb|DR744591.1|DR744591 RTCU1_23_B10.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_23_B10_A029 5', mRNA sequence
Length = 795
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / -3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 556 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 377
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 376 AYGLTLQK 353
Score = 42.3 bits (86), Expect(2) = 3e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / -3
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 718 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 596
>gb|CF390685.1|CF390685 RTDR2_20_D05.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_20_D05_A021 5', mRNA
sequence
Length = 740
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 490 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 669
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 670 AYGLTLQK 693
Score = 42.3 bits (86), Expect(2) = 3e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +1
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 328 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 450
>gb|CX650345.1|CX650345 COLD1_45_C03.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_45_C03_A029 3', mRNA sequence
Length = 741
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / -1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 459 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 280
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 279 AYGLTLQK 256
Score = 42.3 bits (86), Expect(2) = 3e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / -1
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 621 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 499
>gb|DR025238.1|DR025238 STRS1_70_A08.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_70_A08_A034 5', mRNA sequence
Length = 727
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 469 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 648
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 649 AYGLTLQK 672
Score = 42.3 bits (86), Expect(2) = 3e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +1
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 307 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 429
>gb|CF394958.1|CF394958 RTDS2_8_H11.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_8_H11_A021 5', mRNA sequence
Length = 726
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 475 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 654
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 655 AYGLTLQK 678
Score = 42.3 bits (86), Expect(2) = 3e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +1
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 313 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 435
>gb|DR384838.1|DR384838 RTHG1_4_H10.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_4_H10_A029 5', mRNA sequence
Length = 723
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 267 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 446
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 447 AYGLTLQK 470
Score = 42.3 bits (86), Expect(2) = 3e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +3
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 105 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 227
>gb|CV036239.1|CV036239 RTNACL1_57_E12.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_57_E12_A029 5', mRNA sequence
Length = 713
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 441 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 620
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 621 AYGLTLQK 644
Score = 42.3 bits (86), Expect(2) = 3e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +3
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 279 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 401
>gb|CV033500.1|CV033500 RTNACL1_34_H08.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_34_H08_A029 5', mRNA sequence
Length = 667
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 298 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 477
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 478 AYGLTLQK 501
Score = 42.3 bits (86), Expect(2) = 3e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +1
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 136 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 258
>gb|DR167219.1|DR167219 RTPHOS1_17_A07.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_17_A07_A029 5', mRNA sequence
Length = 745
Score = 93.2 bits (197), Expect(2) = 4e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / -2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 591 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 412
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 411 AYGLTLQK 388
Score = 41.8 bits (85), Expect(2) = 4e-025
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -1 / -2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LLLPR + E V GY +P +LVN W + RD W
Sbjct: 744 LLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 631
>gb|DR160246.1|DR160246 RTFE1_4_H05.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_4_H05_A029 5', mRNA sequence
Length = 768
Score = 93.2 bits (197), Expect(2) = 5e-025
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / -2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 461 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 282
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 281 AYGLTLQK 258
Score = 41.4 bits (84), Expect(2) = 5e-025
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1 / -2
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LL+PR + E V GY +P +LVN W + RD W
Sbjct: 623 STPLLMPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 501
>gb|CF388973.1|CF388973 RTDR2_16_D05.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_16_D05_A021 5', mRNA
sequence
Length = 662
Score = 92.3 bits (195), Expect(2) = 5e-025
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = -1 / +3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 462 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 641
Query: 410 AFGIT 396
A+G+T
Sbjct: 642 AYGLT 656
Score = 42.3 bits (86), Expect(2) = 5e-025
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +3
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 300 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 422
>gb|CO369661.1|CO369661 RTK1_48_D04.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_48_D04_A029 5', mRNA sequence
Length = 585
Score = 79.0 bits (166), Expect(2) = 1e-024
Identities = 34/70 (48%), Positives = 43/70 (61%)
Frame = -1 / -1
Query: 587 AVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEA 408
+++ K + + +PFGAGRR CPG G+ VE LA LL FDW PG + E DM+E
Sbjct: 417 SLDEKVRNCQWIPFGAGRRGCPGEQLGMLLVEFPLAQLLHCFDWTLPGKMNGQELDMSER 238
Query: 407 FGITARRKAD 378
FGIT RR D
Sbjct: 237 FGITVRRAHD 208
Score = 54.2 bits (112), Expect(2) = 1e-024
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -1 / -1
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
AS L LP S E VLGY++P T VLVN+WA+GR+ W
Sbjct: 585 ASPLALPHLSVEACNVLGYEIPRNTRVLVNLWAIGRNPTSW 463
>gb|CF671978.1|CF671978 RTCNT1_60_B07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_60_B07_A029 5', mRNA sequence
Length = 748
Score = 90.9 bits (192), Expect(2) = 2e-024
Identities = 35/70 (50%), Positives = 50/70 (71%)
Frame = -1 / +3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S+V+ +G+DF+++PFGAGRR+C GM+ G+ V+L LA+LL FD P P DMAE
Sbjct: 501 SSVDVRGSDFQIIPFGAGRRICAGMSMGIRMVQLMLATLLHSFDLSLPNGQPPEALDMAE 680
Query: 410 AFGITARRKA 381
+FG+T R+ A
Sbjct: 681 SFGLTLRKAA 710
Score = 41.4 bits (84), Expect(2) = 2e-024
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1 / +3
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LLLPR + E + GY VP ++VN W + RD W
Sbjct: 348 LLLPRMTVEACEIEGYYVPKNARLMVNAWGMQRDPGVW 461
>gb|CF386135.1|CF386135 RTDR1_8_E10.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_8_E10_A015 5', mRNA
sequence
Length = 649
Score = 89.5 bits (189), Expect(2) = 3e-024
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -1 / +1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL DW P P DMAE
Sbjct: 334 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSCDWSLPEGQLPENLDMAE 513
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 514 AYGLTLQK 537
Score = 42.3 bits (86), Expect(2) = 3e-024
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +1
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 172 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 294
>gb|DN460749.1|DN460749 EST956548 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPII213 5' end, mRNA sequence
Length = 720
Score = 93.2 bits (197), Expect(2) = 5e-024
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 148 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 327
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 328 AYGLTLQK 351
Score = 38.2 bits (77), Expect(2) = 5e-024
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1 / +1
Query: 746 LPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LPR + E V GY +P +LVN W + RD W
Sbjct: 1 LPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 108
>gb|DT626855.1|DT626855 EST1159931 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAS14 5' end, mRNA sequence
Length = 720
Score = 93.2 bits (197), Expect(2) = 5e-024
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 148 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 327
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 328 AYGLTLQK 351
Score = 38.2 bits (77), Expect(2) = 5e-024
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1 / +1
Query: 746 LPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LPR + E V GY +P +LVN W + RD W
Sbjct: 1 LPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 108
>gb|DR055722.1|DR055722 RTCA1_25_B07.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_25_B07_A029 5', mRNA sequence
Length = 691
Score = 89.0 bits (188), Expect(2) = 5e-024
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -1 / +3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PF AGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 381 SAVDVRGTDFEVIPFCAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 560
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 561 AYGLTLQK 584
Score = 42.3 bits (86), Expect(2) = 5e-024
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +3
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ LLLPR + E V GY +P +LVN W + RD W
Sbjct: 219 STPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 341
>gb|DR071095.1|DR071095 RTDK1_17_C10.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_17_C10_A029 5', mRNA sequence
Length = 517
Score = 75.3 bits (158), Expect(2) = 5e-024
Identities = 32/66 (48%), Positives = 41/66 (62%)
Frame = -1 / +1
Query: 587 AVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEA 408
+++ K + + +PFGAGRR CPG G+ VE LA LL FDW PG + E DM+E
Sbjct: 268 SLDEKVRNCQWIPFGAGRRGCPGEQLGMLLVEFPLAQLLHCFDWTLPGKMNGQELDMSER 447
Query: 407 FGITAR 390
FGIT R
Sbjct: 448 FGITVR 465
Score = 56.1 bits (116), Expect(2) = 5e-024
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = -1 / +1
Query: 764 AASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
AAS L LP S E VLGY++P T VLVN+WA+GR+ W
Sbjct: 97 AASPLALPHLSVEACNVLGYEIPRNTRVLVNLWAIGRNPTSW 222
>gb|CF475538.1|CF475538 RTWW2_12_G10.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_12_G10_A021 5', mRNA sequence
Length = 750
Score = 89.0 bits (188), Expect(2) = 8e-024
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = -1 / -3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S+V+ +G+DF+++PFG GRR+C GM+ G+ V+L LA+LL FD P P DMAE
Sbjct: 421 SSVDVRGSDFQIIPFGTGRRICAGMSMGIRMVQLMLATLLHSFDLSLPNGQPPEALDMAE 242
Query: 410 AFGITARRKA 381
+FG+T R+ A
Sbjct: 241 SFGLTLRKAA 212
Score = 41.4 bits (84), Expect(2) = 8e-024
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1 / -3
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LLLPR + E + GY VP ++VN W + RD W
Sbjct: 574 LLLPRMTVEACEIEGYYVPKNARLMVNAWGMQRDPGVW 461
>gb|DR057043.1|DR057043 RTNIT1_2_E01.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_2_E01_A029 3', mRNA sequence
Length = 641
Score = 93.2 bits (197), Expect(2) = 2e-023
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 146 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 325
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 326 AYGLTLQK 349
Score = 36.3 bits (73), Expect(2) = 2e-023
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1 / +2
Query: 743 PRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
PR + E V GY +P +LVN W + RD W
Sbjct: 2 PRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 106
>gb|DR093528.1|DR093528 STRR1_8_G01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_8_G01_A033 5', mRNA sequence
Length = 902
Score = 79.4 bits (167), Expect(2) = 8e-023
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = -1 / +3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S +E++G +FEL+PFGAGRR+CPG+ V + ASLL F+W P DM+E
Sbjct: 429 SEMEYRGQNFELIPFGAGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDMSE 608
Query: 410 AFGITARR 387
FGIT +R
Sbjct: 609 RFGITLQR 632
Score = 47.8 bits (98), Expect(2) = 8e-023
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -1 / +3
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+P +++ V GY +P T +LVN WA+GRD W
Sbjct: 276 LLIPHRAESSCEVAGYMIPKDTQLLVNAWAIGRDPTIW 389
>gb|DR093538.1|DR093538 STRR1_8_H01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_8_H01_A033 5', mRNA sequence
Length = 866
Score = 79.4 bits (167), Expect(2) = 8e-023
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S +E++G +FEL+PFGAGRR+CPG+ V + ASLL F+W P DM+E
Sbjct: 413 SEMEYRGQNFELIPFGAGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDMSE 592
Query: 410 AFGITARR 387
FGIT +R
Sbjct: 593 RFGITLQR 616
Score = 47.8 bits (98), Expect(2) = 8e-023
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -1 / +2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+P +++ V GY +P T +LVN WA+GRD W
Sbjct: 260 LLIPHRAESSCEVAGYMIPKDTQLLVNAWAIGRDPTIW 373
>gb|DR092715.1|DR092715 STRR1_3_G12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_3_G12_A033 3', mRNA sequence
Length = 818
Score = 79.4 bits (167), Expect(2) = 8e-023
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S +E++G +FEL+PFGAGRR+CPG+ V + ASLL F+W P DM+E
Sbjct: 200 SEMEYRGQNFELIPFGAGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDMSE 379
Query: 410 AFGITARR 387
FGIT +R
Sbjct: 380 RFGITLQR 403
Score = 47.8 bits (98), Expect(2) = 8e-023
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -1 / +2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+P +++ V GY +P T +LVN WA+GRD W
Sbjct: 47 LLIPHRAESSCEVAGYMIPKDTQLLVNAWAIGRDPTIW 160
>gb|CF391927.1|CF391927 RTDR3_10_D12.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_D12_A022 5', mRNA
sequence
Length = 813
Score = 88.1 bits (186), Expect(2) = 8e-023
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -1 / -3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S+V+ +G+DF+L+PFGAGRR+C GM+ G+ V+L LA+LL FD P P DMAE
Sbjct: 451 SSVDVRGSDFQLIPFGAGRRICAGMSMGIRMVQLMLATLLHSFDLSLPNGQTPETLDMAE 272
Query: 410 AFGITARRKA 381
+ G+T R+ A
Sbjct: 271 SSGLTLRKAA 242
Score = 39.1 bits (79), Expect(2) = 8e-023
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1 / -3
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+PR + E + GY +P ++VN W + RD W
Sbjct: 604 LLVPRMAVEACEIEGYYIPKNARLVVNAWGMHRDPGVW 491
>gb|DR081343.1|DR081343 RTFEPL1_29_B02.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_29_B02_A029 3', mRNA sequence
Length = 766
Score = 88.1 bits (186), Expect(2) = 8e-023
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -1 / +1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S+V+ +G+DF+L+PFGAGRR+C GM+ G+ V+L LA+LL FD P P DMAE
Sbjct: 412 SSVDVRGSDFQLIPFGAGRRICAGMSMGIRMVQLMLATLLHSFDLSLPNGQTPETLDMAE 591
Query: 410 AFGITARRKA 381
+ G+T R+ A
Sbjct: 592 SSGLTLRKAA 621
Score = 39.1 bits (79), Expect(2) = 8e-023
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1 / +1
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+PR + E + GY +P ++VN W + RD W
Sbjct: 259 LLVPRMAVEACEIEGYYIPKNARLVVNAWGMHRDPGVW 372
>gb|CF672051.1|CF672051 RTCNT1_61_B08.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_61_B08_A029 3', mRNA sequence
Length = 760
Score = 79.4 bits (167), Expect(2) = 8e-023
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = -1 / -2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S +E++G +FEL+PFGAGRR+CPG+ V + ASLL F+W P DM+E
Sbjct: 345 SEMEYRGQNFELIPFGAGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDMSE 166
Query: 410 AFGITARR 387
FGIT +R
Sbjct: 165 RFGITLQR 142
Score = 47.8 bits (98), Expect(2) = 8e-023
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -1 / -2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+P +++ V GY +P T +LVN WA+GRD W
Sbjct: 498 LLIPHRAESSCEVAGYMIPKDTQLLVNAWAIGRDPTIW 385
>gb|CF667935.1|CF667935 RTCNT1_33_A02.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_33_A02_A029 5', mRNA sequence
Length = 740
Score = 79.4 bits (167), Expect(2) = 8e-023
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S +E++G +FEL+PFGAGRR+CPG+ V + ASLL F+W P DM+E
Sbjct: 452 SEMEYRGQNFELIPFGAGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDMSE 631
Query: 410 AFGITARR 387
FGIT +R
Sbjct: 632 RFGITLQR 655
Score = 47.8 bits (98), Expect(2) = 8e-023
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -1 / +2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+P +++ V GY +P T +LVN WA+GRD W
Sbjct: 299 LLIPHRAESSCEVAGYMIPKDTQLLVNAWAIGRDPTIW 412
>gb|CF387703.1|CF387703 RTDR1_19_C11.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_19_C11_A015 5', mRNA
sequence
Length = 702
Score = 89.5 bits (189), Expect(2) = 8e-023
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -1 / -3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL DW P P DMAE
Sbjct: 457 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSCDWSLPEGQLPENLDMAE 278
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 277 AYGLTLQK 254
Score = 37.7 bits (76), Expect(2) = 8e-023
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1 / -3
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ L PR + E V GY +P +LVN W + RD W
Sbjct: 619 STPXLXPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 497
>gb|DR025160.1|DR025160 STRS1_70_A08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_70_A08_A034 3', mRNA sequence
Length = 733
Score = 93.2 bits (197), Expect(2) = 1e-022
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 144 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 323
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 324 AYGLTLQK 347
Score = 33.1 bits (66), Expect(2) = 1e-022
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1 / +3
Query: 740 RQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
R + E V GY +P +LVN W + RD W
Sbjct: 3 RLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 104
>gb|DR013036.1|DR013036 HEAT1_16_C09.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_16_C09_A029 5', mRNA sequence
Length = 709
Score = 93.2 bits (197), Expect(2) = 1e-022
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / -3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SAV+ +G DFE++PFGAGRR+C G++ G+ V+L LASLL FDW P P DMAE
Sbjct: 566 SAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAE 387
Query: 410 AFGITARR 387
A+G+T ++
Sbjct: 386 AYGLTLQK 363
Score = 33.1 bits (66), Expect(2) = 1e-022
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1 / -3
Query: 740 RQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
R + E V GY +P +LVN W + RD W
Sbjct: 707 RLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVW 606
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 326,018,785
Number of Sequences: 355925
Number of extensions: 3964122
Number of successful extensions: 36441
Number of sequences better than 1.0e-020: 176
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 10945281935
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)