TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3670912.2.1
(844 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR096094.1|DR096094 STRR1_25_E05.g1_A033 Stem Response R... 145 5e-038
gb|DR024061.1|DR024061 STRS1_62_B04.b1_A034 Shoot tip pitch... 145 2e-035
gb|DR018722.1|DR018722 STRS1_25_F11.b1_A034 Shoot tip pitch... 145 2e-035
gb|BI397913.1|BI397913 NXPV_112_A12_F NXPV (Nsf Xylem Plani... 145 2e-035
gb|CF473870.1|CF473870 RTWW2_19_D07.b1_A021 Well-watered lo... 144 6e-034
gb|AY641535.1| Pinus pinaster phenylalanine ammonia lyase m... 130 6e-033
gb|DR015369.1|DR015369 STRS1_3_C07.b1_A034 Shoot tip pitch ... 130 9e-033
gb|CF393855.1|CF393855 RTDS2_1_C03.g1_A021 Drought-stressed... 130 9e-033
gb|BX683035.1|BX683035 BX683035 Pinus pinaster differenciat... 134 2e-032
gb|DR180235.1|DR180235 RTMNUT1_27_G04.b1_A029 Roots minus m... 128 2e-032
gb|DR093041.1|DR093041 STRR1_5_D12.g1_A033 Stem Response Re... 128 2e-032
gb|CO161976.1|CO161976 FLD1_32_H08.b1_A029 Root flooded Pin... 128 2e-032
gb|CO368157.1|CO368157 RTK1_39_A07.b1_A029 Roots minus pota... 128 2e-032
gb|DR057535.1|DR057535 RTNIT1_6_H04.b1_A029 Roots minus nit... 128 2e-032
gb|DR180315.1|DR180315 RTMNUT1_27_G04.g1_A029 Roots minus m... 128 2e-032
gb|CF394441.1|CF394441 RTDS2_5_D04.g1_A021 Drought-stressed... 128 2e-032
gb|DR166305.1|DR166305 RTPHOS1_11_B02.b2_A029 Roots minus p... 128 2e-032
gb|CO365573.1|CO365573 RTK1_17_H01.g1_A029 Roots minus pota... 128 2e-032
gb|DR090834.1|DR090834 RTAL1_17_D12.g1_A029 Roots plus adde... 128 2e-032
gb|CO162049.1|CO162049 FLD1_32_H08.g1_A029 Root flooded Pin... 128 1e-030
gb|DR177386.1|DR177386 RTMNUT1_5_B11.b1_A029 Roots minus mi... 128 1e-030
gb|CF668409.1|CF668409 RTCNT1_36_G07.b1_A029 Root control P... 128 1e-030
gb|CV033886.1|CV033886 RTNACL1_37_E08.b1_A029 Roots plus ad... 128 1e-030
gb|DR176982.1|DR176982 RTMNUT1_2_F09.b1_A029 Roots minus mi... 128 1e-030
gb|DR024757.1|DR024757 STRS1_67_G03.b1_A034 Shoot tip pitch... 128 1e-030
gb|DR088782.1|DR088782 RTAL1_4_B07.g1_A029 Roots plus added... 128 1e-030
gb|U39792.1|PTU39792 Pinus taeda phenylalanine ammonia-lyas... 122 2e-030
gb|DR100017.1|DR100017 STRR1_61_B01.b1_A033 Stem Response R... 111 7e-030
gb|CF472481.1|CF472481 RTDS1_10_F11.b1_A015 Drought-stresse... 128 4e-029
gb|CO365487.1|CO365487 RTK1_17_H01.b1_A029 Roots minus pota... 128 4e-029
gb|DR049407.1|DR049407 RTBOR1_16_F09.b1_A029 Roots plus add... 128 4e-029
gb|DR055955.1|DR055955 RTCA1_27_C08.b1_A029 Roots minus cal... 128 4e-029
gb|DR071339.1|DR071339 RTDK1_19_E09.b1_A029 Roots, dark Pin... 128 4e-029
gb|DR092959.1|DR092959 STRR1_5_D12.b1_A033 Stem Response Re... 128 4e-029
gb|DR098542.1|DR098542 STRR1_46_E10.b1_A033 Stem Response R... 128 4e-029
gb|DR090756.1|DR090756 RTAL1_17_D12.b1_A029 Roots plus adde... 127 1e-028
gb|DR164344.1|DR164344 RTFE1_48_H02.b1_A029 Roots minus iro... 127 1e-028
gb|DR019775.1|DR019775 STRS1_32_G12.b1_A034 Shoot tip pitch... 127 1e-028
gb|CX652996.1|CX652996 COLD1_62_F07.g1_A029 Root cold Pinus... 114 3e-028
gb|CX652912.1|CX652912 COLD1_62_F07.b1_A029 Root cold Pinus... 114 3e-028
gb|DR096563.1|DR096563 STRR1_28_F06.g1_A033 Stem Response R... 114 3e-028
gb|CF394331.1|CF394331 RTDS2_5_D04.b1_A021 Drought-stressed... 125 5e-028
dbj|BD224287.1| Materials and methods for the modification ... 111 1e-027
gb|DR096479.1|DR096479 STRR1_28_F06.b1_A033 Stem Response R... 114 7e-027
gb|BQ702005.1|BQ702005 NXSI_123_C05_F NXSI (Nsf Xylem Side ... 120 2e-026
gb|CO169856.1|CO169856 NDL1_10_C11.b1_A029 Needles control ... 117 1e-025
gb|BF517755.1|BF517755 NXSI_029_H02_F NXSI (Nsf Xylem Side ... 116 2e-025
gb|BX682663.1|BX682663 BX682663 Pinus pinaster differenciat... 105 2e-025
gb|CR393568.1|CR393568 CR393568 RN Pinus pinaster cDNA clon... 105 2e-025
gb|AF353967.1| Pinus sylvestris isolate Bro1 phenylalanine ... 104 3e-025
gb|AF353968.1| Pinus sylvestris isolate Bro2 phenylalanine ... 104 3e-025
gb|AF353969.1| Pinus sylvestris isolate Bro3 phenylalanine ... 104 3e-025
gb|AF353970.1| Pinus sylvestris isolate Bro4 phenylalanine ... 104 3e-025
gb|AF353971.1| Pinus sylvestris isolate Bro5 phenylalanine ... 104 3e-025
gb|AF353972.1| Pinus sylvestris isolate Kol1 phenylalanine ... 104 3e-025
gb|AF353973.1| Pinus sylvestris isolate Kol2 phenylalanine ... 104 3e-025
gb|AF353974.1| Pinus sylvestris isolate Kol3 phenylalanine ... 104 3e-025
gb|AF353975.1| Pinus sylvestris isolate Kol4 phenylalanine ... 104 3e-025
gb|AF353976.1| Pinus sylvestris isolate Kol5 phenylalanine ... 104 3e-025
gb|AF353977.1| Pinus sylvestris isolate Kir19 phenylalanine... 104 3e-025
gb|AF353978.1| Pinus sylvestris isolate Kir21 phenylalanine... 104 3e-025
gb|AF353979.1| Pinus sylvestris isolate Kir23 phenylalanine... 104 3e-025
gb|AF353980.1| Pinus sylvestris isolate Kir27 phenylalanine... 104 3e-025
gb|AF353981.1| Pinus sylvestris isolate Kir30 phenylalanine... 104 3e-025
gb|AF353982.1| Pinus sylvestris isolate Lillo1 phenylalanin... 104 3e-025
gb|AF353983.1| Pinus sylvestris isolate Lillo3 phenylalanin... 104 3e-025
gb|AF353984.1| Pinus sylvestris isolate Lillo17 phenylalani... 104 3e-025
gb|AF353985.1| Pinus sylvestris isolate Lillo19 phenylalani... 104 3e-025
gb|AF353986.1| Pinus sylvestris isolate Lillo22 phenylalani... 104 3e-025
gb|DR015446.1|DR015446 STRS1_3_C07.g1_A034 Shoot tip pitch ... 104 3e-025
gb|CF399103.1|CF399103 RTDS3_9_F02.g1_A022 Drought-stressed... 115 4e-025
gb|DR071433.1|DR071433 RTDK1_19_G09.g1_A029 Roots, dark Pin... 114 1e-024
gb|CR392391.1|CR392391 CR392391 RN Pinus pinaster cDNA clon... 102 1e-024
gb|CR393638.1|CR393638 CR393638 RN Pinus pinaster cDNA clon... 102 1e-024
gb|DR100213.1|DR100213 STRR1_62_B09.g1_A033 Stem Response R... 113 1e-024
gb|CO368236.1|CO368236 RTK1_39_A07.g1_A029 Roots minus pota... 102 1e-024
gb|CF399026.1|CF399026 RTDS3_9_F02.b1_A022 Drought-stressed... 102 1e-024
gb|AI812366.1|AI812366 1E12 Pine Lambda Zap Xylem library P... 94 1e-024
gb|BF220915.1|BF220915 NXCI_155_E08_F NXCI (Nsf Xylem Compr... 111 5e-024
gb|DR100077.1|DR100077 STRR1_61_B01.g1_A033 Stem Response R... 111 5e-024
gb|CF472260.1|CF472260 RTDS1_5_F12.g1_A015 Drought-stressed... 93 5e-024
gb|DR385719.1|DR385719 RTHG1_10_A05.g1_A029 Roots plus adde... 93 6e-024
gb|DR098524.1|DR098524 STRR1_46_C09.b1_A033 Stem Response R... 93 7e-024
gb|BF517035.1|BF517035 NXSI_008_D09_F NXSI (Nsf Xylem Side ... 98 7e-024
gb|DR101809.1|DR101809 STRR1_76_B02.b1_A033 Stem Response R... 93 7e-024
gb|DR101565.1|DR101565 STRR1_74_E10.b1_A033 Stem Response R... 93 9e-024
gb|DR025009.1|DR025009 STRS1_69_B11.b1_A034 Shoot tip pitch... 93 9e-024
gb|DR079562.1|DR079562 RTFEPL1_12_C09.b1_A029 Roots plus ad... 93 1e-023
gb|DR160726.1|DR160726 RTFE1_7_E06.g1_A029 Roots minus iron... 93 1e-023
gb|DR079640.1|DR079640 RTFEPL1_12_C09.g1_A029 Roots plus ad... 92 3e-023
gb|CR394028.1|CR394028 CR394028 RN Pinus pinaster cDNA clon... 95 2e-022
gb|CF670079.1|CF670079 RTCNT1_48_A09.b1_A029 Root control P... 106 2e-022
gb|CX647265.1|CX647265 COLD1_14_F11.g1_A029 Root cold Pinus... 106 2e-022
gb|DR088375.1|DR088375 RTAL1_1_F07.b1_A029 Roots plus added... 106 2e-022
gb|AY321089.1| Pinus pinaster phenylalanine ammonia-lyase (... 92 5e-022
gb|AY321088.1| Pinus pinaster phenylalanine ammonia-lyase (... 92 5e-022
gb|AY670394.1| Pinus taeda isolate 16 phenylalanine ammonia... 103 1e-021
gb|AY670395.1| Pinus taeda isolate 6 phenylalanine ammonia-... 103 1e-021
gb|AY670396.1| Pinus taeda isolate 4 phenylalanine ammonia-... 103 1e-021
gb|AY670397.1| Pinus taeda isolate 26 phenylalanine ammonia... 103 1e-021
gb|AY670398.1| Pinus taeda isolate 9 phenylalanine ammonia-... 103 1e-021
gb|AY670399.1| Pinus taeda isolate 23 phenylalanine ammonia... 103 1e-021
gb|AY670400.1| Pinus taeda isolate 22 phenylalanine ammonia... 103 1e-021
gb|AY670401.1| Pinus taeda isolate 32 phenylalanine ammonia... 103 1e-021
gb|AY670402.1| Pinus taeda isolate 18 phenylalanine ammonia... 103 1e-021
gb|AY670403.1| Pinus taeda isolate 21 phenylalanine ammonia... 103 1e-021
gb|AY670404.1| Pinus taeda isolate 31 phenylalanine ammonia... 103 1e-021
gb|AY670405.1| Pinus taeda isolate 5 phenylalanine ammonia-... 103 1e-021
gb|AY670406.1| Pinus taeda isolate 15 phenylalanine ammonia... 103 1e-021
gb|AY670407.1| Pinus taeda isolate 20 phenylalanine ammonia... 103 1e-021
gb|AY670408.1| Pinus taeda isolate 12 phenylalanine ammonia... 103 1e-021
gb|AY670409.1| Pinus taeda isolate 24 phenylalanine ammonia... 103 1e-021
gb|AY670410.1| Pinus taeda isolate 11 phenylalanine ammonia... 103 1e-021
gb|AY670411.1| Pinus taeda isolate 7 phenylalanine ammonia-... 103 1e-021
gb|AY670412.1| Pinus taeda isolate 25 phenylalanine ammonia... 103 1e-021
gb|AY670413.1| Pinus taeda isolate 13 phenylalanine ammonia... 103 1e-021
gb|AY670414.1| Pinus taeda isolate 30 phenylalanine ammonia... 103 1e-021
gb|AY670415.1| Pinus taeda isolate 14 phenylalanine ammonia... 103 1e-021
gb|AY670416.1| Pinus taeda isolate 10 phenylalanine ammonia... 103 1e-021
gb|AY670417.1| Pinus taeda isolate 2 phenylalanine ammonia-... 103 1e-021
gb|AY670418.1| Pinus taeda isolate 3 phenylalanine ammonia-... 103 1e-021
gb|AY670419.1| Pinus taeda isolate 19 phenylalanine ammonia... 103 1e-021
gb|AY670420.1| Pinus taeda isolate 28 phenylalanine ammonia... 103 1e-021
gb|AY670421.1| Pinus taeda isolate 8 phenylalanine ammonia-... 103 1e-021
gb|AY670422.1| Pinus taeda isolate 17 phenylalanine ammonia... 103 1e-021
gb|AY670423.1| Pinus taeda isolate 1 phenylalanine ammonia-... 103 1e-021
gb|AY670424.1| Pinus taeda isolate 29 phenylalanine ammonia... 103 1e-021
gb|AY670425.1| Pinus taeda isolate 27 phenylalanine ammonia... 103 1e-021
gb|BF517594.1|BF517594 NXSI_026_E02_F NXSI (Nsf Xylem Side ... 101 7e-021
gb|CF387334.1|CF387334 RTDR1_12_G04.b1_A015 Loblolly pine r... 93 8e-021
gb|CX649016.1|CX649016 COLD1_32_H12.b1_A029 Root cold Pinus... 93 9e-021
gb|AY874666.1| Pinus taeda isolate FBRC7 phenylalanine ammo... 100 1e-020
>gb|DR096094.1|DR096094 STRR1_25_E05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_25_E05_A033 5', mRNA sequence
Length = 805
Score = 145 bits (312), Expect(3) = 5e-038
Identities = 54/104 (51%), Positives = 75/104 (72%)
Frame = +2 / +1
Query: 254 DTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTE 433
D SI ++ FE++++A + EV+ R A E G+ LVPNRIK+CRSYPLY FVR E+G
Sbjct: 469 DASILTRIPAFEEELKARIVAEVQETRGAFEKGAALVPNRIKDCRSYPLYEFVRVELGAS 648
Query: 434 YLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPL 565
L G +RSPGE+ +KV VAIN+ K ++PL +CL+ WNG P+P+
Sbjct: 649 LLVGTNSRSPGEDFDKVFVAINESKAVEPLFKCLERWNGAPIPI 780
Score = 105 bits (224), Expect = 4e-022
Identities = 49/105 (46%), Positives = 65/105 (61%)
Frame = -2 / -3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFH RH ++GS L L+AT+TL SSPG+ + P P+S+ TN YSG*+
Sbjct: 782 QMGMGAPFHRSRHLNNGSTALLSLIATNTLSKSSPGERLLVPTSNEAPSSTLTNSYSG*E 603
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVS 253
R SLILLGTR PFS A + TS A + SN+ L +++ S
Sbjct: 602 RQSLILLGTRAAPFSKAPLVS*TSATMRALSSSSNAGILVRIEAS 468
Score = 26.3 bits (51), Expect(3) = 5e-038
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDLQTAI 127
G L +RFCEKDL AI
Sbjct: 304 GELLPSRFCEKDLLKAI 354
Score = 24.4 bits (47), Expect(3) = 5e-038
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y D+PCS
Sbjct: 361 EPVFSYIDNPCS 396
>gb|DR024061.1|DR024061 STRS1_62_B04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_62_B04_A034 3', mRNA sequence
Length = 792
Score = 145 bits (311), Expect(2) = 2e-035
Identities = 57/106 (53%), Positives = 76/106 (71%)
Frame = +2 / +1
Query: 248 DVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVG 427
D D SI +V FE++++A + +V RAA E G+ LVPNRIK+CRSYPLY FVR E+G
Sbjct: 394 DNDGSILTRVPAFEEELKARIVADVHETRAACEKGTALVPNRIKDCRSYPLYEFVRAELG 573
Query: 428 TEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPL 565
T L G +RSPGE+ +KV VAIN+ K + PL +CL+ WNG P+P+
Sbjct: 574 TSLLVGTDSRSPGEDFDKVFVAINEGKAVAPLFKCLEGWNGAPIPI 711
Score = 111 bits (236), Expect = 9e-024
Identities = 52/107 (48%), Positives = 69/107 (64%)
Frame = -2 / -2
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFH RH ++G+ L L+AT+TL SSPG+ + P VP S+ TN YSG*+
Sbjct: 713 QMGMGAPFHPSRHLNNGATALPSLIATNTLSKSSPGERLSVPTSNEVPNSALTNSYSG*E 534
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTS 247
R SLILLGTR +PFS AA + TS A + SN+ TL +++ S S
Sbjct: 533 RQSLILLGTRAVPFSQAALVS*TSATMRALSSSSNAGTLVRIEPSLS 393
Score = 24.4 bits (47), Expect(2) = 2e-035
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y D+PCS
Sbjct: 292 EPVFSYIDNPCS 327
>gb|DR018722.1|DR018722 STRS1_25_F11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_25_F11_A034 3', mRNA sequence
Length = 759
Score = 145 bits (311), Expect(2) = 2e-035
Identities = 57/106 (53%), Positives = 76/106 (71%)
Frame = +2 / +3
Query: 248 DVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVG 427
D D SI +V FE++++A + +V RAA E G+ LVPNRIK+CRSYPLY FVR E+G
Sbjct: 360 DNDGSILTRVPAFEEELKARIVADVHETRAACEKGTALVPNRIKDCRSYPLYEFVRAELG 539
Query: 428 TEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPL 565
T L G +RSPGE+ +KV VAIN+ K + PL +CL+ WNG P+P+
Sbjct: 540 TSLLVGTDSRSPGEDFDKVFVAINEGKAVAPLFKCLEGWNGAPIPI 677
Score = 111 bits (236), Expect = 9e-024
Identities = 52/107 (48%), Positives = 69/107 (64%)
Frame = -2 / -3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFH RH ++G+ L L+AT+TL SSPG+ + P VP S+ TN YSG*+
Sbjct: 679 QMGMGAPFHPSRHLNNGATALPSLIATNTLSKSSPGERLSVPTSNEVPNSALTNSYSG*E 500
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTS 247
R SLILLGTR +PFS AA + TS A + SN+ TL +++ S S
Sbjct: 499 RQSLILLGTRAVPFSQAALVS*TSATMRALSSSSNAGTLVRIEPSLS 359
Score = 24.4 bits (47), Expect(2) = 2e-035
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCS 170
E VF Y D+PCS
Sbjct: 258 EPVFSYIDNPCS 293
>gb|BI397913.1|BI397913 NXPV_112_A12_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_112_A12 5' similar to Arabidopsis
thaliana sequence At2g37040 phenylalanine ammonia lyase
(PAL1) see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 498
Score = 145 bits (311), Expect(2) = 2e-035
Identities = 54/104 (51%), Positives = 75/104 (72%)
Frame = +2 / +2
Query: 254 DTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTE 433
D SI ++ FE++++A + EV+ R A E G+ LVPNRIK+CRSYPLY FVR E+G
Sbjct: 137 DASILTRIPAFEEELKARIVAEVQETRGAFEKGAALVPNRIKDCRSYPLYEFVRVELGAS 316
Query: 434 YLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPL 565
L G +RSPGE+ +KV VAIN+ K ++PL +CL+ WNG P+P+
Sbjct: 317 LLVGTNSRSPGEDFDKVFVAINEGKAVEPLFKCLERWNGAPIPI 448
Score = 105 bits (224), Expect = 4e-022
Identities = 49/105 (46%), Positives = 65/105 (61%)
Frame = -2 / -1
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFH RH ++GS L L+AT+TL SSPG+ + P P+S+ TN YSG*+
Sbjct: 450 QMGMGAPFHRSRHLNNGSTALPSLIATNTLSKSSPGERLLVPTSNEAPSSTLTNSYSG*E 271
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVS 253
R SLILLGTR PFS A + TS A + SN+ L +++ S
Sbjct: 270 RQSLILLGTRAAPFSKAPLVS*TSATMRALSSSSNAGILVRIEAS 136
Score = 24.4 bits (47), Expect(2) = 2e-035
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 135 EAVFXYADDPCS 170
E VF Y D+PCS
Sbjct: 29 EPVFSYIDNPCS 64
>gb|CF473870.1|CF473870 RTWW2_19_D07.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_19_D07_A021 3', mRNA sequence
Length = 460
Score = 144 bits (310), Expect = 6e-034
Identities = 54/104 (51%), Positives = 75/104 (72%)
Frame = +2 / +3
Query: 254 DTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTE 433
D SI ++ FE++++A + EV+ R A E G+ LVPNRIK+CRSYPLY FVR E+G
Sbjct: 33 DASILTRIPAFEEELKARIVAEVQETRGAFEKGAALVPNRIKDCRSYPLYEFVRVELGAS 212
Query: 434 YLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPL 565
L G +RSPGE+ +KV VAIN+ K ++PL +CL+ WNG P+P+
Sbjct: 213 LLVGTNSRSPGEDFDKVFVAINEGKAVEPLFKCLERWNGVPIPI 344
Score = 105 bits (224), Expect = 4e-022
Identities = 49/105 (46%), Positives = 65/105 (61%)
Frame = -2 / -1
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFH RH ++GS L L+AT+TL SSPG+ + P P+S+ TN YSG*+
Sbjct: 346 QMGMGTPFHRSRHLNNGSTALPSLIATNTLSKSSPGERLLVPTSNEAPSSTLTNSYSG*E 167
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVS 253
R SLILLGTR PFS A + TS A + SN+ L +++ S
Sbjct: 166 RQSLILLGTRAAPFSKAPLVS*TSATMRALSSSSNAGILVRIEAS 32
>gb|AY641535.1| Pinus pinaster phenylalanine ammonia lyase mRNA, complete cds
Length = 2708
Score = 130 bits (279), Expect(3) = 6e-033
Identities = 53/107 (49%), Positives = 74/107 (69%)
Frame = +2 / +2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 1970 NGEGEKDPNTSIFNKIPLFEAELKAQLELQVSLARESYDKGTSPLPNRIQECRSYPLYEF 2149
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNG 550
VR ++GT+ L+G +T SPGE + V AIN+ K I PL +CL W G
Sbjct: 2150 VRNQLGTKLLSGTRTTSPGEVIEVVYDAINEDKVIGPLFKCLDGWKG 2290
Score = 24.9 bits (48), Expect(3) = 6e-033
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 1877 EHVFSYIDDPCN 1912
Score = 23.5 bits (45), Expect(3) = 6e-033
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +2
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 1820 GELLPGRFCEKDL 1858
>gb|DR015369.1|DR015369 STRS1_3_C07.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_3_C07_A034 3', mRNA sequence
Length = 911
Score = 130 bits (278), Expect(3) = 9e-033
Identities = 53/111 (47%), Positives = 76/111 (68%)
Frame = +2 / +2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 254 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 433
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + +V AI++ K I PL +CL W G P P
Sbjct: 434 VRNQLGTKLLSGTRTISPGEVIEEVYDAISEDKVIVPLFKCLDGWKGTPGP 586
Score = 24.9 bits (48), Expect(3) = 9e-033
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 161 EHVFSYIDDPCN 196
Score = 23.5 bits (45), Expect(3) = 9e-033
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +2
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 104 GELLPGRFCEKDL 142
>gb|CF393855.1|CF393855 RTDS2_1_C03.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_1_C03_A021 5', mRNA sequence
Length = 796
Score = 130 bits (278), Expect(3) = 9e-033
Identities = 53/111 (47%), Positives = 76/111 (68%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 343 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 522
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + +V AI++ K I PL +CL W G P P
Sbjct: 523 VRNQLGTKLLSGTRTISPGEVIEEVYDAISEDKVIVPLFKCLDGWKGTPGP 675
Score = 24.9 bits (48), Expect(3) = 9e-033
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 250 EHVFSYIDDPCN 285
Score = 23.5 bits (45), Expect(3) = 9e-033
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 193 GELLPGRFCEKDL 231
>gb|BX683035.1|BX683035 BX683035 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 127C11 similar to Phenylalanine ammonia-lyase
(EC 4.3.1.5), mRNA sequence
Length = 555
Score = 134 bits (288), Expect(2) = 2e-032
Identities = 55/111 (49%), Positives = 76/111 (68%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 94 NGEGEKDPNTSIFNKIPLFEAELKAQLELQVRLARESYDKGTSPLPNRIQECRSYPLYEF 273
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AIN+ K I PL +CL W G P P
Sbjct: 274 VRNQLGTKLLSGTRTTSPGEVIEVVYDAINEDKVIGPLFKCLDGWKGTPGP 426
Score = 24.9 bits (48), Expect(2) = 2e-032
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 1 EHVFSYIDDPCN 36
>gb|DR180235.1|DR180235 RTMNUT1_27_G04.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_27_G04_A029 3', mRNA sequence
Length = 907
Score = 128 bits (275), Expect(3) = 2e-032
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / -1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 622 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 443
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 442 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 290
Score = 24.9 bits (48), Expect(3) = 2e-032
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 715 EHVFSYIDDPCN 680
Score = 23.5 bits (45), Expect(3) = 2e-032
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / -1
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 772 GELLPGRFCEKDL 734
>gb|DR093041.1|DR093041 STRR1_5_D12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_D12_A033 5', mRNA sequence
Length = 896
Score = 128 bits (275), Expect(3) = 2e-032
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 441 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 620
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 621 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 773
Score = 24.9 bits (48), Expect(3) = 2e-032
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 348 EHVFSYIDDPCN 383
Score = 23.5 bits (45), Expect(3) = 2e-032
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +3
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 291 GELLPGRFCEKDL 329
>gb|CO161976.1|CO161976 FLD1_32_H08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_32_H08_A029 3', mRNA sequence
Length = 878
Score = 128 bits (275), Expect(3) = 2e-032
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / -1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 593 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 414
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 413 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 261
Score = 24.9 bits (48), Expect(3) = 2e-032
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 686 EHVFSYIDDPCN 651
Score = 23.5 bits (45), Expect(3) = 2e-032
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / -1
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 743 GELLPGRFCEKDL 705
>gb|CO368157.1|CO368157 RTK1_39_A07.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_39_A07_A029 3', mRNA sequence
Length = 852
Score = 128 bits (275), Expect(3) = 2e-032
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 186 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 365
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 366 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 518
Score = 24.9 bits (48), Expect(3) = 2e-032
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 93 EHVFSYIDDPCN 128
Score = 23.5 bits (45), Expect(3) = 2e-032
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +3
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 36 GELLPGRFCEKDL 74
>gb|DR057535.1|DR057535 RTNIT1_6_H04.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_6_H04_A029 3', mRNA sequence
Length = 823
Score = 128 bits (275), Expect(3) = 2e-032
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 166 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 345
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 346 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 498
Score = 24.9 bits (48), Expect(3) = 2e-032
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 73 EHVFSYIDDPCN 108
Score = 23.5 bits (45), Expect(3) = 2e-032
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 16 GELLPGRFCEKDL 54
>gb|DR180315.1|DR180315 RTMNUT1_27_G04.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_27_G04_A029 5', mRNA sequence
Length = 823
Score = 128 bits (275), Expect(3) = 2e-032
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / -1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 658 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 479
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 478 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 326
Score = 24.9 bits (48), Expect(3) = 2e-032
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 751 EHVFSYIDDPCN 716
Score = 23.5 bits (45), Expect(3) = 2e-032
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / -1
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 808 GELLPGRFCEKDL 770
>gb|CF394441.1|CF394441 RTDS2_5_D04.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_5_D04_A021 5', mRNA sequence
Length = 751
Score = 128 bits (275), Expect(3) = 2e-032
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 298 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 477
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 478 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 630
Score = 24.9 bits (48), Expect(3) = 2e-032
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 205 EHVFSYIDDPCN 240
Score = 23.5 bits (45), Expect(3) = 2e-032
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 148 GELLPGRFCEKDL 186
>gb|DR166305.1|DR166305 RTPHOS1_11_B02.b2_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_11_B02_A029 3', mRNA sequence
Length = 734
Score = 128 bits (275), Expect(3) = 2e-032
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / -3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 423 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 244
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 243 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 91
Score = 24.9 bits (48), Expect(3) = 2e-032
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 516 EHVFSYIDDPCN 481
Score = 23.5 bits (45), Expect(3) = 2e-032
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / -3
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 573 GELLPGRFCEKDL 535
>gb|CO365573.1|CO365573 RTK1_17_H01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_17_H01_A029 5', mRNA sequence
Length = 711
Score = 128 bits (275), Expect(3) = 2e-032
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 313 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 492
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 493 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 645
Score = 24.9 bits (48), Expect(3) = 2e-032
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 220 EHVFSYIDDPCN 255
Score = 23.5 bits (45), Expect(3) = 2e-032
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 163 GELLPGRFCEKDL 201
>gb|DR090834.1|DR090834 RTAL1_17_D12.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_17_D12_A029 5', mRNA sequence
Length = 706
Score = 128 bits (275), Expect(3) = 2e-032
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 237 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 416
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 417 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 569
Score = 24.9 bits (48), Expect(3) = 2e-032
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 144 EHVFSYIDDPCN 179
Score = 23.5 bits (45), Expect(3) = 2e-032
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +3
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 87 GELLPGRFCEKDL 125
>gb|CO162049.1|CO162049 FLD1_32_H08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_32_H08_A029 5', mRNA sequence
Length = 832
Score = 128 bits (275), Expect(2) = 1e-030
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / -2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 711 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 532
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 531 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 379
Score = 24.9 bits (48), Expect(2) = 1e-030
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 804 EHVFSYIDDPCN 769
>gb|DR177386.1|DR177386 RTMNUT1_5_B11.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_5_B11_A029 3', mRNA sequence
Length = 805
Score = 128 bits (275), Expect(2) = 1e-030
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 123 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 302
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 303 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 455
Score = 24.9 bits (48), Expect(2) = 1e-030
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 30 EHVFSYIDDPCN 65
>gb|CF668409.1|CF668409 RTCNT1_36_G07.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_G07_A029 3', mRNA sequence
Length = 780
Score = 128 bits (275), Expect(2) = 1e-030
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 122 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 301
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 302 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 454
Score = 24.9 bits (48), Expect(2) = 1e-030
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 29 EHVFSYIDDPCN 64
>gb|CV033886.1|CV033886 RTNACL1_37_E08.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_37_E08_A029 3', mRNA sequence
Length = 771
Score = 128 bits (275), Expect(2) = 1e-030
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 114 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 293
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 294 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 446
Score = 24.9 bits (48), Expect(2) = 1e-030
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 21 EHVFSYIDDPCN 56
>gb|DR176982.1|DR176982 RTMNUT1_2_F09.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_2_F09_A029 3', mRNA sequence
Length = 771
Score = 128 bits (275), Expect(2) = 1e-030
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 124 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 303
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 304 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 456
Score = 24.9 bits (48), Expect(2) = 1e-030
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 31 EHVFSYIDDPCN 66
>gb|DR024757.1|DR024757 STRS1_67_G03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_67_G03_A034 3', mRNA sequence
Length = 768
Score = 128 bits (275), Expect(2) = 1e-030
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 110 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 289
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 290 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 442
Score = 24.9 bits (48), Expect(2) = 1e-030
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 17 EHVFSYIDDPCN 52
>gb|DR088782.1|DR088782 RTAL1_4_B07.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_4_B07_A029 5', mRNA sequence
Length = 562
Score = 128 bits (275), Expect(2) = 1e-030
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 102 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 281
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 282 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 434
Score = 24.9 bits (48), Expect(2) = 1e-030
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 9 EHVFSYIDDPCN 44
>gb|U39792.1|PTU39792 Pinus taeda phenylalanine ammonia-lyase (lpPAL) gene, complete cds
Length = 2435
Score = 122 bits (261), Expect(3) = 2e-030
Identities = 50/107 (46%), Positives = 73/107 (68%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +P+RI+ECRSYPLY F
Sbjct: 1819 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPDRIQECRSYPLYEF 1998
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNG 550
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G
Sbjct: 1999 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKG 2139
Score = 24.9 bits (48), Expect(3) = 2e-030
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 1726 EHVFSYIDDPCN 1761
Score = 23.5 bits (45), Expect(3) = 2e-030
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 1669 GELLPGRFCEKDL 1707
>gb|DR100017.1|DR100017 STRR1_61_B01.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_61_B01_A033 3', mRNA sequence
Length = 854
Score = 111 bits (238), Expect(4) = 7e-030
Identities = 44/96 (45%), Positives = 66/96 (68%)
Frame = +2 / -3
Query: 263 IFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTEYLT 442
+F+++ F+++++A L +EV AR +NG + NRI +CR+YP+YRFVR E+GT+ LT
Sbjct: 336 VFSRIPIFQEELKARLEEEVPKARERFDNGDFPIANRINKCRTYPIYRFVRSELGTDLLT 157
Query: 443 GEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNG 550
G K RSPGE++ KV I Q K + +L+CL W G
Sbjct: 156 GPKWRSPGEDIEKVFEGICQGKIGNVILKCLDAWGG 49
Score = 26.7 bits (52), Expect(4) = 7e-030
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1 / -3
Query: 172 PNYALMQKXRAVLVEHAL 225
P+YALM + R VLV+ AL
Sbjct: 480 PSYALMLQLREVLVDEAL 427
Score = 24.9 bits (48), Expect(4) = 7e-030
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2 / -3
Query: 77 GRLHNARFCEKDLQTAI 127
G LH+ FCEK+L I
Sbjct: 573 GSLHDTGFCEKELLQVI 523
Score = 22.6 bits (43), Expect(4) = 7e-030
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / -3
Query: 135 EAVFXYADDPCSP 173
+ VF Y DDP +P
Sbjct: 516 QPVFSYIDDPTNP 478
>gb|CF472481.1|CF472481 RTDS1_10_F11.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_10_F11_A015 3', mRNA sequence
Length = 663
Score = 128 bits (275), Expect = 4e-029
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 5 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 184
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 185 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 337
>gb|CO365487.1|CO365487 RTK1_17_H01.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_17_H01_A029 3', mRNA sequence
Length = 730
Score = 128 bits (275), Expect = 4e-029
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 77 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 256
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 257 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 409
>gb|DR049407.1|DR049407 RTBOR1_16_F09.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_16_F09_A029 3', mRNA sequence
Length = 737
Score = 128 bits (275), Expect = 4e-029
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 58 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 237
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 238 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 390
>gb|DR055955.1|DR055955 RTCA1_27_C08.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_27_C08_A029 3', mRNA sequence
Length = 751
Score = 128 bits (275), Expect = 4e-029
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 76 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 255
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 256 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 408
>gb|DR071339.1|DR071339 RTDK1_19_E09.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_E09_A029 3', mRNA sequence
Length = 692
Score = 128 bits (275), Expect = 4e-029
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 4 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 183
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 184 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 336
>gb|DR092959.1|DR092959 STRR1_5_D12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_D12_A033 3', mRNA sequence
Length = 730
Score = 128 bits (275), Expect = 4e-029
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 69 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 248
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 249 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 401
>gb|DR098542.1|DR098542 STRR1_46_E10.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_46_E10_A033 3', mRNA sequence
Length = 754
Score = 128 bits (275), Expect = 4e-029
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 76 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 255
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 256 VRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 408
>gb|DR090756.1|DR090756 RTAL1_17_D12.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_17_D12_A029 3', mRNA sequence
Length = 666
Score = 127 bits (272), Expect = 1e-028
Identities = 53/111 (47%), Positives = 74/111 (66%)
Frame = +2 / +2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 8 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 187
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 188 VRNQLGTKLLFGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 340
>gb|DR164344.1|DR164344 RTFE1_48_H02.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_48_H02_A029 3', mRNA sequence
Length = 737
Score = 127 bits (272), Expect = 1e-028
Identities = 53/111 (47%), Positives = 74/111 (66%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 79 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 258
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 259 VRNQLGTKLLFGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 411
>gb|DR019775.1|DR019775 STRS1_32_G12.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_32_G12_A034 3', mRNA sequence
Length = 708
Score = 127 bits (271), Expect = 1e-028
Identities = 53/111 (47%), Positives = 74/111 (66%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
N + E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 21 NAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEF 200
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
VR ++GT+ L+G +T SPGE + V AI + K I PL +CL W G P P
Sbjct: 201 VRNQLGTKLLSGTRTISPGEVIEVVYDAICEDKVIVPLFKCLDGWKGTPGP 353
>gb|CX652996.1|CX652996 COLD1_62_F07.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_F07_A029 5', mRNA sequence
Length = 800
Score = 114 bits (243), Expect(3) = 3e-028
Identities = 45/96 (46%), Positives = 66/96 (68%)
Frame = +2 / +1
Query: 263 IFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTEYLT 442
+F+++ F+++++A L +EV AR +NG + NRI +CR+YP+YRFVR E+GT+ LT
Sbjct: 331 VFSRIPIFQEELKARLEEEVPKARERFDNGDFPIANRINKCRTYPIYRFVRSELGTDLLT 510
Query: 443 GEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNG 550
G K RSPGE++ KV I Q K D +L+CL W G
Sbjct: 511 GPKWRSPGEDIEKVFEGICQGKIGDVILKCLDAWGG 618
Score = 26.7 bits (52), Expect(3) = 3e-028
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1 / +1
Query: 172 PNYALMQKXRAVLVEHAL 225
P+YALM + R VLV+ AL
Sbjct: 187 PSYALMLQLREVLVDEAL 240
Score = 22.6 bits (43), Expect(3) = 3e-028
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCSP 173
+ VF Y DDP +P
Sbjct: 151 QPVFSYIDDPTNP 189
>gb|CX652912.1|CX652912 COLD1_62_F07.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_F07_A029 3', mRNA sequence
Length = 798
Score = 114 bits (243), Expect(3) = 3e-028
Identities = 45/96 (46%), Positives = 66/96 (68%)
Frame = +2 / +2
Query: 263 IFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTEYLT 442
+F+++ F+++++A L +EV AR +NG + NRI +CR+YP+YRFVR E+GT+ LT
Sbjct: 230 VFSRIPIFQEELKARLEEEVPKARERFDNGDFPIANRINKCRTYPIYRFVRSELGTDLLT 409
Query: 443 GEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNG 550
G K RSPGE++ KV I Q K D +L+CL W G
Sbjct: 410 GPKWRSPGEDIEKVFEGICQGKIGDVILKCLDAWGG 517
Score = 26.7 bits (52), Expect(3) = 3e-028
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1 / +2
Query: 172 PNYALMQKXRAVLVEHAL 225
P+YALM + R VLV+ AL
Sbjct: 86 PSYALMLQLREVLVDEAL 139
Score = 22.6 bits (43), Expect(3) = 3e-028
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 135 EAVFXYADDPCSP 173
+ VF Y DDP +P
Sbjct: 50 QPVFSYIDDPTNP 88
>gb|DR096563.1|DR096563 STRR1_28_F06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_28_F06_A033 5', mRNA sequence
Length = 667
Score = 114 bits (243), Expect(3) = 3e-028
Identities = 45/96 (46%), Positives = 66/96 (68%)
Frame = +2 / +3
Query: 263 IFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTEYLT 442
+F+++ F+++++A L +EV AR +NG + NRI +CR+YP+YRFVR E+GT+ LT
Sbjct: 285 VFSRIPIFQEELKARLEEEVPKARERFDNGDFPIANRINKCRTYPIYRFVRSELGTDLLT 464
Query: 443 GEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNG 550
G K RSPGE++ KV I Q K D +L+CL W G
Sbjct: 465 GPKWRSPGEDIEKVFEGICQGKIGDVILKCLDAWGG 572
Score = 26.7 bits (52), Expect(3) = 3e-028
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1 / +3
Query: 172 PNYALMQKXRAVLVEHAL 225
P+YALM + R VLV+ AL
Sbjct: 141 PSYALMLQLREVLVDEAL 194
Score = 22.6 bits (43), Expect(3) = 3e-028
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCSP 173
+ VF Y DDP +P
Sbjct: 105 QPVFSYIDDPTNP 143
>gb|CF394331.1|CF394331 RTDS2_5_D04.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_5_D04_A021 3', mRNA sequence
Length = 651
Score = 125 bits (267), Expect = 5e-028
Identities = 52/107 (48%), Positives = 73/107 (68%)
Frame = +2 / +2
Query: 242 ERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREE 421
E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY FVR +
Sbjct: 5 EKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEFVRNQ 184
Query: 422 VGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
+GT+ L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 185 LGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 325
>dbj|BD224287.1| Materials and methods for the modification of plant lignin content
Length = 765
Score = 111 bits (238), Expect(3) = 1e-027
Identities = 44/96 (45%), Positives = 66/96 (68%)
Frame = +2 / +1
Query: 263 IFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTEYLT 442
+F+++ F+++++A L +EV AR +NG + NRI +CR+YP+YRFVR E+GT+ LT
Sbjct: 205 VFSRIPIFQEELKARLEEEVPKARERFDNGDFPIANRINKCRTYPIYRFVRSELGTDLLT 384
Query: 443 GEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNG 550
G K RSPGE++ KV I Q K + +L+CL W G
Sbjct: 385 GPKWRSPGEDIEKVFEGICQGKIGNVILKCLDAWGG 492
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1 / +1
Query: 172 PNYALMQKXRAVLVEHAL 225
P+YALM + R VLV+ AL
Sbjct: 61 PSYALMLQLREVLVDEAL 114
Score = 22.6 bits (43), Expect(3) = 1e-027
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCSP 173
+ VF Y DDP +P
Sbjct: 25 QPVFSYIDDPTNP 63
>gb|DR096479.1|DR096479 STRR1_28_F06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_28_F06_A033 3', mRNA sequence
Length = 716
Score = 114 bits (243), Expect(2) = 7e-027
Identities = 45/96 (46%), Positives = 66/96 (68%)
Frame = +2 / +3
Query: 263 IFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTEYLT 442
+F+++ F+++++A L +EV AR +NG + NRI +CR+YP+YRFVR E+GT+ LT
Sbjct: 159 VFSRIPIFQEELKARLEEEVPKARERFDNGDFPIANRINKCRTYPIYRFVRSELGTDLLT 338
Query: 443 GEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNG 550
G K RSPGE++ KV I Q K D +L+CL W G
Sbjct: 339 GPKWRSPGEDIEKVFEGICQGKIGDVILKCLDAWGG 446
Score = 26.7 bits (52), Expect(2) = 7e-027
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1 / +3
Query: 172 PNYALMQKXRAVLVEHAL 225
P+YALM + R VLV+ AL
Sbjct: 15 PSYALMLQLREVLVDEAL 68
>gb|BQ702005.1|BQ702005 NXSI_123_C05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_123_C05 5' similar to Arabidopsis thaliana
sequence At2g37040 phenylalanine ammonia lyase (PAL1)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 454
Score = 120 bits (256), Expect = 2e-026
Identities = 50/103 (48%), Positives = 70/103 (67%)
Frame = +2 / +2
Query: 254 DTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTE 433
+TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY FVR ++GT+
Sbjct: 2 NTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEFVRNQLGTK 181
Query: 434 YLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
L+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 182 LLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 310
>gb|CO169856.1|CO169856 NDL1_10_C11.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_10_C11_A029 3', mRNA sequence
Length = 759
Score = 117 bits (250), Expect = 1e-025
Identities = 49/101 (48%), Positives = 68/101 (67%)
Frame = +2 / +2
Query: 260 SIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTEYL 439
SIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY FVR ++GT+ L
Sbjct: 110 SIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEFVRNQLGTKLL 289
Query: 440 TGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
+G +T SPGE + V AI++ K I PL +CL W G P P
Sbjct: 290 SGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKGTPGP 412
>gb|BF517755.1|BF517755 NXSI_029_H02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_029_H02 5' similar to Arabidopsis thaliana
sequence At2g37040 phenylalanine ammonia lyase (PAL1)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 500
Score = 116 bits (248), Expect = 2e-025
Identities = 49/103 (47%), Positives = 69/103 (66%)
Frame = +2 / +2
Query: 254 DTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTE 433
+TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY FVR ++GT+
Sbjct: 2 NTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPNRIQECRSYPLYEFVRNQLGTK 181
Query: 434 YLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLP 562
L+G +T SPGE + V AI++ K I PL +CL W P P
Sbjct: 182 LLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWXXXPGP 310
>gb|BX682663.1|BX682663 BX682663 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 119E03 similar to Phenylalanine ammonia-lyase
(EC 4.3.1.5), mRNA sequence
Length = 666
Score = 105 bits (223), Expect(3) = 2e-025
Identities = 41/80 (51%), Positives = 59/80 (73%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 420 NGEGEKDPNTSIFNKIPLFEAELKAQLELQVSLARESYDKGTSPLPNRIQECRSYPLYEF 599
Query: 410 VREEVGTEYLTGEKTRSPGE 469
VR ++GT+ L+G +T SPGE
Sbjct: 600 VRNQLGTKLLSGTRTTSPGE 659
Score = 24.9 bits (48), Expect(3) = 2e-025
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 327 EHVFSYIDDPCN 362
Score = 23.5 bits (45), Expect(3) = 2e-025
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +3
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 270 GELLPGRFCEKDL 308
>gb|CR393568.1|CR393568 CR393568 RN Pinus pinaster cDNA clone RN61H02, mRNA sequence
Length = 547
Score = 105 bits (223), Expect(3) = 2e-025
Identities = 41/80 (51%), Positives = 59/80 (73%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 298 NGEGEKDPNTSIFNKIPLFEAELKAQLELQVSLARESYDKGTSPLPNRIQECRSYPLYEF 477
Query: 410 VREEVGTEYLTGEKTRSPGE 469
VR ++GT+ L+G +T SPGE
Sbjct: 478 VRNQLGTKLLSGTRTTSPGE 537
Score = 24.9 bits (48), Expect(3) = 2e-025
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 205 EHVFSYIDDPCN 240
Score = 23.5 bits (45), Expect(3) = 2e-025
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 148 GELLPGRFCEKDL 186
>gb|AF353967.1| Pinus sylvestris isolate Bro1 phenylalanine ammonia-lyase (pal1)
gene, partial cds
Length = 2045
Score = 104 bits (222), Expect(3) = 3e-025
Identities = 41/80 (51%), Positives = 60/80 (75%)
Frame = +2 / +2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E+D +TSIF K+ FE +++A L +V AR + + G+ +PNRI+ECRSYPLY F
Sbjct: 1796 NGEGEKDPNTSIFNKIPLFEAELKAQLELQVSLARESYDKGTSPLPNRIQECRSYPLYEF 1975
Query: 410 VREEVGTEYLTGEKTRSPGE 469
VR+++GT+ L+G +T SPGE
Sbjct: 1976 VRKQLGTKLLSGTRTISPGE 2035
Score = 24.9 bits (48), Expect(3) = 3e-025
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 135 EAVFXYADDPCS 170
E VF Y DDPC+
Sbjct: 1703 EHVFSYIDDPCN 1738
Score = 23.5 bits (45), Expect(3) = 3e-025
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +2
Query: 77 GRLHNARFCEKDL 115
G L RFCEKDL
Sbjct: 1646 GELLPGRFCEKDL 1684
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 332,923,527
Number of Sequences: 355925
Number of extensions: 3937303
Number of successful extensions: 41942
Number of sequences better than 1.0e-020: 140
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 12293223060
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)