TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3665451.2.1
(911 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX653288.1|CX653288 COLD1_64_D05.g1_A029 Root cold Pinus... 77 3e-032
gb|CO362271.1|CO362271 RTK1_2_B08.g1_A029 Roots minus potas... 76 1e-029
gb|CX653214.1|CX653214 COLD1_64_D05.b1_A029 Root cold Pinus... 59 2e-026
gb|CO164268.1|CO164268 FLD1_46_H10.g1_A029 Root flooded Pin... 55 2e-026
gb|CO166779.1|CO166779 FLD1_64_A05.g1_A029 Root flooded Pin... 46 1e-025
gb|DR179239.1|DR179239 RTMNUT1_16_H05.g1_A029 Roots minus m... 46 1e-025
gb|CO201131.1|CO201131 RTCNT2_3_G07.g1_A029 Root control 2 ... 46 1e-025
gb|CO367652.1|CO367652 RTK1_35_E02.g1_A029 Roots minus pota... 50 1e-025
gb|DT637592.1|DT637592 EST1152523 Normalized pine embryo li... 46 2e-025
gb|DR094584.1|DR094584 STRR1_15_B04.g1_A033 Stem Response R... 46 2e-025
gb|DR692748.1|DR692748 EST1082836 Normalized pine embryo li... 46 2e-025
gb|CF669366.1|CF669366 RTCNT1_42_H11.g1_A029 Root control P... 46 2e-025
gb|CO174561.1|CO174561 NDL1_44_F07.g1_A029 Needles control ... 46 2e-025
gb|DR112581.1|DR112581 RTS1_29_D11.b1_A029 Roots minus sulf... 46 2e-025
gb|CF476221.1|CF476221 RTWW2_21_H10.g1_A021 Well-watered lo... 50 2e-025
gb|DT631091.1|DT631091 EST1146022 Normalized pine embryo li... 46 2e-025
gb|DR016361.1|DR016361 STRS1_9_D07.g1_A034 Shoot tip pitch ... 46 3e-025
gb|DR177854.1|DR177854 RTMNUT1_7_F12.g1_A029 Roots minus mi... 46 4e-025
gb|CF475072.1|CF475072 RTWW2_5_C03.g1_A021 Well-watered lob... 46 5e-025
gb|DR095700.1|DR095700 STRR1_23_B07.b1_A033 Stem Response R... 46 9e-025
gb|DR178423.1|DR178423 RTMNUT1_11_D11.g1_A029 Roots minus m... 46 2e-024
gb|CO201421.1|CO201421 RTCNT2_5_E03.g1_A029 Root control 2 ... 45 3e-024
gb|DR019805.1|DR019805 STRS1_32_C01.g1_A034 Shoot tip pitch... 44 3e-024
gb|CF397627.1|CF397627 RTDS3_4_C10.g1_A022 Drought-stressed... 46 4e-024
gb|CO165498.1|CO165498 FLD1_54_H11.g1_A029 Root flooded Pin... 46 1e-023
gb|CF474278.1|CF474278 RTWW2_17_G02.g1_A021 Well-watered lo... 45 2e-023
gb|DR682486.1|DR682486 EST1072561 Normalized pine embryo li... 44 2e-023
gb|BX784295.1|BX784295 BX784295 Pinus pinaster differenciat... 42 6e-023
gb|DR743526.1|DR743526 RTCU1_16_A09.g1_A029 Roots plus adde... 51 7e-023
gb|DR021938.1|DR021938 STRS1_47_G08.g1_A034 Shoot tip pitch... 44 2e-022
gb|DR025103.1|DR025103 STRS1_69_D04.g1_A034 Shoot tip pitch... 45 4e-022
gb|DR054944.1|DR054944 RTCA1_20_C07.g1_A029 Roots minus cal... 60 6e-022
gb|CF478089.1|CF478089 RTWW3_17_E04.g1_A022 Well-watered lo... 60 6e-022
gb|BX252449.1|BX252449 BX252449 Pinus pinaster differenciat... 42 2e-021
gb|CX647534.1|CX647534 COLD1_17_A03.g1_A029 Root cold Pinus... 79 3e-021
gb|DR163734.1|DR163734 RTFE1_44_C12.g1_A029 Roots minus iro... 48 4e-021
gb|DR010884.1|DR010884 HEAT1_2_A05.b1_A029 Root at 37 C for... 81 4e-021
gb|CO368012.1|CO368012 RTK1_38_C09.b1_A029 Roots minus pota... 51 5e-021
gb|DR069776.1|DR069776 RTDK1_9_H04.b1_A029 Roots, dark Pinu... 51 5e-021
gb|CO161264.1|CO161264 FLD1_27_E03.g1_A029 Root flooded Pin... 51 5e-021
gb|CO368093.1|CO368093 RTK1_38_C09.g1_A029 Roots minus pota... 51 5e-021
gb|CX650204.1|CX650204 COLD1_44_D11.b1_A029 Root cold Pinus... 51 5e-021
gb|DR111031.1|DR111031 RTS1_14_F10.g1_A029 Roots minus sulf... 51 5e-021
gb|DR384828.1|DR384828 RTHG1_4_G09.g1_A029 Roots plus added... 51 5e-021
gb|CF389631.1|CF389631 RTDR2_8_E03.g1_A021 Loblolly pine ro... 51 5e-021
gb|CF670972.1|CF670972 RTCNT1_53_G07.g1_A029 Root control P... 80 5e-021
gb|CF665055.1|CF665055 RTCNT1_13_C10.g1_A029 Root control P... 80 5e-021
gb|DR052259.1|DR052259 RTCA1_3_A10.g1_A029 Roots minus calc... 48 6e-021
gb|CO159550.1|CO159550 FLD1_14_F10.b1_A029 Root flooded Pin... 48 8e-021
gb|DR116745.1|DR116745 RTMG1_2_B09.g1_A029 Roots minus magn... 57 9e-021
gb|DR099114.1|DR099114 STRR1_53_E10.b1_A033 Stem Response R... 51 9e-021
gb|CF476726.1|CF476726 RTWW3_3_G05.b1_A022 Well-watered lob... 51 9e-021
>gb|CX653288.1|CX653288 COLD1_64_D05.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_64_D05_A029 5', mRNA sequence
Length = 759
Score = 77.1 bits (162), Expect(3) = 3e-032
Identities = 32/68 (47%), Positives = 42/68 (61%)
Frame = +3 / +3
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDLFGSKSELLLHHNPVHKKVPVLLHGDGR 209
VKL+G SP+ R AL LK + YE I ED+ +KSELLL NPVHKK+PVL+H
Sbjct: 39 VKLLGVIRSPFVARVRIALALKEIHYEFIEEDILINKSELLLQSNPVHKKIPVLIHNGKP 218
Query: 210 AISESLVI 233
+++
Sbjct: 219 VCESMIIV 242
Score = 58.8 bits (122), Expect(3) = 3e-032
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD G +D+A L +E++N + L P LC W +C + +K
Sbjct: 458 GKAYFGGDGIGLVDIALGGLWVLIQTVEKVNNIVLNDTQKTPLLCAWADQFCKADKVKNA 637
Query: 624 MPDREKLLAYFT 659
+PDR +L + +
Sbjct: 638 LPDRAELFVFLS 673
Score = 40.9 bits (83), Expect(3) = 3e-032
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA FI+ ++
Sbjct: 275 PFLMPRDPYDRALARFWAAFIDDKV 349
>gb|CO362271.1|CO362271 RTK1_2_B08.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_2_B08_A029 5', mRNA sequence
Length = 826
Score = 76.2 bits (160), Expect(3) = 1e-029
Identities = 33/68 (48%), Positives = 41/68 (60%)
Frame = +3 / +3
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDLFGSKSELLLHHNPVHKKVPVLLHGDGR 209
VKL+G SP+ R AL LKG+ YE I E+ KSELLL NPVHKKVPVL+H
Sbjct: 21 VKLLGVTLSPFVVRVYIALALKGIDYEFIQENFMHPKSELLLKSNPVHKKVPVLIHNGKP 200
Query: 210 AISESLVI 233
+++
Sbjct: 201 VCESMIIV 224
Score = 51.5 bits (106), Expect(3) = 1e-029
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +3 / +3
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD G +D+A +L + + +E+ L+ + P L W +C F+ +K
Sbjct: 453 GKPYFGGDEIGLIDIALGSLSAFITGMEKATHSVLIDAEKMPLLSAWLDRFCQFDVVKEA 632
Query: 624 MPD 632
MPD
Sbjct: 633 MPD 641
Score = 40.5 bits (82), Expect(3) = 1e-029
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3 / +3
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFW F++ +L
Sbjct: 258 PNLMPKDPYDRAIARFWFAFVDNKL 332
>gb|CX653214.1|CX653214 COLD1_64_D05.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_64_D05_A029 3', mRNA sequence
Length = 805
Score = 58.8 bits (122), Expect(3) = 2e-026
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +3 / +3
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD G +D+A L +E++N + L P LC W +C + +K
Sbjct: 360 GKAYFGGDGIGLVDIALGGLWVLIQTVEKVNNIVLNDTQKTPLLCAWADQFCKADKVKNA 539
Query: 624 MPDREKLLAYFT 659
+PDR +L + +
Sbjct: 540 LPDRAELFVFLS 575
Score = 57.9 bits (120), Expect(3) = 2e-026
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +3 / +1
Query: 90 LKGVPYELILEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
LK + YE I ED+ +KSELLL NPVHKK+PVL+H +++
Sbjct: 1 LKEIHYEFIEEDILINKSELLLQSNPVHKKIPVLIHNGKPVCESMIIV 144
Score = 40.9 bits (83), Expect(3) = 2e-026
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3 / +3
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA FI+ ++
Sbjct: 177 PFLMPRDPYDRALARFWAAFIDDKV 251
>gb|CO164268.1|CO164268 FLD1_46_H10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_46_H10_A029 5', mRNA sequence
Length = 900
Score = 55.1 bits (114), Expect(4) = 2e-026
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD G +D+A L +E++N + L P LC W +C + +K
Sbjct: 533 GKAYFGGDGIGLVDIALGGLWVLVQTVEKVNNIVLNDTQKTPLLCAWADQFCKADKVKNA 712
Query: 624 MPDREKLLAYFT 659
+PD +L + +
Sbjct: 713 LPDPGELFVFLS 748
Score = 43.2 bits (88), Expect(4) = 2e-026
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3 / +3
Query: 264 PPLLPADPYARAAARFWADFIETRLTKPFFM 356
P L+P DPY RA ARFWA FI+ ++ F +
Sbjct: 246 PFLMPRDPYDRAIARFWAAFIDDKVIHAFLL 338
Score = 43.2 bits (88), Expect(4) = 2e-026
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3 / +3
Query: 123 DLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
D+ +KSELLL NPVH K+PVL+H +++
Sbjct: 102 DILINKSELLLQSNPVHMKIPVLIHNGKPVCESMIIV 212
Score = 38.2 bits (77), Expect(4) = 2e-026
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3 / +1
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILE 122
VKL+G SP+ R AL LKG+ YE I E
Sbjct: 10 VKLLGVIRSPFVVRVRIALALKGIHYEFIEE 102
>gb|CO166779.1|CO166779 FLD1_64_A05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_64_A05_A029 5', mRNA sequence
Length = 843
Score = 46.4 bits (95), Expect(4) = 1e-025
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 494 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGWMDRFCKSDGVREV 673
Query: 624 MPDREK 641
MPD K
Sbjct: 674 MPDFAK 691
Score = 44.6 bits (91), Expect(4) = 1e-025
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3 / +2
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+++ KSELLL NPVHKK+PVL+H ++++
Sbjct: 149 IQETMQPKSELLLKSNPVHKKIPVLIHNGKPVCESTVIV 265
Score = 42.3 bits (86), Expect(4) = 1e-025
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 299 PNLMPKDPYDRAVARFWAAFVDDKI 373
Score = 38.2 bits (77), Expect(4) = 1e-025
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 65 VKLLGLTLSPFVVRVRIALALKGIDYEFIQETM 163
>gb|DR179239.1|DR179239 RTMNUT1_16_H05.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_16_H05_A029 5', mRNA sequence
Length = 761
Score = 46.0 bits (94), Expect(4) = 1e-025
Identities = 21/83 (25%), Positives = 38/83 (45%)
Frame = +3 / +3
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
G +F G G+ D+A L I+++ L+ P+LC W + + +K
Sbjct: 483 GNAYFGGVEIGFADIALGGLLVTIKAIQKVTNTVLVDPQKMPHLCAWIDRFSEIDLVKGI 662
Query: 624 MPDREKLLAYFTKNFDRYKAAVN 692
MPD K+L + + ++ +A N
Sbjct: 663 MPDPVKVLERVSYHRAKFTSAGN 731
Score = 43.7 bits (89), Expect(4) = 1e-025
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / +3
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P LLP DPY RA ARFWA F++ +L
Sbjct: 291 PNLLPKDPYDRAIARFWAAFVDDKL 365
Score = 42.8 bits (87), Expect(4) = 1e-025
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3 / +3
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLH 197
+ED +KS+LLL NP+HKKVPV +H
Sbjct: 141 IEDDSENKSQLLLQSNPIHKKVPVFIH 221
Score = 39.1 bits (79), Expect(4) = 1e-025
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3 / +3
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILED 125
VKL+G+ SP+ R AL LKG+ Y+ I +D
Sbjct: 57 VKLLGWLRSPFVTRVRIALALKGIQYQFIEDD 152
>gb|CO201131.1|CO201131 RTCNT2_3_G07.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_3_G07_A029 5', mRNA sequence
Length = 750
Score = 46.4 bits (95), Expect(4) = 1e-025
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 479 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGWMDRFCKSDGVREV 658
Query: 624 MPDREK 641
MPD K
Sbjct: 659 MPDFAK 676
Score = 44.6 bits (91), Expect(4) = 1e-025
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3 / +2
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+++ KSELLL NPVHKK+PVL+H ++++
Sbjct: 134 IQETMQPKSELLLKSNPVHKKIPVLIHNGKPVCESTVIV 250
Score = 42.3 bits (86), Expect(4) = 1e-025
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 284 PNLMPKDPYDRAVARFWAAFVDDKI 358
Score = 38.2 bits (77), Expect(4) = 1e-025
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 50 VKLLGLTLSPFVVRVRIALALKGIDYEFIQETM 148
>gb|CO367652.1|CO367652 RTK1_35_E02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_35_E02_A029 5', mRNA sequence
Length = 724
Score = 49.6 bits (102), Expect(4) = 1e-025
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD G++D+A + + + +E+ L+ + P L W +C + +K
Sbjct: 455 GKGYFGGDGIGFVDIALGGILAFVNPLEKATDSVLIDAEKMPLLSAWMDRFCEADGVKEV 634
Query: 624 MPDREKLLAY 653
+PD KLL +
Sbjct: 635 LPDPVKLLEF 664
Score = 44.1 bits (90), Expect(4) = 1e-025
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / +2
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLH 197
+E+ KSELLL NPVHK +PVLLH
Sbjct: 110 IEETMNPKSELLLKSNPVHKTIPVLLH 190
Score = 42.3 bits (86), Expect(4) = 1e-025
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA FI+ +L
Sbjct: 260 PFLMPKDPYDRAIARFWAAFIDDKL 334
Score = 35.4 bits (71), Expect(4) = 1e-025
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 26 VKLLGGRPSPFVLRVRIALALKGIHYEHIEETM 124
>gb|DT637592.1|DT637592 EST1152523 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMH541 3' end, mRNA sequence
Length = 895
Score = 46.4 bits (95), Expect(4) = 2e-025
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 518 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGWMDRFCKSDGVREV 697
Query: 624 MPDREK 641
MPD K
Sbjct: 698 MPDFAK 715
Score = 43.7 bits (89), Expect(4) = 2e-025
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3 / +2
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLH 197
+++ KSELLL NPVHKK+PVL+H
Sbjct: 173 IQETMQPKSELLLKSNPVHKKIPVLIH 253
Score = 43.2 bits (88), Expect(4) = 2e-025
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 323 PNLMPKDPYGRAVARFWAAFVDDKI 397
Score = 37.7 bits (76), Expect(4) = 2e-025
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 89 VKLLGVTLSPFVVRVRIALALKGIDYEFIQETM 187
>gb|DR094584.1|DR094584 STRR1_15_B04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_15_B04_A033 5', mRNA sequence
Length = 824
Score = 46.4 bits (95), Expect(4) = 2e-025
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 467 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGWMDRFCKSDGVREV 646
Query: 624 MPDREK 641
MPD K
Sbjct: 647 MPDFAK 664
Score = 44.6 bits (91), Expect(4) = 2e-025
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3 / +2
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+++ KSELLL NPVHKK+PVL+H ++++
Sbjct: 122 IQETMQPKSELLLKSNPVHKKIPVLIHNGKPVCESTVIV 238
Score = 42.3 bits (86), Expect(4) = 2e-025
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 272 PNLMPKDPYDRAVARFWAAFVDDKI 346
Score = 37.7 bits (76), Expect(4) = 2e-025
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 38 VKLLGVTLSPFVVRVRIALALKGIDYEFIQETM 136
>gb|DR692748.1|DR692748 EST1082836 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADP87 3' end, mRNA sequence
Length = 822
Score = 46.4 bits (95), Expect(4) = 2e-025
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3 / +3
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 510 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGWMDRFCKSDGVREV 689
Query: 624 MPDREK 641
MPD K
Sbjct: 690 MPDFAK 707
Score = 43.7 bits (89), Expect(4) = 2e-025
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3 / +3
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLH 197
+++ KSELLL NPVHKK+PVL+H
Sbjct: 165 IQETMQPKSELLLKSNPVHKKIPVLIH 245
Score = 43.2 bits (88), Expect(4) = 2e-025
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +3
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 315 PNLMPKDPYGRAVARFWAAFVDDKI 389
Score = 37.7 bits (76), Expect(4) = 2e-025
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +3
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 81 VKLLGVTLSPFVVRVRIALALKGIDYEFIQETM 179
>gb|CF669366.1|CF669366 RTCNT1_42_H11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_42_H11_A029 5', mRNA sequence
Length = 792
Score = 46.4 bits (95), Expect(4) = 2e-025
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3 / +1
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 442 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGWMDRFCKSDGVREV 621
Query: 624 MPDREK 641
MPD K
Sbjct: 622 MPDFAK 639
Score = 44.6 bits (91), Expect(4) = 2e-025
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3 / +1
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+++ KSELLL NPVHKK+PVL+H ++++
Sbjct: 97 IQETMQPKSELLLKSNPVHKKIPVLIHNGKPVCESTVIV 213
Score = 42.3 bits (86), Expect(4) = 2e-025
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 247 PNLMPKDPYDRAVARFWAAFVDDKI 321
Score = 37.7 bits (76), Expect(4) = 2e-025
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +1
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 13 VKLLGVTLSPFVVRVRIALALKGIDYEFIQETM 111
>gb|CO174561.1|CO174561 NDL1_44_F07.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_44_F07_A029 5', mRNA sequence
Length = 779
Score = 46.4 bits (95), Expect(4) = 2e-025
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3 / +1
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 460 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGWMDRFCKSDGVREV 639
Query: 624 MPDREK 641
MPD K
Sbjct: 640 MPDFAK 657
Score = 44.6 bits (91), Expect(4) = 2e-025
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3 / +1
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+++ KSELLL NPVHKK+PVL+H ++++
Sbjct: 115 IQETMQPKSELLLKSNPVHKKIPVLIHNGKPVCESTVIV 231
Score = 42.3 bits (86), Expect(4) = 2e-025
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 265 PNLMPKDPYDRAVARFWAAFVDDKI 339
Score = 37.7 bits (76), Expect(4) = 2e-025
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +1
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 31 VKLLGVTLSPFVVRVRIALALKGIDYEFIQETM 129
>gb|DR112581.1|DR112581 RTS1_29_D11.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_29_D11_A029 3', mRNA sequence
Length = 766
Score = 46.4 bits (95), Expect(4) = 2e-025
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3 / -3
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 278 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGWMDRFCKSDGVREV 99
Query: 624 MPDREK 641
MPD K
Sbjct: 98 MPDFAK 81
Score = 44.6 bits (91), Expect(4) = 2e-025
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3 / -3
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+++ KSELLL NPVHKK+PVL+H ++++
Sbjct: 623 IQETMQPKSELLLKSNPVHKKIPVLIHNGKPVCESTVIV 507
Score = 42.3 bits (86), Expect(4) = 2e-025
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / -3
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 473 PNLMPKDPYDRAVARFWAAFVDDKI 399
Score = 37.7 bits (76), Expect(4) = 2e-025
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / -3
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 707 VKLLGVTLSPFVVRVRIALALKGIDYEFIQETM 609
>gb|CF476221.1|CF476221 RTWW2_21_H10.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_21_H10_A021 5', mRNA sequence
Length = 747
Score = 49.6 bits (102), Expect(4) = 2e-025
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD G++D+A + + +E+ L+ + P L W +C + +K
Sbjct: 455 GKAYFGGDGIGFVDIALGGTLAFVNALEKATDSVLIEAEKMPLLSAWMDRFCEADGVKEV 634
Query: 624 MPDREKLLAY 653
+PD KLL +
Sbjct: 635 LPDPVKLLEF 664
Score = 42.8 bits (87), Expect(4) = 2e-025
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3 / +2
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLH 197
+E+ KSELLL NPVHK +PVL+H
Sbjct: 110 IEETMNPKSELLLKSNPVHKTIPVLVH 190
Score = 42.3 bits (86), Expect(4) = 2e-025
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA FI+ +L
Sbjct: 260 PFLMPKDPYDRAIARFWAAFIDDKL 334
Score = 36.3 bits (73), Expect(4) = 2e-025
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 26 VKLLGGRSSPFVLRVRIALALKGIRYEHIEETM 124
>gb|DT631091.1|DT631091 EST1146022 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF486 3' end, mRNA sequence
Length = 732
Score = 46.4 bits (95), Expect(4) = 2e-025
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3 / +1
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 520 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGWMDRFCKSDGVREV 699
Query: 624 MPDREK 641
MPD K
Sbjct: 700 MPDFAK 717
Score = 43.7 bits (89), Expect(4) = 2e-025
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3 / +1
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLH 197
+++ KSELLL NPVHKK+PVL+H
Sbjct: 175 IQETMQPKSELLLKSNPVHKKIPVLIH 255
Score = 43.2 bits (88), Expect(4) = 2e-025
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 325 PNLMPKDPYGRAVARFWAAFVDDKI 399
Score = 37.7 bits (76), Expect(4) = 2e-025
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +1
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 91 VKLLGVTLSPFVVRVRIALALKGIDYEFIQETM 189
>gb|DR016361.1|DR016361 STRS1_9_D07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_9_D07_A034 5', mRNA sequence
Length = 861
Score = 46.4 bits (95), Expect(4) = 3e-025
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3 / +1
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 469 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGWMDRFCKSDGVREV 648
Query: 624 MPDREK 641
MPD K
Sbjct: 649 MPDFAK 666
Score = 44.6 bits (91), Expect(4) = 3e-025
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3 / +1
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+++ KSELLL NPVHKK+PVL+H ++++
Sbjct: 124 IQETMQPKSELLLKSNPVHKKIPVLIHNGKPVCESTVIV 240
Score = 42.3 bits (86), Expect(4) = 3e-025
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 274 PNLMPKDPYDRAVARFWAAFVDDKI 348
Score = 36.8 bits (74), Expect(4) = 3e-025
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3 / +1
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
+KL+G SP+ R AL LKG+ YE I E +
Sbjct: 40 LKLLGLTLSPFVVRVRIALALKGIDYEFIQETM 138
>gb|DR177854.1|DR177854 RTMNUT1_7_F12.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_7_F12_A029 5', mRNA sequence
Length = 763
Score = 46.4 bits (95), Expect(4) = 4e-025
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3 / +1
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 460 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGWMDRFCKSDGVREV 639
Query: 624 MPDREK 641
MPD K
Sbjct: 640 MPDFAK 657
Score = 43.2 bits (88), Expect(4) = 4e-025
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 265 PNLMPKDPYGRAVARFWAAFVDDKI 339
Score = 42.8 bits (87), Expect(4) = 4e-025
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +3 / +1
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLH 197
+++ KSELLL NPVHKK+PV++H
Sbjct: 115 IQETMQPKSELLLKSNPVHKKIPVIIH 195
Score = 37.7 bits (76), Expect(4) = 4e-025
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +1
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 31 VKLLGVTLSPFVVRVRIALALKGIDYEFIQETM 129
>gb|CF475072.1|CF475072 RTWW2_5_C03.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_5_C03_A021 5', mRNA sequence
Length = 729
Score = 46.0 bits (94), Expect(4) = 5e-025
Identities = 21/83 (25%), Positives = 38/83 (45%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
G +F G G+ D+A L I+++ L+ P+LC W + + +K
Sbjct: 461 GNAYFGGVEIGFADIALGGLLVTIKAIQKVTNTVLVDPQKMPHLCAWIDRFSEIDLVKGI 640
Query: 624 MPDREKLLAYFTKNFDRYKAAVN 692
MPD K+L + + ++ +A N
Sbjct: 641 MPDPVKVLERVSYHRAKFTSAGN 709
Score = 42.8 bits (87), Expect(4) = 5e-025
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3 / +2
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLH 197
+ED +KS+LLL NP+HKKVPV +H
Sbjct: 119 IEDDSENKSQLLLQSNPIHKKVPVFIH 199
Score = 41.8 bits (85), Expect(4) = 5e-025
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P LLP DPY R ARFWA F++ +L
Sbjct: 269 PNLLPKDPYDRTIARFWAAFVDDKL 343
Score = 39.1 bits (79), Expect(4) = 5e-025
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3 / +2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILED 125
VKL+G+ SP+ R AL LKG+ Y+ I +D
Sbjct: 35 VKLLGWLRSPFVTRVRIALALKGIQYQFIEDD 130
>gb|DR095700.1|DR095700 STRR1_23_B07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_23_B07_A033 3', mRNA sequence
Length = 823
Score = 46.4 bits (95), Expect(4) = 9e-025
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3 / -3
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 344 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGWMDRFCKSDGVREV 165
Query: 624 MPDREK 641
MPD K
Sbjct: 164 MPDFAK 147
Score = 43.7 bits (89), Expect(4) = 9e-025
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3 / -3
Query: 138 KSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
KSELLL NPVHKK+PVL+H ++++
Sbjct: 668 KSELLLKSNPVHKKIPVLIHNGKPVCESTVIV 573
Score = 42.3 bits (86), Expect(4) = 9e-025
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / -3
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 539 PNLMPKDPYDRAVARFWAAFVDDKI 465
Score = 36.3 bits (73), Expect(4) = 9e-025
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3 / -2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELI 116
VKL+G SP+ R AL LKG+ YE I
Sbjct: 771 VKLLGLTLSPFVVRVRIALALKGIDYEFI 685
>gb|DR178423.1|DR178423 RTMNUT1_11_D11.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_11_D11_A029 5', mRNA sequence
Length = 663
Score = 46.0 bits (94), Expect(4) = 2e-024
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 470 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGWMDRFCKSDGVREV 649
Query: 624 MPD 632
MPD
Sbjct: 650 MPD 658
Score = 42.3 bits (86), Expect(4) = 2e-024
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 272 PNLMPKDPYDRAVARFWAAFVDDKI 346
Score = 42.3 bits (86), Expect(4) = 2e-024
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3 / +2
Query: 138 KSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
KSELLL NPVHKK+PVL+H ++++
Sbjct: 143 KSELLLK*NPVHKKIPVLIHNGKPVCESTVIV 238
Score = 40.9 bits (83), Expect(4) = 2e-024
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3 / +2
Query: 27 PVKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
PVKL+G SP+ R AL LKG+ YE I E +
Sbjct: 35 PVKLLGVTLSPFVVRVRIALALKGIDYEFIRETM 136
>gb|CO201421.1|CO201421 RTCNT2_5_E03.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_5_E03_A029 5', mRNA sequence
Length = 781
Score = 45.1 bits (92), Expect(4) = 3e-024
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
G +F G G+ D+A L I+++ L+ P+LC W + + +K
Sbjct: 458 GNAYFGGVEIGFADIALGGLLVTIKAIQKVTNTVLVDPQKMPHLCAWIDRFSEIDLVKGI 637
Query: 624 MPDREKLLAYFTKNFDRYKAAVN 692
MPD K+L + + ++ A N
Sbjct: 638 MPDPVKVLERVSYHRAKFTLAGN 706
Score = 42.8 bits (87), Expect(4) = 3e-024
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3 / +2
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLH 197
+ED +KS+LLL NP+HKKVPV +H
Sbjct: 116 IEDDSENKSQLLLQSNPIHKKVPVFIH 196
Score = 40.0 bits (81), Expect(4) = 3e-024
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA AR WA F++ +L
Sbjct: 266 PNLIPKDPYDRAIARLWAAFVDDKL 340
Score = 39.1 bits (79), Expect(4) = 3e-024
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3 / +2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILED 125
VKL+G+ SP+ R AL LKG+ Y+ I +D
Sbjct: 32 VKLLGWLRSPFVTRVRIALALKGIQYQFIEDD 127
>gb|DR019805.1|DR019805 STRS1_32_C01.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_32_C01_A034 5', mRNA sequence
Length = 722
Score = 43.7 bits (89), Expect(4) = 3e-024
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W + + +K
Sbjct: 467 GKAYFGGDQIGLIDIALGGLSAFIKGLEKATDSVLIDAEKMPLLSAWMDRFFKSDGVKEV 646
Query: 624 MPDREK 641
MPD K
Sbjct: 647 MPDVAK 664
Score = 42.8 bits (87), Expect(4) = 3e-024
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ +L
Sbjct: 272 PNLMPEDPYDRAIARFWAAFVDDKL 346
Score = 42.3 bits (86), Expect(4) = 3e-024
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3 / +2
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+++ KSELL+ NPVHKK+PVL+H +++
Sbjct: 122 IQESMHPKSELLVKSNPVHKKIPVLIHNGKPVCESMIIV 238
Score = 38.2 bits (77), Expect(4) = 3e-024
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 38 VKLLGVTLSPFVVRVRIALALKGIDYEFIQESM 136
>gb|CF397627.1|CF397627 RTDS3_4_C10.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_4_C10_A022 5', mRNA sequence
Length = 745
Score = 46.4 bits (95), Expect(4) = 4e-024
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3 / +1
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 454 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDAEKMPLLSGWMDRFCKSDGVREV 633
Query: 624 MPDREK 641
MPD K
Sbjct: 634 MPDFAK 651
Score = 44.6 bits (91), Expect(4) = 4e-024
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3 / +1
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+++ KSELLL NPVHKK+PVL+H ++++
Sbjct: 106 IQETMQPKSELLLKSNPVHKKIPVLIHNGKPVCESTVIV 222
Score = 42.3 bits (86), Expect(4) = 4e-024
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 256 PNLMPKDPYDRAVARFWAAFVDDKI 330
Score = 37.7 bits (76), Expect(4) = 4e-024
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +1
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 22 VKLLGVTLSPFVVRVRIALALKGIDYEFIQETM 120
>gb|CO165498.1|CO165498 FLD1_54_H11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_54_H11_A029 5', mRNA sequence
Length = 765
Score = 46.4 bits (95), Expect(4) = 1e-023
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3 / +1
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 472 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGWMDRFCKSDGVREV 651
Query: 624 MPDREK 641
MPD K
Sbjct: 652 MPDFAK 669
Score = 43.2 bits (88), Expect(4) = 1e-023
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3 / +1
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+++ KSELLL NPVHKK+PVL+H ++++
Sbjct: 124 IQETMQPKSELLLK*NPVHKKIPVLIHNGKPVCESTVIV 240
Score = 42.3 bits (86), Expect(4) = 1e-023
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 274 PNLMPKDPYDRAVARFWAAFVDDKI 348
Score = 37.7 bits (76), Expect(4) = 1e-023
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +1
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 40 VKLLGVTLSPFVVRVRIALALKGIDYEFIQETM 138
>gb|CF474278.1|CF474278 RTWW2_17_G02.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_17_G02_A021 5', mRNA sequence
Length = 633
Score = 44.6 bits (91), Expect(4) = 2e-023
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3 / +3
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+++ KSELLL NPVHKK+PVL+H ++++
Sbjct: 99 IQETMQPKSELLLKSNPVHKKIPVLIHNGKPVCESTVIV 215
Score = 43.2 bits (88), Expect(4) = 2e-023
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3 / +3
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A L + +E+ L+ + P L W +C + ++
Sbjct: 447 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDAEKMPLLSGWMDRFCKSDGVREV 626
Query: 624 MP 629
MP
Sbjct: 627 MP 632
Score = 42.3 bits (86), Expect(4) = 2e-023
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +3
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 249 PNLMPKDPYDRAVARFWAAFVDDKI 323
Score = 37.7 bits (76), Expect(4) = 2e-023
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +3
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 15 VKLLGVTLSPFVVRVRIALALKGIDYEFIQETM 113
>gb|DR682486.1|DR682486 EST1072561 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAA17 3' end, mRNA sequence
Length = 725
Score = 43.7 bits (89), Expect(4) = 2e-023
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3 / +2
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLH 197
+++ KSELLL NPVHKK+PVL+H
Sbjct: 167 IQETMQPKSELLLKSNPVHKKIPVLIH 247
Score = 43.2 bits (88), Expect(4) = 2e-023
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 317 PNLMPKDPYGRAVARFWAAFVDDKI 391
Score = 39.6 bits (80), Expect(4) = 2e-023
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD+ G +D+A + + +E+ L+ + P L +C + ++
Sbjct: 512 GKAYFGGDQIGLVDIALGGMSAFIEGLEKATDSVLIDPEKMPLLSGLMDRFCKSDGVREV 691
Query: 624 MPDREK 641
MPD K
Sbjct: 692 MPDFAK 709
Score = 37.7 bits (76), Expect(4) = 2e-023
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 83 VKLLGVTLSPFVVRVRIALALKGIDYEFIQETM 181
>gb|BX784295.1|BX784295 BX784295 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 132B07 similar to GLUTATHIONE S-TRANSFERASE
(EC 2.5.1.18), mRNA sequence
Length = 682
Score = 42.3 bits (86), Expect(4) = 6e-023
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3 / +3
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ +L
Sbjct: 294 PNLMPEDPYDRANARFWAAFVDDKL 368
Score = 42.3 bits (86), Expect(4) = 6e-023
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3 / +3
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+++ KSELL+ NPVHKK+PVL+H +++
Sbjct: 144 IQESMHPKSELLVKSNPVHKKIPVLIHNGKPVCESMIIV 260
Score = 41.8 bits (85), Expect(4) = 6e-023
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +3 / +3
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
G +F GD+ G +D+A L + +E+ L+ + P L W + + +K
Sbjct: 489 GXAYFGGDQIGLIDIALGGLSAFIKALEKATDSVLIDPEXMPLLSAWMDRFFKSDGVKEV 668
Query: 624 MPD 632
MPD
Sbjct: 669 MPD 677
Score = 35.9 bits (72), Expect(4) = 6e-023
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +3
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 60 VKLLGATLSPFVVRVCIALALKGIDYEFIQESM 158
>gb|DR743526.1|DR743526 RTCU1_16_A09.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_16_A09_A029 5', mRNA sequence
Length = 878
Score = 51.0 bits (105), Expect(4) = 7e-023
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3 / -3
Query: 453 FFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPCMPD 632
FF G++ G +D+ + W V+EE++GV L+ P L W + + ++ +P
Sbjct: 363 FFGGEQIGCVDIVLGSRARWLQVVEEMSGVKLVDPQATPLLHAWFHRFLSVYCVEKSLPQ 184
Query: 633 REKLLA 650
EKLLA
Sbjct: 183 FEKLLA 166
Score = 42.3 bits (86), Expect(4) = 7e-023
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / -3
Query: 270 LLPADPYARAAARFWADFIETRLT 341
LLP DPY RA ARFWA FI +L+
Sbjct: 567 LLPKDPYQRAIARFWAAFINNKLS 496
Score = 42.3 bits (86), Expect(4) = 7e-023
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3 / -3
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDLFGSKSELL 152
VK++G + SP++ A AL +KG+PYE + EDL LL
Sbjct: 804 VKVLGSWASPFSHIARMALDVKGIPYEYVEEDLQNKSQLLL 682
Score = 31.8 bits (63), Expect(4) = 7e-023
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3 / -3
Query: 201 DGRAISESLVIAEYVDEAFDG 263
+G+ I ESL+I +Y+DE ++G
Sbjct: 639 NGKTICESLIILQYIDETWEG 577
>gb|DR021938.1|DR021938 STRS1_47_G08.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_47_G08_A034 5', mRNA sequence
Length = 615
Score = 44.1 bits (90), Expect(4) = 2e-022
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +3 / +1
Query: 114 ILEDLFGSKSELLLHHNPVHKKVPVLLH 197
++++ KSELLL NPVHKK+PV++H
Sbjct: 97 VIQETMQPKSELLLKSNPVHKKIPVIIH 180
Score = 43.2 bits (88), Expect(4) = 2e-022
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 250 PNLMPKDPYGRAVARFWAAFVDDKI 324
Score = 37.7 bits (76), Expect(4) = 2e-022
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3 / +1
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYC 599
GK +F GD+ G +D+A L + +E+ L+ + P L W +C
Sbjct: 445 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGWMDRFC 600
Score = 35.9 bits (72), Expect(4) = 2e-022
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3 / +2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYEL 113
VKL+G SP+ R AL LKG+ YEL
Sbjct: 17 VKLLGVTLSPFVVRVRIALALKGIDYEL 100
>gb|DR025103.1|DR025103 STRS1_69_D04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_69_D04_A034 5', mRNA sequence
Length = 642
Score = 44.6 bits (91), Expect(4) = 4e-022
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3 / +1
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+++ KSELLL NPVHKK+PVL+H ++++
Sbjct: 115 IQETMQPKSELLLKSNPVHKKIPVLIHNGKPVCESTVIV 231
Score = 42.3 bits (86), Expect(4) = 4e-022
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ ++
Sbjct: 265 PNLMPKDPYDRAVARFWAAFVDDKI 339
Score = 38.2 bits (77), Expect(4) = 4e-022
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +1
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 31 VKLLGLTLSPFVVRVRIALALKGIDYEFIQETM 129
Score = 34.5 bits (69), Expect(4) = 4e-022
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3 / +1
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRW 584
GK +F GD+ G +D+A L + +E+ L+ + P L W
Sbjct: 460 GKAYFGGDQIGLVDIALGGLSAFIKGLEKATDSVLIDPEKMPLLSGW 600
>gb|DR054944.1|DR054944 RTCA1_20_C07.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_20_C07_A029 5', mRNA sequence
Length = 784
Score = 59.7 bits (124), Expect(3) = 6e-022
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +3 / +3
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDLFGSKSELLLHHNPVHKKVPVLLH 197
VK++ + SP+ R L KGV YE E++ KSELLL NPV+K+VPVL+H
Sbjct: 21 VKVLSQWPSPFCMRVLIGLEEKGVRYEYQEENILARKSELLLQTNPVYKRVPVLIH 188
Score = 43.2 bits (88), Expect(3) = 6e-022
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3 / +3
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +FAGD+ G+LD+ PW +E L + + + P L W + E++K
Sbjct: 444 GKPYFAGDQFGFLDIVLIPNTPWFYALETLAKWKIPWDGEFPRLQGWMKRCLERESVKKI 623
Query: 624 MPDREKLLAY 653
+ D K+ Y
Sbjct: 624 LQDPLKVSEY 653
Score = 39.1 bits (79), Expect(3) = 6e-022
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +3 / +3
Query: 273 LPADPYARAAARFWADFIETR 335
+P++PY RA RFWADF++T+
Sbjct: 264 MPSNPYDRALGRFWADFMDTK 326
>gb|CF478089.1|CF478089 RTWW3_17_E04.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_17_E04_A022 5', mRNA sequence
Length = 761
Score = 59.7 bits (124), Expect(3) = 6e-022
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +3 / +3
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDLFGSKSELLLHHNPVHKKVPVLLH 197
VK++ + SP+ R L KGV YE E++ KSELLL NPV+K+VPVL+H
Sbjct: 30 VKVLSQWPSPFCMRVLIGLEEKGVRYEYQEENILARKSELLLQTNPVYKRVPVLIH 197
Score = 43.2 bits (88), Expect(3) = 6e-022
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3 / +3
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +FAGD+ G+LD+ PW +E L + + + P L W + E++K
Sbjct: 453 GKPYFAGDQFGFLDIVLIPNTPWFYALETLAKWKIPWDGEFPRLQGWMKRCLERESVKKI 632
Query: 624 MPDREKLLAY 653
+ D K+ Y
Sbjct: 633 LQDPLKVSEY 662
Score = 39.1 bits (79), Expect(3) = 6e-022
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +3 / +3
Query: 273 LPADPYARAAARFWADFIETR 335
+P++PY RA RFWADF++T+
Sbjct: 273 MPSNPYDRALGRFWADFMDTK 335
>gb|BX252449.1|BX252449 BX252449 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP064G01 similar to PROBABLE GLUTATHIONE S
TRANSFERASE, mRNA sequence
Length = 668
Score = 42.3 bits (86), Expect(4) = 2e-021
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA F++ +L
Sbjct: 302 PNLMPEDPYDRANARFWAAFVDDKL 376
Score = 42.3 bits (86), Expect(4) = 2e-021
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3 / +2
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+++ KSELL+ NPVHKK+PVL+H +++
Sbjct: 152 IQESMHPKSELLVKSNPVHKKIPVLIHNGKPVCESMIIV 268
Score = 36.8 bits (74), Expect(4) = 2e-021
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRW 584
GK +F GD+ G +D+A L + +E+ L+ + P L W
Sbjct: 497 GKAYFGGDQIGLIDIALGGLSAFIKALEKATDSVLIDPEKMPLLSAW 637
Score = 35.9 bits (72), Expect(4) = 2e-021
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDL 128
VKL+G SP+ R AL LKG+ YE I E +
Sbjct: 68 VKLLGATLSPFVVRVCIALALKGIDYEFIQESM 166
>gb|CX647534.1|CX647534 COLD1_17_A03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_17_A03_A029 5', mRNA sequence
Length = 478
Score = 79.0 bits (166), Expect(2) = 3e-021
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = +3 / +2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDLFGSKSELLLHHNPVHKKVPVLLH 197
VKL+G SP+ R AL LKG+ YE I ED+ +KSELLL NPVHKK+PVL+H
Sbjct: 26 VKLLGVIRSPFVARVRIALALKGIHYEFIEEDVAINKSELLLQSNPVHKKIPVLIH 193
Score = 43.2 bits (88), Expect(2) = 3e-021
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRLTKPFFM 356
P L+P DPY RA ARFWA FI+ ++ F +
Sbjct: 263 PFLMPRDPYDRAIARFWAAFIDDKVIHAFLL 355
>gb|DR163734.1|DR163734 RTFE1_44_C12.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_44_C12_A029 5', mRNA sequence
Length = 902
Score = 48.3 bits (99), Expect(4) = 4e-021
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3 / +3
Query: 135 SKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
SKSELLL NP+HKK+PVL+H D + +++
Sbjct: 165 SKSELLLKMNPIHKKIPVLIHNDKPVLESLIIV 263
Score = 40.5 bits (82), Expect(4) = 4e-021
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +3 / +3
Query: 447 KRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPCM 626
K +F G++ GY+D+A W E + + E P L W E++K +
Sbjct: 492 KPYFGGEQFGYMDIAFIPFASWFQAWEVMGNWKIPLETQFPRLHEWVNACMERESVKKVL 671
Query: 627 PDREKL 644
P EK+
Sbjct: 672 PHPEKV 689
Score = 40.5 bits (82), Expect(4) = 4e-021
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3 / +3
Query: 267 PLLPADPYARAAARFWADFIETRL 338
P +P+ Y RA ARFWADF++ +L
Sbjct: 297 PFMPSSAYERARARFWADFVDKKL 368
Score = 32.2 bits (64), Expect(4) = 4e-021
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3 / +3
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDLFGSKSELL 152
VK++ + SP+ R L KGV YE LE+L LL
Sbjct: 63 VKVLNLWASPFGHRVLVGLEEKGVTYEYQLENLASKSELLL 185
>gb|DR010884.1|DR010884 HEAT1_2_A05.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_2_A05_A029 3', mRNA sequence
Length = 743
Score = 80.8 bits (170), Expect(2) = 4e-021
Identities = 33/68 (48%), Positives = 43/68 (63%)
Frame = +3 / -2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDLFGSKSELLLHHNPVHKKVPVLLHGDGR 209
VKL+G SP+ R AL LKG+ YE I ED+ +KSELLL NPVHKK+PVL+H
Sbjct: 676 VKLLGVIRSPFVTRVRIALALKGIHYEFIEEDILINKSELLLQSNPVHKKIPVLIHNGKP 497
Query: 210 AISESLVI 233
+++
Sbjct: 496 VCESMIIV 473
Score = 40.9 bits (83), Expect(2) = 4e-021
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3 / -2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA FI+ ++
Sbjct: 439 PFLMPRDPYDRAIARFWAAFIDDKV 365
>gb|CO368012.1|CO368012 RTK1_38_C09.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_38_C09_A029 3', mRNA sequence
Length = 849
Score = 51.0 bits (105), Expect(3) = 5e-021
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3 / +1
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD G+LD+ L + +E+ L+ + P L W +C + +K
Sbjct: 487 GKAYFGGDGIGFLDIELGGLLAFLKALEKGTDSVLIDAEKMPLLSAWMDRFCEADGVKDV 666
Query: 624 MPDREKLLAY 653
MPD KLL +
Sbjct: 667 MPDPVKLLEF 696
Score = 45.5 bits (93), Expect(3) = 5e-021
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3 / +1
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+E+ +KSELLL NPVHKK+PVL+H ++++
Sbjct: 142 IEENTQNKSELLLKSNPVHKKIPVLIHNGKPVCESTIIV 258
Score = 42.3 bits (86), Expect(3) = 5e-021
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA FI+ +L
Sbjct: 292 PFLMPKDPYDRAIARFWAAFIDDKL 366
>gb|DR069776.1|DR069776 RTDK1_9_H04.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_9_H04_A029 3', mRNA sequence
Length = 834
Score = 51.0 bits (105), Expect(3) = 5e-021
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3 / -2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD G+LD+ L + +E+ L+ + P L W +C + +K
Sbjct: 362 GKAYFGGDGIGFLDIELGGLLAFLKALEKGTDSVLIDAEKMPLLSAWMDRFCEADGVKDV 183
Query: 624 MPDREKLLAY 653
MPD KLL +
Sbjct: 182 MPDPVKLLEF 153
Score = 45.5 bits (93), Expect(3) = 5e-021
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3 / -2
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+E+ +KSELLL NPVHKK+PVL+H ++++
Sbjct: 707 IEENTQNKSELLLKSNPVHKKIPVLIHNGKPVCESTIIV 591
Score = 42.3 bits (86), Expect(3) = 5e-021
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / -2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA FI+ +L
Sbjct: 557 PFLMPKDPYDRAIARFWAAFIDDKL 483
>gb|CO161264.1|CO161264 FLD1_27_E03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_27_E03_A029 5', mRNA sequence
Length = 832
Score = 51.0 bits (105), Expect(3) = 5e-021
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3 / +1
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD G+LD+ L + +E+ L+ + P L W +C + +K
Sbjct: 454 GKAYFGGDGIGFLDIELGGLLAFLKALEKGTDSVLIDAEKMPLLSAWMDRFCEADGVKDV 633
Query: 624 MPDREKLLAY 653
MPD KLL +
Sbjct: 634 MPDPVKLLEF 663
Score = 45.5 bits (93), Expect(3) = 5e-021
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3 / +1
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+E+ +KSELLL NPVHKK+PVL+H ++++
Sbjct: 109 IEENTQNKSELLLKSNPVHKKIPVLIHNGKPVCESTIIV 225
Score = 42.3 bits (86), Expect(3) = 5e-021
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA FI+ +L
Sbjct: 259 PFLMPKDPYDRAIARFWAAFIDDKL 333
>gb|CO368093.1|CO368093 RTK1_38_C09.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_38_C09_A029 5', mRNA sequence
Length = 832
Score = 51.0 bits (105), Expect(3) = 5e-021
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD G+LD+ L + +E+ L+ + P L W +C + +K
Sbjct: 461 GKAYFGGDGIGFLDIELGGLLAFLKALEKGTDSVLIDAEKMPLLSAWMDRFCEADGVKDV 640
Query: 624 MPDREKLLAY 653
MPD KLL +
Sbjct: 641 MPDPVKLLEF 670
Score = 45.5 bits (93), Expect(3) = 5e-021
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3 / +2
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+E+ +KSELLL NPVHKK+PVL+H ++++
Sbjct: 116 IEENTQNKSELLLKSNPVHKKIPVLIHNGKPVCESTIIV 232
Score = 42.3 bits (86), Expect(3) = 5e-021
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA FI+ +L
Sbjct: 266 PFLMPKDPYDRAIARFWAAFIDDKL 340
>gb|CX650204.1|CX650204 COLD1_44_D11.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_44_D11_A029 3', mRNA sequence
Length = 829
Score = 51.0 bits (105), Expect(3) = 5e-021
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3 / -1
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD G+LD+ L + +E+ L+ + P L W +C + +K
Sbjct: 400 GKAYFGGDGIGFLDIELGGLLAFLKALEKGTDSVLIDAEKMPLLSAWMDRFCEADGVKDV 221
Query: 624 MPDREKLLAY 653
MPD KLL +
Sbjct: 220 MPDPVKLLEF 191
Score = 45.5 bits (93), Expect(3) = 5e-021
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3 / -1
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+E+ +KSELLL NPVHKK+PVL+H ++++
Sbjct: 745 IEENTQNKSELLLKSNPVHKKIPVLIHNGKPVCESTIIV 629
Score = 42.3 bits (86), Expect(3) = 5e-021
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / -1
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA FI+ +L
Sbjct: 595 PFLMPKDPYDRAIARFWAAFIDDKL 521
>gb|DR111031.1|DR111031 RTS1_14_F10.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_14_F10_A029 5', mRNA sequence
Length = 807
Score = 51.0 bits (105), Expect(3) = 5e-021
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3 / -2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD G+LD+ L + +E+ L+ + P L W +C + +K
Sbjct: 422 GKAYFGGDGIGFLDIELGGLLAFLKALEKGTDSVLIDAEKMPLLSAWMDRFCEADGVKDV 243
Query: 624 MPDREKLLAY 653
MPD KLL +
Sbjct: 242 MPDPVKLLEF 213
Score = 45.5 bits (93), Expect(3) = 5e-021
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3 / -2
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+E+ +KSELLL NPVHKK+PVL+H ++++
Sbjct: 767 IEENTQNKSELLLKSNPVHKKIPVLIHNGKPVCESTIIV 651
Score = 42.3 bits (86), Expect(3) = 5e-021
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / -2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA FI+ +L
Sbjct: 617 PFLMPKDPYDRAIARFWAAFIDDKL 543
>gb|DR384828.1|DR384828 RTHG1_4_G09.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_4_G09_A029 5', mRNA sequence
Length = 771
Score = 51.0 bits (105), Expect(3) = 5e-021
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3 / +3
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD G+LD+ L + +E+ L+ + P L W +C + +K
Sbjct: 501 GKAYFGGDGIGFLDIELGGLLAFLKALEKGTDSVLIDAEKMPLLSAWMDRFCEADGVKDV 680
Query: 624 MPDREKLLAY 653
MPD KLL +
Sbjct: 681 MPDPVKLLEF 710
Score = 45.5 bits (93), Expect(3) = 5e-021
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3 / +3
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+E+ +KSELLL NPVHKK+PVL+H ++++
Sbjct: 156 IEENTQNKSELLLKSNPVHKKIPVLIHNGKPVCESTIIV 272
Score = 42.3 bits (86), Expect(3) = 5e-021
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / +3
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA FI+ +L
Sbjct: 306 PFLMPKDPYDRAIARFWAAFIDDKL 380
>gb|CF389631.1|CF389631 RTDR2_8_E03.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_8_E03_A021 5', mRNA
sequence
Length = 734
Score = 51.0 bits (105), Expect(3) = 5e-021
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3 / +1
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +F GD G+LD+ L + +E+ L+ + P L W +C + +K
Sbjct: 478 GKAYFGGDGIGFLDIELGGLLAFLKALEKGTDSVLIDAEKMPLLSAWMDRFCEADGVKDV 657
Query: 624 MPDREKLLAY 653
MPD KLL +
Sbjct: 658 MPDPVKLLEF 687
Score = 45.5 bits (93), Expect(3) = 5e-021
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3 / +1
Query: 117 LEDLFGSKSELLLHHNPVHKKVPVLLHGDGRAISESLVI 233
+E+ +KSELLL NPVHKK+PVL+H ++++
Sbjct: 133 IEENTQNKSELLLKSNPVHKKIPVLIHNGKPVCESTIIV 249
Score = 42.3 bits (86), Expect(3) = 5e-021
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA FI+ +L
Sbjct: 283 PFLMPKDPYDRAIARFWAAFIDDKL 357
>gb|CF670972.1|CF670972 RTCNT1_53_G07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_53_G07_A029 5', mRNA sequence
Length = 714
Score = 80.3 bits (169), Expect(2) = 5e-021
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = +3 / +1
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDLFGSKSELLLHHNPVHKKVPVLLHGDGR 209
VKL+G SP+ R AL LKG+ YE I ED+ +KSELLL NPVHKK+PVL+H
Sbjct: 46 VKLLGVIRSPFVARVRIALALKGIHYEFIEEDVAINKSELLLQSNPVHKKIPVLIHNGKP 225
Query: 210 AISESLVI 233
++++
Sbjct: 226 VCESNIIV 249
Score = 40.9 bits (83), Expect(2) = 5e-021
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA FI+ ++
Sbjct: 283 PFLMPRDPYDRAIARFWAAFIDDKV 357
>gb|CF665055.1|CF665055 RTCNT1_13_C10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_13_C10_A029 5', mRNA sequence
Length = 659
Score = 80.3 bits (169), Expect(2) = 5e-021
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = +3 / +2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDLFGSKSELLLHHNPVHKKVPVLLHGDGR 209
VKL+G SP+ R AL LKG+ YE I ED+ +KSELLL NPVHKK+PVL+H
Sbjct: 11 VKLLGVIRSPFVARVRIALALKGIHYEFIEEDVAINKSELLLQSNPVHKKIPVLIHNGKP 190
Query: 210 AISESLVI 233
++++
Sbjct: 191 VCESNIIV 214
Score = 40.9 bits (83), Expect(2) = 5e-021
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 264 PPLLPADPYARAAARFWADFIETRL 338
P L+P DPY RA ARFWA FI+ ++
Sbjct: 248 PFLMPRDPYDRAIARFWAAFIDDKV 322
>gb|DR052259.1|DR052259 RTCA1_3_A10.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_3_A10_A029 5', mRNA sequence
Length = 792
Score = 48.3 bits (99), Expect(4) = 6e-021
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3 / +3
Query: 120 EDLFGSKSELLLHHNPVHKKVPVLLHGD 203
E+ SKSELLL NP+HKK+PVL+H D
Sbjct: 150 EENLASKSELLLKMNPIHKKIPVLIHND 233
Score = 41.4 bits (84), Expect(4) = 6e-021
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = +3 / +3
Query: 447 KRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPCM 626
K +F G++ GY+D+A W E + + E P L W E++K +
Sbjct: 492 KPYFGGEQFGYMDIAFIPFASWFQAWEVMGNWKIPLETQFPRLHEWVNACMERESVKKVL 671
Query: 627 PDREKLLAYFTKNFDRY 677
P EK+ + + R+
Sbjct: 672 PHPEKVAEFAMQMRQRF 722
Score = 40.5 bits (82), Expect(4) = 6e-021
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3 / +3
Query: 267 PLLPADPYARAAARFWADFIETRL 338
P +P+ Y RA ARFWADF++ +L
Sbjct: 297 PFMPSSAYERARARFWADFVDKKL 368
Score = 29.9 bits (59), Expect(4) = 6e-021
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3 / +3
Query: 207 RAISESLVIAEYVDEAF 257
+ +SESL+I EY+DEA+
Sbjct: 234 KPVSESLIIVEYIDEAW 284
>gb|CO159550.1|CO159550 FLD1_14_F10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_14_F10_A029 3', mRNA sequence
Length = 846
Score = 48.3 bits (99), Expect(4) = 8e-021
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3 / +3
Query: 120 EDLFGSKSELLLHHNPVHKKVPVLLHGD 203
E+ SKSELLL NP+HKK+PVL+H D
Sbjct: 87 EENLASKSELLLKMNPIHKKIPVLIHND 170
Score = 41.4 bits (84), Expect(4) = 8e-021
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = +3 / +3
Query: 447 KRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPCM 626
K +F G++ GY+D+A W E + + E P L W E++K +
Sbjct: 429 KPYFGGEQFGYMDIAFIPFASWFQAWEVMGNWKIPLETQFPRLHEWVNACMERESVKKVL 608
Query: 627 PDREKLLAYFTKNFDRY 677
P EK+ + + R+
Sbjct: 609 PHPEKVAEFAMQMRQRF 659
Score = 40.5 bits (82), Expect(4) = 8e-021
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3 / +3
Query: 267 PLLPADPYARAAARFWADFIETRL 338
P +P+ Y RA ARFWADF++ +L
Sbjct: 234 PFMPSSAYERARARFWADFVDKKL 305
Score = 29.9 bits (59), Expect(4) = 8e-021
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3 / +3
Query: 207 RAISESLVIAEYVDEAF 257
+ +SESL+I EY+DEA+
Sbjct: 171 KPVSESLIIVEYIDEAW 221
>gb|DR116745.1|DR116745 RTMG1_2_B09.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_2_B09_A029 5', mRNA sequence
Length = 888
Score = 56.5 bits (117), Expect(3) = 9e-021
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = +3 / +2
Query: 30 VKLIGFFGSPYAFRAEAALCLKGVPYELILEDLFGSKSELLLHHNPVHKKVPVLLH 197
VK++ S + R L KGV YE E++ KSELLL NPVHK+VPVL+H
Sbjct: 14 VKVLSQSPSGFCMRVLIGLEEKGVRYEYQEENVLSCKSELLLQTNPVHKRVPVLIH 181
Score = 43.2 bits (88), Expect(3) = 9e-021
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3 / +2
Query: 444 GKRFFAGDRPGYLDVAASALGPWRSVIEELNGVALLSEDDHPNLCRWTRDYCAFEALKPC 623
GK +FAGD+ G+LD+ PW +E L + + + P L W + E++K
Sbjct: 437 GKPYFAGDQFGFLDIVLIPNTPWFYALETLAKWKIPWDGEFPRLQGWMKRCLERESVKKI 616
Query: 624 MPDREKLLAY 653
+ D K+ Y
Sbjct: 617 LQDPLKVSEY 646
Score = 38.2 bits (77), Expect(3) = 9e-021
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3 / +2
Query: 276 PADPYARAAARFWADFIETR 335
P++PY RA RFWADF++T+
Sbjct: 260 PSNPYDRALGRFWADFMDTK 319
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 291,212,856
Number of Sequences: 355925
Number of extensions: 3394740
Number of successful extensions: 71244
Number of sequences better than 1.0e-020: 56
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 13390430000
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)