TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3510875.2.1
(707 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF386502.1|CF386502 RTDR1_14_G10.g1_A015 Loblolly pine r... 102 5e-032
gb|AW289859.1|AW289859 NXNV007A04F Nsf Xylem Normal wood Ve... 115 3e-025
gb|CD026514.1|CD026514 NXNV007A04 Nsf Xylem Normal wood Ver... 115 3e-025
gb|DR022950.1|DR022950 STRS1_54_C05.g1_A034 Shoot tip pitch... 115 3e-025
gb|DR177549.1|DR177549 RTMNUT1_6_A10.b1_A029 Roots minus mi... 115 3e-025
gb|BX250265.1|BX250265 BX250265 Pinus pinaster differenciat... 114 8e-025
gb|BX250817.1|BX250817 BX250817 Pinus pinaster differenciat... 114 8e-025
gb|CF386401.1|CF386401 RTDR1_14_G10.b1_A015 Loblolly pine r... 113 1e-024
gb|CF669964.1|CF669964 RTCNT1_47_E08.b1_A029 Root control P... 113 1e-024
gb|BX679702.1|BX679702 BX679702 RS Pinus pinaster cDNA clon... 113 1e-024
gb|DR021229.1|DR021229 STRS1_43_F05.b1_A034 Shoot tip pitch... 113 1e-024
gb|DR021309.1|DR021309 STRS1_43_F05.g1_A034 Shoot tip pitch... 113 1e-024
gb|DR051229.1|DR051229 RTBOR1_28_C05.g1_A029 Roots plus add... 113 1e-024
gb|DR091221.1|DR091221 RTAL1_20_D08.b1_A029 Roots plus adde... 113 1e-024
gb|DR091294.1|DR091294 RTAL1_20_D08.g1_A029 Roots plus adde... 113 1e-024
gb|DR097369.1|DR097369 STRR1_34_F04.b1_A033 Stem Response R... 113 1e-024
gb|DR178641.1|DR178641 RTMNUT1_13_B11.b1_A029 Roots minus m... 113 1e-024
gb|DR178714.1|DR178714 RTMNUT1_13_B11.g1_A029 Roots minus m... 113 1e-024
gb|DR744523.1|DR744523 RTCU1_23_B12.b1_A029 Roots plus adde... 113 1e-024
gb|CO197274.1|CO197274 GEO1_5_D02.b1_A029 Root gravitropism... 113 2e-024
gb|BX252998.1|BX252998 BX252998 Pinus pinaster differenciat... 112 2e-024
gb|BX253009.1|BX253009 BX253009 Pinus pinaster differenciat... 112 2e-024
gb|BM367007.1|BM367007 NXLV_043_D05_F NXLV (Nsf Xylem Late ... 112 3e-024
gb|DR177548.1|DR177548 RTMNUT1_6_A09.b1_A029 Roots minus mi... 112 3e-024
gb|DR071426.1|DR071426 RTDK1_19_F12.g1_A029 Roots, dark Pin... 111 4e-024
gb|DR161766.1|DR161766 RTFE1_13_F12.g1_A029 Roots minus iro... 111 4e-024
gb|DR165873.1|DR165873 RTPHOS1_7_H02.g1_A029 Roots minus ph... 111 4e-024
gb|BX678872.1|BX678872 BX678872 RS Pinus pinaster cDNA clon... 111 5e-024
gb|BX680364.1|BX680364 BX680364 RS Pinus pinaster cDNA clon... 111 5e-024
gb|DR021245.1|DR021245 STRS1_43_G12.b1_A034 Shoot tip pitch... 111 5e-024
gb|CF390756.1|CF390756 RTDR2_17_G06.g1_A021 Loblolly pine r... 111 7e-024
gb|CF402368.1|CF402368 RTWW1_17_G04.b1_A015 Well-watered lo... 111 7e-024
gb|CF402464.1|CF402464 RTWW1_17_G04.g1_A015 Well-watered lo... 111 7e-024
gb|CO363853.1|CO363853 RTK1_12_E10.b1_A029 Roots minus pota... 111 7e-024
gb|CO363861.1|CO363861 RTK1_12_F10.b1_A029 Roots minus pota... 111 7e-024
gb|CO363943.1|CO363943 RTK1_12_E10.g1_A029 Roots minus pota... 111 7e-024
gb|CO363955.1|CO363955 RTK1_12_F10.g1_A029 Roots minus pota... 111 7e-024
gb|CO366205.1|CO366205 RTK1_26_B05.g1_A029 Roots minus pota... 111 7e-024
gb|CX646099.1|CX646099 COLD1_7_G03.b1_A029 Root cold Pinus ... 111 7e-024
gb|CX646184.1|CX646184 COLD1_7_G03.g1_A029 Root cold Pinus ... 111 7e-024
gb|CX649870.1|CX649870 COLD1_42_B02.b1_A029 Root cold Pinus... 111 7e-024
gb|CX649939.1|CX649939 COLD1_42_B02.g1_A029 Root cold Pinus... 111 7e-024
gb|DR019595.1|DR019595 STRS1_31_D04.b1_A034 Shoot tip pitch... 111 7e-024
gb|DR019669.1|DR019669 STRS1_31_D04.g1_A034 Shoot tip pitch... 111 7e-024
gb|DR024390.1|DR024390 STRS1_64_D10.g1_A034 Shoot tip pitch... 111 7e-024
gb|DR102370.1|DR102370 STRR1_80_D02.g1_A033 Stem Response R... 111 7e-024
gb|DR113082.1|DR113082 RTS1_32_H03.g1_A029 Roots minus sulf... 111 7e-024
gb|DR179873.1|DR179873 RTMNUT1_25_C03.b1_A029 Roots minus m... 111 7e-024
gb|DR078507.1|DR078507 RTFEPL1_5_D06.b1_A029 Roots plus add... 110 1e-023
gb|DR078583.1|DR078583 RTFEPL1_5_D06.g1_A029 Roots plus add... 110 1e-023
gb|DR177168.1|DR177168 RTMNUT1_3_C03.g1_A029 Roots minus mi... 110 1e-023
gb|DR385526.1|DR385526 RTHG1_9_E06.b1_A029 Roots plus added... 110 1e-023
gb|DR385604.1|DR385604 RTHG1_9_E06.g1_A029 Roots plus added... 110 1e-023
gb|CF672033.1|CF672033 RTCNT1_60_H08.g1_A029 Root control P... 110 1e-023
gb|CF398287.1|CF398287 RTDS3_24_A04.g1_A022 Drought-stresse... 109 2e-023
gb|DR162472.1|DR162472 RTFE1_18_B06.b1_A029 Roots minus iro... 109 3e-023
gb|CF395269.1|CF395269 RTDS2_10_D07.g1_A021 Drought-stresse... 108 4e-023
gb|DR744593.1|DR744593 RTCU1_23_B12.g1_A029 Roots plus adde... 108 5e-023
gb|DR021322.1|DR021322 STRS1_43_G12.g1_A034 Shoot tip pitch... 107 7e-023
gb|BE458026.1|BE458026 NXCI_010_H10_F NXCI (Nsf Xylem Compr... 104 6e-022
gb|BG039357.1|BG039357 NXSI_098_B06_F NXSI (Nsf Xylem Side ... 104 6e-022
gb|AW495792.1|AW495792 NXNV_065_D12_FF Nsf Xylem Normal woo... 104 9e-022
gb|CD027748.1|CD027748 NXNV_065_D12_F Nsf Xylem Normal wood... 104 9e-022
gb|DR162543.1|DR162543 RTFE1_18_B06.g1_A029 Roots minus iro... 103 2e-021
gb|BQ197800.1|BQ197800 NXLV120_E02_F NXLV (Nsf Xylem Late w... 101 4e-021
>gb|CF386502.1|CF386502 RTDR1_14_G10.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_14_G10_A015 5', mRNA
sequence
Length = 706
Score = 102 bits (217), Expect(2) = 5e-032
Identities = 44/85 (51%), Positives = 55/85 (64%)
Frame = -2 / -3
Query: 523 QGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMAR 344
QG Y + Q+ F LLM FVF +G++NGSTL+++G+N L VREM IVGGSG FR AR
Sbjct: 404 QGIYVSSSQEDFHLLMATTFVFESGKYNGSTLAMIGKNAALEQVREMPIVGGSGLFRFAR 225
Query: 343 GYVQAHTIDSGATSGTTVVQYTVNV 269
GY A T +G VV+Y V V
Sbjct: 224 GYALARTHAFELNTGNAVVEYNVTV 150
Score = 55.6 bits (115), Expect(2) = 5e-032
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = -2 / -2
Query: 685 YFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
YFHD+VAG N TAV++A FGAV+ +DD LT GP
Sbjct: 564 YFHDLVAGKNVTAVKVASAPTTNSSATLFGAVMVMDDWLTEGP 436
>gb|AW289859.1|AW289859 NXNV007A04F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV007A04 5', mRNA sequence
Length = 449
Score = 115 bits (246), Expect = 3e-025
Identities = 53/108 (49%), Positives = 65/108 (60%)
Frame = -2 / +3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +GRAQG Y A Q+ F LLM FVF +G +NGSTL+++G+
Sbjct: 60 MVRVMDDWLTEGPEGTSKMLGRAQGIYVSACQEKFQLLMATTFVFESGRYNGSTLAMVGK 239
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N VL VREM IVGGSG FR ARGY AHT +G VV+Y V V
Sbjct: 240 NAVLEQVREMPIVGGSGFFRFARGYALAHTHSIDFKTGNAVVEYNVTV 383
>gb|CD026514.1|CD026514 NXNV007A04 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV007A04 5' similar to Arabidopsis thaliana sequence
At1g65870 F12P19.3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 449
Score = 115 bits (246), Expect = 3e-025
Identities = 53/108 (49%), Positives = 65/108 (60%)
Frame = -2 / +3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +GRAQG Y A Q+ F LLM FVF +G +NGSTL+++G+
Sbjct: 60 MVRVMDDWLTEGPEGTSKMLGRAQGIYVSACQEKFQLLMATTFVFESGRYNGSTLAMVGK 239
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N VL VREM IVGGSG FR ARGY AHT +G VV+Y V V
Sbjct: 240 NAVLEQVREMPIVGGSGFFRFARGYALAHTHSIDFKTGNAVVEYNVTV 383
>gb|DR022950.1|DR022950 STRS1_54_C05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_54_C05_A034 5', mRNA sequence
Length = 758
Score = 115 bits (246), Expect = 3e-025
Identities = 51/108 (47%), Positives = 66/108 (61%)
Frame = -2 / +1
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +GRAQG Y A Q+ F LLM FVF +G++NGSTL+++G+
Sbjct: 220 MVRVMDDWLTEGPEGTSKMLGRAQGIYVSASQEKFQLLMATTFVFESGKYNGSTLAMVGK 399
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N V+ VREM I+GGSG FR ARGY AHT +G VV+Y V V
Sbjct: 400 NAVVEQVREMPILGGSGLFRFARGYALAHTHSIDLKTGNAVVEYNVTV 543
>gb|DR177549.1|DR177549 RTMNUT1_6_A10.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_6_A10_A029 3', mRNA sequence
Length = 683
Score = 115 bits (246), Expect = 3e-025
Identities = 53/108 (49%), Positives = 65/108 (60%)
Frame = -2 / +1
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +GRAQG Y A Q+ F LLM FVF +G +NGSTL+++G+
Sbjct: 232 MVRVMDDWLTEGPEGTSKMLGRAQGIYVSACQEKFQLLMATTFVFESGRYNGSTLAMVGK 411
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N VL VREM IVGGSG FR ARGY AHT +G VV+Y V V
Sbjct: 412 NAVLEQVREMPIVGGSGFFRFARGYALAHTHSIDFKTGNAVVEYNVTV 555
>gb|BX250265.1|BX250265 BX250265 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP034E03 similar to DISEASE RESISTANCE
RESPONSE PROTEIN 206, mRNA sequence
Length = 710
Score = 114 bits (243), Expect = 8e-025
Identities = 51/108 (47%), Positives = 67/108 (62%)
Frame = -2 / +3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM F+F +G++NGSTL+++G+
Sbjct: 195 LVRVMDDPLTEEPKATSKMVGRAQGIYVSSCQHRVQLLMATTFIFESGKYNGSTLAMVGK 374
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N V DVREM I+GGSG FR+ARGY A T T+G VV+Y V V
Sbjct: 375 NAVFDDVREMPILGGSGLFRLARGYALARTHSLDLTTGNAVVEYDVTV 518
>gb|BX250817.1|BX250817 BX250817 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP041F11 similar to DISEASE RESISTANCE
RESPONSE PROTEIN 206, mRNA sequence
Length = 660
Score = 114 bits (243), Expect = 8e-025
Identities = 51/108 (47%), Positives = 67/108 (62%)
Frame = -2 / +2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM F+F +G++NGSTL+++G+
Sbjct: 248 LVRVMDDPLTEEPKATSKMVGRAQGIYVSSCQHRVQLLMATTFIFESGKYNGSTLAMVGK 427
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N V DVREM I+GGSG FR+ARGY A T T+G VV+Y V V
Sbjct: 428 NAVFDDVREMPILGGSGLFRLARGYALARTHSLDLTTGNAVVEYDVTV 571
>gb|CF386401.1|CF386401 RTDR1_14_G10.b1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_14_G10_A015 3', mRNA
sequence
Length = 597
Score = 113 bits (242), Expect = 1e-024
Identities = 52/107 (48%), Positives = 64/107 (59%)
Frame = -2 / -1
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V + D T A VGRAQG Y + Q+ F LLM FVF +G++NGSTL+++G+N
Sbjct: 369 VMVMDDWLTEGPEATSKMVGRAQGIYVSSSQEDFHLLMATTFVFESGKYNGSTLAMIGKN 190
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
L VREM IVGGSG FR ARGY A T +G VV+Y V V
Sbjct: 189 AALEQVREMPIVGGSGLFRFARGYALARTHAFELNTGNAVVEYNVTV 49
>gb|CF669964.1|CF669964 RTCNT1_47_E08.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_47_E08_A029 3', mRNA sequence
Length = 524
Score = 113 bits (242), Expect = 1e-024
Identities = 52/107 (48%), Positives = 64/107 (59%)
Frame = -2 / +3
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V + D T A VGRAQG Y + Q+ F LLM FVF +G++NGSTL+++G+N
Sbjct: 6 VMVMDDWLTEGPEATSKMVGRAQGIYVSSSQEDFHLLMATTFVFESGKYNGSTLAMIGKN 185
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
L VREM IVGGSG FR ARGY A T +G VV+Y V V
Sbjct: 186 AALEQVREMPIVGGSGLFRFARGYALARTHAFELNTGNAVVEYNVTV 326
>gb|BX679702.1|BX679702 BX679702 RS Pinus pinaster cDNA clone RS31G06, mRNA sequence
Length = 496
Score = 113 bits (242), Expect = 1e-024
Identities = 52/107 (48%), Positives = 64/107 (59%)
Frame = -2 / +2
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V + D T A VGRAQG Y + Q+ F LLM FVF +G++NGSTL+++G+N
Sbjct: 59 VMVMDDWLTEGPEATSKMVGRAQGIYVSSSQEDFHLLMATTFVFESGKYNGSTLAMIGKN 238
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
L VREM IVGGSG FR ARGY A T +G VV+Y V V
Sbjct: 239 AALEQVREMPIVGGSGLFRFARGYALARTHAFELNTGNAVVEYNVTV 379
>gb|DR021229.1|DR021229 STRS1_43_F05.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_43_F05_A034 3', mRNA sequence
Length = 616
Score = 113 bits (242), Expect = 1e-024
Identities = 52/107 (48%), Positives = 64/107 (59%)
Frame = -2 / +3
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V + D T A VGRAQG Y + Q+ F LLM FVF +G++NGSTL+++G+N
Sbjct: 168 VMVMDDWLTEGPEATSKMVGRAQGIYVSSSQEDFHLLMATTFVFESGKYNGSTLAMIGKN 347
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
L VREM IVGGSG FR ARGY A T +G VV+Y V V
Sbjct: 348 AALEQVREMPIVGGSGLFRFARGYALARTHAFELNTGNAVVEYNVTV 488
>gb|DR021309.1|DR021309 STRS1_43_F05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_43_F05_A034 5', mRNA sequence
Length = 543
Score = 113 bits (242), Expect = 1e-024
Identities = 52/107 (48%), Positives = 64/107 (59%)
Frame = -2 / +2
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V + D T A VGRAQG Y + Q+ F LLM FVF +G++NGSTL+++G+N
Sbjct: 131 VMVMDDWLTEGPEATSKMVGRAQGIYVSSSQEDFHLLMATTFVFESGKYNGSTLAMIGKN 310
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
L VREM IVGGSG FR ARGY A T +G VV+Y V V
Sbjct: 311 AALEQVREMPIVGGSGLFRFARGYALARTHAFELNTGNAVVEYNVTV 451
>gb|DR051229.1|DR051229 RTBOR1_28_C05.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_28_C05_A029 5', mRNA sequence
Length = 797
Score = 113 bits (242), Expect = 1e-024
Identities = 52/107 (48%), Positives = 64/107 (59%)
Frame = -2 / +3
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V + D T A VGRAQG Y + Q+ F LLM FVF +G++NGSTL+++G+N
Sbjct: 252 VMVMDDWLTEGPEATSKMVGRAQGIYVSSSQEDFHLLMATTFVFESGKYNGSTLAMIGKN 431
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
L VREM IVGGSG FR ARGY A T +G VV+Y V V
Sbjct: 432 AALEQVREMPIVGGSGLFRFARGYALARTHAFELNTGNAVVEYNVTV 572
>gb|DR091221.1|DR091221 RTAL1_20_D08.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_20_D08_A029 3', mRNA sequence
Length = 659
Score = 113 bits (242), Expect = 1e-024
Identities = 52/107 (48%), Positives = 64/107 (59%)
Frame = -2 / +1
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V + D T A VGRAQG Y + Q+ F LLM FVF +G++NGSTL+++G+N
Sbjct: 154 VMVMDDWLTEGPEATSKMVGRAQGIYVSSSQEDFHLLMATTFVFESGKYNGSTLAMIGKN 333
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
L VREM IVGGSG FR ARGY A T +G VV+Y V V
Sbjct: 334 AALEQVREMPIVGGSGLFRFARGYALARTHAFELNTGNAVVEYNVTV 474
>gb|DR091294.1|DR091294 RTAL1_20_D08.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_20_D08_A029 5', mRNA sequence
Length = 691
Score = 113 bits (242), Expect = 1e-024
Identities = 52/107 (48%), Positives = 64/107 (59%)
Frame = -2 / +2
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V + D T A VGRAQG Y + Q+ F LLM FVF +G++NGSTL+++G+N
Sbjct: 266 VMVMDDWLTEGPEATSKMVGRAQGIYVSSSQEDFHLLMATTFVFESGKYNGSTLAMIGKN 445
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
L VREM IVGGSG FR ARGY A T +G VV+Y V V
Sbjct: 446 AALEQVREMPIVGGSGLFRFARGYALARTHAFELNTGNAVVEYNVTV 586
>gb|DR097369.1|DR097369 STRR1_34_F04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_34_F04_A033 3', mRNA sequence
Length = 734
Score = 113 bits (242), Expect = 1e-024
Identities = 52/107 (48%), Positives = 64/107 (59%)
Frame = -2 / +2
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V + D T A VGRAQG Y + Q+ F LLM FVF +G++NGSTL+++G+N
Sbjct: 224 VMVMDDWLTEGPEATSKMVGRAQGIYVSSSQEDFHLLMATTFVFESGKYNGSTLAMIGKN 403
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
L VREM IVGGSG FR ARGY A T +G VV+Y V V
Sbjct: 404 AALEQVREMPIVGGSGLFRFARGYALARTHAFELNTGNAVVEYNVTV 544
>gb|DR178641.1|DR178641 RTMNUT1_13_B11.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_13_B11_A029 3', mRNA sequence
Length = 673
Score = 113 bits (242), Expect = 1e-024
Identities = 52/107 (48%), Positives = 64/107 (59%)
Frame = -2 / +3
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V + D T A VGRAQG Y + Q+ F LLM FVF +G++NGSTL+++G+N
Sbjct: 168 VMVMDDWLTEGPEATSKMVGRAQGIYVSSSQEDFHLLMATTFVFESGKYNGSTLAMIGKN 347
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
L VREM IVGGSG FR ARGY A T +G VV+Y V V
Sbjct: 348 AALEQVREMPIVGGSGLFRFARGYALARTHAFELNTGNAVVEYNVTV 488
>gb|DR178714.1|DR178714 RTMNUT1_13_B11.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_13_B11_A029 5', mRNA sequence
Length = 627
Score = 113 bits (242), Expect = 1e-024
Identities = 52/107 (48%), Positives = 64/107 (59%)
Frame = -2 / +2
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V + D T A VGRAQG Y + Q+ F LLM FVF +G++NGSTL+++G+N
Sbjct: 131 VMVMDDWLTEGPEATSKMVGRAQGIYVSSSQEDFHLLMATTFVFESGKYNGSTLAMIGKN 310
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
L VREM IVGGSG FR ARGY A T +G VV+Y V V
Sbjct: 311 AALEQVREMPIVGGSGLFRFARGYALARTHAFELNTGNAVVEYNVTV 451
>gb|DR744523.1|DR744523 RTCU1_23_B12.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_23_B12_A029 3', mRNA sequence
Length = 750
Score = 113 bits (242), Expect = 1e-024
Identities = 52/107 (48%), Positives = 64/107 (59%)
Frame = -2 / +1
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V + D T A VGRAQG Y + Q+ F LLM FVF +G++NGSTL+++G+N
Sbjct: 154 VMVMDDWLTEGPEATSKMVGRAQGIYVSSSQEDFHLLMATTFVFESGKYNGSTLAMIGKN 333
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
L VREM IVGGSG FR ARGY A T +G VV+Y V V
Sbjct: 334 AALEQVREMPIVGGSGLFRFARGYALARTHAFELNTGNAVVEYNVTV 474
>gb|CO197274.1|CO197274 GEO1_5_D02.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_5_D02_A029 3', mRNA sequence
Length = 774
Score = 113 bits (241), Expect = 2e-024
Identities = 50/108 (46%), Positives = 65/108 (60%)
Frame = -2 / -2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
++ + D T + VG+AQG Y Q+ LLM FVF +G++NGSTL ++G+
Sbjct: 530 MLVVMDDSLTETPELSSKLVGKAQGIYVGCSQENLHLLMATTFVFESGKYNGSTLVMVGK 351
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N V +VREM IVGGSG FR ARGY AHT T+G VV+Y V V
Sbjct: 350 NAVFDEVREMPIVGGSGLFRFARGYALAHTHSFDLTTGNAVVEYNVTV 207
>gb|BX252998.1|BX252998 BX252998 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP076C08 similar to DISEASE RESISTANCE
RESPONSE PROTEIN 206, mRNA sequence
Length = 535
Score = 112 bits (240), Expect = 2e-024
Identities = 52/108 (48%), Positives = 64/108 (59%)
Frame = -2 / +2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +GRAQG Y A Q+ F LLM FVF G++NGSTL+++G+
Sbjct: 62 MVRVMDDWLTKGPEGTSKMLGRAQGIYVSACQEKFHLLMATTFVFECGKYNGSTLAMVGK 241
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N VL VREM IVGGSG FR ARGY A T +G VV+Y V V
Sbjct: 242 NAVLDQVREMPIVGGSGLFRFARGYALARTHSIDIKTGNAVVEYNVTV 385
>gb|BX253009.1|BX253009 BX253009 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP076E08 similar to DISEASE RESISTANCE
RESPONSE PROTEIN 206, mRNA sequence
Length = 535
Score = 112 bits (240), Expect = 2e-024
Identities = 52/108 (48%), Positives = 64/108 (59%)
Frame = -2 / +2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +GRAQG Y A Q+ F LLM FVF G++NGSTL+++G+
Sbjct: 62 MVRVMDDWLTKGPEGTSKMLGRAQGIYVSACQEKFHLLMATTFVFECGKYNGSTLAMVGK 241
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N VL VREM IVGGSG FR ARGY A T +G VV+Y V V
Sbjct: 242 NAVLDQVREMPIVGGSGLFRFARGYALARTHSIDIKTGNAVVEYNVTV 385
>gb|BM367007.1|BM367007 NXLV_043_D05_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_043_D05 5' similar to Arabidopsis thaliana
sequence At1g58170 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 552
Score = 112 bits (239), Expect = 3e-024
Identities = 51/110 (46%), Positives = 65/110 (59%)
Frame = -2 / +1
Query: 598 GAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSIL 419
G V + D T A VGRA+G Y + Q+ F LLM FVF +G++NGSTL+++
Sbjct: 16 GGAVMVMDDWLTEGPEATSKMVGRARGIYVSSSQEDFHLLMATTFVFESGKYNGSTLAMI 195
Query: 418 GRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
G+N L VREM IVGGSG FR ARG+ A T +G VV+Y V V
Sbjct: 196 GKNAALEQVREMPIVGGSGLFRFARGHALARTHAFELNTGNAVVEYNVTV 345
>gb|DR177548.1|DR177548 RTMNUT1_6_A09.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_6_A09_A029 3', mRNA sequence
Length = 667
Score = 112 bits (239), Expect = 3e-024
Identities = 52/108 (48%), Positives = 64/108 (59%)
Frame = -2 / +3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +GRAQG Y A Q+ F LLM FVF +G +NGSTL+++G+
Sbjct: 216 MVRVMDDWLTEGPEGTSKMLGRAQGIYVSACQEKFQLLMATTFVFESGRYNGSTLAMVGK 395
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N VL VREM IVGGSG FR A GY AHT +G VV+Y V V
Sbjct: 396 NAVLEQVREMPIVGGSGFFRFAGGYALAHTHSIDFKTGNAVVEYNVTV 539
>gb|DR071426.1|DR071426 RTDK1_19_F12.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_F12_A029 5', mRNA sequence
Length = 706
Score = 111 bits (238), Expect = 4e-024
Identities = 49/108 (45%), Positives = 67/108 (62%)
Frame = -2 / -2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM + FVF +G++NGSTL+++G+
Sbjct: 567 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMAITFVFESGKYNGSTLAMVGK 388
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 387 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 244
>gb|DR161766.1|DR161766 RTFE1_13_F12.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_13_F12_A029 5', mRNA sequence
Length = 614
Score = 111 bits (238), Expect = 4e-024
Identities = 49/108 (45%), Positives = 67/108 (62%)
Frame = -2 / +2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM + FVF +G++NGSTL+++G+
Sbjct: 221 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMAITFVFESGKYNGSTLAMVGK 400
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 401 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 544
>gb|DR165873.1|DR165873 RTPHOS1_7_H02.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_7_H02_A029 5', mRNA sequence
Length = 727
Score = 111 bits (238), Expect = 4e-024
Identities = 50/108 (46%), Positives = 66/108 (61%)
Frame = -2 / +3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 234 LVRVMDDRLTKGPKATSKMVGRAQGIYVSSCQHRLQLLMATTFVFESGKYNGSTLAMVGK 413
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N V +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 414 NAVFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 557
>gb|BX678872.1|BX678872 BX678872 RS Pinus pinaster cDNA clone RS16C10, mRNA sequence
Length = 567
Score = 111 bits (237), Expect = 5e-024
Identities = 50/108 (46%), Positives = 66/108 (61%)
Frame = -2 / +2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 227 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 406
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N V +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 407 NAVFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 550
>gb|BX680364.1|BX680364 BX680364 RS Pinus pinaster cDNA clone RS42E02, mRNA sequence
Length = 616
Score = 111 bits (237), Expect = 5e-024
Identities = 50/105 (47%), Positives = 63/105 (60%)
Frame = -2 / +1
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V + D T A VGRAQG Y + Q+ F LLM FVF +G++NGSTL+++G+N
Sbjct: 208 VVVMDDCLTEGPEATSKLVGRAQGIYVSSGQEDFHLLMATTFVFESGKYNGSTLAMIGKN 387
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTV 275
L +VREM IVGGSG FR+ARGY AHT T+ TV
Sbjct: 388 AALEEVREMPIVGGSGLFRLARGYALAHTHSIDGTTAVVKYNVTV 522
>gb|DR021245.1|DR021245 STRS1_43_G12.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_43_G12_A034 3', mRNA sequence
Length = 688
Score = 111 bits (237), Expect = 5e-024
Identities = 50/108 (46%), Positives = 66/108 (61%)
Frame = -2 / -1
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM F+F +G++NGSTL+++G+
Sbjct: 415 LVRVMDDPLTEEPKATSKMVGRAQGIYVSSCQHRVQLLMATTFIFESGKYNGSTLAMVGK 236
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N V DVREM I+GGSG FR+ARGY A T +G VV+Y V V
Sbjct: 235 NAVFDDVREMPILGGSGLFRLARGYALARTHSFDLKTGNAVVEYDVTV 92
>gb|CF390756.1|CF390756 RTDR2_17_G06.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_17_G06_A021 5', mRNA
sequence
Length = 669
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / +2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 218 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 397
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 398 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 541
>gb|CF402368.1|CF402368 RTWW1_17_G04.b1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_17_G04_A015 3', mRNA sequence
Length = 621
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / +2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 11 LVRVMDDRLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 190
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 191 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 334
>gb|CF402464.1|CF402464 RTWW1_17_G04.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_17_G04_A015 5', mRNA sequence
Length = 647
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / +3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 306 LVRVMDDRLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 485
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 486 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 629
>gb|CO363853.1|CO363853 RTK1_12_E10.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_12_E10_A029 3', mRNA sequence
Length = 879
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / -3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 640 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 461
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 460 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 317
>gb|CO363861.1|CO363861 RTK1_12_F10.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_12_F10_A029 3', mRNA sequence
Length = 871
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / -3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 632 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 453
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 452 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 309
>gb|CO363943.1|CO363943 RTK1_12_E10.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_12_E10_A029 5', mRNA sequence
Length = 836
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / -2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 667 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 488
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 487 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 344
>gb|CO363955.1|CO363955 RTK1_12_F10.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_12_F10_A029 5', mRNA sequence
Length = 774
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / -3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 658 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 479
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 478 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 335
>gb|CO366205.1|CO366205 RTK1_26_B05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_26_B05_A029 5', mRNA sequence
Length = 903
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / +3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 228 LVRVMDDRLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 407
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 408 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 551
>gb|CX646099.1|CX646099 COLD1_7_G03.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_7_G03_A029 3', mRNA sequence
Length = 712
Score = 111 bits (236), Expect = 7e-024
Identities = 51/108 (47%), Positives = 65/108 (60%)
Frame = -2 / +1
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
++ + D T A VGRAQG Y + QQ LLM FVF +G++NGSTL+++G+
Sbjct: 142 LMRVMDDWLTEGPEATSKIVGRAQGIYVSSCQQKVQLLMTTTFVFESGKYNGSTLAMVGK 321
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N V VREM IVGGSG FR+ARGY A T +G VV+Y V V
Sbjct: 322 NSVFDQVREMPIVGGSGLFRLARGYALARTHSFDLKTGNAVVEYNVTV 465
>gb|CX646184.1|CX646184 COLD1_7_G03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_7_G03_A029 5', mRNA sequence
Length = 736
Score = 111 bits (236), Expect = 7e-024
Identities = 51/108 (47%), Positives = 65/108 (60%)
Frame = -2 / +1
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
++ + D T A VGRAQG Y + QQ LLM FVF +G++NGSTL+++G+
Sbjct: 298 LMRVMDDWLTEGPEATSKIVGRAQGIYVSSCQQKVQLLMTTTFVFESGKYNGSTLAMVGK 477
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N V VREM IVGGSG FR+ARGY A T +G VV+Y V V
Sbjct: 478 NSVFDQVREMPIVGGSGLFRLARGYALARTHSFDLKTGNAVVEYNVTV 621
>gb|CX649870.1|CX649870 COLD1_42_B02.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_42_B02_A029 3', mRNA sequence
Length = 837
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / +3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 111 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 290
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 291 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 434
>gb|CX649939.1|CX649939 COLD1_42_B02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_42_B02_A029 5', mRNA sequence
Length = 888
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / +2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 248 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 427
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 428 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 571
>gb|DR019595.1|DR019595 STRS1_31_D04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_D04_A034 3', mRNA sequence
Length = 822
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / +3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 84 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 263
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 264 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 407
>gb|DR019669.1|DR019669 STRS1_31_D04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_D04_A034 5', mRNA sequence
Length = 735
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / +1
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 208 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 387
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 388 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 531
>gb|DR024390.1|DR024390 STRS1_64_D10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_64_D10_A034 5', mRNA sequence
Length = 840
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / +2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 230 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 409
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 410 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 553
>gb|DR102370.1|DR102370 STRR1_80_D02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_80_D02_A033 5', mRNA sequence
Length = 691
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / +2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 209 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 388
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 389 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 532
>gb|DR113082.1|DR113082 RTS1_32_H03.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_32_H03_A029 5', mRNA sequence
Length = 598
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / +2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 191 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 370
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 371 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 514
>gb|DR179873.1|DR179873 RTMNUT1_25_C03.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_25_C03_A029 3', mRNA sequence
Length = 879
Score = 111 bits (236), Expect = 7e-024
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = -2 / +3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+V + D T +A VGRAQG Y + Q LLM FVF +G++NGSTL+++G+
Sbjct: 270 LVRVMDDWLTKGPKATSKMVGRAQGIYVSSCQHRVQLLMATTFVFESGKYNGSTLAMVGK 449
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + +VREM IVGGSG FR+ARGY A T +G +V+Y V V
Sbjct: 450 NAIFDEVREMPIVGGSGFFRLARGYALARTHSFDLNTGNAIVEYNVTV 593
>gb|DR078507.1|DR078507 RTFEPL1_5_D06.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_5_D06_A029 3', mRNA sequence
Length = 779
Score = 110 bits (235), Expect = 1e-023
Identities = 50/105 (47%), Positives = 62/105 (59%)
Frame = -2 / +3
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V + D T A VGRAQG Y + Q+ F LLM FVF +G++NGSTL+++G+N
Sbjct: 222 VVVMDDCLTAGPEATSKLVGRAQGIYVSSGQEDFHLLMATTFVFESGKYNGSTLAMIGKN 401
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTV 275
L +VREM IVGGSG FR ARGY AHT T+ TV
Sbjct: 402 APLEEVREMPIVGGSGLFRFARGYALAHTHSIDGTTAVVKYNVTV 536
>gb|DR078583.1|DR078583 RTFEPL1_5_D06.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_5_D06_A029 5', mRNA sequence
Length = 822
Score = 110 bits (235), Expect = 1e-023
Identities = 50/105 (47%), Positives = 62/105 (59%)
Frame = -2 / +2
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V + D T A VGRAQG Y + Q+ F LLM FVF +G++NGSTL+++G+N
Sbjct: 248 VVVMDDCLTAGPEATSKLVGRAQGIYVSSGQEDFHLLMATTFVFESGKYNGSTLAMIGKN 427
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTV 275
L +VREM IVGGSG FR ARGY AHT T+ TV
Sbjct: 428 APLEEVREMPIVGGSGLFRFARGYALAHTHSIDGTTAVVKYNVTV 562
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 249,288,975
Number of Sequences: 355925
Number of extensions: 3062869
Number of successful extensions: 62737
Number of sequences better than 1.0e-020: 78
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 9866929035
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)