TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3276111.2.1
(1393 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO199449.1|CO199449 GEO2_1_F10.b1_A032 Root gravitropism... 67 3e-050
gb|DR012887.1|DR012887 HEAT1_15_D05.g1_A029 Root at 37 C fo... 67 2e-049
gb|DR070649.1|DR070649 RTDK1_14_F01.g1_A029 Roots, dark Pin... 68 1e-048
gb|CF398991.1|CF398991 RTDS3_11_H09.g1_A022 Drought-stresse... 68 1e-048
gb|CF668985.1|CF668985 RTCNT1_39_G12.g1_A029 Root control P... 68 1e-048
gb|DR687672.1|DR687672 EST1077754 Normalized pine embryo li... 67 6e-048
gb|DT634371.1|DT634371 EST1149302 Normalized pine embryo li... 67 6e-048
gb|DR022576.1|DR022576 STRS1_52_B04.b1_A034 Shoot tip pitch... 100 2e-047
gb|DR179208.1|DR179208 RTMNUT1_16_E04.g1_A029 Roots minus m... 100 3e-047
gb|CX716008.1|CX716008 RTPQ1_39_C01.g1_A032 Roots treated w... 68 1e-045
gb|CF393744.1|CF393744 RTDS2_1_F11.b1_A021 Drought-stressed... 68 1e-044
gb|CF393377.1|CF393377 RTDR3_20_F10.g1_A022 Loblolly pine r... 68 1e-044
gb|DR019198.1|DR019198 STRS1_28_A04.g1_A034 Shoot tip pitch... 94 6e-044
gb|DR179132.1|DR179132 RTMNUT1_16_E04.b1_A029 Roots minus m... 100 1e-042
gb|CX650902.1|CX650902 COLD1_48_G09.g1_A029 Root cold Pinus... 61 1e-042
gb|CF394277.1|CF394277 RTDS2_4_A02.g1_A021 Drought-stressed... 68 1e-041
gb|DR180554.1|DR180554 RTMNUT1_33_H11.b1_A029 Roots minus m... 67 3e-041
gb|CV031915.1|CV031915 RTNACL1_4_C06.g1_A029 Roots plus add... 67 2e-040
gb|CO164051.1|CO164051 FLD1_45_B05.g1_A029 Root flooded Pin... 68 9e-040
gb|CX714408.1|CX714408 RTPQ1_22_A12.b1_A032 Roots treated w... 94 1e-039
gb|CX652206.1|CX652206 COLD1_57_D09.g1_A029 Root cold Pinus... 68 2e-038
gb|DR011623.1|DR011623 HEAT1_6_H03.g1_A029 Root at 37 C for... 61 5e-038
gb|CO200926.1|CO200926 RTCNT2_2_B04.g1_A029 Root control 2 ... 68 7e-037
gb|DR022645.1|DR022645 STRS1_52_B04.g1_A034 Shoot tip pitch... 100 1e-036
gb|CF398001.1|CF398001 RTDS3_22_F03.b1_A022 Drought-stresse... 53 2e-035
gb|CF393742.1|CF393742 RTDS2_1_G06.b1_A021 Drought-stressed... 68 2e-035
gb|CO167267.1|CO167267 FLD1_67_H10.g1_A029 Root flooded Pin... 61 3e-035
gb|DR094013.1|DR094013 STRR1_11_H02.g1_A033 Stem Response R... 67 5e-035
gb|DR102486.1|DR102486 STRR1_81_B04.g1_A033 Stem Response R... 61 7e-035
gb|CF666059.1|CF666059 RTCNT1_20_A03.g1_A029 Root control P... 68 2e-034
gb|DR014140.1|DR014140 HEAT1_23_D09.g1_A029 Root at 37 C fo... 67 4e-034
gb|DN445836.1|DN445836 EST941635 Sequencing ESTs from loblo... 68 6e-034
gb|DN448237.1|DN448237 EST944036 Sequencing ESTs from loblo... 68 6e-034
gb|DR178680.1|DR178680 RTMNUT1_13_G02.b1_A029 Roots minus m... 68 6e-034
gb|CV035910.1|CV035910 RTNACL1_43_G04.b1_A029 Roots plus ad... 68 6e-034
gb|DR181072.1|DR181072 RTMNUT1_36_D01.g1_A029 Roots minus m... 68 7e-034
gb|CO165160.1|CO165160 FLD1_52_F08.g1_A029 Root flooded Pin... 68 2e-033
gb|CF401560.1|CF401560 RTWW1_13_C07.g1_A015 Well-watered lo... 104 2e-033
gb|DR070631.1|DR070631 RTDK1_14_D03.g1_A029 Roots, dark Pin... 67 4e-033
gb|DR177967.1|DR177967 RTMNUT1_8_A12.g1_A029 Roots minus mi... 68 6e-033
gb|CF389090.1|CF389090 RTDR2_13_E01.g1_A021 Loblolly pine r... 96 1e-032
gb|CO176188.1|CO176188 NDL1_60_H07.b1_A029 Needles control ... 96 2e-032
gb|CO163261.1|CO163261 FLD1_40_B02.g1_A029 Root flooded Pin... 96 2e-032
gb|CO167710.1|CO167710 FLD1_70_E03.g1_A029 Root flooded Pin... 68 4e-032
gb|BX682795.1|BX682795 BX682795 Pinus pinaster differenciat... 71 5e-032
gb|CF391882.1|CF391882 RTDR3_10_B12.g1_A022 Loblolly pine r... 94 8e-032
gb|BG039980.1|BG039980 NXSI_104_C09_F NXSI (Nsf Xylem Side ... 65 9e-032
gb|DR693562.1|DR693562 EST1083651 Normalized pine embryo li... 61 1e-031
gb|DN462584.1|DN462584 EST958383 Sequencing ESTs from loblo... 61 1e-031
gb|CF402592.1|CF402592 RTWW1_21_C08.g1_A015 Well-watered lo... 104 1e-031
gb|CF386025.1|CF386025 RTDR1_7_H02.g1_A015 Loblolly pine ro... 104 1e-031
gb|CF394599.1|CF394599 RTDS2_6_A01.g1_A021 Drought-stressed... 104 1e-031
gb|DR059551.1|DR059551 RTNIT1_18_G11.b1_A029 Roots minus ni... 67 1e-031
gb|CO160854.1|CO160854 FLD1_25_C05.b1_A029 Root flooded Pin... 67 1e-031
gb|DR089903.1|DR089903 RTAL1_11_B09.g1_A029 Roots plus adde... 67 1e-031
gb|CF395283.1|CF395283 RTDS2_10_C06.g1_A021 Drought-stresse... 101 7e-031
gb|DR069440.1|DR069440 RTDK1_7_F12.b1_A029 Roots, dark Pinu... 60 7e-031
gb|BG040056.1|BG040056 NXSI_106_A01_F NXSI (Nsf Xylem Side ... 67 3e-030
gb|CO363972.1|CO363972 RTK1_12_H04.g1_A029 Roots minus pota... 90 3e-030
gb|DR022528.1|DR022528 STRS1_51_E12.g1_A034 Shoot tip pitch... 99 4e-030
gb|BX251939.1|BX251939 BX251939 Pinus pinaster differenciat... 99 4e-030
gb|DR069530.1|DR069530 RTDK1_7_F12.g1_A029 Roots, dark Pinu... 73 4e-030
gb|DR117786.1|DR117786 RTMG1_9_E04.b1_A029 Roots minus magn... 62 5e-030
gb|BX682770.1|BX682770 BX682770 Pinus pinaster differenciat... 62 2e-029
gb|CF395195.1|CF395195 RTDS2_10_C06.b1_A021 Drought-stresse... 55 4e-029
gb|BI643863.1|BI643863 NXPV_123_H11_F NXPV (Nsf Xylem Plani... 68 6e-029
gb|CX652372.1|CX652372 COLD1_58_D08.g1_A029 Root cold Pinus... 68 8e-029
gb|DR117863.1|DR117863 RTMG1_9_E04.g1_A029 Roots minus magn... 97 1e-028
gb|DR090763.1|DR090763 RTAL1_17_E09.b1_A029 Roots plus adde... 62 2e-028
gb|CO161815.1|CO161815 FLD1_31_G10.b1_A029 Root flooded Pin... 62 2e-028
gb|DN459373.1|DN459373 EST955172 Sequencing ESTs from loblo... 68 4e-028
gb|CF402626.1|CF402626 RTWW1_21_D01.g1_A015 Well-watered lo... 61 7e-028
gb|CO165167.1|CO165167 FLD1_52_G05.g1_A029 Root flooded Pin... 61 9e-028
gb|CF392425.1|CF392425 RTDR3_7_B09.g1_A022 Loblolly pine ro... 61 9e-028
gb|CV034796.1|CV034796 RTNACL1_11_D10.g1_A029 Roots plus ad... 96 9e-028
gb|CF391723.1|CF391723 RTDR3_11_H08.g1_A022 Loblolly pine r... 96 1e-027
gb|DR692851.1|DR692851 EST1082939 Normalized pine embryo li... 62 1e-027
gb|CO163181.1|CO163181 FLD1_40_B02.b1_A029 Root flooded Pin... 96 1e-027
gb|CO198589.1|CO198589 GEO1_14_H05.g1_A029 Root gravitropis... 60 1e-027
gb|CF400007.1|CF400007 RTWW1_2_H04.g1_A015 Well-watered lob... 62 3e-027
gb|CO201395.1|CO201395 RTCNT2_5_B04.g1_A029 Root control 2 ... 60 3e-027
gb|CF475200.1|CF475200 RTWW2_14_B11.g1_A021 Well-watered lo... 95 5e-027
gb|CF392022.1|CF392022 RTDR3_12_H09.g1_A022 Loblolly pine r... 61 6e-027
gb|BX251512.1|BX251512 BX251512 Pinus pinaster differenciat... 87 1e-026
gb|DR020602.1|DR020602 STRS1_38_C09.b1_A034 Shoot tip pitch... 62 1e-026
gb|DR167978.1|DR167978 RTPHOS1_22_A01.g1_A029 Roots minus p... 94 1e-026
gb|DR110730.1|DR110730 RTS1_12_C12.g1_A029 Roots minus sulf... 87 2e-026
gb|BM492188.1|BM492188 NXRV_022_A04_F NXRV (Nsf Xylem Root ... 93 2e-026
gb|CO175004.1|CO175004 NDL1_47_E08.g1_A029 Needles control ... 87 3e-026
gb|BX249419.1|BX249419 BX249419 Pinus pinaster differenciat... 85 5e-026
gb|AW497816.1|AW497816 PC02F02 Pine TriplEx pollen cone lib... 100 6e-026
gb|CO162221.1|CO162221 FLD1_34_A09.b1_A029 Root flooded Pin... 52 6e-026
gb|CO363878.1|CO363878 RTK1_12_H04.b1_A029 Roots minus pota... 90 6e-026
gb|DT624915.1|DT624915 EST1159190 Sequencing ESTs from lobl... 61 7e-026
gb|CV143704.1|CV143704 EST854913 Sequencing ESTs from loblo... 61 7e-026
gb|AW497835.1|AW497835 PC02G12 Pine TriplEx pollen cone lib... 100 8e-026
gb|DR025478.1|DR025478 STRS1_71_G10.g1_A034 Shoot tip pitch... 62 9e-026
gb|CO199661.1|CO199661 GEO2_2_E07.g1_A032 Root gravitropism... 62 1e-025
gb|DR098447.1|DR098447 STRR1_45_C05.g1_A033 Stem Response R... 62 1e-025
gb|DR071907.1|DR071907 RTDK1_22_G09.g1_A029 Roots, dark Pin... 67 1e-025
gb|DR179629.1|DR179629 RTMNUT1_23_G07.b2_A029 Roots minus m... 67 1e-025
gb|DR068913.1|DR068913 RTDK1_3_D07.g1_A029 Roots, dark Pinu... 67 1e-025
gb|CF671073.1|CF671073 RTCNT1_54_B11.g1_A029 Root control P... 67 1e-025
gb|CF477408.1|CF477408 RTWW3_7_H05.g1_A022 Well-watered lob... 62 1e-025
gb|CF400992.1|CF400992 RTWW1_9_E03.g1_A015 Well-watered lob... 62 1e-025
gb|CF385582.1|CF385582 RTDR1_4_D05.g1_A015 Loblolly pine ro... 62 1e-025
gb|CF386190.1|CF386190 RTDR1_8_H07.g1_A015 Loblolly pine ro... 62 1e-025
gb|CF400442.1|CF400442 RTWW1_5_G06.g1_A015 Well-watered lob... 62 1e-025
gb|DR387123.1|DR387123 RTHG1_19_D04.g1_A029 Roots plus adde... 62 1e-025
gb|CF402124.1|CF402124 RTWW1_20_E10.g1_A015 Well-watered lo... 62 1e-025
gb|CF387273.1|CF387273 RTDR1_11_C05.g1_A015 Loblolly pine r... 62 2e-025
gb|DR690196.1|DR690196 EST1080282 Normalized pine embryo li... 90 2e-025
gb|CX646721.1|CX646721 COLD1_11_C12.b1_A029 Root cold Pinus... 62 2e-025
gb|CF666473.1|CF666473 RTCNT1_23_C04.g1_A029 Root control P... 62 2e-025
gb|CF666147.1|CF666147 RTCNT1_21_D10.b1_A029 Root control P... 62 2e-025
gb|DR743851.1|DR743851 RTCU1_18_C02.g1_A029 Roots plus adde... 62 2e-025
gb|CF476316.1|CF476316 RTWW2_22_G02.g1_A021 Well-watered lo... 58 2e-025
gb|CO161892.1|CO161892 FLD1_31_G10.g1_A029 Root flooded Pin... 62 2e-025
gb|CO200532.1|CO200532 GEO2_8_B04.b1_A032 Root gravitropism... 62 2e-025
gb|CF386931.1|CF386931 RTDR1_9_F05.g1_A015 Loblolly pine ro... 62 2e-025
gb|CO159881.1|CO159881 FLD1_16_D07.g1_A029 Root flooded Pin... 62 2e-025
gb|CO167926.1|CO167926 FLD1_72_E01.b1_A029 Root flooded Pin... 62 2e-025
gb|CO162047.1|CO162047 FLD1_32_H06.g1_A029 Root flooded Pin... 62 2e-025
gb|CF399912.1|CF399912 RTWW1_1_H09.g1_A015 Well-watered lob... 62 2e-025
gb|DR164133.1|DR164133 RTFE1_47_B07.b1_A029 Roots minus iro... 62 2e-025
gb|DR018814.1|DR018814 STRS1_25_H01.g1_A034 Shoot tip pitch... 62 2e-025
gb|DR116890.1|DR116890 RTMG1_3_A03.g1_A029 Roots minus magn... 62 2e-025
gb|AW010403.1|AW010403 ST06D07 Pine TriplEx shoot tip libra... 68 3e-025
gb|CO366886.1|CO366886 RTK1_30_F07.g1_A029 Roots minus pota... 64 3e-025
gb|DR160377.1|DR160377 RTFE1_5_D06.g1_A029 Roots minus iron... 62 4e-025
gb|CF401427.1|CF401427 RTWW1_12_H02.g1_A015 Well-watered lo... 62 5e-025
gb|CF473877.1|CF473877 RTWW2_19_D05.g1_A021 Well-watered lo... 61 6e-025
gb|DR118827.1|DR118827 RTMG1_19_A05.g1_A029 Roots minus mag... 66 8e-025
gb|CO361817.1|CO361817 NDL2_7_F10.b1_A029 Needles control 2... 62 9e-025
gb|CF673203.1|CF673203 RTCNT1_76_H06.g1_A029 Root control P... 62 9e-025
gb|CX648291.1|CX648291 COLD1_27_E12.g1_A029 Root cold Pinus... 73 1e-024
gb|DR094715.1|DR094715 STRR1_16_G02.b1_A033 Stem Response R... 58 1e-024
gb|DR116571.1|DR116571 RTMG1_1_H03.b1_A029 Roots minus magn... 62 3e-024
gb|CF399597.1|CF399597 RTDS3_26_H07.g1_A022 Drought-stresse... 60 5e-024
gb|CV035977.1|CV035977 RTNACL1_43_F11.g1_A029 Roots plus ad... 62 5e-024
gb|CF402590.1|CF402590 RTWW1_21_H03.g1_A015 Well-watered lo... 62 6e-024
gb|DR081315.1|DR081315 RTFEPL1_28_F11.g1_A029 Roots plus ad... 62 7e-024
gb|CV034324.1|CV034324 RTNACL1_40_D08.b1_A029 Roots plus ad... 62 1e-023
gb|DR116570.1|DR116570 RTMG1_1_H02.b1_A029 Roots minus magn... 62 1e-023
gb|DR015826.1|DR015826 STRS1_5_H03.g1_A034 Shoot tip pitch ... 50 1e-023
gb|CO164078.1|CO164078 FLD1_45_E01.g1_A029 Root flooded Pin... 60 2e-023
gb|AW042608.1|AW042608 ST23H06 Pine TriplEx shoot tip libra... 94 2e-023
gb|CO162301.1|CO162301 FLD1_34_A09.g1_A029 Root flooded Pin... 62 3e-023
gb|DR384257.1|DR384257 RTHG1_1_C08.b1_A029 Roots plus added... 62 3e-023
gb|DR161078.1|DR161078 RTFE1_9_E10.g1_A029 Roots minus iron... 62 4e-023
gb|DR109633.1|DR109633 RTS1_3_D09.g1_A029 Roots minus sulfu... 62 4e-023
gb|BX252311.1|BX252311 BX252311 Pinus pinaster differenciat... 60 4e-023
gb|DR013996.1|DR013996 HEAT1_22_F11.g1_A029 Root at 37 C fo... 50 4e-023
gb|BX249878.1|BX249878 BX249878 Pinus pinaster differenciat... 74 8e-023
gb|AA556765.1|AA556765 607 Loblolly pine NA Pinus taeda cDN... 87 8e-023
gb|CV147587.1|CV147587 EST858796 Sequencing ESTs from loblo... 62 1e-022
gb|DN448128.1|DN448128 EST943927 Sequencing ESTs from loblo... 62 1e-022
gb|DR163900.1|DR163900 RTFE1_45_D05.g1_A029 Roots minus iro... 62 1e-022
gb|CV146973.1|CV146973 EST858182 Sequencing ESTs from loblo... 62 1e-022
gb|DR014440.1|DR014440 HEAT1_49_B08.g1_A029 Root at 37 C fo... 62 1e-022
gb|CO161095.1|CO161095 FLD1_26_D04.g1_A029 Root flooded Pin... 62 1e-022
gb|CO364616.1|CO364616 RTK1_16_F08.g1_A029 Roots minus pota... 62 1e-022
gb|CO162026.1|CO162026 FLD1_32_F01.g1_A029 Root flooded Pin... 62 1e-022
gb|CO365458.1|CO365458 RTK1_17_E03.b1_A029 Roots minus pota... 62 1e-022
gb|CO367769.1|CO367769 RTK1_36_B08.g1_A029 Roots minus pota... 62 1e-022
gb|CX646797.1|CX646797 COLD1_11_C12.g1_A029 Root cold Pinus... 62 1e-022
gb|CX650094.1|CX650094 COLD1_43_B02.g1_A029 Root cold Pinus... 62 1e-022
gb|CO167190.1|CO167190 FLD1_67_A10.g1_A029 Root flooded Pin... 62 1e-022
gb|DR386901.1|DR386901 RTHG1_18_D06.b1_A029 Roots plus adde... 62 1e-022
gb|CO161591.1|CO161591 FLD1_29_H08.g1_A029 Root flooded Pin... 62 1e-022
gb|CV031822.1|CV031822 RTNACL1_3_H11.g1_A029 Roots plus add... 62 1e-022
gb|DR023065.1|DR023065 STRS1_55_F06.b1_A034 Shoot tip pitch... 62 1e-022
gb|DR164207.1|DR164207 RTFE1_47_B07.g1_A029 Roots minus iro... 62 1e-022
gb|DR179218.1|DR179218 RTMNUT1_16_F04.g1_A029 Roots minus m... 62 1e-022
gb|DR687693.1|DR687693 EST1077775 Normalized pine embryo li... 62 1e-022
gb|CO200614.1|CO200614 GEO2_8_B04.g1_A032 Root gravitropism... 62 1e-022
gb|CO366268.1|CO366268 RTK1_26_G11.g1_A029 Roots minus pota... 62 1e-022
gb|DR384336.1|DR384336 RTHG1_1_C08.g1_A029 Roots plus added... 62 1e-022
gb|CX646103.1|CX646103 COLD1_7_G07.b1_A029 Root cold Pinus ... 62 1e-022
gb|CF400470.1|CF400470 RTWW1_5_F09.g1_A015 Well-watered lob... 62 1e-022
gb|DR098132.1|DR098132 STRR1_39_G04.b1_A033 Stem Response R... 62 1e-022
gb|DR384598.1|DR384598 RTHG1_3_F11.b1_A029 Roots plus added... 62 1e-022
gb|CO160543.1|CO160543 FLD1_21_F05.g1_A029 Root flooded Pin... 62 1e-022
gb|CO159233.1|CO159233 FLD1_12_G07.b1_A029 Root flooded Pin... 62 1e-022
gb|DR050145.1|DR050145 RTBOR1_21_C06.g1_A029 Roots plus add... 62 1e-022
gb|CV031759.1|CV031759 RTNACL1_3_B11.g1_A029 Roots plus add... 62 1e-022
gb|DR384883.1|DR384883 RTHG1_5_E10.b1_A029 Roots plus added... 62 1e-022
gb|CF387269.1|CF387269 RTDR1_11_F10.g1_A015 Loblolly pine r... 62 1e-022
gb|CF402173.1|CF402173 RTWW1_20_D10.g1_A015 Well-watered lo... 62 1e-022
gb|CO363095.1|CO363095 RTK1_7_D04.g1_A029 Roots minus potas... 62 1e-022
gb|DR176858.1|DR176858 RTMNUT1_1_A07.g1_A029 Roots minus mi... 62 1e-022
gb|DR385339.1|DR385339 RTHG1_8_C09.b1_A029 Roots plus added... 62 1e-022
gb|CF386751.1|CF386751 RTDR1_16_F12.g1_A015 Loblolly pine r... 62 1e-022
gb|DT624436.1|DT624436 EST1158711 Sequencing ESTs from lobl... 62 1e-022
gb|CF387887.1|CF387887 RTDR1_18_F01.g1_A015 Loblolly pine r... 62 1e-022
gb|CF395300.1|CF395300 RTDS2_10_A10.g1_A021 Drought-stresse... 62 1e-022
gb|DR161431.1|DR161431 RTFE1_11_F05.g1_A029 Roots minus iro... 62 1e-022
gb|CO361896.1|CO361896 NDL2_7_F10.g1_A029 Needles control 2... 62 1e-022
gb|CF399876.1|CF399876 RTWW1_1_F06.g1_A015 Well-watered lob... 62 1e-022
gb|CF400875.1|CF400875 RTWW1_8_C07.g1_A015 Well-watered lob... 62 1e-022
gb|CF400761.1|CF400761 RTWW1_7_G05.g1_A015 Well-watered lob... 62 1e-022
gb|DR179193.1|DR179193 RTMNUT1_16_D01.g1_A029 Roots minus m... 62 1e-022
gb|CO175311.1|CO175311 NDL1_53_G09.g1_A029 Needles control ... 62 1e-022
gb|CF668927.1|CF668927 RTCNT1_39_B09.g1_A029 Root control P... 62 1e-022
gb|CO169248.1|CO169248 NDL1_5_E11.g1_A029 Needles control P... 62 1e-022
gb|DR388656.1|DR388656 RTHG1_29_D09.g1_A029 Roots plus adde... 62 1e-022
gb|CO367059.1|CO367059 RTK1_31_H08.g1_A029 Roots minus pota... 62 1e-022
gb|CF401876.1|CF401876 RTWW1_15_G06.g1_A015 Well-watered lo... 62 1e-022
gb|CO198482.1|CO198482 GEO1_14_B04.b1_A029 Root gravitropis... 62 1e-022
gb|DR010957.1|DR010957 HEAT1_2_H09.b1_A029 Root at 37 C for... 62 1e-022
gb|CO174493.1|CO174493 NDL1_44_H02.b1_A029 Needles control ... 62 1e-022
gb|CO368769.1|CO368769 RTK1_42_E07.g1_A029 Roots minus pota... 62 1e-022
gb|CO369899.1|CO369899 RTK1_55_B11.b1_A029 Roots minus pota... 62 1e-022
gb|CF387393.1|CF387393 RTDR1_12_A02.g1_A015 Loblolly pine r... 62 1e-022
gb|CF388941.1|CF388941 RTDR2_16_G01.g1_A021 Loblolly pine r... 62 1e-022
gb|DR061039.1|DR061039 RTNIT1_31_E02.g1_A029 Roots minus ni... 62 1e-022
gb|CF473266.1|CF473266 RTWW2_1_E11.g1_A021 Well-watered lob... 62 1e-022
gb|CF474177.1|CF474177 RTWW2_17_D01.b1_A021 Well-watered lo... 62 1e-022
gb|CO158684.1|CO158684 FLD1_8_B12.g1_A029 Root flooded Pinu... 62 1e-022
gb|CF385986.1|CF385986 RTDR1_7_G04.g1_A015 Loblolly pine ro... 62 1e-022
gb|CF399156.1|CF399156 RTDS3_9_D08.g1_A022 Drought-stressed... 62 1e-022
gb|CF402351.1|CF402351 RTWW1_19_D06.g1_A015 Well-watered lo... 62 1e-022
gb|CO168007.1|CO168007 FLD1_72_E01.g1_A029 Root flooded Pin... 62 1e-022
gb|CF400190.1|CF400190 RTWW1_3_A07.g1_A015 Well-watered lob... 62 1e-022
gb|CF472614.1|CF472614 RTDS1_10_H01.g1_A015 Drought-stresse... 62 1e-022
gb|CF673138.1|CF673138 RTCNT1_76_H06.b1_A029 Root control P... 62 1e-022
gb|DR080819.1|DR080819 RTFEPL1_25_A05.g1_A029 Roots plus ad... 62 1e-022
gb|CF385591.1|CF385591 RTDR1_4_A03.g1_A015 Loblolly pine ro... 62 1e-022
gb|CF479379.1|CF479379 RTWW3_23_F07.g1_A022 Well-watered lo... 62 1e-022
gb|DR060587.1|DR060587 RTNIT1_28_F06.g1_A029 Roots minus ni... 62 1e-022
gb|CF471005.1|CF471005 RTDS1_15_C12.g1_A015 Drought-stresse... 62 1e-022
gb|CF666587.1|CF666587 RTCNT1_24_A05.g1_A029 Root control P... 62 1e-022
gb|CO176113.1|CO176113 NDL1_59_G04.g1_A029 Needles control ... 62 1e-022
gb|CF385185.1|CF385185 RTDR1_2_E07.g1_A015 Loblolly pine ro... 62 1e-022
gb|CF385249.1|CF385249 RTDR1_2_G06.g1_A015 Loblolly pine ro... 62 1e-022
gb|CF400340.1|CF400340 RTWW1_4_E04.g1_A015 Well-watered lob... 62 1e-022
gb|CF476609.1|CF476609 RTWW3_2_B05.g1_A022 Well-watered lob... 62 1e-022
gb|CF387946.1|CF387946 RTDR1_17_G09.b1_A015 Loblolly pine r... 62 1e-022
gb|CF395992.1|CF395992 RTDS2_20_F05.g1_A021 Drought-stresse... 62 1e-022
gb|CF400987.1|CF400987 RTWW1_9_A07.b1_A015 Well-watered lob... 62 1e-022
gb|CO200015.1|CO200015 GEO2_4_H12.g1_A032 Root gravitropism... 62 1e-022
gb|CX646040.1|CX646040 COLD1_6_H10.g1_A029 Root cold Pinus ... 62 1e-022
gb|CF669854.1|CF669854 RTCNT1_46_B01.g1_A029 Root control P... 62 1e-022
gb|BX255292.1|BX255292 BX255292 Pinus pinaster differenciat... 62 1e-022
gb|CF401012.1|CF401012 RTWW1_9_A07.g1_A015 Well-watered lob... 62 1e-022
gb|DR069204.1|DR069204 RTDK1_5_C09.g1_A029 Roots, dark Pinu... 62 1e-022
gb|DR176926.1|DR176926 RTMNUT1_1_H07.g1_A029 Roots minus mi... 62 1e-022
gb|CX650020.1|CX650020 COLD1_43_B02.b1_A029 Root cold Pinus... 62 2e-022
gb|DR071245.1|DR071245 RTDK1_18_D03.g1_A029 Roots, dark Pin... 76 2e-022
gb|DR692435.1|DR692435 EST1082523 Normalized pine embryo li... 62 2e-022
gb|DR384682.1|DR384682 RTHG1_3_G09.g1_A029 Roots plus added... 66 3e-022
gb|CF665907.1|CF665907 RTCNT1_19_G10.b1_A029 Root control P... 68 3e-022
gb|CV034928.1|CV034928 RTNACL1_12_C01.g1_A029 Roots plus ad... 62 3e-022
gb|DR071220.1|DR071220 RTDK1_18_A06.g1_A029 Roots, dark Pin... 62 3e-022
gb|AY867762.1| Pinus taeda isolate FBRC1 cysteine protease ... 62 4e-022
gb|AY867759.1| Pinus taeda isolate FBRC14 cysteine protease... 62 4e-022
gb|AY867761.1| Pinus taeda isolate FBRC16 cysteine protease... 62 4e-022
gb|AY867763.1| Pinus taeda isolate FBRC2 cysteine protease ... 62 4e-022
gb|AY867765.1| Pinus taeda isolate FBRC9 cysteine protease ... 62 4e-022
gb|AY867766.1| Pinus taeda isolate FBRC21 cysteine protease... 62 4e-022
gb|AY867767.1| Pinus taeda isolate FBRC17 cysteine protease... 62 4e-022
gb|AY867768.1| Pinus taeda isolate FBRC22 cysteine protease... 62 4e-022
gb|AY867769.1| Pinus taeda isolate FBRC5 cysteine protease ... 62 4e-022
gb|AY867770.1| Pinus taeda isolate FBRC18 cysteine protease... 62 4e-022
gb|AY867771.1| Pinus taeda isolate FBRC6 cysteine protease ... 62 4e-022
gb|AY867773.1| Pinus taeda isolate FBRC20 cysteine protease... 62 4e-022
gb|AY867775.1| Pinus taeda isolate FBRC23 cysteine protease... 62 4e-022
gb|AY867777.1| Pinus taeda isolate FBRC25 cysteine protease... 62 4e-022
gb|AY867778.1| Pinus taeda isolate FBRC26 cysteine protease... 62 4e-022
gb|AY867779.1| Pinus taeda isolate FBRC27 cysteine protease... 62 4e-022
gb|AY867781.1| Pinus taeda isolate FBRC28 cysteine protease... 62 4e-022
gb|AY867782.1| Pinus taeda isolate FBRC29 cysteine protease... 62 4e-022
gb|AY867783.1| Pinus taeda isolate FBRC33 cysteine protease... 62 4e-022
gb|AY867784.1| Pinus taeda isolate FBRC30 cysteine protease... 62 4e-022
gb|AY867785.1| Pinus taeda isolate FBRC31 cysteine protease... 62 4e-022
gb|AY867787.1| Pinus taeda isolate FBRC19 cysteine protease... 62 4e-022
gb|AY867788.1| Pinus taeda isolate FBRC32 cysteine protease... 62 4e-022
gb|AY867790.1| Pinus taeda isolate FBRC13 cysteine protease... 62 4e-022
gb|AY867760.1| Pinus taeda isolate FBRC15 cysteine protease... 62 4e-022
gb|AY867772.1| Pinus taeda isolate FBRC7 cysteine protease ... 62 4e-022
gb|AY867776.1| Pinus taeda isolate FBRC24 cysteine protease... 62 4e-022
gb|DR094190.1|DR094190 STRR1_13_B09.b1_A033 Stem Response R... 62 4e-022
gb|AY867764.1| Pinus taeda isolate FBRC3 cysteine protease ... 62 5e-022
gb|AY867774.1| Pinus taeda isolate FBRC12 cysteine protease... 62 5e-022
gb|AY867780.1| Pinus taeda isolate FBRC10 cysteine protease... 62 5e-022
gb|AY867786.1| Pinus taeda isolate FBRC11 cysteine protease... 62 5e-022
gb|AY867789.1| Pinus taeda isolate FBRC4 cysteine protease ... 62 5e-022
gb|DR095647.1|DR095647 STRR1_22_D10.g1_A033 Stem Response R... 62 6e-022
gb|CF479403.1|CF479403 RTWW3_23_A03.g1_A022 Well-watered lo... 60 6e-022
gb|DR164991.1|DR164991 RTPHOS1_1_E07.g1_A029 Roots minus ph... 62 6e-022
gb|CF399930.1|CF399930 RTWW1_2_C09.b1_A015 Well-watered lob... 62 6e-022
gb|DR164061.1|DR164061 RTFE1_46_C08.g1_A029 Roots minus iro... 50 8e-022
gb|CO169502.1|CO169502 NDL1_7_B06.g1_A029 Needles control P... 50 8e-022
gb|CV034393.1|CV034393 RTNACL1_40_D08.g1_A029 Roots plus ad... 62 8e-022
gb|CF670990.1|CF670990 RTCNT1_54_A05.b1_A029 Root control P... 62 8e-022
gb|BG318325.1|BG318325 NXPV_012_C08_F NXPV (Nsf Xylem Plani... 62 9e-022
gb|CO370275.1|CO370275 RTK1_66_G02.g1_A029 Roots minus pota... 66 9e-022
gb|BX682771.1|BX682771 BX682771 Pinus pinaster differenciat... 62 1e-021
gb|DT626537.1|DT626537 EST1158461 Sequencing ESTs from lobl... 61 1e-021
gb|CV136191.1|CV136191 EST847400 Sequencing ESTs from loblo... 61 1e-021
gb|DR071910.1|DR071910 RTDK1_22_G12.g1_A029 Roots, dark Pin... 61 1e-021
gb|CF668432.1|CF668432 RTCNT1_36_A09.g1_A029 Root control P... 61 1e-021
gb|CO167863.1|CO167863 FLD1_71_E11.g1_A029 Root flooded Pin... 61 1e-021
gb|CF668995.1|CF668995 RTCNT1_39_H10.g1_A029 Root control P... 61 1e-021
gb|CF671372.1|CF671372 RTCNT1_56_D09.g1_A029 Root control P... 61 1e-021
gb|CF390910.1|CF390910 RTDR3_2_D03.g1_A022 Loblolly pine ro... 61 1e-021
gb|BE431362.1|BE431362 NXNV_181_C06_F Nsf Xylem Normal wood... 61 1e-021
gb|CF664002.1|CF664002 RTCNT1_6_C10.g1_A029 Root control Pi... 61 1e-021
gb|DR387430.1|DR387430 RTHG1_21_E08.g2_A029 Roots plus adde... 61 1e-021
gb|CR393168.1|CR393168 CR393168 RN Pinus pinaster cDNA clon... 61 1e-021
gb|CO364426.1|CO364426 RTK1_15_D07.g1_A029 Roots minus pota... 61 2e-021
gb|CF402920.1|CF402920 RTWW1_23_E10.g1_A015 Well-watered lo... 61 2e-021
gb|DR177175.1|DR177175 RTMNUT1_3_C10.g1_A029 Roots minus mi... 61 2e-021
gb|CX714844.1|CX714844 RTPQ1_27_B02.g1_A032 Roots treated w... 61 2e-021
gb|CF385673.1|CF385673 RTDR1_5_B07.g1_A015 Loblolly pine ro... 61 2e-021
gb|CF398437.1|CF398437 RTDS3_12_E06.g1_A022 Drought-stresse... 61 2e-021
gb|CF668978.1|CF668978 RTCNT1_39_G05.g1_A029 Root control P... 68 2e-021
gb|DR080647.1|DR080647 RTFEPL1_24_E06.b1_A029 Roots plus ad... 58 2e-021
gb|DR743712.1|DR743712 RTCU1_17_E09.g1_A029 Roots plus adde... 60 2e-021
gb|DR178895.1|DR178895 RTMNUT1_14_D10.g1_A029 Roots minus m... 60 2e-021
gb|CF391061.1|CF391061 RTDR3_3_G05.g1_A022 Loblolly pine ro... 68 3e-021
gb|DR120380.1|DR120380 RTMG1_29_G10.b1_A029 Roots minus mag... 61 4e-021
gb|CR393091.1|CR393091 CR393091 RN Pinus pinaster cDNA clon... 61 4e-021
gb|CO363190.1|CO363190 RTK1_8_E03.b1_A029 Roots minus potas... 69 5e-021
gb|CO162906.1|CO162906 FLD1_38_F07.b1_A029 Root flooded Pin... 58 7e-021
gb|DR052775.1|DR052775 RTCA1_6_F12.g1_A029 Roots minus calc... 58 7e-021
gb|DR011031.1|DR011031 HEAT1_2_H09.g1_A029 Root at 37 C for... 62 9e-021
gb|DR176916.1|DR176916 RTMNUT1_1_G07.g1_A029 Roots minus mi... 62 1e-020
gb|DN614689.1|DN614689 EST967739 Subtracted pine embryo lib... 60 1e-020
gb|DR058442.1|DR058442 RTNIT1_11_G04.g1_A029 Roots minus ni... 60 1e-020
>gb|CO199449.1|CO199449 GEO2_1_F10.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_1_F10_A032 3', mRNA sequence
Length = 890
Score = 67.0 bits (140), Expect(6) = 3e-050
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +1 / -2
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
+C SCWAF T A +E I +I TG L+SLSEQEL+DCD
Sbjct: 790 ACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCD 680
Score = 60.6 bits (126), Expect(6) = 3e-050
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1 / -2
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G S SG YW+VKNSWG+SWGE G++R++R++
Sbjct: 352 GYGSESGTDYWIVKNSWGKSWGEEGFIRLQRNI 254
Score = 53.3 bits (110), Expect(6) = 3e-050
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +1 / -2
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADSSS 936
G QFY GVF+ CGT+++H +T+VGYG++S +
Sbjct: 433 GREFQFYESGVFTSACGTQLDHGVTLVGYGSESGT 329
Score = 49.2 bits (101), Expect(6) = 3e-050
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1 / -2
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G + ++I NGGL +E +YP H TI DY +P +
Sbjct: 673 YNQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPEND 494
Score = 34.1 bits (68), Expect(6) = 3e-050
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / -2
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV P+K+QG
Sbjct: 835 DWREKGAVAPVKDQG 791
Score = 27.2 bits (53), Expect(6) = 3e-050
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1 / -2
Query: 1027 GLCGIALDLAYPV 1065
G+CGIA++ +YPV
Sbjct: 238 GICGIAMEASYPV 200
>gb|DR012887.1|DR012887 HEAT1_15_D05.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_15_D05_A029 5', mRNA sequence
Length = 701
Score = 67.0 bits (140), Expect(6) = 2e-049
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +1 / +2
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
+C SCWAF T A +E I +I TG L+SLSEQEL+DCD
Sbjct: 113 ACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCD 223
Score = 59.3 bits (123), Expect(6) = 2e-049
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +1 / +2
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G S SG YW+VKNSWG+SWGE G+++++R++
Sbjct: 551 GYGSESGTDYWIVKNSWGKSWGEEGFIKLQRNI 649
Score = 53.3 bits (110), Expect(6) = 2e-049
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +1 / +2
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADSSS 936
G QFY GVF+ CGT+++H +T+VGYG++S +
Sbjct: 470 GREFQFYESGVFTSACGTQLDHGVTLVGYGSESGT 574
Score = 49.2 bits (101), Expect(6) = 2e-049
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1 / +2
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G + ++I NGGL +E +YP H TI DY +P +
Sbjct: 230 YNQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPEND 409
Score = 34.1 bits (68), Expect(6) = 2e-049
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV P+K+QG
Sbjct: 68 DWREKGAVAPVKDQG 112
Score = 25.4 bits (49), Expect(6) = 2e-049
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 1027 GLCGIALDLAYP 1062
G+CGIA++ +YP
Sbjct: 665 GICGIAMEASYP 700
>gb|DR070649.1|DR070649 RTDK1_14_F01.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_14_F01_A029 5', mRNA sequence
Length = 847
Score = 67.5 bits (141), Expect(6) = 1e-048
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +1
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 82 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 192
Score = 61.1 bits (127), Expect(6) = 1e-048
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +1 / +1
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G S SG YW+VKNSWG+SWGE+G++R++R++
Sbjct: 520 GYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 618
Score = 53.3 bits (110), Expect(6) = 1e-048
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1 / +1
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADS 930
G + QFY GVF+ CGT+++H +T+VGYG++S
Sbjct: 439 GRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 537
Score = 46.0 bits (94), Expect(6) = 1e-048
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1 / +1
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G ++++I NGGL +E +YP H TI Y +P +
Sbjct: 199 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPEND 378
Score = 30.4 bits (60), Expect(6) = 1e-048
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 37 DWREKGAVAAVKDQG 81
Score = 27.2 bits (53), Expect(6) = 1e-048
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1 / +1
Query: 1027 GLCGIALDLAYPV 1065
G+CGIA++ +YPV
Sbjct: 634 GMCGIAMEASYPV 672
>gb|CF398991.1|CF398991 RTDS3_11_H09.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_11_H09_A022 5', mRNA sequence
Length = 756
Score = 67.5 bits (141), Expect(6) = 1e-048
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +1
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 115 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 225
Score = 61.1 bits (127), Expect(6) = 1e-048
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +1 / +1
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G S SG YW+VKNSWG+SWGE+G++R++R++
Sbjct: 553 GYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 651
Score = 53.3 bits (110), Expect(6) = 1e-048
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1 / +1
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADS 930
G + QFY GVF+ CGT+++H +T+VGYG++S
Sbjct: 472 GRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 570
Score = 46.0 bits (94), Expect(6) = 1e-048
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1 / +1
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G ++++I NGGL +E +YP H TI Y +P +
Sbjct: 232 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPEND 411
Score = 30.4 bits (60), Expect(6) = 1e-048
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 70 DWREKGAVAAVKDQG 114
Score = 27.2 bits (53), Expect(6) = 1e-048
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1 / +1
Query: 1027 GLCGIALDLAYPV 1065
G+CGIA++ +YPV
Sbjct: 667 GMCGIAMEASYPV 705
>gb|CF668985.1|CF668985 RTCNT1_39_G12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_39_G12_A029 5', mRNA sequence
Length = 736
Score = 67.5 bits (141), Expect(6) = 1e-048
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 210 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 320
Score = 56.5 bits (117), Expect(6) = 1e-048
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +1 / +3
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRM 1005
G S SG YW+VKNSWG+SWGE+G++R+
Sbjct: 648 GYGSESGKDYWIVKNSWGKSWGEKGFIRL 734
Score = 53.3 bits (110), Expect(6) = 1e-048
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADS 930
G + QFY GVF+ CGT+++H +T+VGYG++S
Sbjct: 567 GRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 665
Score = 46.0 bits (94), Expect(6) = 1e-048
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G ++++I NGGL +E +YP H TI Y +P +
Sbjct: 327 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPEND 506
Score = 31.8 bits (63), Expect(6) = 1e-048
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / +3
Query: 274 NLTYTLGENQFADLTEEEFLDLY 342
N ++ LG NQFADL+ EEF Y
Sbjct: 3 NPSFKLGLNQFADLSHEEFKATY 71
Score = 30.4 bits (60), Expect(6) = 1e-048
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 165 DWREKGAVAAVKDQG 209
>gb|DR687672.1|DR687672 EST1077754 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABV23 3' end, mRNA sequence
Length = 788
Score = 67.0 bits (140), Expect(6) = 6e-048
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +1 / +2
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
+C SCWAF T A +E I +I TG L+SLSEQEL+DCD
Sbjct: 41 ACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCD 151
Score = 60.2 bits (125), Expect(6) = 6e-048
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1 / +2
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G S SG YW+VKNSWG+SWGE GY++++R++
Sbjct: 479 GYGSESGTDYWIVKNSWGKSWGEEGYIKLQRNL 577
Score = 53.3 bits (110), Expect(6) = 6e-048
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +1 / +2
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADSSS 936
G QFY GVF+ CGT+++H +T+VGYG++S +
Sbjct: 398 GREFQFYESGVFTSACGTQLDHGVTLVGYGSESGT 502
Score = 49.2 bits (101), Expect(6) = 6e-048
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1 / +2
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G + ++I NGGL +E +YP H TI DY +P +
Sbjct: 158 YNQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPEND 337
Score = 27.2 bits (53), Expect(6) = 6e-048
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1 / +2
Query: 1027 GLCGIALDLAYPV 1065
G+CGIA++ +YPV
Sbjct: 593 GICGIAMEASYPV 631
Score = 26.3 bits (51), Expect(6) = 6e-048
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 442 RSKGAVTPIKNQG 480
R KGAV P+K+QG
Sbjct: 2 REKGAVAPVKDQG 40
>gb|DT634371.1|DT634371 EST1149302 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG526 3' end, mRNA sequence
Length = 758
Score = 67.0 bits (140), Expect(6) = 6e-048
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +1 / +1
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
+C SCWAF T A +E I +I TG L+SLSEQEL+DCD
Sbjct: 49 ACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCD 159
Score = 60.2 bits (125), Expect(6) = 6e-048
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1 / +1
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G S SG YW+VKNSWG+SWGE GY++++R++
Sbjct: 487 GYGSESGTDYWIVKNSWGKSWGEEGYIKLQRNL 585
Score = 53.3 bits (110), Expect(6) = 6e-048
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +1 / +1
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADSSS 936
G QFY GVF+ CGT+++H +T+VGYG++S +
Sbjct: 406 GREFQFYESGVFTSACGTQLDHGVTLVGYGSESGT 510
Score = 49.2 bits (101), Expect(6) = 6e-048
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1 / +1
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G + ++I NGGL +E +YP H TI DY +P +
Sbjct: 166 YNQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPEND 345
Score = 27.2 bits (53), Expect(6) = 6e-048
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1 / +1
Query: 1027 GLCGIALDLAYPV 1065
G+CGIA++ +YPV
Sbjct: 601 GICGIAMEASYPV 639
Score = 26.3 bits (51), Expect(6) = 6e-048
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 442 RSKGAVTPIKNQG 480
R KGAV P+K+QG
Sbjct: 10 REKGAVAPVKDQG 48
>gb|DR022576.1|DR022576 STRS1_52_B04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_52_B04_A034 3', mRNA sequence
Length = 768
Score = 100 bits (214), Expect(5) = 2e-047
Identities = 37/67 (55%), Positives = 48/67 (71%)
Frame = +1 / +2
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGL 666
C SCWAF T A++E I I TGKLVSLSEQ+L+DC + GCN G N ++++I NGG+
Sbjct: 50 CGSCWAFSTVASVEGINYIKTGKLVSLSEQQLVDCSKENAGCNGGLMDNAFQYIIDNGGI 229
Query: 667 TTEANYP 687
+EA YP
Sbjct: 230 VSEAEYP 250
Score = 57.4 bits (119), Expect(5) = 2e-047
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +1 / +2
Query: 928 SSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
S G+ YW+V+NSWG WGE+GY+RM+R +
Sbjct: 500 SPEGIDYWIVRNSWGPKWGEKGYIRMQRGI 589
Score = 52.4 bits (108), Expect(5) = 2e-047
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1 / +2
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G QFYS GVF+G+CG +++H + VVGYG
Sbjct: 407 GRDFQFYSSGVFTGKCGNKLDHGVVVVGYG 496
Score = 38.6 bits (78), Expect(5) = 2e-047
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAVTP+KNQG
Sbjct: 2 DWRKKGAVTPVKNQG 46
Score = 22.6 bits (43), Expect(5) = 2e-047
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1 / +2
Query: 1027 GLCGIALDLAYP 1062
G CGIA+ +YP
Sbjct: 602 GKCGIAMQASYP 637
>gb|DR179208.1|DR179208 RTMNUT1_16_E04.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_16_E04_A029 5', mRNA sequence
Length = 723
Score = 99.6 bits (211), Expect(5) = 3e-047
Identities = 39/89 (43%), Positives = 50/89 (56%)
Frame = +1 / +1
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGL 666
C SCWAF T A++E I I TGKLVSLSEQ+L+DC + GCN G N ++++I NGG+
Sbjct: 205 CGSCWAFSTVASVEGINYIKTGKLVSLSEQQLVDCSKENAGCNGGLMDNAFQYIIDNGGI 384
Query: 667 TTEANYPXXXXXXXXXXXXXXXHAATISD 753
+E YP TI D
Sbjct: 385 VSEEEYPYTAEASECSTTKIESTKTTIID 471
Score = 53.8 bits (111), Expect(5) = 3e-047
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +1 / +1
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G QFYS GVF+G+CGT+++H + VVGYG
Sbjct: 559 GQDFQFYSTGVFTGKCGTKLDHGVVVVGYG 648
Score = 49.6 bits (102), Expect(5) = 3e-047
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1 / +1
Query: 928 SSSGLKYWLVKNSWGQSWGERGYL 999
S G+ YW+V+NSWG WGE+GY+
Sbjct: 652 SPEGINYWIVRNSWGPEWGEKGYI 723
Score = 38.6 bits (78), Expect(5) = 3e-047
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAVTP+KNQG
Sbjct: 157 DWRKKGAVTPVKNQG 201
Score = 22.1 bits (42), Expect(5) = 3e-047
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1 / +1
Query: 301 QFADLTEEEFLDLYTMKGMPVRRDAGKKR 387
+FADL+ EEF ++ M R + R
Sbjct: 13 KFADLSNEEFKAMHMTTTMENHRSLRRDR 99
>gb|CX716008.1|CX716008 RTPQ1_39_C01.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_39_C01_A032 5', mRNA sequence
Length = 687
Score = 67.5 bits (141), Expect(5) = 1e-045
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 141 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 251
Score = 61.1 bits (127), Expect(5) = 1e-045
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +1 / +3
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G S SG YW+VKNSWG+SWGE+G++R++R++
Sbjct: 579 GYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 677
Score = 53.3 bits (110), Expect(5) = 1e-045
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADS 930
G + QFY GVF+ CGT+++H +T+VGYG++S
Sbjct: 498 GRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 596
Score = 46.0 bits (94), Expect(5) = 1e-045
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G ++++I NGGL +E +YP H TI Y +P +
Sbjct: 258 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPEND 437
Score = 30.4 bits (60), Expect(5) = 1e-045
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 96 DWREKGAVAAVKDQG 140
>gb|CF393744.1|CF393744 RTDS2_1_F11.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_1_F11_A021 3', mRNA sequence
Length = 756
Score = 67.5 bits (141), Expect(5) = 1e-044
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / -1
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 714 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 604
Score = 61.1 bits (127), Expect(5) = 1e-044
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +1 / -1
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G S SG YW+VKNSWG+SWGE+G++R++R++
Sbjct: 276 GYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 178
Score = 53.3 bits (110), Expect(5) = 1e-044
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1 / -1
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADS 930
G + QFY GVF+ CGT+++H +T+VGYG++S
Sbjct: 357 GRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 259
Score = 46.0 bits (94), Expect(5) = 1e-044
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1 / -1
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G ++++I NGGL +E +YP H TI Y +P +
Sbjct: 597 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPEND 418
Score = 27.2 bits (53), Expect(5) = 1e-044
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 1027 GLCGIALDLAYPV 1065
G+CGIA++ +YPV
Sbjct: 162 GMCGIAMEASYPV 124
>gb|CF393377.1|CF393377 RTDR3_20_F10.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_20_F10_A022 5', mRNA
sequence
Length = 754
Score = 67.5 bits (141), Expect(5) = 1e-044
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 24 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 134
Score = 61.1 bits (127), Expect(5) = 1e-044
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +1 / +3
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G S SG YW+VKNSWG+SWGE+G++R++R++
Sbjct: 462 GYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 560
Score = 53.3 bits (110), Expect(5) = 1e-044
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADS 930
G + QFY GVF+ CGT+++H +T+VGYG++S
Sbjct: 381 GRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 479
Score = 46.0 bits (94), Expect(5) = 1e-044
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G ++++I NGGL +E +YP H TI Y +P +
Sbjct: 141 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPEND 320
Score = 27.2 bits (53), Expect(5) = 1e-044
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1 / +3
Query: 1027 GLCGIALDLAYPV 1065
G+CGIA++ +YPV
Sbjct: 576 GMCGIAMEASYPV 614
>gb|DR019198.1|DR019198 STRS1_28_A04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_A04_A034 5', mRNA sequence
Length = 881
Score = 94.1 bits (199), Expect(5) = 6e-044
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +1 / +3
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGL 666
C SCWAF T A++E I+ + TGKLVSLSEQ+L+DC + GCN G + ++++I NGG+
Sbjct: 183 CGSCWAFSTIASVEGISYLKTGKLVSLSEQQLVDCSKENAGCNGGLMDSAFQYIIDNGGV 362
Query: 667 TTEANYP 687
E YP
Sbjct: 363 VAEDEYP 383
Score = 58.8 bits (122), Expect(5) = 6e-044
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +1 / +3
Query: 928 SSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
S G+ YW+V+NSWG WGE GY++M+RD+
Sbjct: 633 SPEGINYWIVRNSWGPEWGEEGYIKMQRDI 722
Score = 48.7 bits (100), Expect(5) = 6e-044
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G QFYS GVF+G+C T ++H + VGYG
Sbjct: 540 GKDFQFYSKGVFTGECATELDHGVVAVGYG 629
Score = 36.3 bits (73), Expect(5) = 6e-044
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV P+KNQG
Sbjct: 135 DWREKGAVNPVKNQG 179
Score = 22.6 bits (43), Expect(5) = 6e-044
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1 / +3
Query: 1027 GLCGIALDLAYP 1062
G CGIA+ +YP
Sbjct: 735 GKCGIAMQASYP 770
>gb|DR179132.1|DR179132 RTMNUT1_16_E04.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_16_E04_A029 3', mRNA sequence
Length = 869
Score = 99.6 bits (211), Expect(4) = 1e-042
Identities = 39/89 (43%), Positives = 50/89 (56%)
Frame = +1 / +1
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGL 666
C SCWAF T A++E I I TGKLVSLSEQ+L+DC + GCN G N ++++I NGG+
Sbjct: 4 CGSCWAFSTVASVEGINYIKTGKLVSLSEQQLVDCSKENAGCNGGLMDNAFQYIIDNGGI 183
Query: 667 TTEANYPXXXXXXXXXXXXXXXHAATISD 753
+E YP TI D
Sbjct: 184 VSEEEYPYTAEASECSTTKIESTKTTIID 270
Score = 54.7 bits (113), Expect(4) = 1e-042
Identities = 15/30 (50%), Positives = 24/30 (80%)
Frame = +1 / +1
Query: 928 SSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
S G+ YW+V+NSWG WGE+GY++M++ +
Sbjct: 451 SPEGINYWIVRNSWGPEWGEKGYIKMQQGI 540
Score = 53.8 bits (111), Expect(4) = 1e-042
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +1 / +1
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G QFYS GVF+G+CGT+++H + VVGYG
Sbjct: 358 GQDFQFYSTGVFTGKCGTKLDHGVVVVGYG 447
Score = 22.6 bits (43), Expect(4) = 1e-042
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1 / +1
Query: 1027 GLCGIALDLAYP 1062
G CGIA+ +YP
Sbjct: 553 GKCGIAMQASYP 588
>gb|CX650902.1|CX650902 COLD1_48_G09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_48_G09_A029 5', mRNA sequence
Length = 771
Score = 61.1 bits (127), Expect(5) = 1e-042
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +1 / +3
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G S SG YW+VKNSWG+SWGE+G++R++R++
Sbjct: 441 GYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 539
Score = 60.2 bits (125), Expect(5) = 1e-042
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +1 / +3
Query: 493 SCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
+CWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 12 NCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 113
Score = 53.3 bits (110), Expect(5) = 1e-042
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADS 930
G + QFY GVF+ CGT+++H +T+VGYG++S
Sbjct: 360 GRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 458
Score = 46.0 bits (94), Expect(5) = 1e-042
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G ++++I NGGL +E +YP H TI Y +P +
Sbjct: 120 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPEND 299
Score = 27.2 bits (53), Expect(5) = 1e-042
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1 / +3
Query: 1027 GLCGIALDLAYPV 1065
G+CGIA++ +YPV
Sbjct: 555 GMCGIAMEASYPV 593
>gb|CF394277.1|CF394277 RTDS2_4_A02.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_4_A02_A021 5', mRNA sequence
Length = 731
Score = 67.5 bits (141), Expect(5) = 1e-041
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +1
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 49 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 159
Score = 53.3 bits (110), Expect(5) = 1e-041
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1 / +1
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADS 930
G + QFY GVF+ CGT+++H +T+VGYG++S
Sbjct: 406 GRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 504
Score = 50.6 bits (104), Expect(5) = 1e-041
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1 / +1
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDVGRG 1026
G S SG YW+VKNSWG+SWG G+ + ++ RG
Sbjct: 487 GYGSESGKDYWIVKNSWGKSWGREGFHQTAQEH*RG 594
Score = 46.0 bits (94), Expect(5) = 1e-041
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1 / +1
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G ++++I NGGL +E +YP H TI Y +P +
Sbjct: 166 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPEND 345
Score = 27.2 bits (53), Expect(5) = 1e-041
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1 / +2
Query: 1027 GLCGIALDLAYPV 1065
G+CGIA++ +YPV
Sbjct: 602 GMCGIAMEASYPV 640
>gb|DR180554.1|DR180554 RTMNUT1_33_H11.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_33_H11_A029 3', mRNA sequence
Length = 832
Score = 67.0 bits (140), Expect(6) = 3e-041
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +1 / -3
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
+C SCWAF T A +E I +I TG L+SLSEQEL+DCD
Sbjct: 434 ACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCD 324
Score = 49.2 bits (101), Expect(6) = 3e-041
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1 / -3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G + ++I NGGL +E +YP H TI DY +P +
Sbjct: 317 YNQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPEND 138
Score = 38.6 bits (78), Expect(6) = 3e-041
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1 / -3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAIT 906
G QFY GVF+ CGT+++H +T
Sbjct: 77 GREFQFYESGVFTSACGTQLDHGVT 3
Score = 36.8 bits (74), Expect(6) = 3e-041
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1 / -3
Query: 271 GNLTYTLGENQFADLTEEEFLDLY 342
GN +Y LG NQFADL+ EEF Y
Sbjct: 644 GNRSYKLGLNQFADLSHEEFKATY 573
Score = 34.5 bits (69), Expect(6) = 3e-041
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1 / -3
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNR 267
+M+ + W A + ++Y +E+Q+RF V++ N +I N+
Sbjct: 767 IMELYELWLAEHKKAYNGLDEKQKRFTVFKDNFLYIHEHNQ 645
Score = 34.1 bits (68), Expect(6) = 3e-041
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / -3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV P+K+QG
Sbjct: 479 DWREKGAVAPVKDQG 435
>gb|CV031915.1|CV031915 RTNACL1_4_C06.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_4_C06_A029 5', mRNA sequence
Length = 769
Score = 67.0 bits (140), Expect(5) = 2e-040
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +1 / +1
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
+C SCWAF T A +E I +I TG L+SLSEQEL+DCD
Sbjct: 292 ACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCD 402
Score = 53.3 bits (110), Expect(5) = 2e-040
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +1 / +1
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADSSS 936
G QFY GVF+ CGT+++H +T+VGYG++S +
Sbjct: 649 GREFQFYESGVFTSACGTQLDHGVTLVGYGSESGT 753
Score = 49.2 bits (101), Expect(5) = 2e-040
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1 / +1
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G + ++I NGGL +E +YP H TI DY +P +
Sbjct: 409 YNQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPEND 588
Score = 36.8 bits (74), Expect(5) = 2e-040
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1 / +1
Query: 271 GNLTYTLGENQFADLTEEEFLDLY 342
GN +Y LG NQFADL+ EEF Y
Sbjct: 82 GNRSYKLGLNQFADLSHEEFKATY 153
Score = 34.1 bits (68), Expect(5) = 2e-040
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV P+K+QG
Sbjct: 247 DWREKGAVAPVKDQG 291
>gb|CO164051.1|CO164051 FLD1_45_B05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_45_B05_A029 5', mRNA sequence
Length = 905
Score = 67.5 bits (141), Expect(5) = 9e-040
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 498 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 608
Score = 67.5 bits (141), Expect(5) = 9e-040
Identities = 27/66 (40%), Positives = 41/66 (62%)
Frame = +1 / +3
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEE 324
+MD + W A + ++Y +E+Q+RF V++ N +I N GN ++ LG NQFADL+ E
Sbjct: 162 IMDLYELWLAQHRKAYNGLDEKQKRFSVFKDNFLYIHQHNNQGNPSFKLGLNQFADLSHE 341
Query: 325 EFLDLY 342
EF Y
Sbjct: 342 EFKATY 359
Score = 46.0 bits (94), Expect(5) = 9e-040
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G ++++I NGGL +E +YP H TI Y +P +
Sbjct: 615 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRXNAHVVTIDSYEDVPEND 794
Score = 30.4 bits (60), Expect(5) = 9e-040
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 453 DWREKGAVAAVKDQG 497
Score = 26.7 bits (52), Expect(5) = 9e-040
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCG 882
G + QFY GVF CG
Sbjct: 855 GRAFQFYESGVFHSTCG 905
>gb|CX714408.1|CX714408 RTPQ1_22_A12.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_22_A12_A032 3', mRNA sequence
Length = 789
Score = 94.1 bits (199), Expect(4) = 1e-039
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +1 / +3
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGL 666
C SCWAF T A++E I+ + TGKLVSLSEQ+L+DC + GCN G + ++++I NGG+
Sbjct: 6 CGSCWAFSTIASVEGISYLKTGKLVSLSEQQLVDCSKENAGCNGGLMDSAFQYIIDNGGV 185
Query: 667 TTEANYP 687
E YP
Sbjct: 186 VAEDEYP 206
Score = 58.8 bits (122), Expect(4) = 1e-039
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +1 / +3
Query: 928 SSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
S G+ YW+V+NSWG WGE GY++M+RD+
Sbjct: 456 SPEGINYWIVRNSWGPEWGEEGYIKMQRDI 545
Score = 51.5 bits (106), Expect(4) = 1e-039
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G QFYS GVF+G+CGT ++H + VGYG
Sbjct: 363 GKDFQFYSKGVFTGECGTELDHGVVAVGYG 452
Score = 22.6 bits (43), Expect(4) = 1e-039
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1 / +3
Query: 1027 GLCGIALDLAYP 1062
G CGIA+ +YP
Sbjct: 558 GKCGIAMQASYP 593
>gb|CX652206.1|CX652206 COLD1_57_D09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_57_D09_A029 5', mRNA sequence
Length = 718
Score = 67.5 bits (141), Expect(5) = 2e-038
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 270 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 380
Score = 50.1 bits (103), Expect(5) = 2e-038
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G + QFY GVF+ CGT+++H +T+VGYG
Sbjct: 627 GRAFQFYESGVFTSTCGTQLDHGVTLVGYG 716
Score = 46.0 bits (94), Expect(5) = 2e-038
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G ++++I NGGL +E +YP H TI Y +P +
Sbjct: 387 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPEND 566
Score = 39.6 bits (80), Expect(5) = 2e-038
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1 / +3
Query: 238 NIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLY 342
N +I N GN ++ LG NQFADL+ EEF Y
Sbjct: 27 NFLYIHQHNNQGNPSFKLGLNQFADLSHEEFKATY 131
Score = 30.4 bits (60), Expect(5) = 2e-038
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 225 DWREKGAVAAVKDQG 269
>gb|DR011623.1|DR011623 HEAT1_6_H03.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_6_H03_A029 5', mRNA sequence
Length = 781
Score = 61.1 bits (127), Expect(5) = 5e-038
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +1 / +3
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G S SG YW+VKNSWG+SWGE+G++R++R++
Sbjct: 408 GYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 506
Score = 53.3 bits (110), Expect(5) = 5e-038
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADS 930
G + QFY GVF+ CGT+++H +T+VGYG++S
Sbjct: 327 GRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 425
Score = 46.0 bits (94), Expect(5) = 5e-038
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G ++++I NGGL +E +YP H TI Y +P +
Sbjct: 87 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPEND 266
Score = 44.6 bits (91), Expect(5) = 5e-038
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +1 / +3
Query: 517 ATIESITKITTGKLVSLSEQELIDCD 594
A +E I +I TG L SLSEQEL+DCD
Sbjct: 3 AAVEGINQIVTGNLTSLSEQELVDCD 80
Score = 27.2 bits (53), Expect(5) = 5e-038
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1 / +3
Query: 1027 GLCGIALDLAYPV 1065
G+CGIA++ +YPV
Sbjct: 522 GMCGIAMEASYPV 560
>gb|CO200926.1|CO200926 RTCNT2_2_B04.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_2_B04_A029 5', mRNA sequence
Length = 804
Score = 67.5 bits (141), Expect(4) = 7e-037
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +1
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 514 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 624
Score = 67.5 bits (141), Expect(4) = 7e-037
Identities = 27/66 (40%), Positives = 41/66 (62%)
Frame = +1 / +1
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEE 324
+MD + W A + ++Y +E+Q+RF V++ N +I N GN ++ LG NQFADL+ E
Sbjct: 178 IMDLYELWLAQHRKAYNGLDEKQKRFSVFKDNFLYIHQHNNQGNPSFKLGLNQFADLSHE 357
Query: 325 EFLDLY 342
EF Y
Sbjct: 358 EFKATY 375
Score = 45.5 bits (93), Expect(4) = 7e-037
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +1 / +1
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLP 768
Y+ GCN G ++++I NGGL +E +YP H TI Y +P
Sbjct: 631 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVP 801
Score = 30.4 bits (60), Expect(4) = 7e-037
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 469 DWREKGAVAAVKDQG 513
>gb|DR022645.1|DR022645 STRS1_52_B04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_52_B04_A034 5', mRNA sequence
Length = 669
Score = 100 bits (214), Expect(4) = 1e-036
Identities = 37/67 (55%), Positives = 48/67 (71%)
Frame = +1 / +3
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGL 666
C SCWAF T A++E I I TGKLVSLSEQ+L+DC + GCN G N ++++I NGG+
Sbjct: 204 CGSCWAFSTVASVEGINYIKTGKLVSLSEQQLVDCSKENAGCNGGLMDNAFQYIIDNGGI 383
Query: 667 TTEANYP 687
+EA YP
Sbjct: 384 VSEAEYP 404
Score = 52.4 bits (108), Expect(4) = 1e-036
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G QFYS GVF+G+CG +++H + VVGYG
Sbjct: 561 GRDFQFYSSGVFTGKCGNKLDHGVVVVGYG 650
Score = 38.6 bits (78), Expect(4) = 1e-036
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAVTP+KNQG
Sbjct: 156 DWRKKGAVTPVKNQG 200
Score = 24.0 bits (46), Expect(4) = 1e-036
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1 / +3
Query: 292 GENQFADLTEEEFLDLYTMKGMPVRR 369
G N+FADL+ +EF ++ M R
Sbjct: 3 GLNKFADLSNQEFKAMHMKTRMEKHR 80
>gb|CF398001.1|CF398001 RTDS3_22_F03.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_22_F03_A022 3', mRNA sequence
Length = 744
Score = 53.3 bits (110), Expect(5) = 2e-035
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1 / -3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADS 930
G + QFY GVF+ CGT+++H +T+VGYG++S
Sbjct: 412 GRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 314
Score = 50.1 bits (103), Expect(5) = 2e-035
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +1 / -3
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDVGRG 1026
G S SG YW+VKNSWG+SWG G+ + + RG
Sbjct: 331 GYGSESGKDYWIVKNSWGKSWGREGFHQTAEEH*RG 224
Score = 46.9 bits (96), Expect(5) = 2e-035
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1 / -3
Query: 511 TAATIESITKITTGKLVSLSEQELIDCD 594
T A +E I +I TG L SLSEQEL+DCD
Sbjct: 742 TVAAVEGINQIVTGNLTSLSEQELVDCD 659
Score = 46.0 bits (94), Expect(5) = 2e-035
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1 / -3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G ++++I NGGL +E +YP H TI Y +P +
Sbjct: 652 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPEND 473
Score = 27.2 bits (53), Expect(5) = 2e-035
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 1027 GLCGIALDLAYPV 1065
G+CGIA++ +YPV
Sbjct: 216 GMCGIAMEASYPV 178
>gb|CF393742.1|CF393742 RTDS2_1_G06.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_1_G06_A021 3', mRNA sequence
Length = 615
Score = 67.5 bits (141), Expect(4) = 2e-035
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / -3
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 277 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 167
Score = 65.7 bits (137), Expect(4) = 2e-035
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +1 / -3
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEE 324
+M+ + W A + ++Y +E+Q+RF V++ N +I N GN ++ LG NQFADL+ E
Sbjct: 613 IMELYELWLAQHRKAYNGLDEKQKRFSVFKDNFLYIHQHNNQGNPSFKLGLNQFADLSHE 434
Query: 325 EFLDLY 342
EF Y
Sbjct: 433 EFKATY 416
Score = 42.8 bits (87), Expect(4) = 2e-035
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1 / -3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDY 756
Y+ GCN G ++++I NGGL +E +YP H TI Y
Sbjct: 160 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSY 2
Score = 30.4 bits (60), Expect(4) = 2e-035
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / -3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 322 DWREKGAVAAVKDQG 278
>gb|CO167267.1|CO167267 FLD1_67_H10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_67_H10_A029 5', mRNA sequence
Length = 814
Score = 61.1 bits (127), Expect(5) = 3e-035
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +1 / +3
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G S SG YW+VKNSWG+SWGE+G++R++R++
Sbjct: 378 GYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 476
Score = 53.3 bits (110), Expect(5) = 3e-035
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADS 930
G + QFY GVF+ CGT+++H +T+VGYG++S
Sbjct: 297 GRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 395
Score = 46.0 bits (94), Expect(5) = 3e-035
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G ++++I NGGL +E +YP H TI Y +P +
Sbjct: 57 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPEND 236
Score = 35.0 bits (70), Expect(5) = 3e-035
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1 / +3
Query: 547 TGKLVSLSEQELIDCD 594
TG L SLSEQEL+DCD
Sbjct: 3 TGNLTSLSEQELVDCD 50
Score = 27.2 bits (53), Expect(5) = 3e-035
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1 / +3
Query: 1027 GLCGIALDLAYPV 1065
G+CGIA++ +YPV
Sbjct: 492 GMCGIAMEASYPV 530
>gb|DR094013.1|DR094013 STRR1_11_H02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_11_H02_A033 5', mRNA sequence
Length = 748
Score = 67.0 bits (140), Expect(5) = 5e-035
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +1 / +3
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
+C SCWAF T A +E I +I TG L+SLSEQEL+DCD
Sbjct: 444 ACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCD 554
Score = 49.2 bits (101), Expect(5) = 5e-035
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G + ++I NGGL +E +YP H TI DY +P +
Sbjct: 561 YNQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPEND 740
Score = 36.8 bits (74), Expect(5) = 5e-035
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1 / +3
Query: 271 GNLTYTLGENQFADLTEEEFLDLY 342
GN +Y LG NQFADL+ EEF Y
Sbjct: 234 GNRSYKLGLNQFADLSHEEFKATY 305
Score = 34.5 bits (69), Expect(5) = 5e-035
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1 / +3
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNR 267
+M+ + W A + ++Y +E+Q+RF V++ N +I N+
Sbjct: 111 IMELYELWVAEHKKAYNGLDEKQKRFTVFKDNFLYIHEHNQ 233
Score = 34.1 bits (68), Expect(5) = 5e-035
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV P+K+QG
Sbjct: 399 DWREKGAVAPVKDQG 443
>gb|DR102486.1|DR102486 STRR1_81_B04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_81_B04_A033 5', mRNA sequence
Length = 621
Score = 61.1 bits (127), Expect(5) = 7e-035
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +1 / +3
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G S SG YW+VKNSWG+SWGE+G++R++R++
Sbjct: 381 GYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 479
Score = 53.3 bits (110), Expect(5) = 7e-035
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADS 930
G + QFY GVF+ CGT+++H +T+VGYG++S
Sbjct: 300 GRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 398
Score = 46.0 bits (94), Expect(5) = 7e-035
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G ++++I NGGL +E +YP H TI Y +P +
Sbjct: 60 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPEND 239
Score = 35.0 bits (70), Expect(5) = 7e-035
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1 / +3
Query: 547 TGKLVSLSEQELIDCD 594
TG L SLSEQEL+DCD
Sbjct: 6 TGNLTSLSEQELVDCD 53
Score = 25.8 bits (50), Expect(5) = 7e-035
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +1 / +3
Query: 1027 GLCGIALDLAYPV 1065
G+CGI+++ +YPV
Sbjct: 495 GMCGISMEASYPV 533
>gb|CF666059.1|CF666059 RTCNT1_20_A03.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_20_A03_A029 5', mRNA sequence
Length = 600
Score = 67.5 bits (141), Expect(4) = 2e-034
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 312 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 422
Score = 59.7 bits (124), Expect(4) = 2e-034
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +1 / +3
Query: 172 ATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLY 342
A + ++Y +E+Q+RF V++ N +I N GN ++ LG NQFADL+ EEF Y
Sbjct: 3 AQHRKAYNGLDEKQKRFSVFKDNFLYIHQHNNQGNPSFKLGLNQFADLSHEEFKATY 173
Score = 45.1 bits (92), Expect(4) = 2e-034
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLP 768
Y+ GCN G ++++I NGGL +E +YP H TI Y +P
Sbjct: 429 YNQGCNGGLMDYAFQFIIYNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYKDVP 599
Score = 30.4 bits (60), Expect(4) = 2e-034
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 267 DWREKGAVAAVKDQG 311
>gb|DR014140.1|DR014140 HEAT1_23_D09.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_23_D09_A029 5', mRNA sequence
Length = 830
Score = 67.0 bits (140), Expect(5) = 4e-034
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +1 / +1
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
+C SCWAF T A +E I +I TG L+SLSEQEL+DCD
Sbjct: 553 ACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCD 663
Score = 46.0 bits (94), Expect(5) = 4e-034
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1 / +1
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDY 756
Y+ GCN G + ++I NGGL +E +YP H TI DY
Sbjct: 670 YNQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDY 828
Score = 36.8 bits (74), Expect(5) = 4e-034
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1 / +1
Query: 271 GNLTYTLGENQFADLTEEEFLDLY 342
GN +Y LG NQFADL+ EEF Y
Sbjct: 343 GNRSYKLGLNQFADLSHEEFKATY 414
Score = 34.5 bits (69), Expect(5) = 4e-034
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1 / +1
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNR 267
+M+ + W A + ++Y +E+Q+RF V++ N +I N+
Sbjct: 220 IMELYELWVAEHKKAYNGLDEKQKRFTVFKDNFLYIHEHNQ 342
Score = 34.1 bits (68), Expect(5) = 4e-034
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV P+K+QG
Sbjct: 508 DWREKGAVAPVKDQG 552
>gb|DN445836.1|DN445836 EST941635 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIA309 5' end, mRNA sequence
Length = 864
Score = 67.5 bits (141), Expect(4) = 6e-034
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +2
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 623 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 733
Score = 65.7 bits (137), Expect(4) = 6e-034
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +1 / +2
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEE 324
+M+ + W A + ++Y +E+Q+RF V++ N +I N GN ++ LG NQFADL+ E
Sbjct: 287 IMELYELWLAQHRKAYNGLDEKQKRFSVFKDNFLYIHQHNNQGNPSFKLGLNQFADLSHE 466
Query: 325 EFLDLY 342
EF Y
Sbjct: 467 EFKATY 484
Score = 37.3 bits (75), Expect(4) = 6e-034
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1 / +2
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
Y+ GCN G ++++I NGGL +E +YP
Sbjct: 740 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYP 829
Score = 30.4 bits (60), Expect(4) = 6e-034
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 578 DWREKGAVAAVKDQG 622
>gb|DN448237.1|DN448237 EST944036 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIC251 5' end, mRNA sequence
Length = 865
Score = 67.5 bits (141), Expect(4) = 6e-034
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 624 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 734
Score = 65.7 bits (137), Expect(4) = 6e-034
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +1 / +3
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEE 324
+M+ + W A + ++Y +E+Q+RF V++ N +I N GN ++ LG NQFADL+ E
Sbjct: 288 IMELYELWLAQHRKAYNGLDEKQKRFSVFKDNFLYIHQHNNQGNPSFKLGLNQFADLSHE 467
Query: 325 EFLDLY 342
EF Y
Sbjct: 468 EFKATY 485
Score = 37.3 bits (75), Expect(4) = 6e-034
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
Y+ GCN G ++++I NGGL +E +YP
Sbjct: 741 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYP 830
Score = 30.4 bits (60), Expect(4) = 6e-034
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 579 DWREKGAVAAVKDQG 623
>gb|DR178680.1|DR178680 RTMNUT1_13_G02.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_13_G02_A029 3', mRNA sequence
Length = 810
Score = 67.5 bits (141), Expect(4) = 6e-034
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / -1
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 207 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 97
Score = 65.7 bits (137), Expect(4) = 6e-034
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +1 / -1
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEE 324
+M+ + W A + ++Y +E+Q+RF V++ N +I N GN ++ LG NQFADL+ E
Sbjct: 543 IMELYELWLAQHRKAYNGLDEKQKRFSVFKDNFLYIHQHNNQGNPSFKLGLNQFADLSHE 364
Query: 325 EFLDLY 342
EF Y
Sbjct: 363 EFKATY 346
Score = 37.3 bits (75), Expect(4) = 6e-034
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1 / -1
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
Y+ GCN G ++++I NGGL +E +YP
Sbjct: 90 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYP 1
Score = 30.4 bits (60), Expect(4) = 6e-034
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / -1
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 252 DWREKGAVAAVKDQG 208
>gb|CV035910.1|CV035910 RTNACL1_43_G04.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_43_G04_A029 3', mRNA sequence
Length = 806
Score = 67.5 bits (141), Expect(4) = 6e-034
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / -3
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 207 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 97
Score = 65.7 bits (137), Expect(4) = 6e-034
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +1 / -3
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEE 324
+M+ + W A + ++Y +E+Q+RF V++ N +I N GN ++ LG NQFADL+ E
Sbjct: 543 IMELYELWLAQHRKAYNGLDEKQKRFSVFKDNFLYIHQHNNQGNPSFKLGLNQFADLSHE 364
Query: 325 EFLDLY 342
EF Y
Sbjct: 363 EFKATY 346
Score = 37.3 bits (75), Expect(4) = 6e-034
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1 / -3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
Y+ GCN G ++++I NGGL +E +YP
Sbjct: 90 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYP 1
Score = 30.4 bits (60), Expect(4) = 6e-034
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / -3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 252 DWREKGAVAAVKDQG 208
>gb|DR181072.1|DR181072 RTMNUT1_36_D01.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_36_D01_A029 5', mRNA sequence
Length = 717
Score = 67.5 bits (141), Expect(4) = 7e-034
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 471 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 581
Score = 65.7 bits (137), Expect(4) = 7e-034
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +1 / +3
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEE 324
+M+ + W A + ++Y +E+Q+RF V++ N +I N GN ++ LG NQFADL+ E
Sbjct: 135 IMELYELWLAQHRKAYNGLDEKQKRFSVFKDNFLYIHQHNNQGNPSFKLGLNQFADLSHE 314
Query: 325 EFLDLY 342
EF Y
Sbjct: 315 EFKATY 332
Score = 37.3 bits (75), Expect(4) = 7e-034
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
Y+ GCN G ++++I NGGL +E +YP
Sbjct: 588 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYP 677
Score = 30.4 bits (60), Expect(4) = 7e-034
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 426 DWREKGAVAAVKDQG 470
>gb|CO165160.1|CO165160 FLD1_52_F08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_52_F08_A029 5', mRNA sequence
Length = 865
Score = 67.5 bits (141), Expect(4) = 2e-033
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +1
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 595 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 705
Score = 65.7 bits (137), Expect(4) = 2e-033
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +1 / +1
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEE 324
+M+ + W A + ++Y +E+Q+RF V++ N +I N GN ++ LG NQFADL+ E
Sbjct: 259 IMELYELWLAQHRKAYNGLDEKQKRFSVFKDNFLYIHQHNNQGNPSFKLGLNQFADLSHE 438
Query: 325 EFLDLY 342
EF Y
Sbjct: 439 EFKATY 456
Score = 39.6 bits (80), Expect(4) = 2e-033
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1 / +1
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATI 747
Y+ GCN G ++++I NGGL +E +YP H TI
Sbjct: 712 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTI 861
Score = 26.7 bits (52), Expect(4) = 2e-033
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQG 480
DW KGAV +K+QG
Sbjct: 550 DWIEKGAVAAVKDQG 594
>gb|CF401560.1|CF401560 RTWW1_13_C07.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_13_C07_A015 5', mRNA sequence
Length = 806
Score = 104 bits (222), Expect(4) = 2e-033
Identities = 41/93 (44%), Positives = 52/93 (55%)
Frame = +1 / +3
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGL 666
C SCW+F + IE I I+TG L+SLSEQEL+DCD + GC+ GY + WVIQNGG+
Sbjct: 288 CGSCWSFSSTGAIEGINAISTGDLISLSEQELVDCDSTNEGCDGGYMDYAFEWVIQNGGI 467
Query: 667 TTEANYPXXXXXXXXXXXXXXXHAATISDYVQL 765
TEA+YP TI Y +
Sbjct: 468 DTEADYPYTGEDGTCNTTKEGYKVVTIDGYTDV 566
Score = 42.8 bits (87), Expect(4) = 2e-033
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1 / +3
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGY 996
G S + YW+VKNSWG WG GY
Sbjct: 726 GYSSEDDVDYWIVKNSWGTDWGLDGY 803
Score = 33.1 bits (66), Expect(4) = 2e-033
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1 / +3
Query: 283 YTLGENQFADLTEEEFLDLYTMK 351
+ LG N+FADLT EEF +Y+ K
Sbjct: 96 HRLGLNKFADLTNEEFKAIYSKK 164
Score = 25.8 bits (50), Expect(4) = 2e-033
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1 / +3
Query: 844 QFYSGGVFSGQCGT 885
Q YSGG++ G C +
Sbjct: 648 QLYSGGIYDGDCSS 689
>gb|DR070631.1|DR070631 RTDK1_14_D03.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_14_D03_A029 5', mRNA sequence
Length = 823
Score = 67.0 bits (140), Expect(5) = 4e-033
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +1 / +3
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
+C SCWAF T A +E I +I TG L+SLSEQEL+DCD
Sbjct: 549 ACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCD 659
Score = 42.8 bits (87), Expect(5) = 4e-033
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISD 753
Y+ GCN G + ++I NGGL +E +YP H TI D
Sbjct: 666 YNQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDD 821
Score = 36.8 bits (74), Expect(5) = 4e-033
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1 / +3
Query: 271 GNLTYTLGENQFADLTEEEFLDLY 342
GN +Y LG NQFADL+ EEF Y
Sbjct: 339 GNRSYKLGLNQFADLSHEEFKATY 410
Score = 34.5 bits (69), Expect(5) = 4e-033
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1 / +3
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNR 267
+M+ + W A + ++Y +E+Q+RF V++ N +I N+
Sbjct: 216 IMELYELWLAEHKKAYNGLDEKQKRFTVFKDNFLYIHEHNQ 338
Score = 34.1 bits (68), Expect(5) = 4e-033
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV P+K+QG
Sbjct: 504 DWREKGAVAPVKDQG 548
>gb|DR177967.1|DR177967 RTMNUT1_8_A12.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_8_A12_A029 5', mRNA sequence
Length = 799
Score = 67.5 bits (141), Expect(4) = 6e-033
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +2
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 593 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 703
Score = 65.7 bits (137), Expect(4) = 6e-033
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +1 / +2
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEE 324
+M+ + W A + ++Y +E+Q+RF V++ N +I N GN ++ LG NQFADL+ E
Sbjct: 257 IMELYELWLAQHRKAYNGLDEKQKRFSVFKDNFLYIHQHNNQGNPSFKLGLNQFADLSHE 436
Query: 325 EFLDLY 342
EF Y
Sbjct: 437 EFKATY 454
Score = 34.1 bits (68), Expect(4) = 6e-033
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1 / +2
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
Y+ GCN G ++++I GGL +E +YP
Sbjct: 710 YNQGCNGGLMDYAFQFIIDXGGLDSEDDYP 799
Score = 30.4 bits (60), Expect(4) = 6e-033
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 548 DWREKGAVAAVKDQG 592
>gb|CF389090.1|CF389090 RTDR2_13_E01.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_13_E01_A021 5', mRNA
sequence
Length = 656
Score = 95.9 bits (203), Expect(2) = 1e-032
Identities = 37/66 (56%), Positives = 45/66 (68%)
Frame = +1 / +2
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGL 666
C SCWAF T IE + I+TGKLVSLSEQEL+DCD + GC G + WVI+NGG+
Sbjct: 413 CGSCWAFSTTGAIEGVNAISTGKLVSLSEQELVDCDATNYGCEGGDMDYAFTWVIKNGGI 592
Query: 667 TTEANY 684
TE +Y
Sbjct: 593 DTEKDY 610
Score = 68.4 bits (143), Expect(2) = 1e-032
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +1 / +2
Query: 166 WQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
W + + Y + EE+ RRFQ++R N+++I A N+ + + LG N+FADLT EEF Y
Sbjct: 62 WLGKHGKLYESHEEKARRFQIFRTNLDYIHAHNKNSSSRFRLGLNKFADLTNEEFKSRYL 241
Query: 346 MKGMPVRRD 372
K RD
Sbjct: 242 GKNSRQWRD 268
>gb|CO176188.1|CO176188 NDL1_60_H07.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_60_H07_A029 3', mRNA sequence
Length = 718
Score = 95.9 bits (203), Expect(2) = 2e-032
Identities = 37/66 (56%), Positives = 45/66 (68%)
Frame = +1 / -3
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGL 666
C SCWAF T IE + I+TGKLVSLSEQEL+DCD + GC G + WVI+NGG+
Sbjct: 230 CGSCWAFSTTGAIEGVNAISTGKLVSLSEQELVDCDATNYGCEGGDMDYAFTWVIKNGGI 51
Query: 667 TTEANY 684
TE +Y
Sbjct: 50 DTEKDY 33
Score = 68.0 bits (142), Expect(2) = 2e-032
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +1 / -3
Query: 166 WQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
W + + Y + EE+ RRFQ++R N+++I A N+ + + LG N+FADLT EEF Y
Sbjct: 581 WLGKHGKLYESHEEKARRFQIFRTNLDYIHAHNKNSSSRFRLGLNKFADLTNEEFKSRYF 402
Query: 346 MKGMPVRRD 372
K RD
Sbjct: 401 GKNSRQWRD 375
>gb|CO163261.1|CO163261 FLD1_40_B02.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_40_B02_A029 5', mRNA sequence
Length = 846
Score = 95.9 bits (203), Expect(2) = 2e-032
Identities = 37/66 (56%), Positives = 45/66 (68%)
Frame = +1 / +3
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGL 666
C SCWAF T IE + I+TGKLVSLSEQEL+DCD + GC G + WVI+NGG+
Sbjct: 456 CGSCWAFSTTGAIEGVNAISTGKLVSLSEQELVDCDATNYGCEGGDMDYAFTWVIKNGGI 635
Query: 667 TTEANY 684
TE +Y
Sbjct: 636 DTEKDY 653
Score = 68.0 bits (142), Expect(2) = 2e-032
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +1 / +3
Query: 166 WQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
W + + Y + EE+ RRFQ++R N+++I A N+ + + LG N+FADLT EEF Y
Sbjct: 105 WLGKHGKLYESHEEKARRFQIFRTNLDYIHAHNKNSSSRFRLGLNKFADLTNEEFKSRYF 284
Query: 346 MKGMPVRRD 372
K RD
Sbjct: 285 GKNSRQWRD 311
>gb|CO167710.1|CO167710 FLD1_70_E03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_70_E03_A029 5', mRNA sequence
Length = 801
Score = 67.5 bits (141), Expect(4) = 4e-032
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQEL+DCD
Sbjct: 603 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCD 713
Score = 65.7 bits (137), Expect(4) = 4e-032
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +1 / +3
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEE 324
+M+ + W A + ++Y +E+Q+RF V++ N +I N GN ++ LG NQFADL+ E
Sbjct: 267 IMELYELWLAQHRKAYNGLDEKQKRFSVFKDNFLYIHQHNNQGNPSFKLGLNQFADLSHE 446
Query: 325 EFLDLY 342
EF Y
Sbjct: 447 EFKATY 464
Score = 31.3 bits (62), Expect(4) = 4e-032
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTE 675
Y+ GCN G ++++I NGGL +E
Sbjct: 720 YNQGCNGGLMDYAFQFIIDNGGLDSE 797
Score = 30.4 bits (60), Expect(4) = 4e-032
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 558 DWREKGAVAAVKDQG 602
>gb|BX682795.1|BX682795 BX682795 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 121H06 similar to CYSTEINE PROTEINASE, mRNA
sequence
Length = 508
Score = 70.7 bits (148), Expect(3) = 5e-032
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +1 / +3
Query: 541 ITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
I TGKLVSLSEQ+L+DC + GCN G N ++++I NGG+ +E YP
Sbjct: 6 IKTGKLVSLSEQQLVDCSKENAGCNGGLMDNAFQYIIDNGGIVSEEEYP 152
Score = 56.5 bits (117), Expect(3) = 5e-032
Identities = 16/30 (53%), Positives = 24/30 (80%)
Frame = +1 / +3
Query: 928 SSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
S G+ YW+V+NSWG WGE+GY++M+R +
Sbjct: 402 SPEGINYWIVRNSWGPEWGEKGYIKMQRGI 491
Score = 53.8 bits (111), Expect(3) = 5e-032
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G QFYS GVF+G+CGT+++H + VVGYG
Sbjct: 309 GQDFQFYSTGVFTGKCGTKLDHGVVVVGYG 398
>gb|CF391882.1|CF391882 RTDR3_10_B12.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_B12_A022 5', mRNA
sequence
Length = 696
Score = 94.1 bits (199), Expect(2) = 8e-032
Identities = 36/66 (54%), Positives = 45/66 (68%)
Frame = +1 / +1
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGL 666
C SCWAF T IE + I+TGKLVSLSEQEL+DCD + GC G + WVI+NGG+
Sbjct: 475 CGSCWAFSTTGAIEGVNAISTGKLVSLSEQELVDCDATNYGCEGGDMDYAFTWVIKNGGI 654
Query: 667 TTEANY 684
T+ +Y
Sbjct: 655 DTQNDY 672
Score = 67.5 bits (141), Expect(2) = 8e-032
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = +1 / +1
Query: 166 WQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
W + + Y + EE+ RRFQ++R N+++I A N+ + LG N+FADLT EEF Y
Sbjct: 124 WLGKHGKLYESHEEKARRFQIFRTNLDYIHAHNKNSRSRFRLGLNKFADLTNEEFKSRYF 303
Query: 346 MKGMPVRRD 372
K RD
Sbjct: 304 GKNSRQWRD 330
>gb|BG039980.1|BG039980 NXSI_104_C09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_104_C09 5' similar to Arabidopsis thaliana
sequence At4g35350 cysteine proteinase - like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 558
Score = 64.8 bits (135), Expect(4) = 9e-032
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +1 / +1
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC SCWAF T A +E I +I TG L SLSEQ L+DCD
Sbjct: 328 SCGSCWAFSTVAAVEXINQIVTGNLTSLSEQXLVDCD 438
Score = 63.8 bits (133), Expect(4) = 9e-032
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +1 / +1
Query: 166 WQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLY 342
W A + ++Y +E+Q+RF V++ N +I N GN ++ LG NQFADL+ EEF Y
Sbjct: 13 WLAQHRKAYNGLDEKQKRFSVFKDNFLYIHQHNNQGNPSFKLGLNQFADLSHEEFKATY 189
Score = 34.5 bits (69), Expect(4) = 9e-032
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1 / +1
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
Y+ CN G ++++I NGGL +E +YP
Sbjct: 445 YNXXCNGGLMDYAFQFIIDNGGLDSEDDYP 534
Score = 30.4 bits (60), Expect(4) = 9e-032
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV +K+QG
Sbjct: 283 DWREKGAVAAVKDQG 327
>gb|DR693562.1|DR693562 EST1083651 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE096 3' end, mRNA sequence
Length = 749
Score = 60.6 bits (126), Expect(5) = 1e-031
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1 / +3
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G S SG YW+VKNSWG+SWGE+G++R+ R++
Sbjct: 390 GYGSESGKDYWIVKNSWGKSWGEKGFIRLHRNI 488
Score = 53.3 bits (110), Expect(5) = 1e-031
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADS 930
G + QFY GVF+ CGT+++H +T+VGYG++S
Sbjct: 309 GRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 407
Score = 39.1 bits (79), Expect(5) = 1e-031
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1 / +1
Query: 532 ITKITTGKLVSLSEQELIDCD 594
I +I TG L SLSEQEL+DCD
Sbjct: 1 INQIVTGNLTSLSEQELVDCD 63
Score = 37.3 bits (75), Expect(5) = 1e-031
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1 / +1
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
Y+ GCN G ++++I NGGL +E +YP
Sbjct: 70 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYP 159
Score = 27.2 bits (53), Expect(5) = 1e-031
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1 / +3
Query: 1027 GLCGIALDLAYPV 1065
G+CGIA++ +YPV
Sbjct: 504 GMCGIAMEASYPV 542
>gb|DN462584.1|DN462584 EST958383 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIIO20 5' end, mRNA sequence
Length = 894
Score = 61.1 bits (127), Expect(5) = 1e-031
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +1 / +3
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G S SG YW+VKNSWG+SWGE+G++R++R++
Sbjct: 354 GYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNI 452
Score = 53.3 bits (110), Expect(5) = 1e-031
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADS 930
G + QFY GVF+ CGT+++H +T+VGYG++S
Sbjct: 273 GRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 371
Score = 46.0 bits (94), Expect(5) = 1e-031
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GCN G ++++I NGGL +E +YP H TI Y +P +
Sbjct: 33 YNQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPEND 212
Score = 27.2 bits (53), Expect(5) = 1e-031
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1 / +3
Query: 1027 GLCGIALDLAYPV 1065
G+CGIA++ +YPV
Sbjct: 468 GMCGIAMEASYPV 506
Score = 22.6 bits (43), Expect(5) = 1e-031
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1 / +3
Query: 571 EQELIDCD 594
EQEL+DCD
Sbjct: 3 EQELVDCD 26
>gb|CF402592.1|CF402592 RTWW1_21_C08.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_21_C08_A015 5', mRNA sequence
Length = 776
Score = 104 bits (222), Expect(3) = 1e-031
Identities = 41/93 (44%), Positives = 52/93 (55%)
Frame = +1 / +1
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGL 666
C SCW+F + IE I I+TG L+SLSEQEL+DCD + GC+ GY + WVIQNGG+
Sbjct: 58 CGSCWSFSSTGAIEGINAISTGDLISLSEQELVDCDSTNEGCDGGYMDYAFEWVIQNGGI 237
Query: 667 TTEANYPXXXXXXXXXXXXXXXHAATISDYVQL 765
TEA+YP TI Y +
Sbjct: 238 DTEADYPYTGEDGTCNTTKEGYKVVTIDGYTDV 336
Score = 45.1 bits (92), Expect(3) = 1e-031
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1 / +1
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRD 1014
G S + YW+VKNSWG WG GY + R+
Sbjct: 496 GYSSEDDVDYWIVKNSWGTDWGLDGYFYIERN 591
Score = 25.8 bits (50), Expect(3) = 1e-031
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1 / +1
Query: 844 QFYSGGVFSGQCGT 885
Q YSGG++ G C +
Sbjct: 418 QLYSGGIYDGDCSS 459
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 465,206,624
Number of Sequences: 355925
Number of extensions: 5313914
Number of successful extensions: 30125
Number of sequences better than 1.0e-020: 358
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 21761170155
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)