TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204317.2.1
(607 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF477622.1|CF477622 RTWW3_9_B03.b1_A022 Well-watered lob... 242 2e-063
gb|DR013586.1|DR013586 HEAT1_20_F02.b1_A029 Root at 37 C fo... 242 2e-063
gb|DR019596.1|DR019596 STRS1_31_D05.b1_A034 Shoot tip pitch... 242 2e-063
gb|DR019640.1|DR019640 STRS1_31_H11.b1_A034 Shoot tip pitch... 242 2e-063
gb|DR019670.1|DR019670 STRS1_31_D05.g1_A034 Shoot tip pitch... 242 2e-063
gb|DR052378.1|DR052378 RTCA1_4_F07.b1_A029 Roots minus calc... 242 2e-063
gb|DR052459.1|DR052459 RTCA1_4_F07.g1_A029 Roots minus calc... 242 2e-063
gb|DR055729.1|DR055729 RTCA1_25_C02.g1_A029 Roots minus cal... 242 2e-063
gb|DR081506.1|DR081506 RTFEPL1_30_D11.b1_A029 Roots plus ad... 242 2e-063
gb|DR093835.1|DR093835 STRR1_10_E06.g1_A033 Stem Response R... 242 2e-063
gb|DR094103.1|DR094103 STRR1_12_B03.g1_A033 Stem Response R... 242 2e-063
gb|DR164307.1|DR164307 RTFE1_48_D09.b1_A029 Roots minus iro... 242 2e-063
gb|DR024579.1|DR024579 STRS1_66_A03.b1_A034 Shoot tip pitch... 239 1e-062
gb|CX652294.1|CX652294 COLD1_58_E05.b1_A029 Root cold Pinus... 218 2e-056
gb|DR111231.1|DR111231 RTS1_16_F03.b1_A029 Roots minus sulf... 206 9e-053
gb|DR110861.1|DR110861 RTS1_13_B02.g1_A029 Roots minus sulf... 147 8e-035
gb|AW010487.1|AW010487 ST07D06 Pine TriplEx shoot tip libra... 126 5e-033
gb|CO169436.1|CO169436 NDL1_7_C03.b1_A029 Needles control P... 137 6e-032
gb|DR094032.1|DR094032 STRR1_12_B03.b1_A033 Stem Response R... 137 6e-032
gb|DR048711.1|DR048711 RTBOR1_10_E10.g1_A029 Roots plus add... 71 1e-030
gb|DR019869.1|DR019869 STRS1_33_B04.b1_A034 Shoot tip pitch... 75 1e-029
gb|CO164776.1|CO164776 FLD1_50_F04.b1_A029 Root flooded Pin... 75 1e-029
gb|AF072736.1|AF072736 Pinus contorta beta-glucosidase mRNA... 71 9e-029
gb|CX712929.1|CX712929 RTPQ1_5_F12.g1_A032 Roots treated wi... 70 9e-029
gb|CO162557.1|CO162557 FLD1_36_C02.b1_A029 Root flooded Pin... 72 9e-029
gb|CO162371.1|CO162371 FLD1_34_H05.g1_A029 Root flooded Pin... 71 1e-028
gb|DR080921.1|DR080921 RTFEPL1_26_D08.b1_A029 Roots plus ad... 71 1e-028
gb|BX254352.1|BX254352 BX254352 Pinus pinaster differenciat... 77 2e-028
gb|DR014803.1|DR014803 HEAT1_51_E12.g1_A029 Root at 37 C fo... 70 2e-028
gb|BX250956.1|BX250956 BX250956 Pinus pinaster differenciat... 70 1e-027
dbj|BD224353.1| Materials and methods for the modification ... 122 2e-027
dbj|BD224416.1| Materials and methods for the modification ... 122 2e-027
gb|AW042637.1|AW042637 ST24C01 Pine TriplEx shoot tip libra... 68 1e-026
gb|CF668848.1|CF668848 RTCNT1_39_C01.b1_A029 Root control P... 71 3e-026
gb|CX646974.1|CX646974 COLD1_12_D12.g1_A029 Root cold Pinus... 68 7e-025
gb|BX679902.1|BX679902 BX679902 RS Pinus pinaster cDNA clon... 70 1e-024
gb|BG039942.1|BG039942 NXSI_101_H03_F NXSI (Nsf Xylem Side ... 72 1e-023
gb|CO361958.1|CO361958 NDL2_8_E08.b1_A029 Needles control 2... 72 3e-023
gb|DR095084.1|DR095084 STRR1_18_E04.g1_A033 Stem Response R... 70 8e-023
gb|CX652916.1|CX652916 COLD1_62_F11.b1_A029 Root cold Pinus... 70 8e-023
gb|CX652380.1|CX652380 COLD1_58_E05.g1_A029 Root cold Pinus... 86 2e-021
gb|CO158951.1|CO158951 FLD1_10_G08.b1_A029 Root flooded Pin... 95 2e-021
gb|DR054591.1|DR054591 RTCA1_18_G02.b1_A029 Roots minus cal... 101 4e-021
>gb|CF477622.1|CF477622 RTWW3_9_B03.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_9_B03_A022 3', mRNA sequence
Length = 667
Score = 242 bits (522), Expect = 2e-063
Identities = 95/138 (68%), Positives = 105/138 (76%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT
Sbjct: 121 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 300
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+ G L A++ GAN VGYFAWSLLDNFEWK GYTSRFG+VYVDF
Sbjct: 301 LPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDF 480
Query: 246 RTLRRYPKSSAYWFRDVI 193
TL+RYPK SAYWF ++
Sbjct: 481 TTLKRYPKMSAYWFSKLL 534
Score = 167 bits (360), Expect = 5e-041
Identities = 81/127 (63%), Positives = 89/127 (70%)
Frame = +2 / -3
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 521 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 342
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGP 565
** TL S +P +VT PGSSIPFS+R IVG P S T VTALY PQGTM*SQ EFALGP
Sbjct: 341 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 162
Query: 566 IGTPSRS 586
IGTP R+
Sbjct: 161 IGTPLRA 141
Score = 100 bits (214), Expect = 7e-021
Identities = 42/132 (31%), Positives = 81/132 (61%)
Frame = +1 / -2
Query: 193 DDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLG 372
++ EP+ L ++ + ++ ++ ++ V LPL++++QRP +VSH + + Q+
Sbjct: 534 EEFREPIS*HLWISLQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQIL 355
Query: 373 DVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*V 552
+A +V +P + + V+RVVH++ + H ++++ V DG V +PRH+V+P+ V
Sbjct: 354 QIAFIVVNPDGIIQSCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGV 175
Query: 553 RPWSNRHTVAFI 588
RPWSNRH++A I
Sbjct: 174 RPWSNRHSIASI 139
>gb|DR013586.1|DR013586 HEAT1_20_F02.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_20_F02_A029 3', mRNA sequence
Length = 740
Score = 242 bits (522), Expect = 2e-063
Identities = 95/138 (68%), Positives = 105/138 (76%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT
Sbjct: 55 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 234
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+ G L A++ GAN VGYFAWSLLDNFEWK GYTSRFG+VYVDF
Sbjct: 235 LPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDF 414
Query: 246 RTLRRYPKSSAYWFRDVI 193
TL+RYPK SAYWF ++
Sbjct: 415 TTLKRYPKMSAYWFSKLL 468
Score = 167 bits (360), Expect = 5e-041
Identities = 81/127 (63%), Positives = 89/127 (70%)
Frame = +2 / -1
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 455 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 276
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGP 565
** TL S +P +VT PGSSIPFS+R IVG P S T VTALY PQGTM*SQ EFALGP
Sbjct: 275 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 96
Query: 566 IGTPSRS 586
IGTP R+
Sbjct: 95 IGTPLRA 75
Score = 100 bits (214), Expect = 7e-021
Identities = 42/132 (31%), Positives = 81/132 (61%)
Frame = +1 / -3
Query: 193 DDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLG 372
++ EP+ L ++ + ++ ++ ++ V LPL++++QRP +VSH + + Q+
Sbjct: 468 EEFREPIS*HLWISLQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQIL 289
Query: 373 DVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*V 552
+A +V +P + + V+RVVH++ + H ++++ V DG V +PRH+V+P+ V
Sbjct: 288 QIAFIVVNPDGIIQSCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGV 109
Query: 553 RPWSNRHTVAFI 588
RPWSNRH++A I
Sbjct: 108 RPWSNRHSIASI 73
>gb|DR019596.1|DR019596 STRS1_31_D05.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_D05_A034 3', mRNA sequence
Length = 865
Score = 242 bits (522), Expect = 2e-063
Identities = 95/138 (68%), Positives = 105/138 (76%)
Frame = -2 / -1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT
Sbjct: 541 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 362
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+ G L A++ GAN VGYFAWSLLDNFEWK GYTSRFG+VYVDF
Sbjct: 361 LPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDF 182
Query: 246 RTLRRYPKSSAYWFRDVI 193
TL+RYPK SAYWF ++
Sbjct: 181 TTLKRYPKMSAYWFSKLL 128
Score = 167 bits (360), Expect = 5e-041
Identities = 81/127 (63%), Positives = 89/127 (70%)
Frame = +2 / +3
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 141 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 320
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGP 565
** TL S +P +VT PGSSIPFS+R IVG P S T VTALY PQGTM*SQ EFALGP
Sbjct: 321 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 500
Query: 566 IGTPSRS 586
IGTP R+
Sbjct: 501 IGTPLRA 521
Score = 100 bits (214), Expect = 7e-021
Identities = 42/132 (31%), Positives = 81/132 (61%)
Frame = +1 / +2
Query: 193 DDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLG 372
++ EP+ L ++ + ++ ++ ++ V LPL++++QRP +VSH + + Q+
Sbjct: 128 EEFREPIS*HLWISLQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQIL 307
Query: 373 DVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*V 552
+A +V +P + + V+RVVH++ + H ++++ V DG V +PRH+V+P+ V
Sbjct: 308 QIAFIVVNPDGIIQSCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGV 487
Query: 553 RPWSNRHTVAFI 588
RPWSNRH++A I
Sbjct: 488 RPWSNRHSIASI 523
>gb|DR019640.1|DR019640 STRS1_31_H11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_H11_A034 3', mRNA sequence
Length = 794
Score = 242 bits (522), Expect = 2e-063
Identities = 95/138 (68%), Positives = 105/138 (76%)
Frame = -2 / +2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT
Sbjct: 248 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 427
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+ G L A++ GAN VGYFAWSLLDNFEWK GYTSRFG+VYVDF
Sbjct: 428 LPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDF 607
Query: 246 RTLRRYPKSSAYWFRDVI 193
TL+RYPK SAYWF ++
Sbjct: 608 TTLKRYPKMSAYWFSKLL 661
Score = 167 bits (360), Expect = 5e-041
Identities = 81/127 (63%), Positives = 89/127 (70%)
Frame = +2 / -3
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 648 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 469
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGP 565
** TL S +P +VT PGSSIPFS+R IVG P S T VTALY PQGTM*SQ EFALGP
Sbjct: 468 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 289
Query: 566 IGTPSRS 586
IGTP R+
Sbjct: 288 IGTPLRA 268
Score = 100 bits (214), Expect = 7e-021
Identities = 42/132 (31%), Positives = 81/132 (61%)
Frame = +1 / -2
Query: 193 DDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLG 372
++ EP+ L ++ + ++ ++ ++ V LPL++++QRP +VSH + + Q+
Sbjct: 661 EEFREPIS*HLWISLQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQIL 482
Query: 373 DVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*V 552
+A +V +P + + V+RVVH++ + H ++++ V DG V +PRH+V+P+ V
Sbjct: 481 QIAFIVVNPDGIIQSCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGV 302
Query: 553 RPWSNRHTVAFI 588
RPWSNRH++A I
Sbjct: 301 RPWSNRHSIASI 266
>gb|DR019670.1|DR019670 STRS1_31_D05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_D05_A034 5', mRNA sequence
Length = 756
Score = 242 bits (522), Expect = 2e-063
Identities = 95/138 (68%), Positives = 105/138 (76%)
Frame = -2 / -1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT
Sbjct: 513 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 334
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+ G L A++ GAN VGYFAWSLLDNFEWK GYTSRFG+VYVDF
Sbjct: 333 LPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDF 154
Query: 246 RTLRRYPKSSAYWFRDVI 193
TL+RYPK SAYWF ++
Sbjct: 153 TTLKRYPKMSAYWFSKLL 100
Score = 167 bits (360), Expect = 5e-041
Identities = 81/127 (63%), Positives = 89/127 (70%)
Frame = +2 / +2
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 113 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 292
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGP 565
** TL S +P +VT PGSSIPFS+R IVG P S T VTALY PQGTM*SQ EFALGP
Sbjct: 293 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 472
Query: 566 IGTPSRS 586
IGTP R+
Sbjct: 473 IGTPLRA 493
Score = 100 bits (214), Expect = 7e-021
Identities = 42/132 (31%), Positives = 81/132 (61%)
Frame = +1 / +1
Query: 193 DDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLG 372
++ EP+ L ++ + ++ ++ ++ V LPL++++QRP +VSH + + Q+
Sbjct: 100 EEFREPIS*HLWISLQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQIL 279
Query: 373 DVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*V 552
+A +V +P + + V+RVVH++ + H ++++ V DG V +PRH+V+P+ V
Sbjct: 280 QIAFIVVNPDGIIQSCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGV 459
Query: 553 RPWSNRHTVAFI 588
RPWSNRH++A I
Sbjct: 460 RPWSNRHSIASI 495
>gb|DR052378.1|DR052378 RTCA1_4_F07.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_4_F07_A029 3', mRNA sequence
Length = 865
Score = 242 bits (522), Expect = 2e-063
Identities = 95/138 (68%), Positives = 105/138 (76%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT
Sbjct: 319 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 498
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+ G L A++ GAN VGYFAWSLLDNFEWK GYTSRFG+VYVDF
Sbjct: 499 LPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDF 678
Query: 246 RTLRRYPKSSAYWFRDVI 193
TL+RYPK SAYWF ++
Sbjct: 679 TTLKRYPKMSAYWFSKLL 732
Score = 167 bits (360), Expect = 5e-041
Identities = 81/127 (63%), Positives = 89/127 (70%)
Frame = +2 / -3
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 719 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 540
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGP 565
** TL S +P +VT PGSSIPFS+R IVG P S T VTALY PQGTM*SQ EFALGP
Sbjct: 539 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 360
Query: 566 IGTPSRS 586
IGTP R+
Sbjct: 359 IGTPLRA 339
Score = 100 bits (214), Expect = 7e-021
Identities = 42/132 (31%), Positives = 81/132 (61%)
Frame = +1 / -2
Query: 193 DDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLG 372
++ EP+ L ++ + ++ ++ ++ V LPL++++QRP +VSH + + Q+
Sbjct: 732 EEFREPIS*HLWISLQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQIL 553
Query: 373 DVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*V 552
+A +V +P + + V+RVVH++ + H ++++ V DG V +PRH+V+P+ V
Sbjct: 552 QIAFIVVNPDGIIQSCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGV 373
Query: 553 RPWSNRHTVAFI 588
RPWSNRH++A I
Sbjct: 372 RPWSNRHSIASI 337
>gb|DR052459.1|DR052459 RTCA1_4_F07.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_4_F07_A029 5', mRNA sequence
Length = 932
Score = 242 bits (522), Expect = 2e-063
Identities = 95/138 (68%), Positives = 105/138 (76%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT
Sbjct: 460 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 639
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+ G L A++ GAN VGYFAWSLLDNFEWK GYTSRFG+VYVDF
Sbjct: 640 LPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDF 819
Query: 246 RTLRRYPKSSAYWFRDVI 193
TL+RYPK SAYWF ++
Sbjct: 820 TTLKRYPKMSAYWFSKLL 873
Score = 167 bits (360), Expect = 5e-041
Identities = 81/127 (63%), Positives = 89/127 (70%)
Frame = +2 / -1
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 860 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 681
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGP 565
** TL S +P +VT PGSSIPFS+R IVG P S T VTALY PQGTM*SQ EFALGP
Sbjct: 680 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 501
Query: 566 IGTPSRS 586
IGTP R+
Sbjct: 500 IGTPLRA 480
Score = 100 bits (214), Expect = 7e-021
Identities = 42/132 (31%), Positives = 81/132 (61%)
Frame = +1 / -3
Query: 193 DDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLG 372
++ EP+ L ++ + ++ ++ ++ V LPL++++QRP +VSH + + Q+
Sbjct: 873 EEFREPIS*HLWISLQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQIL 694
Query: 373 DVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*V 552
+A +V +P + + V+RVVH++ + H ++++ V DG V +PRH+V+P+ V
Sbjct: 693 QIAFIVVNPDGIIQSCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGV 514
Query: 553 RPWSNRHTVAFI 588
RPWSNRH++A I
Sbjct: 513 RPWSNRHSIASI 478
>gb|DR055729.1|DR055729 RTCA1_25_C02.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_25_C02_A029 5', mRNA sequence
Length = 687
Score = 242 bits (522), Expect = 2e-063
Identities = 95/138 (68%), Positives = 105/138 (76%)
Frame = -2 / -3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT
Sbjct: 514 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 335
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+ G L A++ GAN VGYFAWSLLDNFEWK GYTSRFG+VYVDF
Sbjct: 334 LPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDF 155
Query: 246 RTLRRYPKSSAYWFRDVI 193
TL+RYPK SAYWF ++
Sbjct: 154 TTLKRYPKMSAYWFSKLL 101
Score = 167 bits (360), Expect = 5e-041
Identities = 81/127 (63%), Positives = 89/127 (70%)
Frame = +2 / +3
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 114 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 293
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGP 565
** TL S +P +VT PGSSIPFS+R IVG P S T VTALY PQGTM*SQ EFALGP
Sbjct: 294 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 473
Query: 566 IGTPSRS 586
IGTP R+
Sbjct: 474 IGTPLRA 494
Score = 100 bits (214), Expect = 7e-021
Identities = 42/132 (31%), Positives = 81/132 (61%)
Frame = +1 / +2
Query: 193 DDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLG 372
++ EP+ L ++ + ++ ++ ++ V LPL++++QRP +VSH + + Q+
Sbjct: 101 EEFREPIS*HLWISLQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQIL 280
Query: 373 DVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*V 552
+A +V +P + + V+RVVH++ + H ++++ V DG V +PRH+V+P+ V
Sbjct: 281 QIAFIVVNPDGIIQSCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGV 460
Query: 553 RPWSNRHTVAFI 588
RPWSNRH++A I
Sbjct: 461 RPWSNRHSIASI 496
>gb|DR081506.1|DR081506 RTFEPL1_30_D11.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_30_D11_A029 3', mRNA sequence
Length = 761
Score = 242 bits (522), Expect = 2e-063
Identities = 95/138 (68%), Positives = 105/138 (76%)
Frame = -2 / +2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT
Sbjct: 95 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 274
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+ G L A++ GAN VGYFAWSLLDNFEWK GYTSRFG+VYVDF
Sbjct: 275 LPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDF 454
Query: 246 RTLRRYPKSSAYWFRDVI 193
TL+RYPK SAYWF ++
Sbjct: 455 TTLKRYPKMSAYWFSKLL 508
Score = 167 bits (360), Expect = 5e-041
Identities = 81/127 (63%), Positives = 89/127 (70%)
Frame = +2 / -3
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 495 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 316
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGP 565
** TL S +P +VT PGSSIPFS+R IVG P S T VTALY PQGTM*SQ EFALGP
Sbjct: 315 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 136
Query: 566 IGTPSRS 586
IGTP R+
Sbjct: 135 IGTPLRA 115
Score = 100 bits (214), Expect = 7e-021
Identities = 42/132 (31%), Positives = 81/132 (61%)
Frame = +1 / -2
Query: 193 DDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLG 372
++ EP+ L ++ + ++ ++ ++ V LPL++++QRP +VSH + + Q+
Sbjct: 508 EEFREPIS*HLWISLQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQIL 329
Query: 373 DVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*V 552
+A +V +P + + V+RVVH++ + H ++++ V DG V +PRH+V+P+ V
Sbjct: 328 QIAFIVVNPDGIIQSCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGV 149
Query: 553 RPWSNRHTVAFI 588
RPWSNRH++A I
Sbjct: 148 RPWSNRHSIASI 113
>gb|DR093835.1|DR093835 STRR1_10_E06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_10_E06_A033 5', mRNA sequence
Length = 788
Score = 242 bits (522), Expect = 2e-063
Identities = 95/138 (68%), Positives = 105/138 (76%)
Frame = -2 / -1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT
Sbjct: 530 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 351
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+ G L A++ GAN VGYFAWSLLDNFEWK GYTSRFG+VYVDF
Sbjct: 350 LPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDF 171
Query: 246 RTLRRYPKSSAYWFRDVI 193
TL+RYPK SAYWF ++
Sbjct: 170 TTLKRYPKMSAYWFSKLL 117
Score = 167 bits (360), Expect = 5e-041
Identities = 81/127 (63%), Positives = 89/127 (70%)
Frame = +2 / +1
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 130 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 309
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGP 565
** TL S +P +VT PGSSIPFS+R IVG P S T VTALY PQGTM*SQ EFALGP
Sbjct: 310 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 489
Query: 566 IGTPSRS 586
IGTP R+
Sbjct: 490 IGTPLRA 510
Score = 100 bits (214), Expect = 7e-021
Identities = 42/132 (31%), Positives = 81/132 (61%)
Frame = +1 / +3
Query: 193 DDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLG 372
++ EP+ L ++ + ++ ++ ++ V LPL++++QRP +VSH + + Q+
Sbjct: 117 EEFREPIS*HLWISLQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQIL 296
Query: 373 DVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*V 552
+A +V +P + + V+RVVH++ + H ++++ V DG V +PRH+V+P+ V
Sbjct: 297 QIAFIVVNPDGIIQSCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGV 476
Query: 553 RPWSNRHTVAFI 588
RPWSNRH++A I
Sbjct: 477 RPWSNRHSIASI 512
>gb|DR094103.1|DR094103 STRR1_12_B03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_12_B03_A033 5', mRNA sequence
Length = 864
Score = 242 bits (522), Expect = 2e-063
Identities = 95/138 (68%), Positives = 105/138 (76%)
Frame = -2 / -1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT
Sbjct: 489 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 310
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+ G L A++ GAN VGYFAWSLLDNFEWK GYTSRFG+VYVDF
Sbjct: 309 LPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDF 130
Query: 246 RTLRRYPKSSAYWFRDVI 193
TL+RYPK SAYWF ++
Sbjct: 129 TTLKRYPKMSAYWFSKLL 76
Score = 167 bits (360), Expect = 5e-041
Identities = 81/127 (63%), Positives = 89/127 (70%)
Frame = +2 / +2
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 89 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 268
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGP 565
** TL S +P +VT PGSSIPFS+R IVG P S T VTALY PQGTM*SQ EFALGP
Sbjct: 269 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 448
Query: 566 IGTPSRS 586
IGTP R+
Sbjct: 449 IGTPLRA 469
Score = 100 bits (214), Expect = 7e-021
Identities = 42/132 (31%), Positives = 81/132 (61%)
Frame = +1 / +1
Query: 193 DDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLG 372
++ EP+ L ++ + ++ ++ ++ V LPL++++QRP +VSH + + Q+
Sbjct: 76 EEFREPIS*HLWISLQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQIL 255
Query: 373 DVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*V 552
+A +V +P + + V+RVVH++ + H ++++ V DG V +PRH+V+P+ V
Sbjct: 256 QIAFIVVNPDGIIQSCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGV 435
Query: 553 RPWSNRHTVAFI 588
RPWSNRH++A I
Sbjct: 436 RPWSNRHSIASI 471
>gb|DR164307.1|DR164307 RTFE1_48_D09.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_48_D09_A029 3', mRNA sequence
Length = 868
Score = 242 bits (522), Expect = 2e-063
Identities = 95/138 (68%), Positives = 105/138 (76%)
Frame = -2 / +3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT
Sbjct: 330 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 509
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+ G L A++ GAN VGYFAWSLLDNFEWK GYTSRFG+VYVDF
Sbjct: 510 LPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDF 689
Query: 246 RTLRRYPKSSAYWFRDVI 193
TL+RYPK SAYWF ++
Sbjct: 690 TTLKRYPKMSAYWFSKLL 743
Score = 167 bits (360), Expect = 5e-041
Identities = 81/127 (63%), Positives = 89/127 (70%)
Frame = +2 / -1
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 730 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 551
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGP 565
** TL S +P +VT PGSSIPFS+R IVG P S T VTALY PQGTM*SQ EFALGP
Sbjct: 550 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 371
Query: 566 IGTPSRS 586
IGTP R+
Sbjct: 370 IGTPLRA 350
Score = 100 bits (214), Expect = 7e-021
Identities = 42/132 (31%), Positives = 81/132 (61%)
Frame = +1 / -3
Query: 193 DDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLG 372
++ EP+ L ++ + ++ ++ ++ V LPL++++QRP +VSH + + Q+
Sbjct: 743 EEFREPIS*HLWISLQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQIL 564
Query: 373 DVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*V 552
+A +V +P + + V+RVVH++ + H ++++ V DG V +PRH+V+P+ V
Sbjct: 563 QIAFIVVNPDGIIQSCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGV 384
Query: 553 RPWSNRHTVAFI 588
RPWSNRH++A I
Sbjct: 383 RPWSNRHSIASI 348
>gb|DR024579.1|DR024579 STRS1_66_A03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_66_A03_A034 3', mRNA sequence
Length = 605
Score = 239 bits (516), Expect = 1e-062
Identities = 94/138 (68%), Positives = 104/138 (75%)
Frame = -2 / +2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT
Sbjct: 53 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 232
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+ G L A++ GAN VGYFAWSLLDNFEWK GYTSRFG+VYVDF
Sbjct: 233 LPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDF 412
Query: 246 RTLRRYPKSSAYWFRDVI 193
T +RYPK SAYWF ++
Sbjct: 413 TTRKRYPKMSAYWFSKLL 466
Score = 167 bits (360), Expect = 5e-041
Identities = 81/127 (63%), Positives = 89/127 (70%)
Frame = +2 / -3
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 453 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 274
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGP 565
** TL S +P +VT PGSSIPFS+R IVG P S T VTALY PQGTM*SQ EFALGP
Sbjct: 273 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 94
Query: 566 IGTPSRS 586
IGTP R+
Sbjct: 93 IGTPLRA 73
>gb|CX652294.1|CX652294 COLD1_58_E05.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_58_E05_A029 3', mRNA sequence
Length = 502
Score = 218 bits (471), Expect = 2e-056
Identities = 86/123 (69%), Positives = 95/123 (77%)
Frame = -2 / +3
Query: 561 PRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXX 382
PRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT+ G
Sbjct: 3 PRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYK 182
Query: 381 XXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFR 202
L A++ GAN VGYFAWSLLDNFEWK GYTSRFG+VYVDF TL+RYPK SAYWF
Sbjct: 183 SYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFS 362
Query: 201 DVI 193
++
Sbjct: 363 KLL 371
Score = 152 bits (327), Expect = 2e-036
Identities = 75/119 (63%), Positives = 82/119 (68%)
Frame = +2 / -1
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 358 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 179
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
** TL S +P +VT PGSSIPFS+R IVG P S T VTALY PQGTM*SQ EFALG
Sbjct: 178 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALG 2
>gb|DR111231.1|DR111231 RTS1_16_F03.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_16_F03_A029 3', mRNA sequence
Length = 628
Score = 206 bits (445), Expect = 9e-053
Identities = 81/118 (68%), Positives = 90/118 (76%)
Frame = -2 / +3
Query: 546 DWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAE 367
+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT+ G
Sbjct: 3 NWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQN 182
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
L A++ GAN VGYFAWSLLDNFEWK GYTSRFG+VYVDF TL+RYPK SAYWF ++
Sbjct: 183 LINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLL 356
Score = 142 bits (304), Expect = 3e-033
Identities = 70/113 (61%), Positives = 77/113 (68%)
Frame = +2 / -1
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 343 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 164
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQ 544
** TL S +P +VT PGSSIPFS+R IVG P S T VTALY PQGTM*SQ
Sbjct: 163 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQ 5
>gb|DR110861.1|DR110861 RTS1_13_B02.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_13_B02_A029 5', mRNA sequence
Length = 490
Score = 147 bits (315), Expect = 8e-035
Identities = 59/94 (62%), Positives = 67/94 (71%)
Frame = -2 / +1
Query: 474 TMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFE 295
TM+LSENGMDDPGNVT+ G L A++ GAN VGYFAWSLLDNFE
Sbjct: 13 TMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFE 192
Query: 294 WKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
WK GYTSRFG+VYVDF TL+RYPK SAYWF ++
Sbjct: 193 WKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLL 294
Score = 108 bits (231), Expect = 3e-023
Identities = 53/90 (58%), Positives = 60/90 (66%)
Frame = +2 / -3
Query: 206 NQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR 385
NQ A++ G R V+KST*T PN +VYP FHSKLSS D AKYPT AP A *L
Sbjct: 281 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 102
Query: 386 **ATLAASRTPWATVTLPGSSIPFSDRSIV 475
** TL S +P +VT PGSSIPFS+R IV
Sbjct: 101 **LTLMVSFSPAGSVTFPGSSIPFSERIIV 12
>gb|AW010487.1|AW010487 ST07D06 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST07D06, mRNA sequence
Length = 811
Score = 126 bits (270), Expect(2) = 5e-033
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = -2 / +1
Query: 576 GVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQG 415
GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT+ G
Sbjct: 277 GVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAG 438
Score = 34.5 bits (69), Expect(2) = 5e-033
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2 / +2
Query: 345 GANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
G VGY LL FEW+ Y R G+ YV F
Sbjct: 512 GKMWVGYLHGPLLGKFEWESRYXPRVGVGYVGF 610
>gb|CO169436.1|CO169436 NDL1_7_C03.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_C03_A029 3', mRNA sequence
Length = 795
Score = 137 bits (294), Expect = 6e-032
Identities = 52/64 (81%), Positives = 56/64 (87%)
Frame = -2 / -2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT
Sbjct: 260 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 81
Query: 426 VAQG 415
+ G
Sbjct: 80 LPAG 69
>gb|DR094032.1|DR094032 STRR1_12_B03.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_12_B03_A033 3', mRNA sequence
Length = 910
Score = 137 bits (294), Expect = 6e-032
Identities = 52/64 (81%), Positives = 56/64 (87%)
Frame = -2 / -2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDDPGNVT
Sbjct: 249 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 70
Query: 426 VAQG 415
+ G
Sbjct: 69 LPAG 58
>gb|DR048711.1|DR048711 RTBOR1_10_E10.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_10_E10_A029 5', mRNA sequence
Length = 667
Score = 70.7 bits (148), Expect(3) = 1e-030
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = -2 / +3
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
L AI GA+ GYFAWSL+DNFEW GYT RFGLV+VD++
Sbjct: 222 LAEAIREGADVRGYFAWSLIDNFEWGQGYTKRFGLVFVDYK 344
Score = 66.6 bits (139), Expect(3) = 1e-030
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = -2 / +3
Query: 576 GVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
G IG RA S+WLYIVPWG K + ++ E+Y P + ++ENGMDD
Sbjct: 6 GNTIGERAASEWLYIVPWGFRKVLKWLTERYNRPPIYVTENGMDD 140
Score = 33.6 bits (67), Expect(3) = 1e-030
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -2 / +3
Query: 240 LRRYPKSSAYWFRDVIAGSN 181
L+RYPKSSA+WF + G++
Sbjct: 351 LKRYPKSSAHWFTSFLHGTD 410
>gb|DR019869.1|DR019869 STRS1_33_B04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_33_B04_A034 3', mRNA sequence
Length = 868
Score = 75.3 bits (158), Expect(3) = 1e-029
Identities = 25/53 (47%), Positives = 39/53 (73%)
Frame = -2 / +2
Query: 582 RDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTV 424
++G IG +A+S WLYIVP G+ + Y+K +Y NP ++++ENGMDDP N+ +
Sbjct: 269 KNGRAIGDKASSAWLYIVPHGIRSLMNYIKRRYNNPPVIITENGMDDPNNILI 427
Score = 66.1 bits (138), Expect(3) = 1e-029
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = -2 / +2
Query: 351 DGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
+ G N GYF WSLLDN+EW GYTSRFGL +VD++
Sbjct: 509 EDGCNVGGYFVWSLLDNWEWAAGYTSRFGLYFVDYK 616
Score = 25.8 bits (50), Expect(3) = 1e-029
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / +2
Query: 240 LRRYPKSSAYWFR 202
L RYPK+S WF+
Sbjct: 623 LTRYPKASVQWFK 661
>gb|CO164776.1|CO164776 FLD1_50_F04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_50_F04_A029 3', mRNA sequence
Length = 751
Score = 75.3 bits (158), Expect(3) = 1e-029
Identities = 25/53 (47%), Positives = 39/53 (73%)
Frame = -2 / +1
Query: 582 RDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTV 424
++G IG +A+S WLYIVP G+ + Y+K +Y NP ++++ENGMDDP N+ +
Sbjct: 151 KNGRAIGDKASSAWLYIVPHGIRSLMNYIKRRYNNPPVIITENGMDDPNNILI 309
Score = 66.1 bits (138), Expect(3) = 1e-029
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = -2 / +1
Query: 351 DGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
+ G N GYF WSLLDN+EW GYTSRFGL +VD++
Sbjct: 391 EDGCNVGGYFVWSLLDNWEWAAGYTSRFGLYFVDYK 498
Score = 25.8 bits (50), Expect(3) = 1e-029
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / +1
Query: 240 LRRYPKSSAYWFR 202
L RYPK+S WF+
Sbjct: 505 LTRYPKASVQWFK 543
>gb|AF072736.1|AF072736 Pinus contorta beta-glucosidase mRNA, complete cds
Length = 1909
Score = 70.7 bits (148), Expect(3) = 9e-029
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -2 / +3
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
L AAI G++ GYF WSLLDNFEW GYT RFGL +VDF
Sbjct: 1503 LSAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDF 1622
Score = 63.8 bits (133), Expect(3) = 9e-029
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -2 / +3
Query: 585 ERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENG 451
ER GV IG R D L++VP G+ K V YVKE Y NPT++++ENG
Sbjct: 1278 ERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIIAENG 1412
Score = 29.9 bits (59), Expect(3) = 9e-029
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2 / +3
Query: 237 RRYPKSSAYWFRDVIAGSN*DHVRWPQSI* 148
+RYPK SA WFR + + +R SI*
Sbjct: 1635 KRYPKLSAQWFRQFLQHDDQGSIRSSSSI* 1724
>gb|CX712929.1|CX712929 RTPQ1_5_F12.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_5_F12_A032 5', mRNA sequence
Length = 836
Score = 70.3 bits (147), Expect(3) = 9e-029
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -2 / +3
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
L AAI G++ GYF WSLLDNFEW GYT RFGL +VDF
Sbjct: 462 LTAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDF 581
Score = 63.8 bits (133), Expect(3) = 9e-029
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -2 / +3
Query: 585 ERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENG 451
ER GV IG R D L++VP G+ K V YVKE Y NPT++++ENG
Sbjct: 237 ERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 371
Score = 30.4 bits (60), Expect(3) = 9e-029
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2 / +3
Query: 237 RRYPKSSAYWFRDVIAGSN*DHVRWPQSI* 148
+RYPK SA WFR + + +R SI*
Sbjct: 594 KRYPKLSAQWFRQFLQHDDQGSIRGSSSI* 683
>gb|CO162557.1|CO162557 FLD1_36_C02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_36_C02_A029 3', mRNA sequence
Length = 649
Score = 72.1 bits (151), Expect(3) = 9e-029
Identities = 24/53 (45%), Positives = 39/53 (73%)
Frame = -2 / +2
Query: 582 RDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTV 424
+DG IG +A+S WLYIVP G+ + Y+K++Y NP ++++ENGMDD ++ +
Sbjct: 8 KDGKAIGDKASSIWLYIVPQGIRSLMNYIKQRYNNPPVIITENGMDDSNDIFI 166
Score = 66.1 bits (138), Expect(3) = 9e-029
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = -2 / +2
Query: 351 DGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
+ G N GYF WSLLDN+EW GYTSRFGL +VD++
Sbjct: 248 EDGCNVGGYFVWSLLDNWEWAAGYTSRFGLYFVDYK 355
Score = 26.3 bits (51), Expect(3) = 9e-029
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2 / +2
Query: 240 LRRYPKSSAYWFRDVIA 190
L RYPK S WF+ +A
Sbjct: 362 LTRYPKDSVQWFKCFLA 412
>gb|CO162371.1|CO162371 FLD1_34_H05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_34_H05_A029 5', mRNA sequence
Length = 738
Score = 70.7 bits (148), Expect(3) = 1e-028
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -2 / -3
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
L AAI G++ GYF WSLLDNFEW GYT RFGL +VDF
Sbjct: 508 LNAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDF 389
Score = 63.8 bits (133), Expect(3) = 1e-028
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -2 / -3
Query: 585 ERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENG 451
ER GV IG R D L++VP G+ K V YVKE Y NPT++++ENG
Sbjct: 733 ERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 599
Score = 29.5 bits (58), Expect(3) = 1e-028
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2 / -3
Query: 237 RRYPKSSAYWFRDVIAGSN*DHVRWPQSI* 148
+RYPK SA WFR + + +R SI*
Sbjct: 376 KRYPKLSAQWFRQFLQHDDQRSIRSSSSI* 287
>gb|DR080921.1|DR080921 RTFEPL1_26_D08.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_26_D08_A029 3', mRNA sequence
Length = 707
Score = 70.7 bits (148), Expect(3) = 1e-028
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -2 / +2
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
L AAI G++ GYF WSLLDNFEW GYT RFGL +VDF
Sbjct: 305 LNAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDF 424
Score = 63.8 bits (133), Expect(3) = 1e-028
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -2 / +2
Query: 585 ERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENG 451
ER GV IG R D L++VP G+ K V YVKE Y NPT++++ENG
Sbjct: 80 ERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 214
Score = 29.5 bits (58), Expect(3) = 1e-028
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2 / +2
Query: 237 RRYPKSSAYWFRDVIAGSN*DHVRWPQSI* 148
+RYPK SA WFR + + +R SI*
Sbjct: 437 KRYPKLSAQWFRQFLQHDDQRSIRSSSSI* 526
>gb|BX254352.1|BX254352 BX254352 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP097C12, mRNA sequence
Length = 664
Score = 77.1 bits (162), Expect(3) = 2e-028
Identities = 25/54 (46%), Positives = 40/54 (74%)
Frame = -2 / +2
Query: 582 RDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVA 421
R GV IG R S WLY+VPWG+ ++ Y+K++Y NP ++++ENG+DDP + ++
Sbjct: 98 RKGVMIGERGASRWLYVVPWGIRSSMIYIKQRYDNPPIIITENGIDDPNSPLIS 259
Score = 58.8 bits (122), Expect(3) = 2e-028
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = -2 / +2
Query: 345 GANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
G + GYF WSLLDN+EW G+T RFGL +VD++
Sbjct: 344 GCDVRGYFVWSLLDNWEWNSGFTVRFGLYFVDYK 445
Score = 27.6 bits (54), Expect(3) = 2e-028
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2 / +2
Query: 240 LRRYPKSSAYWFRDVIAGS 184
L RYPK+SA WF+ + S
Sbjct: 452 LTRYPKASADWFKSFLPKS 508
>gb|DR014803.1|DR014803 HEAT1_51_E12.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_E12_A029 5', mRNA sequence
Length = 858
Score = 70.3 bits (147), Expect(3) = 2e-028
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -2 / -3
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
L AAI G++ GYF WSLLDNFEW GYT RFGL +VDF
Sbjct: 520 LTAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDF 401
Score = 63.8 bits (133), Expect(3) = 2e-028
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -2 / -3
Query: 585 ERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENG 451
ER GV IG R D L++VP G+ K V YVKE Y NPT++++ENG
Sbjct: 745 ERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 611
Score = 29.0 bits (57), Expect(3) = 2e-028
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2 / -3
Query: 237 RRYPKSSAYWFRDVIAGSN*DHVRWPQSI* 148
+RYPK SA WFR + + +R SI*
Sbjct: 388 KRYPKLSAQWFRQFLQHDDQGSMRSSSSI* 299
>gb|BX250956.1|BX250956 BX250956 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP043D06, mRNA sequence
Length = 675
Score = 70.3 bits (147), Expect(3) = 1e-027
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -2 / +2
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
L AAI G++ GYF WSLLDNFEW GYT RFGL +VDF
Sbjct: 347 LTAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDF 466
Score = 60.2 bits (125), Expect(3) = 1e-027
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = -2 / +2
Query: 585 ERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENG 451
ER GV IG R D L++VP G+ K V YVKE Y NP ++++ENG
Sbjct: 122 ERHGVSIGERTAMDGLFVVPHGIQKIVEYVKEFYDNPIIIITENG 256
Score = 30.4 bits (60), Expect(3) = 1e-027
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2 / +2
Query: 237 RRYPKSSAYWFRDVIAGSN*DHVRWPQSI* 148
+RYPK SA WFR + + +R SI*
Sbjct: 479 KRYPKLSAQWFRQFLQHDDQGSIRGSSSI* 568
>dbj|BD224353.1| Materials and methods for the modification of plant lignin content
Length = 451
Score = 122 bits (261), Expect = 2e-027
Identities = 46/55 (83%), Positives = 49/55 (89%)
Frame = -2 / +3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDD
Sbjct: 186 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 350
>dbj|BD224416.1| Materials and methods for the modification of plant lignin content
Length = 437
Score = 122 bits (261), Expect = 2e-027
Identities = 46/55 (83%), Positives = 49/55 (89%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE YGNPTM+LSENGMDD
Sbjct: 172 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 336
>gb|AW042637.1|AW042637 ST24C01 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST24C01, mRNA sequence
Length = 567
Score = 67.5 bits (141), Expect(3) = 1e-026
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = -2 / +3
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
L AAI G++ GYF WSLLDNFEW GYT RFGL +V F
Sbjct: 336 LNAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVGF 455
Score = 63.8 bits (133), Expect(3) = 1e-026
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -2 / +3
Query: 585 ERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENG 451
ER GV IG R D L++VP G+ K V YVKE Y NPT++++ENG
Sbjct: 111 ERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 245
Score = 26.3 bits (51), Expect(3) = 1e-026
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 237 RRYPKSSAYWFRDVI 193
+RYPK SA WF+ +
Sbjct: 469 KRYPKLSAQWFKQFL 513
>gb|CF668848.1|CF668848 RTCNT1_39_C01.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_39_C01_A029 3', mRNA sequence
Length = 737
Score = 70.7 bits (148), Expect(3) = 3e-026
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -2 / +1
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
L AAI G++ GYF WSLLDNFEW GYT RFGL +VDF
Sbjct: 208 LNAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDF 327
Score = 55.6 bits (115), Expect(3) = 3e-026
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = -2 / +1
Query: 567 IGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENG 451
IG R D L++VP G+ K V YVKE Y NPT++++ENG
Sbjct: 1 IGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 117
Score = 29.5 bits (58), Expect(3) = 3e-026
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2 / +1
Query: 237 RRYPKSSAYWFRDVIAGSN*DHVRWPQSI* 148
+RYPK SA WFR + + +R SI*
Sbjct: 340 KRYPKLSAQWFRQFLQHDDQRSIRSSSSI* 429
>gb|CX646974.1|CX646974 COLD1_12_D12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_12_D12_A029 5', mRNA sequence
Length = 794
Score = 68.4 bits (143), Expect(3) = 7e-025
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -2 / +1
Query: 351 DGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
D G GYFAWSLLDN+EW GYTSRFGL +VD+R
Sbjct: 226 DDGCKVGGYFAWSLLDNWEWAAGYTSRFGLYFVDYR 333
Score = 59.7 bits (124), Expect(3) = 7e-025
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = -2 / +1
Query: 567 IGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTV 424
IG +A S WLY G+ + Y+K++Y NP ++++ENGMDD N+ +
Sbjct: 1 IGDKAASAWLYPFSHGIRSLMNYIKQRYNNPPVIITENGMDDSNNILI 144
Score = 23.1 bits (44), Expect(3) = 7e-025
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2 / +1
Query: 240 LRRYPKSSAYWFR 202
L R+PK+S WF+
Sbjct: 340 LTRHPKASVKWFK 378
>gb|BX679902.1|BX679902 BX679902 RS Pinus pinaster cDNA clone RS35H05, mRNA sequence
Length = 578
Score = 70.3 bits (147), Expect(3) = 1e-024
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -2 / +2
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
L AAI G++ GYF WSLLDNFEW GYT RFGL +VDF
Sbjct: 206 LTAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDF 325
Score = 50.1 bits (103), Expect(3) = 1e-024
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = -2 / +2
Query: 564 GPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENG 451
G R D L++VP G+ K V YVKE Y NP ++++ENG
Sbjct: 2 GERTAMDGLFVVPHGIQKIVEYVKEFYDNPIIIITENG 115
Score = 30.4 bits (60), Expect(3) = 1e-024
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2 / +2
Query: 237 RRYPKSSAYWFRDVIAGSN*DHVRWPQSI* 148
+RYPK SA WFR + + +R SI*
Sbjct: 338 KRYPKLSAQWFRQFLQHDDQGSIRGSSSI* 427
>gb|BG039942.1|BG039942 NXSI_101_H03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_101_H03 5' similar to Arabidopsis thaliana
sequence At5g54570 beta-glucosidase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 540
Score = 71.6 bits (150), Expect(2) = 1e-023
Identities = 24/54 (44%), Positives = 37/54 (68%)
Frame = -2 / +2
Query: 582 RDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVA 421
R GV IG R S WLY+VPWG+ + Y+K++Y NP + ++ENG+DD + ++
Sbjct: 152 RKGVMIGERGASRWLYVVPWGIRSLMIYIKQRYDNPPIFITENGIDDTNSPLIS 313
Score = 57.9 bits (120), Expect(2) = 1e-023
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = -2 / +2
Query: 360 AAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
A G + GYF WSLLDN+EW G+T RFGL +VD+
Sbjct: 383 AIXXDGCDVRGYFVWSLLDNWEWNSGFTVRFGLYFVDY 496
>gb|CO361958.1|CO361958 NDL2_8_E08.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_E08_A029 3', mRNA sequence
Length = 786
Score = 71.6 bits (150), Expect(3) = 3e-023
Identities = 30/67 (44%), Positives = 35/67 (52%)
Frame = -2 / +2
Query: 444 DPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFG 265
D G + Q +EL AI GA+ GY WSLLDNFEW GYT RFG
Sbjct: 251 DDGKTPLEQALNDSRRVMYHSEHLSELLEAISEGADIRGYLVWSLLDNFEWSFGYTYRFG 430
Query: 264 LVYVDFR 244
L YVD++
Sbjct: 431 LYYVDYK 451
Score = 41.4 bits (84), Expect(3) = 3e-023
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -2 / +2
Query: 588 YERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
YE DGV IG P GL + Y K +Y NPT+ ++E G D
Sbjct: 101 YEVDGVYIGSVEGVSTYRSYPAGLKDIINYTKHRYNNPTIYVTETGYVD 247
Score = 32.7 bits (65), Expect(3) = 3e-023
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -2 / +2
Query: 240 LRRYPKSSAYWFRDVIAGSN 181
L+RYP++SA WFR+++ N
Sbjct: 458 LKRYPRASANWFRNILKQEN 517
>gb|DR095084.1|DR095084 STRR1_18_E04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_18_E04_A033 5', mRNA sequence
Length = 813
Score = 69.8 bits (146), Expect(3) = 8e-023
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = -2 / +1
Query: 357 AIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
AI GA+ G+FAWSL+DNFEW GYTSRFG +Y+D++
Sbjct: 544 AIREGADVRGFFAWSLMDNFEWGFGYTSRFGFIYIDYK 657
Score = 45.5 bits (93), Expect(3) = 8e-023
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = -2 / +1
Query: 549 SDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
S WLY+ GL + Y+K++Y NP + ++ENG++D
Sbjct: 340 SFWLYVYAPGLRDLLIYIKQRYNNPPIFITENGVND 447
Score = 29.0 bits (57), Expect(3) = 8e-023
Identities = 8/13 (61%), Positives = 13/13 (100%)
Frame = -2 / +1
Query: 240 LRRYPKSSAYWFR 202
L+RYPK+SA+W++
Sbjct: 664 LKRYPKASAHWYK 702
>gb|CX652916.1|CX652916 COLD1_62_F11.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_F11_A029 3', mRNA sequence
Length = 805
Score = 69.8 bits (146), Expect(3) = 8e-023
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = -2 / +3
Query: 357 AIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
AI GA+ G+FAWSL+DNFEW GYTSRFG +Y+D++
Sbjct: 279 AIREGADVRGFFAWSLMDNFEWGFGYTSRFGFIYIDYK 392
Score = 45.5 bits (93), Expect(3) = 8e-023
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = -2 / +3
Query: 549 SDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
S WLY+ GL + Y+K++Y NP + ++ENG++D
Sbjct: 75 SFWLYVYAPGLRDLLIYIKQRYNNPPIFITENGVND 182
Score = 29.0 bits (57), Expect(3) = 8e-023
Identities = 8/13 (61%), Positives = 13/13 (100%)
Frame = -2 / +3
Query: 240 LRRYPKSSAYWFR 202
L+RYPK+SA+W++
Sbjct: 399 LKRYPKASAHWYK 437
>gb|CX652380.1|CX652380 COLD1_58_E05.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_58_E05_A029 5', mRNA sequence
Length = 588
Score = 86.3 bits (182), Expect(2) = 2e-021
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = -2 / +2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKE 490
W F Y R+GVPIGPRANS+WLYIVPWGLYKAVTYVKE
Sbjct: 428 WNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 544
Score = 35.9 bits (72), Expect(2) = 2e-021
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2 / +3
Query: 495 KEKYGNPTMLLSENGM 448
K YGNPTM+LSENGM
Sbjct: 540 KNTYGNPTMILSENGM 587
>gb|CO158951.1|CO158951 FLD1_10_G08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_10_G08_A029 3', mRNA sequence
Length = 716
Score = 94.5 bits (200), Expect(2) = 2e-021
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = -2 / -1
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
E+ A+ GAN GYF WS LDNFEW GY+ RFGL++VD+RT +R PK+SAYWF V+
Sbjct: 287 EIHKAMRNGANLRGYFYWSFLDNFEWAFGYSKRFGLIHVDYRTHKRTPKASAYWFCTVM 111
Score = 27.2 bits (53), Expect(2) = 2e-021
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2 / -1
Query: 534 IVPWGLYKAVTYVKEKY 484
I PWG+ K + Y ++KY
Sbjct: 452 IAPWGVRKLLEYTQQKY 402
>gb|DR054591.1|DR054591 RTCA1_18_G02.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_18_G02_A029 3', mRNA sequence
Length = 356
Score = 101 bits (216), Expect = 4e-021
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = -2 / +1
Query: 330 GYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
GYFAWSLLDNFEWK GYTSRFG+VYVDF TL+RYPK SAYWF ++
Sbjct: 1 GYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLL 138
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 282,887,981
Number of Sequences: 355925
Number of extensions: 4035109
Number of successful extensions: 86612
Number of sequences better than 1.0e-020: 47
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 8141035500
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)