TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3203888.2.1
(787 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR090910.1|DR090910 RTAL1_18_D09.b1_A029 Roots plus adde... 199 7e-061
gb|CF665624.1|CF665624 RTCNT1_17_E06.b1_A029 Root control P... 182 2e-047
gb|CO173465.1|CO173465 NDL1_36_H11.b1_A029 Needles control ... 168 2e-043
dbj|BD224327.1| Materials and methods for the modification ... 125 3e-035
dbj|BD224403.1| Materials and methods for the modification ... 125 3e-035
gb|DR167163.1|DR167163 RTPHOS1_17_D01.b1_A029 Roots minus p... 124 6e-035
gb|CX652979.1|CX652979 COLD1_62_D10.g1_A029 Root cold Pinus... 124 6e-035
gb|CO369886.1|CO369886 RTK1_55_A05.b1_A029 Roots minus pota... 124 6e-035
gb|CX652251.1|CX652251 COLD1_57_H09.g1_A029 Root cold Pinus... 124 6e-035
gb|DR069065.1|DR069065 RTDK1_4_D11.g1_A029 Roots, dark Pinu... 123 1e-034
gb|BQ107845.1|BQ107845 NXLV101_C09_F NXLV (Nsf Xylem Late w... 90 1e-034
gb|DR060317.1|DR060317 RTNIT1_27_C10.b1_A029 Roots minus ni... 122 2e-034
gb|DR094005.1|DR094005 STRR1_11_G04.g1_A033 Stem Response R... 122 2e-034
gb|CO170118.1|CO170118 NDL1_11_F12.g1_A029 Needles control ... 122 2e-034
gb|DR093928.1|DR093928 STRR1_11_G04.b1_A033 Stem Response R... 122 2e-034
gb|DR020354.1|DR020354 STRS1_36_H04.b1_A034 Shoot tip pitch... 122 2e-034
gb|DR060400.1|DR060400 RTNIT1_27_C10.g1_A029 Roots minus ni... 122 2e-034
gb|DR020424.1|DR020424 STRS1_36_H04.g1_A034 Shoot tip pitch... 122 1e-033
gb|CX652893.1|CX652893 COLD1_62_D10.b1_A029 Root cold Pinus... 124 2e-033
gb|CO170121.1|CO170121 NDL1_11_G04.g1_A029 Needles control ... 126 3e-033
gb|DR068995.1|DR068995 RTDK1_4_D11.b1_A029 Roots, dark Pinu... 123 6e-033
gb|DR080770.1|DR080770 RTFEPL1_25_C12.b1_A029 Roots plus ad... 122 8e-033
gb|BX254093.1|BX254093 BX254093 Pinus pinaster differenciat... 126 9e-033
gb|U70873.1|PRU70873 Pinus radiata O-methyltransferase (omt... 119 2e-032
emb|AX212322.1| Sequence 1 from Patent WO0159139 71 1e-031
emb|AX212323.1| Sequence 2 from Patent WO0159139 71 1e-031
gb|DR101032.1|DR101032 STRR1_70_C07.b1_A033 Stem Response R... 107 3e-031
gb|BG275493.1|BG275493 NXSI_139_D08_F NXSI (Nsf Xylem Side ... 121 3e-031
gb|DR078688.1|DR078688 RTFEPL1_6_F04.b1_A029 Roots plus add... 107 9e-031
gb|BX678852.1|BX678852 BX678852 RS Pinus pinaster cDNA clon... 111 2e-030
gb|BX678762.1|BX678762 BX678762 RS Pinus pinaster cDNA clon... 111 2e-030
gb|CF664309.1|CF664309 RTCNT1_9_A12.b1_A029 Root control Pi... 114 2e-030
gb|DR101310.1|DR101310 STRR1_72_B03.b1_A033 Stem Response R... 100 4e-030
gb|CF390447.1|CF390447 RTDR2_19_C10.g1_A021 Loblolly pine r... 119 5e-030
gb|DR385848.1|DR385848 RTHG1_11_F05.b1_A029 Roots plus adde... 119 5e-030
gb|CF387392.1|CF387392 RTDR1_12_B04.g1_A015 Loblolly pine r... 119 5e-030
gb|CF400142.1|CF400142 RTWW1_3_A06.g1_A015 Well-watered lob... 119 5e-030
gb|CF477891.1|CF477891 RTWW3_13_E06.g1_A022 Well-watered lo... 119 5e-030
gb|CF385259.1|CF385259 RTDR1_2_H01.g1_A015 Loblolly pine ro... 119 5e-030
gb|CF478857.1|CF478857 RTWW3_15_E06.g1_A022 Well-watered lo... 119 5e-030
gb|CF387289.1|CF387289 RTDR1_12_B04.b1_A015 Loblolly pine r... 119 5e-030
gb|CF398420.1|CF398420 RTDS3_12_G12.g1_A022 Drought-stresse... 119 5e-030
gb|CF665309.1|CF665309 RTCNT1_15_E12.b1_A029 Root control P... 119 5e-030
gb|AI812857.1|AI812857 20G9 Pine Lambda Zap Xylem library P... 119 5e-030
gb|DR165285.1|DR165285 RTPHOS1_4_A06.b1_A029 Roots minus ph... 124 5e-030
gb|DR118474.1|DR118474 RTMG1_17_F04.b1_A029 Roots minus mag... 100 6e-030
gb|DR025455.1|DR025455 STRS1_71_E09.g1_A034 Shoot tip pitch... 100 6e-030
gb|CF665472.1|CF665472 RTCNT1_16_E12.b1_A029 Root control P... 117 1e-029
gb|CX646520.1|CX646520 COLD1_9_H01.g1_A029 Root cold Pinus ... 100 1e-029
gb|CX648030.1|CX648030 COLD1_26_C06.b1_A029 Root cold Pinus... 101 1e-029
gb|CX653031.1|CX653031 COLD1_63_A10.b1_A029 Root cold Pinus... 100 1e-029
gb|DR071353.1|DR071353 RTDK1_19_G05.b1_A029 Roots, dark Pin... 100 3e-029
gb|DR072066.1|DR072066 RTDK1_23_H03.g1_A029 Roots, dark Pin... 100 3e-029
gb|U39301.1|PTU39301 Pinus taeda xylem caffeic acid O-methy... 116 3e-029
gb|CX652953.1|CX652953 COLD1_62_B07.g1_A029 Root cold Pinus... 116 3e-029
gb|DR078362.1|DR078362 RTFEPL1_3_D11.g1_A029 Roots plus add... 122 4e-029
gb|DR180379.1|DR180379 RTMNUT1_28_F05.b1_A029 Roots minus m... 122 4e-029
gb|DR015421.1|DR015421 STRS1_3_A05.g1_A034 Shoot tip pitch ... 99 7e-029
gb|DR015347.1|DR015347 STRS1_3_A05.b1_A034 Shoot tip pitch ... 99 7e-029
gb|DR101998.1|DR101998 STRR1_77_H06.b1_A033 Stem Response R... 99 7e-029
gb|DR057315.1|DR057315 RTNIT1_5_C05.b1_A029 Roots minus nit... 99 7e-029
gb|DR080794.1|DR080794 RTFEPL1_25_F08.b1_A029 Roots plus ad... 99 7e-029
gb|CF388135.1|CF388135 RTDR2_1_H07.b1_A021 Loblolly pine ro... 99 7e-029
gb|CO364416.1|CO364416 RTK1_15_C09.g1_A029 Roots minus pota... 61 1e-027
gb|CO197585.1|CO197585 GEO1_7_B10.g1_A029 Root gravitropism... 118 1e-027
gb|CF471118.1|CF471118 RTDS1_16_H07.g1_A015 Drought-stresse... 122 2e-027
gb|DR161681.1|DR161681 RTFE1_13_F11.b1_A029 Roots minus iro... 114 5e-027
gb|CO175243.1|CO175243 NDL1_53_A10.g1_A029 Needles control ... 100 5e-027
gb|CO164394.1|CO164394 FLD1_47_F03.g1_A029 Root flooded Pin... 106 6e-027
gb|CO164320.1|CO164320 FLD1_47_F03.b1_A029 Root flooded Pin... 106 6e-027
gb|DR384933.1|DR384933 RTHG1_5_C09.g1_A029 Roots plus added... 106 6e-027
gb|DR384861.1|DR384861 RTHG1_5_C09.b1_A029 Roots plus added... 106 6e-027
gb|BE758644.1|BE758644 NXCI_069_E06_F NXCI (Nsf Xylem Compr... 120 1e-026
gb|DR388552.1|DR388552 RTHG1_29_A07.b1_A029 Roots plus adde... 104 2e-026
gb|CF385489.1|CF385489 RTDR1_4_C03.b1_A015 Loblolly pine ro... 105 4e-026
gb|DR118553.1|DR118553 RTMG1_17_F04.g1_A029 Roots minus mag... 98 4e-026
gb|CO167211.1|CO167211 FLD1_67_C10.g1_A029 Root flooded Pin... 103 6e-026
gb|DR386464.1|DR386464 RTHG1_15_H04.b1_A029 Roots plus adde... 103 6e-026
gb|CO167139.1|CO167139 FLD1_67_C10.b1_A029 Root flooded Pin... 103 6e-026
gb|DR090448.1|DR090448 RTAL1_15_D01.b1_A029 Roots plus adde... 103 6e-026
gb|DR386637.1|DR386637 RTHG1_16_B04.g1_A029 Roots plus adde... 101 1e-025
gb|BQ696333.1|BQ696333 NXPV_041_B10_F NXPV (Nsf Xylem Plani... 103 2e-025
gb|AI813142.1|AI813142 23D9 Pine Lambda Zap Xylem library P... 90 3e-025
gb|CF665682.1|CF665682 RTCNT1_17_E06.g1_A029 Root control P... 115 5e-025
gb|CX712347.1|CX712347 RTPQ1_2_A03.b2_A032 Roots treated wi... 109 5e-025
gb|CO170042.1|CO170042 NDL1_11_G04.b1_A029 Needles control ... 114 9e-025
gb|CX651603.1|CX651603 COLD1_53_C02.g1_A029 Root cold Pinus... 95 1e-024
gb|CO175244.1|CO175244 NDL1_53_A11.g1_A029 Needles control ... 100 1e-024
gb|BX680279.1|BX680279 BX680279 RS Pinus pinaster cDNA clon... 105 1e-024
gb|DR742592.1|DR742592 RTCU1_5_F03.b2_A029 Roots plus added... 104 1e-024
gb|CX714803.1|CX714803 RTPQ1_27_C08.b1_A032 Roots treated w... 103 2e-024
gb|CO370451.1|CO370451 RTK1_68_A10.b1_A029 Roots minus pota... 108 5e-024
gb|CO175245.1|CO175245 NDL1_53_A12.g1_A029 Needles control ... 100 5e-024
gb|CX647330.1|CX647330 COLD1_15_G09.b1_A029 Root cold Pinus... 100 2e-023
dbj|BD224468.1| Materials and methods for the modification ... 100 2e-023
gb|AH014324.1|SEG_AY764741S Pinus taeda isolate 24 caffeate... 60 7e-023
gb|AH014325.1|SEG_AY764743S Pinus taeda isolate 15 caffeate... 60 7e-023
gb|AH014326.1|SEG_AY764745S Pinus taeda isolate 17_master c... 60 7e-023
gb|AH014328.1|SEG_AY764749S Pinus taeda isolate 16_master c... 60 7e-023
gb|AH014332.1|SEG_AY764757S Pinus taeda isolate 7_master ca... 60 7e-023
gb|AH014335.1|SEG_AY764763S Pinus taeda isolate 25_master c... 60 7e-023
gb|AH014337.1|SEG_AY764767S Pinus taeda isolate 27_master c... 60 7e-023
gb|AH014339.1|SEG_AY764771S Pinus taeda isolate 26_master c... 60 7e-023
gb|AH014343.1|SEG_AY764779S Pinus taeda isolate 6_master ca... 60 7e-023
gb|AH014345.1|SEG_AY764783S Pinus taeda isolate 1_master ca... 60 7e-023
gb|AH014347.1|SEG_AY764787S Pinus taeda isolate 29_master c... 60 7e-023
gb|AH014352.1|SEG_AY764797S Pinus taeda isolate 2_master ca... 60 7e-023
gb|AH014322.1|SEG_AY764737S Pinus taeda isolate 22 caffeate... 60 7e-023
gb|AH014323.1|SEG_AY764739S Pinus taeda isolate 10 caffeate... 60 7e-023
gb|AH014327.1|SEG_AY764747S Pinus taeda isolate 23_master c... 60 7e-023
gb|AH014329.1|SEG_AY764751S Pinus taeda isolate 30_master c... 60 7e-023
gb|AH014330.1|SEG_AY764753S Pinus taeda isolate 13_master c... 60 7e-023
gb|AH014331.1|SEG_AY764755S Pinus taeda isolate 28_master c... 60 7e-023
gb|AH014333.1|SEG_AY764759S Pinus taeda isolate 31_master c... 60 7e-023
gb|AH014334.1|SEG_AY764761S Pinus taeda isolate 32_master c... 60 7e-023
gb|AH014336.1|SEG_AY764765S Pinus taeda isolate 11_master c... 60 7e-023
gb|AH014338.1|SEG_AY764769S Pinus taeda isolate 8_master ca... 60 7e-023
gb|AH014340.1|SEG_AY764773S Pinus taeda isolate 5_master ca... 60 7e-023
gb|AH014341.1|SEG_AY764775S Pinus taeda isolate 3_master ca... 60 7e-023
gb|AH014342.1|SEG_AY764777S Pinus taeda isolate 4_master ca... 60 7e-023
gb|AH014346.1|SEG_AY764785S Pinus taeda isolate 19_master c... 60 7e-023
gb|AH014348.1|SEG_AY764789S Pinus taeda isolate 18_master c... 60 7e-023
gb|AH014349.1|SEG_AY764791S Pinus taeda isolate 20_master c... 60 7e-023
gb|AH014350.1|SEG_AY764793S Pinus taeda isolate 21_master c... 60 7e-023
gb|AH014351.1|SEG_AY764795S Pinus taeda isolate 12_master c... 60 7e-023
gb|AH014344.1|SEG_AY764781S Pinus taeda isolate 9_master ca... 60 7e-023
gb|AH014353.1|SEG_AY764799S Pinus taeda isolate 14_master c... 60 7e-023
gb|AY764742.1|AY764741S2 Pinus taeda isolate 24 caffeate O-... 60 7e-023
gb|AY764744.1|AY764743S2 Pinus taeda isolate 15 caffeate O-... 60 7e-023
gb|AY764746.1|AY764745S2 Pinus taeda isolate 17 caffeate O-... 60 7e-023
gb|AY764750.1|AY764749S2 Pinus taeda isolate 16 caffeate O-... 60 7e-023
gb|AY764758.1|AY764757S2 Pinus taeda isolate 7 caffeate O-m... 60 7e-023
gb|AY764764.1|AY764763S2 Pinus taeda isolate 25 caffeate O-... 60 7e-023
gb|AY764768.1|AY764767S2 Pinus taeda isolate 27 caffeate O-... 60 7e-023
gb|AY764772.1|AY764771S2 Pinus taeda isolate 26 caffeate O-... 60 7e-023
gb|AY764780.1|AY764779S2 Pinus taeda isolate 6 caffeate O-m... 60 7e-023
gb|AY764784.1|AY764783S2 Pinus taeda isolate 1 caffeate O-m... 60 7e-023
gb|AY764788.1|AY764787S2 Pinus taeda isolate 29 caffeate O-... 60 7e-023
gb|AY764798.1|AY764797S2 Pinus taeda isolate 2 caffeate O-m... 60 7e-023
gb|AY764738.1|AY764737S2 Pinus taeda isolate 22 caffeate O-... 60 7e-023
gb|AY764740.1|AY764739S2 Pinus taeda isolate 10 caffeate O-... 60 7e-023
gb|AY764748.1|AY764747S2 Pinus taeda isolate 23 caffeate O-... 60 7e-023
gb|AY764752.1|AY764751S2 Pinus taeda isolate 30 caffeate O-... 60 7e-023
gb|AY764754.1|AY764753S2 Pinus taeda isolate 13 caffeate O-... 60 7e-023
gb|AY764756.1|AY764755S2 Pinus taeda isolate 28 caffeate O-... 60 7e-023
gb|AY764760.1|AY764759S2 Pinus taeda isolate 31 caffeate O-... 60 7e-023
gb|AY764762.1|AY764761S2 Pinus taeda isolate 32 caffeate O-... 60 7e-023
gb|AY764766.1|AY764765S2 Pinus taeda isolate 11 caffeate O-... 60 7e-023
gb|AY764770.1|AY764769S2 Pinus taeda isolate 8 caffeate O-m... 60 7e-023
gb|AY764774.1|AY764773S2 Pinus taeda isolate 5 caffeate O-m... 60 7e-023
gb|AY764776.1|AY764775S2 Pinus taeda isolate 3 caffeate O-m... 60 7e-023
gb|AY764778.1|AY764777S2 Pinus taeda isolate 4 caffeate O-m... 60 7e-023
gb|AY764786.1|AY764785S2 Pinus taeda isolate 19 caffeate O-... 60 7e-023
gb|AY764790.1|AY764789S2 Pinus taeda isolate 18 caffeate O-... 60 7e-023
gb|AY764792.1|AY764791S2 Pinus taeda isolate 20 caffeate O-... 60 7e-023
gb|AY764794.1|AY764793S2 Pinus taeda isolate 21 caffeate O-... 60 7e-023
gb|AY764796.1|AY764795S2 Pinus taeda isolate 12 caffeate O-... 60 7e-023
gb|AY764782.1|AY764781S2 Pinus taeda isolate 9 caffeate O-m... 60 7e-023
gb|AY764800.1|AY764799S2 Pinus taeda isolate 14 caffeate O-... 60 7e-023
gb|CF476689.1|CF476689 RTWW3_3_G07.b1_A022 Well-watered lob... 100 1e-022
gb|AF119225.1|AF119225 Pinus radiata caffeic acid ortho-met... 49 3e-022
gb|BF186028.1|BF186028 NXCI_132_C07_F NXCI (Nsf Xylem Compr... 105 5e-022
gb|DR118289.1|DR118289 RTMG1_12_H02.b1_A029 Roots minus mag... 96 7e-022
gb|CX647162.1|CX647162 COLD1_14_B09.b1_A029 Root cold Pinus... 104 7e-022
gb|DR742763.1|DR742763 RTCU1_6_G08.g2_A029 Roots plus added... 104 7e-022
gb|CO157658.1|CO157658 FLD1_1_E03.b1_A029 Root flooded Pinu... 103 2e-021
gb|DR092192.1|DR092192 RTAL1_27_E10.b1_A029 Roots plus adde... 103 2e-021
>gb|DR090910.1|DR090910 RTAL1_18_D09.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_18_D09_A029 3', mRNA sequence
Length = 710
Score = 199 bits (428), Expect(3) = 7e-061
Identities = 79/117 (67%), Positives = 94/117 (80%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFDLP VVA AP+ G+ HVGGDMF+ IPSGDAIFMKW+L+TW D++C ILRNC A
Sbjct: 194 GINFDLPHVVAGAPAYDGIEHVGGDMFEFIPSGDAIFMKWILSTWGDEKCIQILRNCYKA 373
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVMTPYRTQGRERSEEEFRHLGVDA 281
LPDGGK++ACEPV+P+ TD S TR LLE DIF+MT Y + G+ER+EEEFR L DA
Sbjct: 374 LPDGGKVIACEPVLPKYTDDSQRTRTLLEGDIFIMTIYSSGGKERTEEEFRRLCSDA 544
Score = 116 bits (248), Expect(2) = 5e-031
Identities = 60/119 (50%), Positives = 72/119 (60%)
Frame = +3 / -3
Query: 282 ASTPRWRNSSSERSLPCVR*GVMTKMSFSSSALVPXXXXXXXXXXXXQATSLPPSGKAAG 461
AS RNSSS RSLP * V+ K+S S V QA +LPPSG A
Sbjct: 543 ASLHNLRNSSSVRSLPPEL*IVIIKISPSRRVRVL*LSSVYLGKTGSQAITLPPSGSAL* 364
Query: 462 QFLRMAGHSSSVHVVRTHFMKMASPEGMDLNISPPTCLTPAIDGAAATTSGRSKLMPSV 638
QFLR+ H SS HV + HFM +ASP+GM+ NISPPTC P+ GA ATT G+SKL+P +
Sbjct: 363 QFLRIWMHFSSPHVDKIHFMNIASPDGMNSNISPPTCSIPSYAGAPATTWGKSKLIPLI 187
Score = 46.9 bits (96), Expect(3) = 7e-061
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = -1 / +2
Query: 724 GFRGVATLVDVGGSSGACLEMIMRR 650
GF+GV TLVDVGGSSG CL MI+++
Sbjct: 104 GFKGVRTLVDVGGSSGFCLHMIIQK 178
Score = 38.2 bits (77), Expect(2) = 5e-031
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +3 / -3
Query: 657 MIISRQAPELPPTSTSVATP 716
MI+ RQ PELPPTSTSV TP
Sbjct: 171 MIM*RQNPELPPTSTSVRTP 112
Score = 27.6 bits (54), Expect(3) = 7e-061
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1 / +2
Query: 280 AGFTAFRAIYLDPFYAVLEYTK* 212
AGF+ LDPFY++LE K*
Sbjct: 542 AGFSKVETRDLDPFYSLLEIQK* 610
>gb|CF665624.1|CF665624 RTCNT1_17_E06.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_17_E06_A029 3', mRNA sequence
Length = 673
Score = 182 bits (391), Expect(2) = 2e-047
Identities = 73/115 (63%), Positives = 89/115 (77%)
Frame = -1 / +2
Query: 625 NFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAALP 446
NFDLP VVA AP+ G+ HVGGDMF+ IPSGDAIFMKW+L+ W+D++C ILRNC ALP
Sbjct: 2 NFDLPYVVAGAPAYDGIEHVGGDMFEFIPSGDAIFMKWILSGWSDEKCIQILRNCYKALP 181
Query: 445 DGGKLVACEPVVPEETDSSPGTRALLENDIFVMTPYRTQGRERSEEEFRHLGVDA 281
D GK++ACEP++P+ TD S TR LLE DIF MT + G+ER+EEEFR L DA
Sbjct: 182 DEGKVIACEPLLPKYTDDSQRTRTLLEGDIFAMTILNSGGKERTEEEFRRLCSDA 346
Score = 28.1 bits (55), Expect(2) = 2e-047
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1 / +2
Query: 280 AGFTAFRAIYLDPFYAVLEYTK* 212
AGF+ LDPFY++LE K*
Sbjct: 344 AGFSKLETRDLDPFYSLLEIQK* 412
>gb|CO173465.1|CO173465 NDL1_36_H11.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_36_H11_A029 3', mRNA sequence
Length = 648
Score = 168 bits (361), Expect(2) = 2e-043
Identities = 67/108 (62%), Positives = 83/108 (76%)
Frame = -1 / +3
Query: 604 VAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAALPDGGKLVA 425
VA AP+ G+ HVGGDMF+ IPSGDAIFMKW+L+ W+D++C ILRNC ALPD GK++A
Sbjct: 3 VAGAPAYDGIEHVGGDMFEFIPSGDAIFMKWILSGWSDEKCIQILRNCYKALPDEGKVIA 182
Query: 424 CEPVVPEETDSSPGTRALLENDIFVMTPYRTQGRERSEEEFRHLGVDA 281
CEP++P+ TD S TR LLE DIF MT + G+ER+EEEFR L DA
Sbjct: 183 CEPLLPKYTDDSQRTRTLLEGDIFAMTILNSGGKERTEEEFRRLCSDA 326
Score = 28.1 bits (55), Expect(2) = 2e-043
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1 / +3
Query: 280 AGFTAFRAIYLDPFYAVLEYTK* 212
AGF+ LDPFY++LE K*
Sbjct: 324 AGFSKLETRDLDPFYSLLEIQK* 392
>dbj|BD224327.1| Materials and methods for the modification of plant lignin content
Length = 744
Score = 125 bits (268), Expect(3) = 3e-035
Identities = 47/95 (49%), Positives = 65/95 (68%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFDL V+A AP V+HVGGDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 310 GINFDLSHVLADAPHYPAVKHVGGDMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKA 489
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++A + ++P ++SP R D+ ++
Sbjct: 490 LPEKGKVIAVDTILPVAAETSPYARQGFHTDLLML 594
Score = 35.9 bits (72), Expect(3) = 3e-035
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ R P I+
Sbjct: 220 GFKEVQELVDVGGGIGSTLNLIVSRYPHIS 309
Score = 25.4 bits (49), Expect(3) = 3e-035
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1 / +1
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EF+ L
Sbjct: 586 LMLAYNPGGKERTEQEFQDL 645
>dbj|BD224403.1| Materials and methods for the modification of plant lignin content
Length = 661
Score = 125 bits (268), Expect(3) = 3e-035
Identities = 47/95 (49%), Positives = 65/95 (68%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFDL V+A AP V+HVGGDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 260 GINFDLSHVLADAPHYPAVKHVGGDMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKA 439
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++A + ++P ++SP R D+ ++
Sbjct: 440 LPEKGKVIAVDTILPVAAETSPYARQGFHTDLLML 544
Score = 35.9 bits (72), Expect(3) = 3e-035
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1 / +2
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ R P I+
Sbjct: 170 GFKEVQELVDVGGGIGSTLNLIVSRYPHIS 259
Score = 25.4 bits (49), Expect(3) = 3e-035
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1 / +2
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EF+ L
Sbjct: 536 LMLAYNPGGKERTEQEFQDL 595
>gb|DR167163.1|DR167163 RTPHOS1_17_D01.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_17_D01_A029 3', mRNA sequence
Length = 850
Score = 124 bits (265), Expect(3) = 6e-035
Identities = 46/95 (48%), Positives = 64/95 (67%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFD+P VV AP V+HVGGDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 209 GINFDMPHVVVDAPHYPAVKHVGGDMFDSVPSGQAIFMKWILHDWSDDHCLRLLKNCHKA 388
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++ + ++P ++SP R D+ ++
Sbjct: 389 LPEKGKVIVVDTILPVAAETSPYARQGFHIDLLML 493
Score = 34.5 bits (69), Expect(3) = 6e-035
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +2
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ + P I+
Sbjct: 119 GFKEVQELVDVGGGVGSTLNLIVSKYPHIS 208
Score = 27.2 bits (53), Expect(3) = 6e-035
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1 / +2
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EFR L
Sbjct: 485 LMLAYNPGGKERTEQEFRDL 544
>gb|CX652979.1|CX652979 COLD1_62_D10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_D10_A029 5', mRNA sequence
Length = 828
Score = 124 bits (265), Expect(3) = 6e-035
Identities = 46/95 (48%), Positives = 64/95 (67%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFD+P VV AP V+HVGGDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 150 GINFDMPHVVVDAPHYPAVKHVGGDMFDSVPSGQAIFMKWILHDWSDDHCLRLLKNCHKA 329
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++ + ++P ++SP R D+ ++
Sbjct: 330 LPEKGKVIVVDTILPVAAETSPYARQGFHIDLLML 434
Score = 34.5 bits (69), Expect(3) = 6e-035
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ + P I+
Sbjct: 60 GFKEVQELVDVGGGVGSTLNLIVSKYPHIS 149
Score = 27.2 bits (53), Expect(3) = 6e-035
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1 / +3
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EFR L
Sbjct: 426 LMLAYNPGGKERTEQEFRDL 485
>gb|CO369886.1|CO369886 RTK1_55_A05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_55_A05_A029 3', mRNA sequence
Length = 808
Score = 124 bits (265), Expect(3) = 6e-035
Identities = 46/95 (48%), Positives = 64/95 (67%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFD+P VV AP V+HVGGDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 188 GINFDMPHVVVDAPHYPAVKHVGGDMFDSVPSGQAIFMKWILHDWSDDHCLRLLKNCHKA 367
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++ + ++P ++SP R D+ ++
Sbjct: 368 LPEKGKVIVVDTILPVAAETSPYARQGFHIDLLML 472
Score = 34.5 bits (69), Expect(3) = 6e-035
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +2
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ + P I+
Sbjct: 98 GFKEVQELVDVGGGVGSTLNLIVSKYPHIS 187
Score = 27.2 bits (53), Expect(3) = 6e-035
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1 / +2
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EFR L
Sbjct: 464 LMLAYNPGGKERTEQEFRDL 523
>gb|CX652251.1|CX652251 COLD1_57_H09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_57_H09_A029 5', mRNA sequence
Length = 557
Score = 124 bits (265), Expect(3) = 6e-035
Identities = 46/95 (48%), Positives = 64/95 (67%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFD+P VV AP V+HVGGDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 173 GINFDMPHVVVDAPHYPAVKHVGGDMFDSVPSGQAIFMKWILHDWSDDHCLRLLKNCHKA 352
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++ + ++P ++SP R D+ ++
Sbjct: 353 LPEKGKVIVVDTILPVAAETSPYARQGFHIDLLML 457
Score = 34.5 bits (69), Expect(3) = 6e-035
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +2
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ + P I+
Sbjct: 83 GFKEVQELVDVGGGVGSTLNLIVSKYPHIS 172
Score = 27.2 bits (53), Expect(3) = 6e-035
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1 / +2
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EFR L
Sbjct: 449 LMLAYNPGGKERTEQEFRDL 508
>gb|DR069065.1|DR069065 RTDK1_4_D11.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_4_D11_A029 5', mRNA sequence
Length = 652
Score = 123 bits (263), Expect(3) = 1e-034
Identities = 46/95 (48%), Positives = 65/95 (68%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFDL V+A AP V+HVGGDMF S+PSG AIFMKW+L W+D+ C +L+NC A
Sbjct: 199 GINFDLSHVLADAPHYPAVKHVGGDMFDSVPSGQAIFMKWILHDWSDNHCRKLLKNCHKA 378
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++A + ++P ++SP R D+ ++
Sbjct: 379 LPEKGKVIAVDTILPVAAETSPYARQGFHTDLLML 483
Score = 35.9 bits (72), Expect(3) = 1e-034
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ R P I+
Sbjct: 109 GFKEVQELVDVGGGIGSTLNLIVSRYPHIS 198
Score = 25.4 bits (49), Expect(3) = 1e-034
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1 / +1
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EF+ L
Sbjct: 475 LMLAYNPGGKERTEQEFQDL 534
>gb|BQ107845.1|BQ107845 NXLV101_C09_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV101_C09 5' similar to Arabidopsis thaliana
sequence At3g53140 caffeic acid O-methyltransferase -
like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 453
Score = 89.5 bits (189), Expect(3) = 1e-034
Identities = 38/65 (58%), Positives = 46/65 (70%)
Frame = -1 / +2
Query: 475 ILRNCPAALPDGGKLVACEPVVPEETDSSPGTRALLENDIFVMTPYRTQGRERSEEEFRH 296
ILRNC ALPD GK++ACEP++P+ TD S TR LLE DIF MT + G+ER+E FR
Sbjct: 140 ILRNCYKALPDEGKVIACEPLLPKYTDDSQRTRTLLEGDIFAMTILNSGGKERTEXXFRR 319
Query: 295 LGVDA 281
L DA
Sbjct: 320 LCSDA 334
Score = 69.3 bits (145), Expect(3) = 1e-034
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = -1 / +3
Query: 613 PDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDEC 482
P VA AP+ G+ HVGGDMF+ IP IFMKW+L+ W+D++C
Sbjct: 3 PYXVAGAPAYDGIEHVGGDMFEFIPXXXXIFMKWILSGWSDEKC 134
Score = 25.8 bits (50), Expect(3) = 1e-034
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1 / +2
Query: 280 AGFTAFRAIYLDPFYAVLE 224
AGF+ LDPFY++LE
Sbjct: 332 AGFSKLXTRDLDPFYSLLE 388
>gb|DR060317.1|DR060317 RTNIT1_27_C10.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_27_C10_A029 3', mRNA sequence
Length = 842
Score = 122 bits (262), Expect(3) = 2e-034
Identities = 46/95 (48%), Positives = 64/95 (67%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFDL V+A AP V+HV GDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 127 GINFDLSHVLADAPHYPAVKHVAGDMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKA 306
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++A + ++P ++SP R D+ ++
Sbjct: 307 LPEKGKVIAVDTILPVAAETSPYARQGFHTDLLML 411
Score = 35.9 bits (72), Expect(3) = 2e-034
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ R P I+
Sbjct: 37 GFKEVQELVDVGGGIGSTLNLIVSRYPHIS 126
Score = 25.4 bits (49), Expect(3) = 2e-034
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1 / +1
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EF+ L
Sbjct: 403 LMLAYNQGGKERTEQEFQDL 462
>gb|DR094005.1|DR094005 STRR1_11_G04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_11_G04_A033 5', mRNA sequence
Length = 841
Score = 122 bits (262), Expect(3) = 2e-034
Identities = 46/95 (48%), Positives = 64/95 (67%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFDL V+A AP V+HV GDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 240 GINFDLSHVLADAPHYPAVKHVAGDMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKA 419
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++A + ++P ++SP R D+ ++
Sbjct: 420 LPEKGKVIAVDTILPVAAETSPYARQGFHTDLLML 524
Score = 35.9 bits (72), Expect(3) = 2e-034
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ R P I+
Sbjct: 150 GFKEVQELVDVGGGIGSTLNLIVSRYPHIS 239
Score = 25.4 bits (49), Expect(3) = 2e-034
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1 / +3
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EF+ L
Sbjct: 516 LMLAYNQGGKERTEQEFQDL 575
>gb|CO170118.1|CO170118 NDL1_11_F12.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_11_F12_A029 5', mRNA sequence
Length = 800
Score = 122 bits (262), Expect(3) = 2e-034
Identities = 46/95 (48%), Positives = 64/95 (67%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFDL V+A AP V+HV GDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 310 GINFDLSHVLADAPHYPAVKHVAGDMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKA 489
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++A + ++P ++SP R D+ ++
Sbjct: 490 LPEKGKVIAVDTILPVAAETSPYARQGFHTDLLML 594
Score = 35.9 bits (72), Expect(3) = 2e-034
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ R P I+
Sbjct: 220 GFKEVQELVDVGGGIGSTLNLIVSRYPHIS 309
Score = 25.4 bits (49), Expect(3) = 2e-034
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1 / +1
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EF+ L
Sbjct: 586 LMLAYNQGGKERTEQEFQDL 645
>gb|DR093928.1|DR093928 STRR1_11_G04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_11_G04_A033 3', mRNA sequence
Length = 789
Score = 122 bits (262), Expect(3) = 2e-034
Identities = 46/95 (48%), Positives = 64/95 (67%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFDL V+A AP V+HV GDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 135 GINFDLSHVLADAPHYPAVKHVAGDMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKA 314
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++A + ++P ++SP R D+ ++
Sbjct: 315 LPEKGKVIAVDTILPVAAETSPYARQGFHTDLLML 419
Score = 35.9 bits (72), Expect(3) = 2e-034
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ R P I+
Sbjct: 45 GFKEVQELVDVGGGIGSTLNLIVSRYPHIS 134
Score = 25.4 bits (49), Expect(3) = 2e-034
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1 / +3
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EF+ L
Sbjct: 411 LMLAYNQGGKERTEQEFQDL 470
>gb|DR020354.1|DR020354 STRS1_36_H04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_36_H04_A034 3', mRNA sequence
Length = 783
Score = 122 bits (262), Expect(3) = 2e-034
Identities = 46/95 (48%), Positives = 64/95 (67%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFDL V+A AP V+HV GDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 129 GINFDLSHVLADAPHYPAVKHVAGDMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKA 308
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++A + ++P ++SP R D+ ++
Sbjct: 309 LPEKGKVIAVDTILPVAAETSPYARQGFHTDLLML 413
Score = 35.9 bits (72), Expect(3) = 2e-034
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ R P I+
Sbjct: 39 GFKEVQELVDVGGGIGSTLNLIVSRYPHIS 128
Score = 25.4 bits (49), Expect(3) = 2e-034
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1 / +3
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EF+ L
Sbjct: 405 LMLAYNQGGKERTEQEFQDL 464
>gb|DR060400.1|DR060400 RTNIT1_27_C10.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_27_C10_A029 5', mRNA sequence
Length = 740
Score = 122 bits (262), Expect(3) = 2e-034
Identities = 46/95 (48%), Positives = 64/95 (67%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFDL V+A AP V+HV GDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 309 GINFDLSHVLADAPHYPAVKHVAGDMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKA 488
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++A + ++P ++SP R D+ ++
Sbjct: 489 LPEKGKVIAVDTILPVAAETSPYARQGFHTDLLML 593
Score = 35.9 bits (72), Expect(3) = 2e-034
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ R P I+
Sbjct: 219 GFKEVQELVDVGGGIGSTLNLIVSRYPHIS 308
Score = 25.4 bits (49), Expect(3) = 2e-034
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1 / +3
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EF+ L
Sbjct: 585 LMLAYNQGGKERTEQEFQDL 644
>gb|DR020424.1|DR020424 STRS1_36_H04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_36_H04_A034 5', mRNA sequence
Length = 683
Score = 122 bits (262), Expect(3) = 1e-033
Identities = 46/95 (48%), Positives = 64/95 (67%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFDL V+A AP V+HV GDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 106 GINFDLSHVLADAPHYPAVKHVAGDMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKA 285
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++A + ++P ++SP R D+ ++
Sbjct: 286 LPEKGKVIAVDTILPVAAETSPYARQGFHTDLLML 390
Score = 33.1 bits (66), Expect(3) = 1e-033
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -1 / +1
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF V LVDVGG G+ L +I+ R P I+
Sbjct: 16 GF*EVQELVDVGGGIGSTLNLIVSRYPHIS 105
Score = 25.4 bits (49), Expect(3) = 1e-033
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1 / +1
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EF+ L
Sbjct: 382 LMLAYNQGGKERTEQEFQDL 441
>gb|CX652893.1|CX652893 COLD1_62_D10.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_D10_A029 3', mRNA sequence
Length = 737
Score = 124 bits (265), Expect(3) = 2e-033
Identities = 46/95 (48%), Positives = 64/95 (67%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFD+P VV AP V+HVGGDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 83 GINFDMPHVVVDAPHYPAVKHVGGDMFDSVPSGQAIFMKWILHDWSDDHCLRLLKNCHKA 262
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++ + ++P ++SP R D+ ++
Sbjct: 263 LPEKGKVIVVDTILPVAAETSPYARQGFHIDLLML 367
Score = 29.0 bits (57), Expect(3) = 2e-033
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1 / +2
Query: 712 VATLVDVGGSSGACLEMIMRRVPTIT 635
V LVDVGG G+ L +I+ + P I+
Sbjct: 5 VQELVDVGGGVGSTLNLIVSKYPHIS 82
Score = 27.2 bits (53), Expect(3) = 2e-033
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1 / +2
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EFR L
Sbjct: 359 LMLAYNPGGKERTEQEFRDL 418
>gb|CO170121.1|CO170121 NDL1_11_G04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_11_G04_A029 5', mRNA sequence
Length = 791
Score = 126 bits (269), Expect(2) = 3e-033
Identities = 45/95 (47%), Positives = 66/95 (69%)
Frame = -1 / +2
Query: 628 INFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAAL 449
INFD+P VVA AP V+HV GDMF+S+PSG A+FMKW+L W+DD C +L+NC AL
Sbjct: 155 INFDIPHVVADAPHYPAVKHVSGDMFESVPSGQAVFMKWILHDWSDDHCRKLLKNCHKAL 334
Query: 448 PDGGKLVACEPVVPEETDSSPGTRALLENDIFVMT 344
P+ GK++ + ++P ++SP R + D+ ++T
Sbjct: 335 PEKGKVIVVDTILPVAAETSPHARHAFDLDLIMLT 439
Score = 35.9 bits (72), Expect(2) = 3e-033
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1 / +2
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ R P I+
Sbjct: 62 GFKEVQELVDVGGGVGSTLNLIVSRYPHIS 151
>gb|DR068995.1|DR068995 RTDK1_4_D11.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_4_D11_A029 3', mRNA sequence
Length = 732
Score = 123 bits (263), Expect(3) = 6e-033
Identities = 46/95 (48%), Positives = 65/95 (68%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFDL V+A AP V+HVGGDMF S+PSG AIFMKW+L W+D+ C +L+NC A
Sbjct: 80 GINFDLSHVLADAPHYPAVKHVGGDMFDSVPSGQAIFMKWILHDWSDNHCRKLLKNCHKA 259
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++A + ++P ++SP R D+ ++
Sbjct: 260 LPEKGKVIAVDTILPVAAETSPYARQGFHTDLLML 364
Score = 30.4 bits (60), Expect(3) = 6e-033
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1 / +2
Query: 712 VATLVDVGGSSGACLEMIMRRVPTIT 635
V LVDVGG G+ L +I+ R P I+
Sbjct: 2 VQELVDVGGGIGSTLNLIVSRYPHIS 79
Score = 25.4 bits (49), Expect(3) = 6e-033
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1 / +2
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EF+ L
Sbjct: 356 LMLAYNPGGKERTEQEFQDL 415
>gb|DR080770.1|DR080770 RTFEPL1_25_C12.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_25_C12_A029 3', mRNA sequence
Length = 874
Score = 122 bits (262), Expect(3) = 8e-033
Identities = 46/95 (48%), Positives = 64/95 (67%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFDL V+A AP V+HV GDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 81 GINFDLSHVLADAPHYPAVKHVAGDMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKA 260
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++A + ++P ++SP R D+ ++
Sbjct: 261 LPEKGKVIAVDTILPVAAETSPYARQGFHTDLLML 365
Score = 30.4 bits (60), Expect(3) = 8e-033
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1 / +3
Query: 712 VATLVDVGGSSGACLEMIMRRVPTIT 635
V LVDVGG G+ L +I+ R P I+
Sbjct: 3 VQELVDVGGGIGSTLNLIVSRYPHIS 80
Score = 25.4 bits (49), Expect(3) = 8e-033
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1 / +3
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EF+ L
Sbjct: 357 LMLAYNQGGKERTEQEFQDL 416
>gb|BX254093.1|BX254093 BX254093 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP093C03, mRNA sequence
Length = 523
Score = 126 bits (269), Expect(2) = 9e-033
Identities = 47/95 (49%), Positives = 65/95 (68%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFD+P VVA AP V+HVGGDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 232 GINFDMPHVVADAPHYPAVKHVGGDMFDSVPSGQAIFMKWILHDWSDDHCLRLLKNCHKA 411
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++ + ++P ++SP R D+ ++
Sbjct: 412 LPEKGKVIVVDTILPVAAETSPYARQGFHIDLLML 516
Score = 34.5 bits (69), Expect(2) = 9e-033
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ + P I+
Sbjct: 142 GFKEVQELVDVGGGVGSTLNLIVSKYPHIS 231
>gb|U70873.1|PRU70873 Pinus radiata O-methyltransferase (omt) mRNA, complete cds
Length = 1421
Score = 119 bits (254), Expect(3) = 2e-032
Identities = 42/74 (56%), Positives = 60/74 (81%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA A S++GV+HVGGDMF+++P+GDAIFMKW++ W D++C IL+NC A
Sbjct: 743 GINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKA 922
Query: 451 LPDGGKLVACEPVV 410
+PD GK++ + V+
Sbjct: 923 IPDTGKVIIVDVVL 964
Score = 34.5 bits (69), Expect(3) = 2e-032
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1 / +2
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF + +LVDVGG +G + I+R P IT
Sbjct: 653 GFHSLNSLVDVGGGTGTAVAEIVRAYPFIT 742
Score = 24.0 bits (46), Expect(3) = 2e-032
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -1 / +2
Query: 352 VMTPYRTQGRERSEEEFRHL 293
VM + + G+ERSE+E++ +
Sbjct: 1043 VMVAHSSGGKERSEKEWKRI 1102
>emb|AX212322.1| Sequence 1 from Patent WO0159139
Length = 1908
Score = 70.7 bits (148), Expect(4) = 1e-031
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMK 515
GINFD+P VVA AP V+HVGGDMF S+PSG AIFMK
Sbjct: 1338 GINFDMPHVVADAPHYPAVKHVGGDMFDSVPSGQAIFMK 1454
Score = 59.7 bits (124), Expect(4) = 1e-031
Identities = 19/58 (32%), Positives = 36/58 (62%)
Frame = -1 / +3
Query: 520 MKWVLTTWTDDECPAILRNCPAALPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
++W+L W+DD C +L+NC ALP+ GK++ + ++P ++SP R D+ ++
Sbjct: 1551 LQWILHDWSDDHCLRLLKNCHKALPEKGKVIVVDTILPVAAETSPYARQGFHIDLLML 1724
Score = 34.5 bits (69), Expect(4) = 1e-031
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ + P I+
Sbjct: 1248 GFKEVQELVDVGGGVGSTLNLIVSKYPHIS 1337
Score = 27.2 bits (53), Expect(4) = 1e-031
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1 / +3
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EFR L
Sbjct: 1716 LMLAYNPGGKERTEQEFRDL 1775
>emb|AX212323.1| Sequence 2 from Patent WO0159139
Length = 1908
Score = 70.7 bits (148), Expect(4) = 1e-031
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMK 515
GINFD+P VVA AP V+HVGGDMF S+PSG AIFMK
Sbjct: 1338 GINFDMPHVVADAPHYPAVKHVGGDMFDSVPSGQAIFMK 1454
Score = 59.7 bits (124), Expect(4) = 1e-031
Identities = 19/58 (32%), Positives = 36/58 (62%)
Frame = -1 / +3
Query: 520 MKWVLTTWTDDECPAILRNCPAALPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
++W+L W+DD C +L+NC ALP+ GK++ + ++P ++SP R D+ ++
Sbjct: 1551 LQWILHDWSDDHCLRLLKNCHKALPEKGKVIVVDTILPVAAETSPYARQGFHIDLLML 1724
Score = 34.5 bits (69), Expect(4) = 1e-031
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ + P I+
Sbjct: 1248 GFKEVQELVDVGGGVGSTLNLIVSKYPHIS 1337
Score = 27.2 bits (53), Expect(4) = 1e-031
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1 / +3
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EFR L
Sbjct: 1716 LMLAYNPGGKERTEQEFRDL 1775
>gb|DR101032.1|DR101032 STRR1_70_C07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_70_C07_A033 3', mRNA sequence
Length = 763
Score = 107 bits (229), Expect(3) = 3e-031
Identities = 40/95 (42%), Positives = 61/95 (64%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFD+P VVA AP VRHV G+MF S+P+G IFMKW+L W+ ++ +L+NC A
Sbjct: 181 GINFDMPHVVADAPHYPAVRHVAGNMFDSVPNGQTIFMKWILHDWSHNDSVKLLKNCHKA 360
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ G ++ + ++P ++SP R D+ ++
Sbjct: 361 LPEKGMVIVVDIILPVAAETSPHARQASHLDLMML 465
Score = 37.7 bits (76), Expect(3) = 3e-031
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ R P IT
Sbjct: 91 GFKEVQELVDVGGGIGSTLNLIVTRYPHIT 180
Score = 28.1 bits (55), Expect(3) = 3e-031
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1 / +1
Query: 352 VMTPYRTQGRERSEEEFRHLG 290
+M Y G+ER+E+EF+ LG
Sbjct: 457 MMLAYSPGGKERTEQEFQELG 519
>gb|BG275493.1|BG275493 NXSI_139_D08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_139_D08 5' similar to Arabidopsis thaliana
sequence At5g54160 O-methyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 556
Score = 121 bits (258), Expect(2) = 3e-031
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFD+P VV AP V+HVGGDMF S+PSG AIFMKW+L W+DD C +L+NC
Sbjct: 251 GINFDMPHVVVDAPHYPAVKHVGGDMFDSVPSGQAIFMKWILHDWSDDHCLRLLKNCHKX 430
Query: 451 LPDGGKLVACEPVVPEETDSSPGTR 377
LP+ GK++ + ++P ++SP R
Sbjct: 431 LPEKGKVIVVDTILPVAAETSPYAR 505
Score = 34.5 bits (69), Expect(2) = 3e-031
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +2
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF+ V LVDVGG G+ L +I+ + P I+
Sbjct: 161 GFKEVQELVDVGGGVGSTLNLIVSKYPHIS 250
>gb|DR078688.1|DR078688 RTFEPL1_6_F04.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_6_F04_A029 3', mRNA sequence
Length = 786
Score = 107 bits (228), Expect(3) = 9e-031
Identities = 40/95 (42%), Positives = 61/95 (64%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFD+P VVA AP VRHV G+MF S+P+G IFMKW+L W+ ++ +L+NC A
Sbjct: 103 GINFDMPHVVADAPHYPAVRHVAGNMFDSVPNGQTIFMKWILHDWSHNDSVKLLKNCHKA 282
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ G ++ + ++P ++SP R D+ ++
Sbjct: 283 LPEKGMVIVVDIILPVAAETSPYARQASHLDLMML 387
Score = 36.3 bits (73), Expect(3) = 9e-031
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -1 / +1
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF V LVDVGG G+ L +I+ R P IT
Sbjct: 13 GFXEVQELVDVGGGIGSTLNLIVTRYPHIT 102
Score = 28.1 bits (55), Expect(3) = 9e-031
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1 / +1
Query: 352 VMTPYRTQGRERSEEEFRHLG 290
+M Y G+ER+E+EF+ LG
Sbjct: 379 MMLAYSPGGKERTEQEFQELG 441
>gb|BX678852.1|BX678852 BX678852 RS Pinus pinaster cDNA clone RS16A04, mRNA sequence
Length = 591
Score = 111 bits (237), Expect(3) = 2e-030
Identities = 39/68 (57%), Positives = 54/68 (79%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA AP + GV H+GGDMF+++PS DAIFMKW++ W D++C IL++C A
Sbjct: 120 GINYDLPHVVATAPHLPGVEHMGGDMFETVPSADAIFMKWIMHDWGDEDCIKILKSCRKA 299
Query: 451 LPDGGKLV 428
+P+ GKL+
Sbjct: 300 IPETGKLI 323
Score = 36.3 bits (73), Expect(3) = 2e-030
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF G+ +LVD+GG +G + I+R P+I
Sbjct: 30 GFDGLTSLVDIGGGTGTAIAEIVRAYPSI 116
Score = 23.1 bits (44), Expect(3) = 2e-030
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -1 / +3
Query: 352 VMTPYRTQGRERSEEEFRHL 293
VM + + G+ER+EEE++ +
Sbjct: 432 VMVAHCSGGKERTEEEWKKI 491
>gb|BX678762.1|BX678762 BX678762 RS Pinus pinaster cDNA clone RS14G09, mRNA sequence
Length = 549
Score = 111 bits (237), Expect(3) = 2e-030
Identities = 39/68 (57%), Positives = 54/68 (79%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA AP + GV H+GGDMF+++PS DAIFMKW++ W D++C IL++C A
Sbjct: 120 GINYDLPHVVATAPHLPGVEHMGGDMFETVPSADAIFMKWIMHDWGDEDCIKILKSCRKA 299
Query: 451 LPDGGKLV 428
+P+ GKL+
Sbjct: 300 IPETGKLI 323
Score = 36.3 bits (73), Expect(3) = 2e-030
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF G+ +LVD+GG +G + I+R P+I
Sbjct: 30 GFDGLTSLVDIGGGTGTAIAEIVRAYPSI 116
Score = 23.1 bits (44), Expect(3) = 2e-030
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -1 / +3
Query: 352 VMTPYRTQGRERSEEEFRHL 293
VM + + G+ER+EEE++ +
Sbjct: 432 VMVAHCSGGKERTEEEWKKI 491
>gb|CF664309.1|CF664309 RTCNT1_9_A12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_9_A12_A029 3', mRNA sequence
Length = 649
Score = 114 bits (244), Expect(3) = 2e-030
Identities = 41/74 (55%), Positives = 59/74 (79%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA A S++GV+HVGGDMF+++P+GDAIFMKW++ W ++C IL+NC A
Sbjct: 100 GINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNVEDCIKILQNCRKA 279
Query: 451 LPDGGKLVACEPVV 410
+PD GK++ + V+
Sbjct: 280 IPDTGKVIIVDVVL 321
Score = 31.8 bits (63), Expect(3) = 2e-030
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / +1
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF + +LVDVGG +G + I+R P I
Sbjct: 10 GFHSLNSLVDVGGGTGTSVAEIVRAYPFI 96
Score = 24.0 bits (46), Expect(3) = 2e-030
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -1 / +1
Query: 352 VMTPYRTQGRERSEEEFRHL 293
VM + + G+ERSE+E++ +
Sbjct: 400 VMVAHSSGGKERSEKEWKRI 459
>gb|DR101310.1|DR101310 STRR1_72_B03.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_72_B03_A033 3', mRNA sequence
Length = 734
Score = 100 bits (214), Expect(3) = 4e-030
Identities = 41/87 (47%), Positives = 54/87 (62%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN DLP V+A AP I GV H+ G+MF+ IPS DA+ MKW+L W D+EC +LR A
Sbjct: 152 GINLDLPHVIATAPPITGVEHMEGNMFEHIPSADAVMMKWILHDWADEECVKLLRRSYDA 331
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRAL 371
P GK++ E VV + + +R L
Sbjct: 332 TPAKGKVLIVEAVVEGDKEGESMSRRL 412
Score = 40.0 bits (81), Expect(3) = 4e-030
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = -1 / +2
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF+ VATLVDVGG G+ L +I++ P I
Sbjct: 62 GFKSVATLVDVGGGMGSALSIIVKEHPHI 148
Score = 28.6 bits (56), Expect(3) = 4e-030
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1 / +2
Query: 349 MTPYRTQGRERSEEEFRHL 293
M Y T G+ER+EEEF+ L
Sbjct: 434 MMAYTTGGKERTEEEFKGL 490
>gb|CF390447.1|CF390447 RTDR2_19_C10.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_19_C10_A021 5', mRNA
sequence
Length = 847
Score = 119 bits (254), Expect(2) = 5e-030
Identities = 42/74 (56%), Positives = 60/74 (81%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA A S++GV+HVGGDMF+++P+GDAIFMKW++ W D++C IL+NC A
Sbjct: 322 GINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKA 501
Query: 451 LPDGGKLVACEPVV 410
+PD GK++ + V+
Sbjct: 502 IPDTGKVIIVDVVL 543
Score = 32.2 bits (64), Expect(2) = 5e-030
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / +1
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF + +LVDVGG +G + I+R P I
Sbjct: 232 GFHSLNSLVDVGGGTGTAVAEIVRAYPFI 318
>gb|DR385848.1|DR385848 RTHG1_11_F05.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_11_F05_A029 3', mRNA sequence
Length = 757
Score = 119 bits (254), Expect(2) = 5e-030
Identities = 42/74 (56%), Positives = 60/74 (81%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA A S++GV+HVGGDMF+++P+GDAIFMKW++ W D++C IL+NC A
Sbjct: 249 GINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKA 428
Query: 451 LPDGGKLVACEPVV 410
+PD GK++ + V+
Sbjct: 429 IPDTGKVIIVDVVL 470
Score = 32.2 bits (64), Expect(2) = 5e-030
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF + +LVDVGG +G + I+R P I
Sbjct: 159 GFHSLNSLVDVGGGTGTAVAEIVRAYPFI 245
>gb|CF387392.1|CF387392 RTDR1_12_B04.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_12_B04_A015 5', mRNA
sequence
Length = 752
Score = 119 bits (254), Expect(2) = 5e-030
Identities = 42/74 (56%), Positives = 60/74 (81%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA A S++GV+HVGGDMF+++P+GDAIFMKW++ W D++C IL+NC A
Sbjct: 432 GINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKA 611
Query: 451 LPDGGKLVACEPVV 410
+PD GK++ + V+
Sbjct: 612 IPDTGKVIIVDVVL 653
Score = 32.2 bits (64), Expect(2) = 5e-030
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF + +LVDVGG +G + I+R P I
Sbjct: 342 GFHSLNSLVDVGGGTGTAVAEIVRAYPFI 428
>gb|CF400142.1|CF400142 RTWW1_3_A06.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_3_A06_A015 5', mRNA sequence
Length = 722
Score = 119 bits (254), Expect(2) = 5e-030
Identities = 42/74 (56%), Positives = 60/74 (81%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA A S++GV+HVGGDMF+++P+GDAIFMKW++ W D++C IL+NC A
Sbjct: 356 GINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKA 535
Query: 451 LPDGGKLVACEPVV 410
+PD GK++ + V+
Sbjct: 536 IPDTGKVIIVDVVL 577
Score = 32.2 bits (64), Expect(2) = 5e-030
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / +2
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF + +LVDVGG +G + I+R P I
Sbjct: 266 GFHSLNSLVDVGGGTGTAVAEIVRAYPFI 352
>gb|CF477891.1|CF477891 RTWW3_13_E06.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_13_E06_A022 5', mRNA sequence
Length = 721
Score = 119 bits (254), Expect(2) = 5e-030
Identities = 42/74 (56%), Positives = 60/74 (81%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA A S++GV+HVGGDMF+++P+GDAIFMKW++ W D++C IL+NC A
Sbjct: 483 GINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKA 662
Query: 451 LPDGGKLVACEPVV 410
+PD GK++ + V+
Sbjct: 663 IPDTGKVIIVDVVL 704
Score = 32.2 bits (64), Expect(2) = 5e-030
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF + +LVDVGG +G + I+R P I
Sbjct: 393 GFHSLNSLVDVGGGTGTAVAEIVRAYPFI 479
>gb|CF385259.1|CF385259 RTDR1_2_H01.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_2_H01_A015 5', mRNA
sequence
Length = 671
Score = 119 bits (254), Expect(2) = 5e-030
Identities = 42/74 (56%), Positives = 60/74 (81%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA A S++GV+HVGGDMF+++P+GDAIFMKW++ W D++C IL+NC A
Sbjct: 412 GINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKA 591
Query: 451 LPDGGKLVACEPVV 410
+PD GK++ + V+
Sbjct: 592 IPDTGKVIIVDVVL 633
Score = 32.2 bits (64), Expect(2) = 5e-030
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / +1
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF + +LVDVGG +G + I+R P I
Sbjct: 322 GFHSLNSLVDVGGGTGTAVAEIVRAYPFI 408
>gb|CF478857.1|CF478857 RTWW3_15_E06.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_15_E06_A022 5', mRNA sequence
Length = 662
Score = 119 bits (254), Expect(2) = 5e-030
Identities = 42/74 (56%), Positives = 60/74 (81%)
Frame = -1 / -3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA A S++GV+HVGGDMF+++P+GDAIFMKW++ W D++C IL+NC A
Sbjct: 510 GINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKA 331
Query: 451 LPDGGKLVACEPVV 410
+PD GK++ + V+
Sbjct: 330 IPDTGKVIIVDVVL 289
Score = 32.2 bits (64), Expect(2) = 5e-030
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / -3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF + +LVDVGG +G + I+R P I
Sbjct: 600 GFHSLNSLVDVGGGTGTAVAEIVRAYPFI 514
>gb|CF387289.1|CF387289 RTDR1_12_B04.b1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_12_B04_A015 3', mRNA
sequence
Length = 641
Score = 119 bits (254), Expect(2) = 5e-030
Identities = 42/74 (56%), Positives = 60/74 (81%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA A S++GV+HVGGDMF+++P+GDAIFMKW++ W D++C IL+NC A
Sbjct: 135 GINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKA 314
Query: 451 LPDGGKLVACEPVV 410
+PD GK++ + V+
Sbjct: 315 IPDTGKVIIVDVVL 356
Score = 32.2 bits (64), Expect(2) = 5e-030
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF + +LVDVGG +G + I+R P I
Sbjct: 45 GFHSLNSLVDVGGGTGTAVAEIVRAYPFI 131
>gb|CF398420.1|CF398420 RTDS3_12_G12.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_12_G12_A022 5', mRNA sequence
Length = 609
Score = 119 bits (254), Expect(2) = 5e-030
Identities = 42/74 (56%), Positives = 60/74 (81%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA A S++GV+HVGGDMF+++P+GDAIFMKW++ W D++C IL+NC A
Sbjct: 123 GINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKA 302
Query: 451 LPDGGKLVACEPVV 410
+PD GK++ + V+
Sbjct: 303 IPDTGKVIIVDVVL 344
Score = 32.2 bits (64), Expect(2) = 5e-030
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF + +LVDVGG +G + I+R P I
Sbjct: 33 GFHSLNSLVDVGGGTGTAVAEIVRAYPFI 119
>gb|CF665309.1|CF665309 RTCNT1_15_E12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_15_E12_A029 3', mRNA sequence
Length = 592
Score = 119 bits (254), Expect(2) = 5e-030
Identities = 42/74 (56%), Positives = 60/74 (81%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA A S++GV+HVGGDMF+++P+GDAIFMKW++ W D++C IL+NC A
Sbjct: 100 GINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKA 279
Query: 451 LPDGGKLVACEPVV 410
+PD GK++ + V+
Sbjct: 280 IPDTGKVIIVDVVL 321
Score = 32.2 bits (64), Expect(2) = 5e-030
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / +1
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF + +LVDVGG +G + I+R P I
Sbjct: 10 GFHSLNSLVDVGGGTGTAVAEIVRAYPFI 96
>gb|AI812857.1|AI812857 20G9 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 535
Score = 119 bits (254), Expect(2) = 5e-030
Identities = 42/74 (56%), Positives = 60/74 (81%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA A S++GV+HVGGDMF+++P+GDAIFMKW++ W D++C IL+NC A
Sbjct: 258 GINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKA 437
Query: 451 LPDGGKLVACEPVV 410
+PD GK++ + V+
Sbjct: 438 IPDTGKVIIVDVVL 479
Score = 32.2 bits (64), Expect(2) = 5e-030
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF + +LVDVGG +G + I+R P I
Sbjct: 168 GFHSLNSLVDVGGGTGTAVAEIVRAYPFI 254
>gb|DR165285.1|DR165285 RTPHOS1_4_A06.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_4_A06_A029 3', mRNA sequence
Length = 530
Score = 124 bits (265), Expect(2) = 5e-030
Identities = 46/95 (48%), Positives = 64/95 (67%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFD+P VV AP V+HVGGDMF S+PSG AIFMKW+L W+DD C +L+NC A
Sbjct: 5 GINFDMPHVVVDAPHYPAVKHVGGDMFDSVPSGQAIFMKWILHDWSDDHCLRLLKNCHKA 184
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVM 347
LP+ GK++ + ++P ++SP R D+ ++
Sbjct: 185 LPEKGKVIVVDTILPVAAETSPYARQGFHIDLLML 289
Score = 27.2 bits (53), Expect(2) = 5e-030
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1 / +2
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y G+ER+E+EFR L
Sbjct: 281 LMLAYNPGGKERTEQEFRDL 340
>gb|DR118474.1|DR118474 RTMG1_17_F04.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_F04_A029 3', mRNA sequence
Length = 775
Score = 100 bits (213), Expect(3) = 6e-030
Identities = 41/87 (47%), Positives = 54/87 (62%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN DLP V+A AP I GV H+ G+MF+ IPS DA+ MKW+L W D+EC +LR A
Sbjct: 192 GINLDLPHVIATAPPITGVEHMEGNMFEHIPSADAVMMKWILHDWPDEECVKLLRRSYDA 371
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRAL 371
P GK++ E VV + + +R L
Sbjct: 372 TPAKGKVLIVEAVVEGDKEGESMSRRL 452
Score = 40.0 bits (81), Expect(3) = 6e-030
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF+ VATLVDVGG G+ L +I++ P I
Sbjct: 102 GFKSVATLVDVGGGMGSALSIIVKEHPHI 188
Score = 28.6 bits (56), Expect(3) = 6e-030
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1 / +3
Query: 349 MTPYRTQGRERSEEEFRHL 293
M Y T G+ER+EEEF+ L
Sbjct: 474 MMAYTTGGKERTEEEFKGL 530
>gb|DR025455.1|DR025455 STRS1_71_E09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_71_E09_A034 5', mRNA sequence
Length = 665
Score = 100 bits (213), Expect(3) = 6e-030
Identities = 41/87 (47%), Positives = 54/87 (62%)
Frame = -1 / -3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN DLP V+A AP I GV H+ G+MF+ IPS DA+ MKW+L W D+EC +LR A
Sbjct: 426 GINLDLPHVIATAPPITGVEHMEGNMFEHIPSADAVMMKWILHDWPDEECVKLLRRSYDA 247
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRAL 371
P GK++ E VV + + +R L
Sbjct: 246 TPAKGKVLIVEAVVEGDKEGESMSRRL 166
Score = 40.0 bits (81), Expect(3) = 6e-030
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = -1 / -3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF+ VATLVDVGG G+ L +I++ P I
Sbjct: 516 GFKSVATLVDVGGGMGSALSIIVKEHPHI 430
Score = 28.6 bits (56), Expect(3) = 6e-030
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1 / -3
Query: 349 MTPYRTQGRERSEEEFRHL 293
M Y T G+ER+EEEF+ L
Sbjct: 144 MMAYTTGGKERTEEEFKGL 88
>gb|CF665472.1|CF665472 RTCNT1_16_E12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_16_E12_A029 3', mRNA sequence
Length = 597
Score = 117 bits (251), Expect(2) = 1e-029
Identities = 41/68 (60%), Positives = 57/68 (83%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP VVA A S++GV+HVGGDMF+++P+GDAIFMKW++ W D++C IL+NC A
Sbjct: 100 GINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKA 279
Query: 451 LPDGGKLV 428
+PD GK++
Sbjct: 280 IPDTGKVI 303
Score = 32.2 bits (64), Expect(2) = 1e-029
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / +1
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF + +LVDVGG +G + I+R P I
Sbjct: 10 GFHSLNSLVDVGGGTGTAVAEIVRAYPFI 96
>gb|CX646520.1|CX646520 COLD1_9_H01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_9_H01_A029 5', mRNA sequence
Length = 830
Score = 100 bits (213), Expect(3) = 1e-029
Identities = 41/87 (47%), Positives = 54/87 (62%)
Frame = -1 / -2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN DLP V+A AP I GV H+ G+MF+ IPS DA+ MKW+L W D+EC +LR A
Sbjct: 595 GINLDLPHVIATAPLITGVEHMEGNMFEHIPSADAVMMKWILHDWADEECVKLLRRSYDA 416
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRAL 371
P GK++ E VV + + +R L
Sbjct: 415 TPAKGKVLIVEAVVEGDKEGESMSRRL 335
Score = 38.6 bits (78), Expect(3) = 1e-029
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -1 / -2
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF+ +ATLVDVGG G+ L +I++ P I
Sbjct: 685 GFKSMATLVDVGGGMGSALSIIVKEHPHI 599
Score = 28.6 bits (56), Expect(3) = 1e-029
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1 / -2
Query: 349 MTPYRTQGRERSEEEFRHL 293
M Y T G+ER+EEEF+ L
Sbjct: 313 MMAYTTGGKERTEEEFKGL 257
>gb|CX648030.1|CX648030 COLD1_26_C06.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_26_C06_A029 3', mRNA sequence
Length = 820
Score = 101 bits (216), Expect(3) = 1e-029
Identities = 41/87 (47%), Positives = 55/87 (63%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN DLP V+A AP I GV+H+ G+MF+ IPS DA+ MKW+L W D+EC +LR A
Sbjct: 231 GINLDLPHVIATAPPITGVKHMEGNMFEHIPSADAVMMKWILHDWADEECVKLLRRSYDA 410
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRAL 371
P GK++ E VV + + +R L
Sbjct: 411 TPAKGKVLIVEAVVEGDKEGESMSRRL 491
Score = 37.3 bits (75), Expect(3) = 1e-029
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTI 638
GF +ATLVDVGG G+ L +I++ P I
Sbjct: 141 GFMSMATLVDVGGGMGSALSIIVKEHPHI 227
Score = 28.6 bits (56), Expect(3) = 1e-029
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1 / +3
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M Y T G+ER+EEEF+ L
Sbjct: 510 LMMVYTTGGKERTEEEFKGL 569
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 346,336,458
Number of Sequences: 355925
Number of extensions: 4432199
Number of successful extensions: 39557
Number of sequences better than 1.0e-020: 176
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 11268787805
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)