TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3203838.2.1
(534 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX253572.1|BX253572 BX253572 Pinus pinaster differenciat... 119 1e-026
gb|CO169734.1|CO169734 NDL1_9_F07.b1_A029 Needles control P... 116 1e-025
gb|DR099866.1|DR099866 STRR1_59_F07.b1_A033 Stem Response R... 116 1e-025
gb|DR100033.1|DR100033 STRR1_61_C09.b1_A033 Stem Response R... 116 1e-025
gb|CO160953.1|CO160953 FLD1_25_D12.g1_A029 Root flooded Pin... 115 2e-025
gb|CO197919.1|CO197919 GEO1_10_B09.b1_A029 Root gravitropis... 115 2e-025
gb|CO362430.1|CO362430 RTK1_3_B05.g1_A029 Roots minus potas... 115 2e-025
gb|CO363973.1|CO363973 RTK1_12_H06.g1_A029 Roots minus pota... 115 2e-025
gb|CO366954.1|CO366954 RTK1_31_F04.b1_A029 Roots minus pota... 115 2e-025
gb|CO370342.1|CO370342 RTK1_67_F08.b1_A029 Roots minus pota... 115 2e-025
gb|CV033406.1|CV033406 RTNACL1_34_G09.b1_A029 Roots plus ad... 115 2e-025
gb|CV036294.1|CV036294 RTNACL1_58_D08.b1_A029 Roots plus ad... 115 2e-025
gb|CX645531.1|CX645531 COLD1_3_A03.g1_A029 Root cold Pinus ... 115 2e-025
gb|DR016802.1|DR016802 STRS1_12_F10.b1_A034 Shoot tip pitch... 115 2e-025
gb|DR024500.1|DR024500 STRS1_65_H09.b1_A034 Shoot tip pitch... 115 2e-025
gb|DR052064.1|DR052064 RTCA1_2_E06.b1_A029 Roots minus calc... 115 2e-025
gb|DR060181.1|DR060181 RTNIT1_26_F02.b1_A029 Roots minus ni... 115 2e-025
gb|DR069884.1|DR069884 RTDK1_10_B03.b1_A029 Roots, dark Pin... 115 2e-025
gb|DR019857.1|DR019857 STRS1_32_H09.g1_A034 Shoot tip pitch... 115 3e-025
gb|CO175199.1|CO175199 NDL1_53_E04.b1_A029 Needles control ... 114 4e-025
gb|CO166296.1|CO166296 FLD1_61_A03.b1_A029 Root flooded Pin... 113 8e-025
gb|DR069279.1|DR069279 RTDK1_6_D07.b1_A029 Roots, dark Pinu... 113 8e-025
gb|BX254594.1|BX254594 BX254594 Pinus pinaster differenciat... 112 2e-024
gb|CF397573.1|CF397573 RTDS3_4_D09.b2_A022 Drought-stressed... 111 3e-024
gb|CO171876.1|CO171876 NDL1_25_G07.b1_A029 Needles control ... 111 3e-024
gb|CO171938.1|CO171938 NDL1_25_G07.g1_A029 Needles control ... 111 3e-024
gb|DR020347.1|DR020347 STRS1_36_G04.b1_A034 Shoot tip pitch... 111 3e-024
gb|DR072747.1|DR072747 RTDK1_28_G08.b1_A029 Roots, dark Pin... 111 3e-024
gb|DR090566.1|DR090566 RTAL1_16_A10.b1_A029 Roots plus adde... 111 3e-024
gb|DR111100.1|DR111100 RTS1_15_F07.b1_A029 Roots minus sulf... 111 3e-024
gb|CO171261.1|CO171261 NDL1_20_F04.b1_A029 Needles control ... 111 5e-024
gb|CO171332.1|CO171332 NDL1_20_F04.g1_A029 Needles control ... 111 5e-024
gb|CF397050.1|CF397050 RTDS2_26_E04.b1_A021 Drought-stresse... 109 2e-023
gb|CO173255.1|CO173255 NDL1_35_B06.b1_A029 Needles control ... 107 5e-023
gb|CV036390.1|CV036390 RTNACL1_59_A05.b1_A029 Roots plus ad... 107 5e-023
gb|CV036465.1|CV036465 RTNACL1_59_A05.g1_A029 Roots plus ad... 107 5e-023
gb|CX652103.1|CX652103 COLD1_57_A03.b1_A029 Root cold Pinus... 107 5e-023
gb|CX652175.1|CX652175 COLD1_57_A03.g1_A029 Root cold Pinus... 107 5e-023
gb|DR015524.1|DR015524 STRS1_4_B11.b1_A034 Shoot tip pitch ... 107 5e-023
gb|DR169140.1|DR169140 RTPHOS1_30_G10.b1_A029 Roots minus p... 107 5e-023
gb|CF473352.1|CF473352 RTWW2_2_B10.b1_A021 Well-watered lob... 106 9e-023
gb|CF664091.1|CF664091 RTCNT1_7_F10.b1_A029 Root control Pi... 106 9e-023
gb|CO170743.1|CO170743 NDL1_16_C08.g1_A029 Needles control ... 106 9e-023
gb|CO363561.1|CO363561 RTK1_10_B03.g1_A029 Roots minus pota... 106 9e-023
gb|CO370352.1|CO370352 RTK1_67_G06.b1_A029 Roots minus pota... 106 9e-023
gb|CX650044.1|CX650044 COLD1_43_E01.b1_A029 Root cold Pinus... 106 9e-023
gb|CX650124.1|CX650124 COLD1_43_E01.g1_A029 Root cold Pinus... 106 9e-023
gb|CX651460.1|CX651460 COLD1_52_C03.g1_A029 Root cold Pinus... 106 9e-023
gb|DR025430.1|DR025430 STRS1_71_C07.g1_A034 Shoot tip pitch... 106 9e-023
gb|DR070252.1|DR070252 RTDK1_12_E08.b1_A029 Roots, dark Pin... 106 9e-023
gb|DR077972.1|DR077972 RTFEPL1_1_D02.b1_A029 Roots plus add... 106 9e-023
gb|DR088926.1|DR088926 RTAL1_5_B08.g1_A029 Roots plus added... 106 9e-023
gb|DR090907.1|DR090907 RTAL1_18_D05.b1_A029 Roots plus adde... 106 9e-023
gb|DR099061.1|DR099061 STRR1_52_H04.b1_A033 Stem Response R... 106 9e-023
gb|DR745959.1|DR745959 RTCU1_33_E11.g1_A029 Roots plus adde... 106 9e-023
gb|U62394.1|PRU62394 Pinus radiata cinnamyl alcohol dehydro... 106 9e-023
dbj|BD224347.1| Materials and methods for the modification ... 106 9e-023
dbj|BD224371.1| Materials and methods for the modification ... 106 9e-023
dbj|BD224569.1| Materials and methods for the modification ... 106 9e-023
dbj|BD273009.1| Materials and methods for the modification ... 106 9e-023
gb|CF473030.1|CF473030 RTDS1_1_F04.b1_A015 Drought-stressed... 106 1e-022
gb|CO368027.1|CO368027 RTK1_38_E04.b1_A029 Roots minus pota... 106 1e-022
gb|CO368110.1|CO368110 RTK1_38_E04.g1_A029 Roots minus pota... 106 1e-022
gb|CV035326.1|CV035326 RTNACL1_15_G05.b1_A029 Roots plus ad... 106 1e-022
gb|CV035439.1|CV035439 RTNACL1_16_D03.b1_A029 Roots plus ad... 106 1e-022
gb|DR025056.1|DR025056 STRS1_69_G05.b1_A034 Shoot tip pitch... 106 1e-022
gb|DR025137.1|DR025137 STRS1_69_G05.g1_A034 Shoot tip pitch... 106 1e-022
gb|DR050368.1|DR050368 RTBOR1_23_B03.b1_A029 Roots plus add... 106 1e-022
gb|DR097036.1|DR097036 STRR1_32_C01.b1_A033 Stem Response R... 106 1e-022
emb|Z37991.1|PTCADAMR P.taeda mRNA for cinnamyl alcohol deh... 105 2e-022
gb|CF397221.1|CF397221 RTDS3_2_G11.b2_A022 Drought-stressed... 104 4e-022
gb|CF399665.1|CF399665 RTDS3_25_F09.b1_A022 Drought-stresse... 104 4e-022
emb|Z37992.1|PTCADBMR P.taeda mRNA for cinnamyl alcohol deh... 104 4e-022
dbj|BD224283.1| Materials and methods for the modification ... 103 1e-021
gb|CF669009.1|CF669009 RTCNT1_40_B07.b1_A029 Root control P... 85 2e-021
gb|DN615202.1|DN615202 EST968252 Subtracted pine embryo lib... 100 6e-021
gb|DT629616.1|DT629616 EST1156186 Subtracted pine embryo li... 100 6e-021
gb|DT627778.1|DT627778 EST1156527 Subtracted pine embryo li... 100 8e-021
>gb|BX253572.1|BX253572 BX253572 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP085D03, mRNA sequence
Length = 503
Score = 119 bits (255), Expect = 1e-026
Identities = 47/94 (50%), Positives = 70/94 (74%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + A SL++G K + GS +G I++TQEM++F KH +T
Sbjct: 70 ISLLKVNGKLVLVGIPEKPLSLPAVSLLSGRKFVGGSAIGGIKETQEMLEFCGKHNITCM 249
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN AMERL KG+V+YRFVI++ + +
Sbjct: 250 IENITIDYVNTAMERLVKGDVKYRFVINVAESFS 351
>gb|CO169734.1|CO169734 NDL1_9_F07.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_9_F07_A029 3', mRNA sequence
Length = 691
Score = 116 bits (248), Expect = 1e-025
Identities = 47/92 (51%), Positives = 67/92 (72%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++++GLPEKP+Q +A S+V G + + GS +G +++TQEM+DF +H +
Sbjct: 258 LNLLKVNGKLVIVGLPEKPVQFAAPSVVMGRRFVGGSLIGGVKETQEMLDFCGEHNICCM 437
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE I E VN AMERL KG+V+YRFVID+ +
Sbjct: 438 IEKIPVEYVNTAMERLVKGDVQYRFVIDVARS 533
>gb|DR099866.1|DR099866 STRR1_59_F07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_59_F07_A033 3', mRNA sequence
Length = 760
Score = 116 bits (248), Expect = 1e-025
Identities = 46/94 (48%), Positives = 69/94 (73%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+GLPEKPL + +L +G K + GS +G I++TQEM++F KH ++
Sbjct: 377 ISLLKVNGKLVLVGLPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLEFCGKHNISCM 556
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN AMERLAKG+V+YRFVI++ + +
Sbjct: 557 IENIPIDYVNTAMERLAKGDVKYRFVINVAESFS 658
>gb|DR100033.1|DR100033 STRR1_61_C09.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_61_C09_A033 3', mRNA sequence
Length = 779
Score = 116 bits (248), Expect = 1e-025
Identities = 46/94 (48%), Positives = 69/94 (73%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+GLPEKPL + +L +G K + GS +G I++TQEM++F KH ++
Sbjct: 395 ISLLKVNGKLVLVGLPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLEFCGKHNISCM 574
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN AMERLAKG+V+YRFVI++ + +
Sbjct: 575 IENIPIDYVNTAMERLAKGDVKYRFVINVAESFS 676
>gb|CO160953.1|CO160953 FLD1_25_D12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_25_D12_A029 5', mRNA sequence
Length = 534
Score = 115 bits (246), Expect = 2e-025
Identities = 45/94 (47%), Positives = 69/94 (73%)
Frame = -2 / -3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM+DF KH ++
Sbjct: 346 ISLLKVNGKLVLVGMPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLDFCGKHNISCM 167
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN A+ERLAKG+V+YRFVI++ + +
Sbjct: 166 IENIPIDYVNTAIERLAKGDVKYRFVINVAESFS 65
>gb|CO197919.1|CO197919 GEO1_10_B09.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_10_B09_A029 3', mRNA sequence
Length = 481
Score = 115 bits (246), Expect = 2e-025
Identities = 45/94 (47%), Positives = 69/94 (73%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM+DF KH ++
Sbjct: 89 ISLLKVNGKLVLVGMPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLDFCGKHNISCM 268
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN A+ERLAKG+V+YRFVI++ + +
Sbjct: 269 IENIPIDYVNTAIERLAKGDVKYRFVINVAESFS 370
>gb|CO362430.1|CO362430 RTK1_3_B05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_3_B05_A029 5', mRNA sequence
Length = 774
Score = 115 bits (246), Expect = 2e-025
Identities = 45/94 (47%), Positives = 69/94 (73%)
Frame = -2 / -1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM+DF KH ++
Sbjct: 348 ISLLKVNGKLVLVGMPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLDFCGKHNISCM 169
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN A+ERLAKG+V+YRFVI++ + +
Sbjct: 168 IENIPIDYVNTAIERLAKGDVKYRFVINVAESFS 67
>gb|CO363973.1|CO363973 RTK1_12_H06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_12_H06_A029 5', mRNA sequence
Length = 746
Score = 115 bits (246), Expect = 2e-025
Identities = 45/94 (47%), Positives = 69/94 (73%)
Frame = -2 / -2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM+DF KH ++
Sbjct: 364 ISLLKVNGKLVLVGMPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLDFCGKHNISCM 185
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN A+ERLAKG+V+YRFVI++ + +
Sbjct: 184 IENIPIDYVNTAIERLAKGDVKYRFVINVAESFS 83
>gb|CO366954.1|CO366954 RTK1_31_F04.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_31_F04_A029 3', mRNA sequence
Length = 917
Score = 115 bits (246), Expect = 2e-025
Identities = 45/94 (47%), Positives = 69/94 (73%)
Frame = -2 / -1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM+DF KH ++
Sbjct: 287 ISLLKVNGKLVLVGMPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLDFCGKHNISCM 108
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN A+ERLAKG+V+YRFVI++ + +
Sbjct: 107 IENIPIDYVNTAIERLAKGDVKYRFVINVAESFS 6
>gb|CO370342.1|CO370342 RTK1_67_F08.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_67_F08_A029 3', mRNA sequence
Length = 761
Score = 115 bits (246), Expect = 2e-025
Identities = 45/94 (47%), Positives = 69/94 (73%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM+DF KH ++
Sbjct: 399 ISLLKVNGKLVLVGMPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLDFCGKHNISCM 578
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN A+ERLAKG+V+YRFVI++ + +
Sbjct: 579 IENIPIDYVNTAIERLAKGDVKYRFVINVAESFS 680
>gb|CV033406.1|CV033406 RTNACL1_34_G09.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_34_G09_A029 3', mRNA sequence
Length = 763
Score = 115 bits (246), Expect = 2e-025
Identities = 45/94 (47%), Positives = 69/94 (73%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM+DF KH ++
Sbjct: 374 ISLLKVNGKLVLVGMPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLDFCGKHNISCM 553
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN A+ERLAKG+V+YRFVI++ + +
Sbjct: 554 IENIPIDYVNTAIERLAKGDVKYRFVINVAESFS 655
>gb|CV036294.1|CV036294 RTNACL1_58_D08.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_58_D08_A029 3', mRNA sequence
Length = 805
Score = 115 bits (246), Expect = 2e-025
Identities = 45/94 (47%), Positives = 69/94 (73%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM+DF KH ++
Sbjct: 420 ISLLKVNGKLVLVGMPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLDFCGKHNISCM 599
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN A+ERLAKG+V+YRFVI++ + +
Sbjct: 600 IENIPIDYVNTAIERLAKGDVKYRFVINVAESFS 701
>gb|CX645531.1|CX645531 COLD1_3_A03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_3_A03_A029 5', mRNA sequence
Length = 551
Score = 115 bits (246), Expect = 2e-025
Identities = 45/94 (47%), Positives = 69/94 (73%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM+DF KH ++
Sbjct: 193 ISLLKVNGKLVLVGMPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLDFCGKHNISCM 372
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN A+ERLAKG+V+YRFVI++ + +
Sbjct: 373 IENIPIDYVNTAIERLAKGDVKYRFVINVAESFS 474
>gb|DR016802.1|DR016802 STRS1_12_F10.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_12_F10_A034 3', mRNA sequence
Length = 831
Score = 115 bits (246), Expect = 2e-025
Identities = 45/94 (47%), Positives = 69/94 (73%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM+DF KH ++
Sbjct: 469 ISLLKVNGKLVLVGMPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLDFCGKHNISCM 648
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN A+ERLAKG+V+YRFVI++ + +
Sbjct: 649 IENIPIDYVNTAIERLAKGDVKYRFVINVAESFS 750
>gb|DR024500.1|DR024500 STRS1_65_H09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_65_H09_A034 3', mRNA sequence
Length = 734
Score = 115 bits (246), Expect = 2e-025
Identities = 45/94 (47%), Positives = 69/94 (73%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM+DF KH ++
Sbjct: 370 ISLLKVNGKLVLVGMPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLDFCGKHNISCM 549
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN A+ERLAKG+V+YRFVI++ + +
Sbjct: 550 IENIPIDYVNTAIERLAKGDVKYRFVINVAESFS 651
>gb|DR052064.1|DR052064 RTCA1_2_E06.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_2_E06_A029 3', mRNA sequence
Length = 756
Score = 115 bits (246), Expect = 2e-025
Identities = 45/94 (47%), Positives = 69/94 (73%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM+DF KH ++
Sbjct: 374 ISLLKVNGKLVLVGMPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLDFCGKHNISCM 553
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN A+ERLAKG+V+YRFVI++ + +
Sbjct: 554 IENIPIDYVNTAIERLAKGDVKYRFVINVAESFS 655
>gb|DR060181.1|DR060181 RTNIT1_26_F02.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_26_F02_A029 3', mRNA sequence
Length = 683
Score = 115 bits (246), Expect = 2e-025
Identities = 45/94 (47%), Positives = 69/94 (73%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM+DF KH ++
Sbjct: 319 ISLLKVNGKLVLVGMPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLDFCGKHNISCM 498
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN A+ERLAKG+V+YRFVI++ + +
Sbjct: 499 IENIPIDYVNTAIERLAKGDVKYRFVINVAESFS 600
>gb|DR069884.1|DR069884 RTDK1_10_B03.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_10_B03_A029 3', mRNA sequence
Length = 625
Score = 115 bits (246), Expect = 2e-025
Identities = 46/92 (50%), Positives = 68/92 (73%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL +L +GGK + GS +G I++TQEM+DF KH ++
Sbjct: 243 ISLLKGNGKLVLVGMPEKPLFFPPGALTSGGKFVGGSAIGGIKETQEMLDFCGKHNISCM 422
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE I + VN A+ERLAKG+V+YRFVI++ +
Sbjct: 423 IENIPMDYVNTAIERLAKGDVKYRFVINVAES 518
>gb|DR019857.1|DR019857 STRS1_32_H09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_32_H09_A034 5', mRNA sequence
Length = 558
Score = 115 bits (245), Expect = 3e-025
Identities = 45/94 (47%), Positives = 69/94 (73%)
Frame = -2 / -2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM+DF KH ++
Sbjct: 341 ISLLKVNGKLVLVGMPEKPLSLPHVALTSGRKFVGGSAIGGIKETQEMLDFCGKHNISCM 162
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN A+ERLAKG+V+YRFVI++ + +
Sbjct: 161 IENIPIDYVNTAIERLAKGDVKYRFVINVAESFS 60
>gb|CO175199.1|CO175199 NDL1_53_E04.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_53_E04_A029 3', mRNA sequence
Length = 640
Score = 114 bits (244), Expect = 4e-025
Identities = 47/88 (53%), Positives = 65/88 (73%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++++GLPEKP+Q +A S+V G + + GS +G +++TQEM+DF +H +
Sbjct: 86 LNLLKVNGKLVIVGLPEKPVQFAAPSVVMGRRFVGGSLIGGVKETQEMLDFCGEHNICCM 265
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVID 240
IE I E VN AMERL KG+V+YRFVID
Sbjct: 266 IEKIPEEYVNTAMERLVKGDVKYRFVID 349
>gb|CO166296.1|CO166296 FLD1_61_A03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_61_A03_A029 3', mRNA sequence
Length = 680
Score = 113 bits (242), Expect = 8e-025
Identities = 44/94 (46%), Positives = 68/94 (72%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM++F KH ++
Sbjct: 339 ISLLKVNGKLVLVGMPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLEFCGKHNISCM 518
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN AMERL KG+V+YRFVI++ + +
Sbjct: 519 IENIPIDYVNTAMERLGKGDVKYRFVINVAESFS 620
>gb|DR069279.1|DR069279 RTDK1_6_D07.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_6_D07_A029 3', mRNA sequence
Length = 869
Score = 113 bits (242), Expect = 8e-025
Identities = 44/94 (46%), Positives = 68/94 (72%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
++LLK GK++L+G+PEKPL + +L +G K + GS +G I++TQEM++F KH ++
Sbjct: 490 ISLLKVNGKLVLVGMPEKPLSLPPVALTSGRKFVGGSAIGGIKETQEMLEFCGKHNISCM 669
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN AMERL KG+V+YRFVI++ + +
Sbjct: 670 IENIPIDYVNTAMERLGKGDVKYRFVINVAESFS 771
>gb|BX254594.1|BX254594 BX254594 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP100H04, mRNA sequence
Length = 663
Score = 112 bits (239), Expect = 2e-024
Identities = 45/97 (46%), Positives = 68/97 (70%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++L+GLPE PL +++G + + GS +G I++TQEM+DF A+H ++
Sbjct: 205 LNLLKVNGKLVLVGLPENPLSFHPAGVISGRRFVGGSSIGGIKETQEMLDFCAEHNISCM 384
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IE I + VN AMERL KG+V+YRFVI++ + + A+
Sbjct: 385 IENIPIDYVNTAMERLVKGDVKYRFVINVAESFSGAN 495
>gb|CF397573.1|CF397573 RTDS3_4_D09.b2_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_4_D09_A022 3', mRNA sequence
Length = 607
Score = 111 bits (238), Expect = 3e-024
Identities = 45/97 (46%), Positives = 68/97 (70%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++L+GLPE PL +++G + + GS +G I++TQEM+DF A+H ++
Sbjct: 92 LNLLKVNGKLVLVGLPENPLSFHPAGVISGRRFVGGSSIGGIKETQEMLDFCAEHNISCL 271
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IE I + VN AMERL KG+V+YRFVI++ + + A+
Sbjct: 272 IENIPIDYVNTAMERLVKGDVKYRFVINVAESFSGAN 382
>gb|CO171876.1|CO171876 NDL1_25_G07.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_25_G07_A029 3', mRNA sequence
Length = 817
Score = 111 bits (238), Expect = 3e-024
Identities = 45/97 (46%), Positives = 68/97 (70%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++L+GLPE PL +++G + + GS +G I++TQEM+DF A+H ++
Sbjct: 326 LNLLKVNGKLVLVGLPENPLSFHPAGVISGRRFVGGSSIGGIKETQEMLDFCAEHNISCL 505
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IE I + VN AMERL KG+V+YRFVI++ + + A+
Sbjct: 506 IENIPIDYVNTAMERLVKGDVKYRFVINVAESFSGAN 616
>gb|CO171938.1|CO171938 NDL1_25_G07.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_25_G07_A029 5', mRNA sequence
Length = 696
Score = 111 bits (238), Expect = 3e-024
Identities = 45/97 (46%), Positives = 68/97 (70%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++L+GLPE PL +++G + + GS +G I++TQEM+DF A+H ++
Sbjct: 397 LNLLKVNGKLVLVGLPENPLSFHPAGVISGRRFVGGSSIGGIKETQEMLDFCAEHNISCL 576
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IE I + VN AMERL KG+V+YRFVI++ + + A+
Sbjct: 577 IENIPIDYVNTAMERLVKGDVKYRFVINVAESFSGAN 687
>gb|DR020347.1|DR020347 STRS1_36_G04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_36_G04_A034 3', mRNA sequence
Length = 782
Score = 111 bits (238), Expect = 3e-024
Identities = 45/97 (46%), Positives = 68/97 (70%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++L+GLPE PL +++G + + GS +G I++TQEM+DF A+H ++
Sbjct: 92 LNLLKVNGKLVLVGLPENPLSFHPAGVISGRRFVGGSSIGGIKETQEMLDFCAEHNISCL 271
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IE I + VN AMERL KG+V+YRFVI++ + + A+
Sbjct: 272 IENIPIDYVNTAMERLVKGDVKYRFVINVAESFSGAN 382
>gb|DR072747.1|DR072747 RTDK1_28_G08.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_28_G08_A029 3', mRNA sequence
Length = 638
Score = 111 bits (238), Expect = 3e-024
Identities = 45/97 (46%), Positives = 68/97 (70%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++L+GLPE PL +++G + + GS +G I++TQEM+DF A+H ++
Sbjct: 25 LNLLKVNGKLVLVGLPENPLSFHPAGVISGRRFVGGSSIGGIKETQEMLDFCAEHNISCL 204
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IE I + VN AMERL KG+V+YRFVI++ + + A+
Sbjct: 205 IENIPIDYVNTAMERLVKGDVKYRFVINVAESFSGAN 315
>gb|DR090566.1|DR090566 RTAL1_16_A10.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_16_A10_A029 3', mRNA sequence
Length = 763
Score = 111 bits (238), Expect = 3e-024
Identities = 45/97 (46%), Positives = 68/97 (70%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++L+GLPE PL +++G + + GS +G I++TQEM+DF A+H ++
Sbjct: 231 LNLLKVNGKLVLVGLPENPLSFHPAGVISGRRFVGGSSIGGIKETQEMLDFCAEHNISCL 410
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IE I + VN AMERL KG+V+YRFVI++ + + A+
Sbjct: 411 IENIPIDYVNTAMERLVKGDVKYRFVINVAESFSGAN 521
>gb|DR111100.1|DR111100 RTS1_15_F07.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_15_F07_A029 3', mRNA sequence
Length = 608
Score = 111 bits (238), Expect = 3e-024
Identities = 45/97 (46%), Positives = 68/97 (70%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++L+GLPE PL +++G + + GS +G I++TQEM+DF A+H ++
Sbjct: 45 LNLLKVNGKLVLVGLPENPLSFHPAGVISGRRFVGGSSIGGIKETQEMLDFCAEHNISCL 224
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IE I + VN AMERL KG+V+YRFVI++ + + A+
Sbjct: 225 IENIPIDYVNTAMERLVKGDVKYRFVINVAESFSGAN 335
>gb|CO171261.1|CO171261 NDL1_20_F04.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_20_F04_A029 3', mRNA sequence
Length = 639
Score = 111 bits (236), Expect = 5e-024
Identities = 43/93 (46%), Positives = 66/93 (70%)
Frame = -2 / +1
Query: 497 LLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTADIE 318
LLK GK+IL+G+PEKP+ S++ G + + GS G +++TQEM+DF A+H ++ IE
Sbjct: 88 LLKVNGKLILVGMPEKPISFHPASVIFGRRIVGGSATGGVKETQEMLDFCAEHNISCMIE 267
Query: 317 LIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNA 219
I + VN A+ERL KG+V+YRFVID+ + ++
Sbjct: 268 NIAMDYVNTAIERLGKGDVKYRFVIDVTRSFSS 366
>gb|CO171332.1|CO171332 NDL1_20_F04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_20_F04_A029 5', mRNA sequence
Length = 843
Score = 111 bits (236), Expect = 5e-024
Identities = 43/93 (46%), Positives = 66/93 (70%)
Frame = -2 / +1
Query: 497 LLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTADIE 318
LLK GK+IL+G+PEKP+ S++ G + + GS G +++TQEM+DF A+H ++ IE
Sbjct: 337 LLKVNGKLILVGMPEKPISFHPASVIFGRRIVGGSATGGVKETQEMLDFCAEHNISCMIE 516
Query: 317 LIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNA 219
I + VN A+ERL KG+V+YRFVID+ + ++
Sbjct: 517 NIAMDYVNTAIERLGKGDVKYRFVIDVTRSFSS 615
>gb|CF397050.1|CF397050 RTDS2_26_E04.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_26_E04_A021 3', mRNA sequence
Length = 617
Score = 109 bits (232), Expect = 2e-023
Identities = 42/93 (45%), Positives = 65/93 (69%)
Frame = -2 / +3
Query: 497 LLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTADIE 318
LLK GK+IL+G+PEKP+ S++ G + + GS G +++TQEM+DF A+H ++ IE
Sbjct: 180 LLKVNGKLILVGMPEKPISFHPASVIFGRRIVGGSATGGVKETQEMLDFCAEHNISCMIE 359
Query: 317 LIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNA 219
I + VN +ERL KG+V+YRFVID+ + ++
Sbjct: 360 NIAMDYVNTTIERLGKGDVKYRFVIDVTRSFSS 458
>gb|CO173255.1|CO173255 NDL1_35_B06.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_35_B06_A029 3', mRNA sequence
Length = 669
Score = 107 bits (229), Expect = 5e-023
Identities = 42/94 (44%), Positives = 68/94 (72%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++++GLPE P+ ++++G + + GS +G I++TQEM+DF A+H +++
Sbjct: 229 LNLLKVNGKLVMVGLPENPVSFHPAAVISGRRFVGGSGIGGIKETQEMLDFCAEHNISSM 408
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN AMERL KG+V+YRFVI++ + +
Sbjct: 409 IENIPIDYVNTAMERLVKGDVKYRFVINVAESFS 510
>gb|CV036390.1|CV036390 RTNACL1_59_A05.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_59_A05_A029 3', mRNA sequence
Length = 727
Score = 107 bits (229), Expect = 5e-023
Identities = 42/94 (44%), Positives = 68/94 (72%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++++GLPE P+ ++++G + + GS +G I++TQEM+DF A+H +++
Sbjct: 231 LNLLKVNGKLVMVGLPENPVSFHPAAVISGRRFVGGSGIGGIKETQEMLDFCAEHNISSM 410
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN AMERL KG+V+YRFVI++ + +
Sbjct: 411 IENIPIDYVNTAMERLVKGDVKYRFVINVAESFS 512
>gb|CV036465.1|CV036465 RTNACL1_59_A05.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_59_A05_A029 5', mRNA sequence
Length = 788
Score = 107 bits (229), Expect = 5e-023
Identities = 42/94 (44%), Positives = 68/94 (72%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++++GLPE P+ ++++G + + GS +G I++TQEM+DF A+H +++
Sbjct: 374 LNLLKVNGKLVMVGLPENPVSFHPAAVISGRRFVGGSGIGGIKETQEMLDFCAEHNISSM 553
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN AMERL KG+V+YRFVI++ + +
Sbjct: 554 IENIPIDYVNTAMERLVKGDVKYRFVINVAESFS 655
>gb|CX652103.1|CX652103 COLD1_57_A03.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_57_A03_A029 3', mRNA sequence
Length = 672
Score = 107 bits (229), Expect = 5e-023
Identities = 42/94 (44%), Positives = 68/94 (72%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++++GLPE P+ ++++G + + GS +G I++TQEM+DF A+H +++
Sbjct: 120 LNLLKVNGKLVMVGLPENPVSFHPAAVISGRRFVGGSGIGGIKETQEMLDFCAEHNISSM 299
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN AMERL KG+V+YRFVI++ + +
Sbjct: 300 IENIPIDYVNTAMERLVKGDVKYRFVINVAESFS 401
>gb|CX652175.1|CX652175 COLD1_57_A03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_57_A03_A029 5', mRNA sequence
Length = 644
Score = 107 bits (229), Expect = 5e-023
Identities = 42/94 (44%), Positives = 68/94 (72%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++++GLPE P+ ++++G + + GS +G I++TQEM+DF A+H +++
Sbjct: 114 LNLLKVNGKLVMVGLPENPVSFHPAAVISGRRFVGGSGIGGIKETQEMLDFCAEHNISSM 293
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN AMERL KG+V+YRFVI++ + +
Sbjct: 294 IENIPIDYVNTAMERLVKGDVKYRFVINVAESFS 395
>gb|DR015524.1|DR015524 STRS1_4_B11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_4_B11_A034 3', mRNA sequence
Length = 780
Score = 107 bits (229), Expect = 5e-023
Identities = 42/94 (44%), Positives = 68/94 (72%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++++GLPE P+ ++++G + + GS +G I++TQEM+DF A+H +++
Sbjct: 292 LNLLKVNGKLVMVGLPENPVSFHPAAVISGRRFVGGSGIGGIKETQEMLDFCAEHNISSM 471
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN AMERL KG+V+YRFVI++ + +
Sbjct: 472 IENIPIDYVNTAMERLVKGDVKYRFVINVAESFS 573
>gb|DR169140.1|DR169140 RTPHOS1_30_G10.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_30_G10_A029 3', mRNA sequence
Length = 790
Score = 107 bits (229), Expect = 5e-023
Identities = 42/94 (44%), Positives = 68/94 (72%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
L LLK GK++++GLPE P+ ++++G + + GS +G I++TQEM+DF A+H +++
Sbjct: 279 LNLLKVNGKLVMVGLPENPVSFHPAAVISGRRFVGGSGIGGIKETQEMLDFCAEHNISSM 458
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLN 222
IE I + VN AMERL KG+V+YRFVI++ + +
Sbjct: 459 IENIPIDYVNTAMERLVKGDVKYRFVINVAESFS 560
>gb|CF473352.1|CF473352 RTWW2_2_B10.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_2_B10_A021 3', mRNA sequence
Length = 631
Score = 106 bits (227), Expect = 9e-023
Identities = 42/93 (45%), Positives = 67/93 (72%)
Frame = -2 / +3
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
YLALLK GK+++LG+ +PL L+ G +++AGS +GS+ +TQE +DF A+ +++
Sbjct: 108 YLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSS 287
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE++G + +N AMERL K +VRYRFV+D+ +
Sbjct: 288 MIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 386
>gb|CF664091.1|CF664091 RTCNT1_7_F10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_7_F10_A029 3', mRNA sequence
Length = 766
Score = 106 bits (227), Expect = 9e-023
Identities = 42/93 (45%), Positives = 67/93 (72%)
Frame = -2 / +2
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
YLALLK GK+++LG+ +PL L+ G +++AGS +GS+ +TQE +DF A+ +++
Sbjct: 182 YLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSS 361
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE++G + +N AMERL K +VRYRFV+D+ +
Sbjct: 362 MIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 460
>gb|CO170743.1|CO170743 NDL1_16_C08.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_16_C08_A029 5', mRNA sequence
Length = 755
Score = 106 bits (227), Expect = 9e-023
Identities = 42/93 (45%), Positives = 67/93 (72%)
Frame = -2 / -1
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
YLALLK GK+++LG+ +PL L+ G +++AGS +GS+ +TQE +DF A+ +++
Sbjct: 488 YLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSS 309
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE++G + +N AMERL K +VRYRFV+D+ +
Sbjct: 308 MIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 210
>gb|CO363561.1|CO363561 RTK1_10_B03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_10_B03_A029 5', mRNA sequence
Length = 806
Score = 106 bits (227), Expect = 9e-023
Identities = 42/93 (45%), Positives = 67/93 (72%)
Frame = -2 / -1
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
YLALLK GK+++LG+ +PL L+ G +++AGS +GS+ +TQE +DF A+ +++
Sbjct: 497 YLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSS 318
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE++G + +N AMERL K +VRYRFV+D+ +
Sbjct: 317 MIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 219
>gb|CO370352.1|CO370352 RTK1_67_G06.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_67_G06_A029 3', mRNA sequence
Length = 711
Score = 106 bits (227), Expect = 9e-023
Identities = 42/93 (45%), Positives = 67/93 (72%)
Frame = -2 / +3
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
YLALLK GK+++LG+ +PL L+ G +++AGS +GS+ +TQE +DF A+ +++
Sbjct: 183 YLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSS 362
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE++G + +N AMERL K +VRYRFV+D+ +
Sbjct: 363 MIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 461
>gb|CX650044.1|CX650044 COLD1_43_E01.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_43_E01_A029 3', mRNA sequence
Length = 845
Score = 106 bits (227), Expect = 9e-023
Identities = 42/93 (45%), Positives = 67/93 (72%)
Frame = -2 / +2
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
YLALLK GK+++LG+ +PL L+ G +++AGS +GS+ +TQE +DF A+ +++
Sbjct: 317 YLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSS 496
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE++G + +N AMERL K +VRYRFV+D+ +
Sbjct: 497 MIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 595
>gb|CX650124.1|CX650124 COLD1_43_E01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_43_E01_A029 5', mRNA sequence
Length = 861
Score = 106 bits (227), Expect = 9e-023
Identities = 42/93 (45%), Positives = 67/93 (72%)
Frame = -2 / +2
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
YLALLK GK+++LG+ +PL L+ G +++AGS +GS+ +TQE +DF A+ +++
Sbjct: 533 YLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSS 712
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE++G + +N AMERL K +VRYRFV+D+ +
Sbjct: 713 MIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 811
>gb|CX651460.1|CX651460 COLD1_52_C03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_52_C03_A029 5', mRNA sequence
Length = 635
Score = 106 bits (227), Expect = 9e-023
Identities = 42/93 (45%), Positives = 67/93 (72%)
Frame = -2 / -3
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
YLALLK GK+++LG+ +PL L+ G +++AGS +GS+ +TQE +DF A+ +++
Sbjct: 528 YLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSS 349
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE++G + +N AMERL K +VRYRFV+D+ +
Sbjct: 348 MIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 250
>gb|DR025430.1|DR025430 STRS1_71_C07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_71_C07_A034 5', mRNA sequence
Length = 720
Score = 106 bits (227), Expect = 9e-023
Identities = 42/93 (45%), Positives = 67/93 (72%)
Frame = -2 / -1
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
YLALLK GK+++LG+ +PL L+ G +++AGS +GS+ +TQE +DF A+ +++
Sbjct: 507 YLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSS 328
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE++G + +N AMERL K +VRYRFV+D+ +
Sbjct: 327 MIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 229
>gb|DR070252.1|DR070252 RTDK1_12_E08.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_12_E08_A029 3', mRNA sequence
Length = 645
Score = 106 bits (227), Expect = 9e-023
Identities = 42/93 (45%), Positives = 67/93 (72%)
Frame = -2 / +2
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
YLALLK GK+++LG+ +PL L+ G +++AGS +GS+ +TQE +DF A+ +++
Sbjct: 89 YLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSS 268
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE++G + +N AMERL K +VRYRFV+D+ +
Sbjct: 269 MIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 367
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 253,447,866
Number of Sequences: 355925
Number of extensions: 3112141
Number of successful extensions: 51697
Number of sequences better than 1.0e-020: 87
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 6838469820
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)