TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3198766.2.1
(1273 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO201745.1|CO201745 RTCNT2_7_G09.g1_A029 Root control 2 ... 280 e-108
gb|DR161157.1|DR161157 RTFE1_10_E01.b1_A029 Roots minus iro... 303 e-102
gb|DR071311.1|DR071311 RTDK1_19_C02.b1_A029 Roots, dark Pin... 257 1e-098
gb|DR120859.1|DR120859 RTMG1_32_A06.g1_A029 Roots minus mag... 275 9e-095
gb|DR746198.1|DR746198 RTCU1_35_H02.b1_A029 Roots plus adde... 256 6e-094
gb|CO362033.1|CO362033 NDL2_8_E07.g1_A029 Needles control 2... 303 9e-094
gb|CF400305.1|CF400305 RTWW1_4_F08.g1_A015 Well-watered lob... 308 3e-091
gb|CF401342.1|CF401342 RTWW1_11_C09.g1_A015 Well-watered lo... 329 2e-089
gb|CO171062.1|CO171062 NDL1_18_F08.g1_A029 Needles control ... 329 2e-089
gb|CO200608.1|CO200608 GEO2_8_A10.g1_A032 Root gravitropism... 329 2e-089
gb|DR117422.1|DR117422 RTMG1_6_H01.g1_A029 Roots minus magn... 314 8e-089
gb|CF478684.1|CF478684 RTWW3_16_H09.g1_A022 Well-watered lo... 326 2e-088
gb|CF671517.1|CF671517 RTCNT1_57_D05.g1_A029 Root control P... 325 3e-088
gb|DR117495.1|DR117495 RTMG1_7_G09.b1_A029 Roots minus magn... 325 3e-088
gb|CF401295.1|CF401295 RTWW1_11_C07.g1_A015 Well-watered lo... 314 4e-088
gb|CF402753.1|CF402753 RTWW1_22_G07.g1_A015 Well-watered lo... 325 4e-088
gb|BM133679.1|BM133679 NXLV_010_G02_F NXLV (Nsf Xylem Late ... 324 8e-088
gb|CF401713.1|CF401713 RTWW1_14_C04.g1_A015 Well-watered lo... 311 1e-087
gb|CF390665.1|CF390665 RTDR2_20_H04.g1_A021 Loblolly pine r... 292 5e-087
gb|DR168990.1|DR168990 RTPHOS1_29_E12.b1_A029 Roots minus p... 321 7e-087
gb|CF402186.1|CF402186 RTWW1_20_F02.g1_A015 Well-watered lo... 320 1e-086
gb|DR097479.1|DR097479 STRR1_34_H05.g3_A033 Stem Response R... 315 3e-085
gb|DR097773.1|DR097773 STRR1_36_H05.g3_A033 Stem Response R... 311 8e-084
gb|BX255698.1|BX255698 BX255698 Pinus pinaster differenciat... 308 5e-083
gb|CF478224.1|CF478224 RTWW3_19_G08.g1_A022 Well-watered lo... 304 7e-082
gb|CF389614.1|CF389614 RTDR2_8_D07.g1_A021 Loblolly pine ro... 270 6e-080
gb|AL751061.1|AL751061 AL751061 RS Pinus pinaster cDNA clon... 296 3e-079
gb|CF399982.1|CF399982 RTWW1_2_B02.g1_A015 Well-watered lob... 237 2e-076
gb|DR069223.1|DR069223 RTDK1_5_E09.g1_A029 Roots, dark Pinu... 284 1e-075
gb|CF474563.1|CF474563 RTWW2_9_G09.g1_A021 Well-watered lob... 158 1e-075
gb|CF400336.1|CF400336 RTWW1_4_C07.g1_A015 Well-watered lob... 280 1e-074
gb|CV033562.1|CV033562 RTNACL1_35_F12.b1_A029 Roots plus ad... 280 2e-074
gb|CF669425.1|CF669425 RTCNT1_43_G02.b1_A029 Root control P... 210 1e-073
gb|DR161241.1|DR161241 RTFE1_10_E01.g1_A029 Roots minus iro... 275 3e-073
gb|CF665374.1|CF665374 RTCNT1_15_D05.g1_A029 Root control P... 241 8e-072
gb|CF670977.1|CF670977 RTCNT1_53_H01.g1_A029 Root control P... 270 1e-071
gb|CR354745.1|CR354745 CR354745 Pinus pinaster differenciat... 268 5e-071
gb|BQ696543.1|BQ696543 NXPV_042_E02_F NXPV (Nsf Xylem Plani... 235 7e-071
gb|CV033540.1|CV033540 RTNACL1_35_D11.b1_A029 Roots plus ad... 267 1e-070
gb|DR017596.1|DR017596 STRS1_17_G04.b1_A034 Shoot tip pitch... 265 5e-070
gb|CV033650.1|CV033650 RTNACL1_35_F12.g1_A029 Roots plus ad... 260 1e-068
gb|DR100690.1|DR100690 STRR1_66_H02.g1_A033 Stem Response R... 258 8e-068
gb|DR048046.1|DR048046 RTBOR1_6_F07.b2_A029 Roots plus adde... 158 3e-067
gb|CF401168.1|CF401168 RTWW1_10_B05.g1_A015 Well-watered lo... 142 1e-066
gb|BG040297.1|BG040297 NXSI_110_G02_F NXSI (Nsf Xylem Side ... 251 7e-066
gb|CO199504.1|CO199504 GEO2_1_E01.g1_A032 Root gravitropism... 248 8e-065
gb|DR023301.1|DR023301 STRS1_56_E08.g1_A034 Shoot tip pitch... 247 2e-064
gb|BQ633895.1|BQ633895 NXRV062_B09_F NXRV (Nsf Xylem Root w... 140 2e-064
gb|BQ699768.1|BQ699768 NXRV128_F12_F NXRV (Nsf Xylem Root w... 159 6e-064
gb|BM367381.1|BM367381 NXLV_048_E03_F NXLV (Nsf Xylem Late ... 243 3e-063
gb|CO361957.1|CO361957 NDL2_8_E07.b1_A029 Needles control 2... 243 3e-063
gb|CX713137.1|CX713137 RTPQ1_7_F01.b1_A032 Roots treated wi... 243 3e-063
gb|CF400248.1|CF400248 RTWW1_4_C07.b1_A015 Well-watered lob... 158 6e-063
gb|DR019720.1|DR019720 STRS1_32_A09.b1_A034 Shoot tip pitch... 219 9e-063
gb|CF400507.1|CF400507 RTWW1_5_D03.g1_A015 Well-watered lob... 239 3e-062
gb|BF049728.1|BF049728 NXCI_106_D04_F NXCI (Nsf Xylem Compr... 238 5e-062
gb|BX250981.1|BX250981 BX250981 Pinus pinaster differenciat... 237 1e-061
gb|AL750621.1|AL750621 AL750621 RN Pinus pinaster cDNA clon... 236 2e-061
gb|DR097388.1|DR097388 STRR1_34_H05.b1_A033 Stem Response R... 236 2e-061
gb|BE761988.1|BE761988 NXCI_075_F07_F NXCI (Nsf Xylem Compr... 235 6e-061
gb|DR023486.1|DR023486 STRS1_58_B05.b1_A034 Shoot tip pitch... 235 6e-061
gb|AL751028.1|AL751028 AL751028 RS Pinus pinaster cDNA clon... 131 1e-060
gb|CF473597.1|CF473597 RTWW2_3_C02.g1_A021 Well-watered lob... 234 1e-060
gb|BG039718.1|BG039718 NXSI_103_C07_F NXSI (Nsf Xylem Side ... 129 3e-060
gb|CO366790.1|CO366790 RTK1_30_C11.b1_A029 Roots minus pota... 231 1e-059
gb|CX647323.1|CX647323 COLD1_15_G01.b1_A029 Root cold Pinus... 187 6e-059
gb|CO174502.1|CO174502 NDL1_44_A03.g1_A029 Needles control ... 224 9e-058
gb|CF665030.1|CF665030 RTCNT1_13_A07.g1_A029 Root control P... 222 3e-057
gb|BX254536.1|BX254536 BX254536 Pinus pinaster differenciat... 220 2e-056
gb|CO170986.1|CO170986 NDL1_18_F08.b1_A029 Needles control ... 218 8e-056
gb|CF401071.1|CF401071 RTWW1_9_G03.g1_A015 Well-watered lob... 217 1e-055
gb|DR386187.1|DR386187 RTHG1_13_B03.g1_A029 Roots plus adde... 215 7e-055
gb|CO369134.1|CO369134 RTK1_45_E02.b1_A029 Roots minus pota... 210 1e-053
gb|CF670903.1|CF670903 RTCNT1_53_H01.b1_A029 Root control P... 210 2e-053
gb|AW754904.1|AW754904 PC08B10 Pine TriplEx pollen cone lib... 207 1e-052
gb|DR745814.1|DR745814 RTCU1_32_E09.g1_A029 Roots plus adde... 206 2e-052
gb|CF474497.1|CF474497 RTWW2_9_G09.b1_A021 Well-watered lob... 188 3e-052
gb|DR177419.1|DR177419 RTMNUT1_5_F01.b1_A029 Roots minus mi... 205 6e-052
gb|DR683957.1|DR683957 EST1074033 Normalized pine embryo li... 95 2e-051
gb|BX680185.1|BX680185 BX680185 RS Pinus pinaster cDNA clon... 128 1e-050
gb|CO200240.1|CO200240 GEO2_6_F04.b1_A032 Root gravitropism... 200 1e-050
gb|DR695222.1|DR695222 EST1085315 Normalized pine embryo li... 161 7e-050
gb|BQ634030.1|BQ634030 NXRV063_H09_F NXRV (Nsf Xylem Root w... 161 2e-049
gb|CF472577.1|CF472577 RTDS1_10_A06.g1_A015 Drought-stresse... 159 4e-048
gb|DR097687.1|DR097687 STRR1_36_H05.b1_A033 Stem Response R... 185 5e-046
gb|BX250283.1|BX250283 BX250283 Pinus pinaster differenciat... 183 2e-045
gb|DR686230.1|DR686230 EST1076308 Normalized pine embryo li... 86 4e-045
gb|DT633426.1|DT633426 EST1148357 Normalized pine embryo li... 86 5e-045
gb|CF402095.1|CF402095 RTWW1_20_F02.b1_A015 Well-watered lo... 182 6e-045
gb|BE662271.1|BE662271 ST84/ST84A04 Pine TriplEx shoot tip ... 178 6e-044
gb|CF401104.1|CF401104 RTWW1_10_B05.b1_A015 Well-watered lo... 105 1e-043
gb|CO201671.1|CO201671 RTCNT2_7_G09.b1_A029 Root control 2 ... 176 4e-043
gb|DR023359.1|DR023359 STRS1_57_C07.b1_A034 Shoot tip pitch... 78 4e-043
gb|CF401635.1|CF401635 RTWW1_14_C04.b1_A015 Well-watered lo... 174 1e-042
gb|DT631978.1|DT631978 EST1146909 Normalized pine embryo li... 89 3e-042
gb|DR742971.1|DR742971 RTCU1_8_E01.g2_A029 Roots plus added... 172 4e-042
gb|BQ198210.1|BQ198210 NXLV128_A12_F NXLV (Nsf Xylem Late w... 170 6e-042
gb|CF385204.1|CF385204 RTDR1_2_G08.g1_A015 Loblolly pine ro... 93 9e-042
gb|DR069148.1|DR069148 RTDK1_5_E09.b1_A029 Roots, dark Pinu... 78 1e-041
gb|CO200322.1|CO200322 GEO2_6_F04.g1_A032 Root gravitropism... 163 1e-041
gb|DR689988.1|DR689988 EST1080074 Normalized pine embryo li... 75 2e-041
gb|DT631856.1|DT631856 EST1146787 Normalized pine embryo li... 161 4e-041
gb|CF478008.1|CF478008 RTWW3_17_E11.g1_A022 Well-watered lo... 161 5e-041
gb|CX651681.1|CX651681 COLD1_54_C07.b1_A029 Root cold Pinus... 168 8e-041
gb|AW985282.1|AW985282 NXNV_135_D01_F Nsf Xylem Normal wood... 166 3e-040
gb|BQ700242.1|BQ700242 NXRV103_B01_F NXRV (Nsf Xylem Root w... 159 7e-040
gb|DR684038.1|DR684038 EST1074115 Normalized pine embryo li... 161 7e-039
gb|DR180886.1|DR180886 RTMNUT1_35_A12.g1_A029 Roots minus m... 161 1e-038
gb|BG040772.1|BG040772 NXSI_114_H07_F NXSI (Nsf Xylem Side ... 159 5e-038
gb|DR090800.1|DR090800 RTAL1_17_A07.g1_A029 Roots plus adde... 158 7e-038
gb|AW698214.1|AW698214 NXNV_070_A01_F Nsf Xylem Normal wood... 157 1e-037
gb|CD027822.1|CD027822 NXNV_070_A01 Nsf Xylem Normal wood V... 157 1e-037
gb|CF478056.1|CF478056 RTWW3_17_A02.g1_A022 Well-watered lo... 78 9e-037
gb|DR117585.1|DR117585 RTMG1_7_G09.g1_A029 Roots minus magn... 154 1e-036
gb|BE241357.1|BE241357 NXNV_186_H07_F Nsf Xylem Normal wood... 152 4e-036
gb|BE810207.1|BE810207 NXCI_061_D08_F NXCI (Nsf Xylem Compr... 92 6e-036
gb|BX253884.1|BX253884 BX253884 Pinus pinaster differenciat... 150 1e-035
gb|AW064989.1|AW064989 ST38C07 Pine TriplEx shoot tip libra... 123 3e-035
gb|BX254296.1|BX254296 BX254296 Pinus pinaster differenciat... 149 4e-035
gb|AW698213.1|AW698213 NXNV_070_A02_F Nsf Xylem Normal wood... 148 1e-034
gb|CD027823.1|CD027823 NXNV_070_A02 Nsf Xylem Normal wood V... 148 1e-034
gb|BX250216.1|BX250216 BX250216 Pinus pinaster differenciat... 147 2e-034
gb|BF220841.1|BF220841 NXCI_154_E09_F NXCI (Nsf Xylem Compr... 146 3e-034
gb|BQ634633.1|BQ634633 NXRV071_D02_F NXRV (Nsf Xylem Root w... 146 4e-034
gb|BQ291291.1|BQ291291 NXRV058_D01_F NXRV (Nsf Xylem Root w... 105 5e-034
gb|AW065014.1|AW065014 ST38F01 Pine TriplEx shoot tip libra... 144 9e-034
gb|DR060099.1|DR060099 RTNIT1_25_E07.g1_A029 Roots minus ni... 144 1e-033
gb|BM492945.1|BM492945 NXRV_032_E05_F NXRV (Nsf Xylem Root ... 144 2e-033
gb|BE758614.1|BE758614 NXCI_069_B03_F NXCI (Nsf Xylem Compr... 90 2e-033
gb|DR745375.1|DR745375 RTCU1_28_H07.g1_A029 Roots plus adde... 140 2e-032
gb|BX680745.1|BX680745 BX680745 RS Pinus pinaster cDNA clon... 139 4e-032
gb|CF477967.1|CF477967 RTWW3_17_E11.b1_A022 Well-watered lo... 138 6e-032
gb|BM158766.1|BM158766 NXLV_038_B05_F NXLV (Nsf Xylem Late ... 138 1e-031
gb|AW226228.1|AW226228 ST79H03 Pine TriplEx shoot tip libra... 86 1e-029
gb|BQ697346.1|BQ697346 NXPV_053_A10_F NXPV (Nsf Xylem Plani... 97 2e-029
gb|DR180809.1|DR180809 RTMNUT1_35_A12.b1_A029 Roots minus m... 126 3e-028
gb|BE582301.1|BE582301 NXCI_031_G04_F NXCI (Nsf Xylem Compr... 89 5e-028
gb|DR078591.1|DR078591 RTFEPL1_5_E02.g1_A029 Roots plus add... 125 6e-028
gb|CF389343.1|CF389343 RTDR2_7_H11.b1_A021 Loblolly pine ro... 122 4e-027
gb|CF389587.1|CF389587 RTDR2_8_D07.b1_A021 Loblolly pine ro... 120 2e-026
gb|AW698057.1|AW698057 NXNV_078_C05_F Nsf Xylem Normal wood... 118 7e-026
gb|DR023697.1|DR023697 STRS1_59_A03.g1_A034 Shoot tip pitch... 91 1e-025
gb|BF221021.1|BF221021 NXCI_162_B02_F NXCI (Nsf Xylem Compr... 115 6e-025
gb|DR177509.1|DR177509 RTMNUT1_5_F01.g1_A029 Roots minus mi... 111 8e-024
gb|CO200002.1|CO200002 GEO2_4_G10.g1_A032 Root gravitropism... 109 4e-023
gb|CD027993.1|CD027993 NXNV_144_B09_F Nsf Xylem Normal wood... 108 7e-023
gb|CX713220.1|CX713220 RTPQ1_7_F01.g1_A032 Roots treated wi... 108 1e-022
gb|BF169643.1|BF169643 NXCI_125_F11_F NXCI (Nsf Xylem Compr... 107 2e-022
gb|BX255271.1|BX255271 BX255271 Pinus pinaster differenciat... 68 9e-022
gb|BQ701060.1|BQ701060 NXRV115_A06_F NXRV (Nsf Xylem Root w... 103 3e-021
gb|CF385211.1|CF385211 RTDR1_2_C04.g1_A015 Loblolly pine ro... 103 3e-021
gb|CX651754.1|CX651754 COLD1_54_C07.g1_A029 Root cold Pinus... 73 6e-021
gb|BQ197748.1|BQ197748 NXLV115_E01_F NXLV (Nsf Xylem Late w... 102 6e-021
>gb|CO201745.1|CO201745 RTCNT2_7_G09.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_7_G09_A029 5', mRNA sequence
Length = 837
Score = 280 bits (605), Expect(2) = e-108
Identities = 105/161 (65%), Positives = 130/161 (80%)
Frame = +2 / +2
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT+SDGDG+++FG++N+W+DH SLS+C DGLID I ST +TISN +T+
Sbjct: 350 VRDSPTHYGWRTISDGDGVSIFGASNIWVDHCSLSSCTDGLIDAIRGSTAITISNNFMTH 529
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML +D + +D MQ+TVAFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 530 HDKVMLLGHNDDYTQDVNMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 709
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVW 919
GS PTI SQGNR++AP ++K+VTK+ T ESVWK W W
Sbjct: 710 GSANPTINSQGNRFLAPDYHSSKEVTKREYTAESVWKQWNW 832
Score = 162 bits (348), Expect(2) = 2e-049
Identities = 83/157 (52%), Positives = 95/157 (60%)
Frame = -2 / -1
Query: 906 FHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYMSQCV*SLLTTWKKPQRHL 727
FHT S V VT GA RLPWL++VG LPPMAY+SQ V*SL TT K P RHL
Sbjct: 819 FHTLSAVYSRFVTSLEE**SGARNRLPWLLIVGFALPPMAYISQWV*SLFTT*K*PCRHL 640
Query: 726 GILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLVRWQLEMVTPVDLAMTSMRPSW 547
G+ CT P PKWLKATV CM+ S SL S+T W V E+V VD M SM PS
Sbjct: 639 GMRCTSPSPKWLKATVTCMLTSWV*SSLWPNSITLSWWVIKLFEIVIAVDPLMASMSPSV 460
Query: 546 QLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
QL++E+WS+ L+ PK PSPS V P GES T
Sbjct: 459 QLDKEQWSTQILLAPKMETPSPSLIVLHP*CVGESLT 349
Score = 133 bits (284), Expect(2) = e-108
Identities = 57/95 (60%), Positives = 64/95 (67%)
Frame = +2 / +2
Query: 83 RKRLARCAKGFGRNTTGGLAGKFYXXXXXXXXXXXNPRPGTLRWGVIQIEPLWITFAKTM 262
RKRLA CA GFGRN GG G+FY NPRPGTLR VIQ EPLWITF + M
Sbjct: 2 RKRLADCAIGFGRNAIGGQNGRFYVVTDPNDYDAVNPRPGTLRHAVIQTEPLWITFERDM 181
Query: 263 IITLKEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
+I LKEELI+ KTIDGRGV V I NG +T+Q+
Sbjct: 182 VIQLKEELIMNSYKTIDGRGVNVHIANGPCITVQY 286
Score = 57.9 bits (120), Expect(2) = 2e-049
Identities = 27/57 (47%), Positives = 32/57 (56%)
Frame = -2 / -1
Query: 252 AKVIHSGSIWMTPHRSVPGRGFXXXXXXXXXXX*NLPASPPVVLRPNPLAHRARRFR 82
+KVIH GS+ +T RSVPGRG *NLP PP+ PNP+A A FR
Sbjct: 171 SKVIHRGSV*ITAWRSVPGRGLTAS*SLGSVTT*NLPF*PPMAFLPNPMAQSASLFR 1
>gb|DR161157.1|DR161157 RTFE1_10_E01.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_10_E01_A029 3', mRNA sequence
Length = 799
Score = 303 bits (656), Expect(2) = e-102
Identities = 112/178 (62%), Positives = 139/178 (78%)
Frame = +2 / -1
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG+ N+W+DH SLS+C DGLID I ST +TISN +++
Sbjct: 541 VRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQ 362
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD + +D MQ+T+AFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 361 HDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 182
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTG 970
GS PTI SQGNR++AP N +K+VTK D PE+ W+ W W SE DL + GA+FT +G
Sbjct: 181 GSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNGAFFTQSG 8
Score = 126 bits (270), Expect(3) = 2e-048
Identities = 62/112 (55%), Positives = 71/112 (63%)
Frame = -2 / +3
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S CLVT L GA RLPWL++VG LPP+AY+
Sbjct: 18 VKNAPFNIRSPSDLQFHCLHAFSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYI 197
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMT 625
SQ V*SL TTWK P RHLG+ CT P PKWLKA V CM+ S SL +S+T
Sbjct: 198 SQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLTS*V*SSLWPRSIT 353
Score = 91.8 bits (194), Expect(2) = e-102
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = +2 / -1
Query: 188 NPRPGTLRWGVIQIEPLWITFAKTMIITLKEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
NPRPGTLR VIQ EPLWI F + M+I LKEELI+ KTIDGRG V I NG +T+Q+
Sbjct: 784 NPRPGTLRHAVIQNEPLWIIFERDMVIQLKEELIMNSYKTIDGRGANVHIANGPCITVQY 605
Score = 59.7 bits (124), Expect(3) = 2e-048
Identities = 29/55 (52%), Positives = 33/55 (60%)
Frame = -2 / +3
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
LEMV VD M SM PS QL++E+WS+ L PK PSPS V P GES T
Sbjct: 378 LEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPSPSLLVLHP*CVGESLT 542
Score = 46.0 bits (94), Expect(3) = 2e-048
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = -1 / +2
Query: 349 RAVGDAHLHAAAVNGLVAADDELLLKRDDHGLGEGDPQRLDLDDA 215
R VGD + A+AV+ LV D+LL + DDH + DPQRL L+++
Sbjct: 623 RTVGDVDIGASAVDCLVTVHDKLLFELDDHVSLKDDPQRLVLNNS 757
>gb|DR071311.1|DR071311 RTDK1_19_C02.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_C02_A029 3', mRNA sequence
Length = 793
Score = 257 bits (555), Expect(2) = 1e-098
Identities = 97/147 (65%), Positives = 119/147 (80%)
Frame = +2 / -2
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG+ N+W+DH SLS+C DGLID I ST +TISN +++
Sbjct: 444 VRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQ 265
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD + +D MQ+T+AFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 264 HDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 85
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTK 877
GS PTI SQGNR++AP N +K+VTK
Sbjct: 84 GSANPTINSQGNRFLAPSNAFSKEVTK 4
Score = 124 bits (266), Expect(2) = 1e-098
Identities = 54/95 (56%), Positives = 62/95 (65%)
Frame = +2 / -2
Query: 83 RKRLARCAKGFGRNTTGGLAGKFYXXXXXXXXXXXNPRPGTLRWGVIQIEPLWITFAKTM 262
R+RLA CA GFGRN GG G+FY NPRPGTLR VIQ EPLWI F + M
Sbjct: 792 RQRLADCAIGFGRNAIGGQNGRFYVVTDPNDDNPVNPRPGTLRHAVIQNEPLWIIFERDM 613
Query: 263 IITLKEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
+I LKEELI+ KTIDGRG V I NG +T+Q+
Sbjct: 612 VIQLKEELIMNSYKTIDGRGANVHIANGPCITVQY 508
Score = 111 bits (237), Expect(3) = 5e-044
Identities = 51/85 (60%), Positives = 59/85 (69%)
Frame = -2 / +2
Query: 879 CLVTCFAARLGGAM*RLPWLMMVGALLPPMAYMSQCV*SLLTTWKKPQRHLGILCTRPLP 700
CLVT L GA RLPWL++VG LPP+AY+SQ V*SL TTWK P RHLG+ CT P P
Sbjct: 2 CLVTSLENALLGARNRLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMRCTSPSP 181
Query: 699 KWLKATVICMIWSSGCLSLELKSMT 625
KWLKA V CM+ S SL +S+T
Sbjct: 182 KWLKAIVTCMLTS*V*SSLWPRSIT 256
Score = 59.7 bits (124), Expect(3) = 5e-044
Identities = 29/55 (52%), Positives = 33/55 (60%)
Frame = -2 / +2
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
LEMV VD M SM PS QL++E+WS+ L PK PSPS V P GES T
Sbjct: 281 LEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPSPSLLVLHP*CVGESLT 445
Score = 51.5 bits (106), Expect(3) = 5e-044
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = -2 / +2
Query: 252 AKVIHSGSIWMTPHRSVPGRGFXXXXXXXXXXX*NLPASPPVVLRPNPLAHRA 94
+K+IH GS +T R VPGRG *NLP PP+ PNP+A A
Sbjct: 623 SKMIHRGSF*ITAWRRVPGRGLTGLSSLGSVTT*NLPFCPPMAFLPNPMAQSA 781
>gb|DR120859.1|DR120859 RTMG1_32_A06.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_32_A06_A029 5', mRNA sequence
Length = 815
Score = 275 bits (594), Expect(2) = 9e-095
Identities = 105/173 (60%), Positives = 128/173 (73%)
Frame = +2 / +1
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VR SP+H+GWRTVSDGDGI++FG +W+DH SLSNC+DGLID I ST +TISN + ++
Sbjct: 295 VRASPEHYGWRTVSDGDGISIFGGRYIWIDHCSLSNCKDGLIDAIMGSTAITISNNYFSH 474
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML +D + D IMQIT+AFN+FG GL+QRMPRCR G+FHVVNN Y HW MYAIG
Sbjct: 475 HDMVMLLGHADSYTNDAIMQITIAFNYFGEGLIQRMPRCRHGYFHVVNNQYAHWEMYAIG 654
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAY 955
GS PTI S+GN +IAP N AK+VTK+ D W W W S DL + GAY
Sbjct: 655 GSAKPTINSEGNIFIAPDNANAKEVTKRLDVVGEEWTQWNWRSAGDLMLNGAY 813
Score = 152 bits (327), Expect(2) = 8e-039
Identities = 86/174 (49%), Positives = 101/174 (58%)
Frame = -2 / -1
Query: 957 K*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYMS 778
K*AP RS ++ H+ S LVT A L GAM LP L+MVG LPP+AY+S
Sbjct: 815 K*APLSIRSPADLQFHCVHSSPTTSSLLVTSLALALSGAMNMLPSLLMVGLALPPIAYIS 636
Query: 777 QCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLVRWQL 598
QC L TT K P HLGIL P PK LKA VIC+I S LS +SMT W +
Sbjct: 635 QCAYWLFTT*KYPCLHLGIL*MSPSPK*LKAMVICIIASFV*LSACPRSMTMSWCEK*LF 456
Query: 597 EMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
EMV VD + S+RPS QLERE+ S PK +PSPS+TV QP SGE+ T
Sbjct: 455 EMVMAVDPMIASIRPSLQLEREQ*SIQI*RPPKIEIPSPSDTVLQP*CSGEALT 294
Score = 93.6 bits (198), Expect(2) = 9e-095
Identities = 38/75 (50%), Positives = 48/75 (64%)
Frame = +2 / +1
Query: 143 GKFYXXXXXXXXXXXNPRPGTLRWGVIQIEPLWITFAKTMIITLKEELIIRGDKTIDGRG 322
G++Y NP+PGTLR VIQ EPLWI F M+I LKEEL++ KTIDGRG
Sbjct: 7 GQYYVVTDSSDEDAVNPKPGTLRHAVIQDEPLWIIFQSDMVIRLKEELLMNSFKTIDGRG 186
Query: 323 VQVRITNGAQLTLQF 367
V I +GA +T+Q+
Sbjct: 187 ADVHIAHGACITIQY 231
Score = 29.0 bits (57), Expect(2) = 8e-039
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -1 / -3
Query: 358 RELRAVGDAHLHAAAVNGLVAADDELLLKRDDHGLGEGDPQRLDLDDAPPE 206
R AVG+ ++ A+A++ L +E + +DH + +P RL L++ E
Sbjct: 222 RNAGAVGNVNVGASAIDCLETVHEEFFFEPNDHVALKYNP*RLVLNNGVAE 70
>gb|DR746198.1|DR746198 RTCU1_35_H02.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_35_H02_A029 3', mRNA sequence
Length = 753
Score = 256 bits (553), Expect(2) = 6e-094
Identities = 96/143 (67%), Positives = 117/143 (81%)
Frame = +2 / -1
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT+SDGDGI++FG ++VW+DH+SLSNC DGLID I STG+TISN H T+
Sbjct: 429 VRDSPTHYGWRTISDGDGISIFGGSDVWVDHVSLSNCADGLIDAIMGSTGITISNSHFTH 250
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ +L +SD + D M++T+A+NHFG+GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 249 HDKAILLGASDSYTPDVKMRVTIAYNHFGKGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 70
Query: 797 GSKAPTIISQGNRYIAPPNLAAK 865
GS PTI SQGNR+ AP N AK
Sbjct: 69 GSANPTINSQGNRFSAPDNALAK 1
Score = 165 bits (355), Expect(2) = 9e-047
Identities = 78/143 (54%), Positives = 92/143 (64%)
Frame = -2 / +2
Query: 864 FAARLGGAM*RLPWLMMVGALLPPMAYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKA 685
FA L GA P L++VG LPP+AY+SQ V*SL TTWK P HLGILCTRPLPKWL A
Sbjct: 2 FAKALSGAENLFP*LLIVGFALPPIAYISQ*V*SLFTTWKYPCLHLGILCTRPLPKWLYA 181
Query: 684 TVICMIWSSGCLSLELKSMTSLWLVRWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVE 505
V ++ S LSL ++ W V+W EMV PVD M SMRPS QL+ + WS+HT +
Sbjct: 182 IVTRILTSGV*LSLAPNNIALSW*VKWLFEMVMPVDPMMASMRPSAQLDNDTWSTHTSLP 361
Query: 504 PKTVMPSPSETVRQPKWSGESRT 436
PK +PSPS V P GES T
Sbjct: 362 PKMEIPSPSLIVLHP*CVGESLT 430
Score = 109 bits (233), Expect(2) = 6e-094
Identities = 47/86 (54%), Positives = 55/86 (63%)
Frame = +2 / -1
Query: 110 GFGRNTTGGLAGKFYXXXXXXXXXXXNPRPGTLRWGVIQIEPLWITFAKTMIITLKEELI 289
GFGR+ GG G+ Y NPRPGTLR VIQ EPLWI F + M+I LKEELI
Sbjct: 750 GFGRDALGGKHGRLYMVTDPNDYDAVNPRPGTLRHAVIQSEPLWIIFQRDMVIQLKEELI 571
Query: 290 IRGDKTIDGRGVQVRITNGAQLTLQF 367
+ KTIDGRGV V I NG +T+Q+
Sbjct: 570 MNSYKTIDGRGVNVHIGNGPCITVQY 493
Score = 46.0 bits (94), Expect(2) = 9e-047
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = -2 / +2
Query: 249 KVIHSGSIWMTPHRSVPGRGFXXXXXXXXXXX*NLPASPPVVLRPNP 109
K+IH GS+ MT R VPG GF NLP PP PNP
Sbjct: 611 KMIHRGSL*MTA*RRVPGLGFTAS*SLGSVTIYNLPCLPPRASLPNP 751
>gb|CO362033.1|CO362033 NDL2_8_E07.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_E07_A029 5', mRNA sequence
Length = 753
Score = 303 bits (656), Expect(2) = 9e-094
Identities = 112/178 (62%), Positives = 139/178 (78%)
Frame = +2 / +3
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG+ N+W+DH SLS+C DGLID I ST +TISN +++
Sbjct: 198 VRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQ 377
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD + +D MQ+T+AFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 378 HDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 557
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTG 970
GS PTI SQGNR++AP N +K+VTK D PE+ W+ W W SE DL + GA+FT +G
Sbjct: 558 GSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNGAFFTQSG 731
Score = 126 bits (270), Expect(3) = 1e-046
Identities = 62/112 (55%), Positives = 71/112 (63%)
Frame = -2 / -3
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S CLVT L GA RLPWL++VG LPP+AY+
Sbjct: 721 VKNAPFNIRSPSDLQFHCLHAFSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYI 542
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMT 625
SQ V*SL TTWK P RHLG+ CT P PKWLKA V CM+ S SL +S+T
Sbjct: 541 SQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLTS*V*SSLWPRSIT 386
Score = 62.0 bits (129), Expect(2) = 9e-094
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = +2 / +3
Query: 236 LWITFAKTMIITLKEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
LWI F + M+I LKEELI+ KTIDGRG V I NG +T+Q+
Sbjct: 3 LWIIFERDMVIQLKEELIMNSYKTIDGRGANVHIANGPCITVQY 134
Score = 59.7 bits (124), Expect(3) = 1e-046
Identities = 29/55 (52%), Positives = 33/55 (60%)
Frame = -2 / -3
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
LEMV VD M SM PS QL++E+WS+ L PK PSPS V P GES T
Sbjct: 361 LEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPSPSLLVLHP*CVGESLT 197
Score = 40.0 bits (81), Expect(3) = 1e-046
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -1 / -2
Query: 349 RAVGDAHLHAAAVNGLVAADDELLLKRDDHGLGEGDPQ 236
R VGD + A+AV+ LV D+LL + DDH + DPQ
Sbjct: 116 RTVGDVDIGASAVDCLVTVHDKLLFELDDHVSLKDDPQ 3
>gb|CF400305.1|CF400305 RTWW1_4_F08.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_4_F08_A015 5', mRNA sequence
Length = 763
Score = 308 bits (668), Expect(2) = 3e-091
Identities = 118/202 (58%), Positives = 148/202 (73%)
Frame = +2 / +2
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG +N+W+DH SLSNC DGLID I ST +TISN +T+
Sbjct: 158 VRDSPGHYGWRTRSDGDGVSIFGGSNIWVDHCSLSNCADGLIDAILGSTAITISNNFMTH 337
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD++ +D MQ+TVAFNHFG GLVQR+PRCR G+FHVVNNDYTHW MYAIG
Sbjct: 338 HDKVMLLGHSDEYVQDVNMQVTVAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIG 517
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR++AP N +K+VTK D PES W+ W W S+ DL + GA+FT +G
Sbjct: 518 GSANPTINSQGNRFLAPVNRFSKEVTKHEDAPESAWRQWNWRSDGDLMLNGAFFTQSGAA 697
Query: 977 INRQFNKKDLIKPRNGSYVTRL 1042
+ + K + + S V L
Sbjct: 698 ASSSYAKASSLAAKPSSLVGSL 763
Score = 184 bits (397), Expect(2) = 4e-049
Identities = 91/175 (52%), Positives = 106/175 (60%)
Frame = -2 / -2
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S C VT RL GA RLPWL++VG LPP+AY+
Sbjct: 681 VKNAPFNIRSPSDLQFHCRHALSGASSCFVTSLEKRLTGARNRLPWLLIVGLALPPIAYI 502
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLVRWQ 601
SQCV*SL TTWK P RHLG+ CT P PKWLKATV CM+ S SL +SMT W V
Sbjct: 501 SQCV*SLFTTWK*PCRHLGMRCTSPSPKWLKATVTCMLTSCTYSSLWPRSMTLSWCVIKL 322
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
E+V VD + SM PS Q ++E+ S+ L+ PK PSPS V P GES T
Sbjct: 321 FEIVIAVDPRIASMSPSAQFDKEQ*STQILLPPKMETPSPSLLVLHP*CPGESLT 157
Score = 48.3 bits (99), Expect(2) = 3e-091
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +2 / +2
Query: 275 KEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
KEELI+ KTIDGRGV V I NGA +T+Q+
Sbjct: 2 KEELIMNSYKTIDGRGVNVHIANGACITVQY 94
Score = 31.3 bits (62), Expect(2) = 4e-049
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -2 / -2
Query: 369 TNCNVSCAPLVMRTCTPRPSMVL 301
T C V APL M T TP PS+VL
Sbjct: 96 TYCTVMQAPLAMWTFTPLPSIVL 28
>gb|CF401342.1|CF401342 RTWW1_11_C09.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_11_C09_A015 5', mRNA sequence
Length = 779
Score = 329 bits (713), Expect = 2e-089
Identities = 126/218 (57%), Positives = 157/218 (72%)
Frame = +2 / +2
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG+ N+W+DH SLS+C DGLID I ST +TISN +++
Sbjct: 35 VRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQ 214
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD + +D MQ+T+AFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 215 HDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 394
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR++AP N +K+VTK D PE+ W+ W W SE DL + GA+FT +G
Sbjct: 395 GSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNGAFFTQSGAA 574
Query: 977 INRQFNKKDLIKPRNGSYVTRLTRYAGSLACTPGKPC* 1090
+ + K + R S V+ LT YAG L C G C*
Sbjct: 575 SSSSYAKASSLAARPSSLVSSLTTYAGVLQCRAGSRC* 688
Score = 126 bits (270), Expect(2) = 3e-040
Identities = 62/112 (55%), Positives = 71/112 (63%)
Frame = -2 / -3
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S CLVT L GA RLPWL++VG LPP+AY+
Sbjct: 558 VKNAPFNIRSPSDLQFHCLHAFSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYI 379
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMT 625
SQ V*SL TTWK P RHLG+ CT P PKWLKA V CM+ S SL +S+T
Sbjct: 378 SQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLTS*V*SSLWPRSIT 223
Score = 59.7 bits (124), Expect(2) = 3e-040
Identities = 29/55 (52%), Positives = 33/55 (60%)
Frame = -2 / -3
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
LEMV VD M SM PS QL++E+WS+ L PK PSPS V P GES T
Sbjct: 198 LEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPSPSLLVLHP*CVGESLT 34
>gb|CO171062.1|CO171062 NDL1_18_F08.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_18_F08_A029 5', mRNA sequence
Length = 802
Score = 329 bits (713), Expect = 2e-089
Identities = 126/218 (57%), Positives = 157/218 (72%)
Frame = +2 / +1
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG+ N+W+DH SLS+C DGLID I ST +TISN +++
Sbjct: 70 VRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQ 249
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD + +D MQ+T+AFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 250 HDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 429
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR++AP N +K+VTK D PE+ W+ W W SE DL + GA+FT +G
Sbjct: 430 GSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNGAFFTQSGAA 609
Query: 977 INRQFNKKDLIKPRNGSYVTRLTRYAGSLACTPGKPC* 1090
+ + K + R S V+ LT YAG L C G C*
Sbjct: 610 SSSSYAKASSLAARPSSLVSSLTTYAGVLQCRAGSRC* 723
Score = 126 bits (270), Expect(2) = 3e-040
Identities = 62/112 (55%), Positives = 71/112 (63%)
Frame = -2 / -3
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S CLVT L GA RLPWL++VG LPP+AY+
Sbjct: 593 VKNAPFNIRSPSDLQFHCLHAFSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYI 414
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMT 625
SQ V*SL TTWK P RHLG+ CT P PKWLKA V CM+ S SL +S+T
Sbjct: 413 SQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLTS*V*SSLWPRSIT 258
Score = 59.7 bits (124), Expect(2) = 3e-040
Identities = 29/55 (52%), Positives = 33/55 (60%)
Frame = -2 / -3
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
LEMV VD M SM PS QL++E+WS+ L PK PSPS V P GES T
Sbjct: 233 LEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPSPSLLVLHP*CVGESLT 69
>gb|CO200608.1|CO200608 GEO2_8_A10.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_8_A10_A032 5', mRNA sequence
Length = 865
Score = 329 bits (713), Expect = 2e-089
Identities = 126/218 (57%), Positives = 157/218 (72%)
Frame = +2 / -1
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG+ N+W+DH SLS+C DGLID I ST +TISN +++
Sbjct: 853 VRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQ 674
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD + +D MQ+T+AFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 673 HDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 494
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR++AP N +K+VTK D PE+ W+ W W SE DL + GA+FT +G
Sbjct: 493 GSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNGAFFTQSGAA 314
Query: 977 INRQFNKKDLIKPRNGSYVTRLTRYAGSLACTPGKPC* 1090
+ + K + R S V+ LT YAG L C G C*
Sbjct: 313 SSSSYAKASSLAARPSSLVSSLTTYAGVLQCRAGSRC* 200
Score = 126 bits (270), Expect(2) = 3e-040
Identities = 62/112 (55%), Positives = 71/112 (63%)
Frame = -2 / +3
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S CLVT L GA RLPWL++VG LPP+AY+
Sbjct: 330 VKNAPFNIRSPSDLQFHCLHAFSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYI 509
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMT 625
SQ V*SL TTWK P RHLG+ CT P PKWLKA V CM+ S SL +S+T
Sbjct: 510 SQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLTS*V*SSLWPRSIT 665
Score = 59.7 bits (124), Expect(2) = 3e-040
Identities = 29/55 (52%), Positives = 33/55 (60%)
Frame = -2 / +3
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
LEMV VD M SM PS QL++E+WS+ L PK PSPS V P GES T
Sbjct: 690 LEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPSPSLLVLHP*CVGESLT 854
>gb|DR117422.1|DR117422 RTMG1_6_H01.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_6_H01_A029 5', mRNA sequence
Length = 826
Score = 314 bits (681), Expect(2) = 8e-089
Identities = 123/217 (56%), Positives = 155/217 (71%)
Frame = +2 / +2
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT+ DGDGI++FG +++W+DH+SLSNC DGLID I ST +TISN + T+
Sbjct: 128 VRDSPTHYGWRTICDGDGISIFGGSHIWVDHVSLSNCADGLIDAIMGSTAITISNSYFTH 307
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
HN+VML SD + D M++T+A+NHFG GL+QRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 308 HNEVMLLGHSDGYTPDVNMRVTIAYNHFGEGLMQRMPRCRHGYFHVVNNDYTHWEMYAIG 487
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR++AP N AK+VTK+ WKNW W S+ DL + GAYFT +G
Sbjct: 488 GSANPTINSQGNRFLAPANPFAKEVTKRVYGDLDEWKNWNWRSKGDLMLNGAYFTPSGAA 667
Query: 977 INRQFNKKDLIKPRNGSYVTRLTRYAGSLACTPGKPC 1087
+ + K + R+ S V LT+ AG L C G C
Sbjct: 668 ASSTYVKASSLPARSSSLVGPLTQNAGVLFCRKGVRC 778
Score = 160 bits (344), Expect = 2e-038
Identities = 85/178 (47%), Positives = 102/178 (57%)
Frame = -2 / -2
Query: 969 PVTVK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPM 790
P VK AP RS + QFFH+ VT FA GA LP L++VG LPP+
Sbjct: 660 PDGVKYAPFSIRSPFDLQFQFFHSSKSPYTRFVTSFAKGFAGAKNLLP*LLIVGFALPPI 481
Query: 789 AYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLV 610
AY+SQ V*SL TTWK P HLGI C RP PKWL A V + S SL ++TSLW V
Sbjct: 480 AYISQ*V*SLFTTWKYPCLHLGIRCIRPSPKWLYAIVTRIFTSGV*PSL*PNNITSLW*V 301
Query: 609 RWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
+ EMV V+ M SMRPS QL++E WS+ + P +PSPS+ V P GES T
Sbjct: 300 K*LFEMVMAVEPMMASMRPSAQLDKETWSTQM*LPPNMEIPSPSQIVLHP*CVGESLT 127
Score = 34.1 bits (68), Expect(2) = 8e-089
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / +2
Query: 305 TIDGRGVQVRITNGAQLTLQF 367
TIDGRGV V I NG +T+Q+
Sbjct: 2 TIDGRGVNVHIANGPCITVQY 64
>gb|CF478684.1|CF478684 RTWW3_16_H09.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_16_H09_A022 5', mRNA sequence
Length = 770
Score = 326 bits (706), Expect = 2e-088
Identities = 125/221 (56%), Positives = 162/221 (73%)
Frame = +2 / -3
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSPDH+GWRT+SDGDG+++FG++++W+DH SLS+C GLID I ST +TISN +T+
Sbjct: 756 VRDSPDHYGWRTISDGDGVSIFGASHIWVDHCSLSSCTVGLIDAIMGSTAITISNNFMTH 577
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML +D + D MQ+TVAFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 576 HDKVMLLGHNDDYTPDVNMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 397
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR++AP N +K+VTK+ TP+S+W++W W SE DL + GA+F +G
Sbjct: 396 GSANPTINSQGNRFLAPVNRFSKEVTKREYTPKSIWRHWNWRSEGDLMLNGAFFVPSGMD 217
Query: 977 INRQFNKKDLIKPRNGSYVTRLTRYAGSLACTPGKPC*IKP 1099
++ ++K + R VT LT AG L C G C* +P
Sbjct: 216 VSTSYSKASSLSARPSFLVTSLTGNAGVLTCRKGSRC*TQP 94
Score = 188 bits (404), Expect = 1e-046
Identities = 96/178 (53%), Positives = 108/178 (60%)
Frame = -2 / +2
Query: 969 PVTVK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPM 790
P K AP RS S+ Q H GV VT RL GA RLPWL++VG LPPM
Sbjct: 224 PDGTKNAPFNIRSPSDLQFQCLHMLFGVYSRFVTSLEKRLTGARNRLPWLLIVGFALPPM 403
Query: 789 AYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLV 610
AY+SQCV*SL TTWK P RHLGILCTRP PKWLKATV CM+ S SL +SMT W V
Sbjct: 404 AYISQCV*SLFTTWK*PCRHLGILCTRPSPKWLKATVTCMLTSGV*SSLWPRSMTLSWCV 583
Query: 609 RWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
EMV VD M SM P+ QL++E+ S+ + PK PSPS V P SGES T
Sbjct: 584 IKLFEMVIAVDPIMASMSPTVQLDKEQ*STQIWLAPKMETPSPSLIVLHP**SGESLT 757
>gb|CF671517.1|CF671517 RTCNT1_57_D05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_57_D05_A029 5', mRNA sequence
Length = 792
Score = 325 bits (705), Expect = 3e-088
Identities = 127/218 (58%), Positives = 157/218 (72%)
Frame = +2 / +1
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG +N+W+DH SLSNC DGLID I ST +TISN +T+
Sbjct: 79 VRDSPGHYGWRTRSDGDGVSIFGGSNIWVDHCSLSNCADGLIDAILGSTAITISNNFMTH 258
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD++ +D MQ+TVAFNHFG GLVQR+PRCR G+FHVVNNDYTHW MYAIG
Sbjct: 259 HDKVMLLGHSDEYVQDVNMQVTVAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIG 438
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR++AP N +K+VTK D PES W+ W W S+ DL + GA+FT +G
Sbjct: 439 GSANPTINSQGNRFLAPVNRFSKEVTKHEDAPESAWRQWNWRSDGDLMLNGAFFTQSGAA 618
Query: 977 INRQFNKKDLIKPRNGSYVTRLTRYAGSLACTPGKPC* 1090
+ + K + + S V LT AG LAC G C*
Sbjct: 619 ASSSYAKASSLAAKPSSLVGSLTGNAGVLACRKGTRC* 732
Score = 184 bits (397), Expect = 9e-046
Identities = 91/175 (52%), Positives = 106/175 (60%)
Frame = -2 / -2
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S C VT RL GA RLPWL++VG LPP+AY+
Sbjct: 602 VKNAPFNIRSPSDLQFHCRHALSGASSCFVTSLEKRLTGARNRLPWLLIVGLALPPIAYI 423
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLVRWQ 601
SQCV*SL TTWK P RHLG+ CT P PKWLKATV CM+ S SL +SMT W V
Sbjct: 422 SQCV*SLFTTWK*PCRHLGMRCTSPSPKWLKATVTCMLTSCTYSSLWPRSMTLSWCVIKL 243
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
E+V VD + SM PS Q ++E+ S+ L+ PK PSPS V P GES T
Sbjct: 242 FEIVIAVDPRIASMSPSAQFDKEQ*STQILLPPKMETPSPSLLVLHP*CPGESLT 78
>gb|DR117495.1|DR117495 RTMG1_7_G09.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_G09_A029 3', mRNA sequence
Length = 878
Score = 325 bits (705), Expect = 3e-088
Identities = 125/218 (57%), Positives = 156/218 (71%)
Frame = +2 / +2
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SD DG+++FG+ N+W+DH SLS+C DGLID I ST +TISN +++
Sbjct: 5 VRDSPTHYGWRTRSDEDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQ 184
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD + +D MQ+T+AFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 185 HDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 364
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR++AP N +K+VTK D PE+ W+ W W SE DL + GA+FT +G
Sbjct: 365 GSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNGAFFTQSGAA 544
Query: 977 INRQFNKKDLIKPRNGSYVTRLTRYAGSLACTPGKPC* 1090
+ + K + R S V+ LT YAG L C G C*
Sbjct: 545 SSSSYAKASSLAARPSSLVSSLTTYAGVLQCRAGSRC* 658
Score = 126 bits (270), Expect(2) = 4e-039
Identities = 62/112 (55%), Positives = 71/112 (63%)
Frame = -2 / -3
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S CLVT L GA RLPWL++VG LPP+AY+
Sbjct: 528 VKNAPFNIRSPSDLQFHCLHAFSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYI 349
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMT 625
SQ V*SL TTWK P RHLG+ CT P PKWLKA V CM+ S SL +S+T
Sbjct: 348 SQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLTS*V*SSLWPRSIT 193
Score = 56.1 bits (116), Expect(2) = 4e-039
Identities = 28/55 (50%), Positives = 32/55 (58%)
Frame = -2 / -3
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
LEMV VD M SM PS QL++E+WS+ L PK PS S V P GES T
Sbjct: 168 LEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPSSSLLVLHP*CVGESLT 4
>gb|CF401295.1|CF401295 RTWW1_11_C07.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_11_C07_A015 5', mRNA sequence
Length = 755
Score = 314 bits (680), Expect(2) = 4e-088
Identities = 122/211 (57%), Positives = 152/211 (72%)
Frame = +2 / +3
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG +N+W+DH SLSNC DGLID I ST +TISN +T+
Sbjct: 123 VRDSPGHYGWRTRSDGDGVSIFGGSNIWVDHCSLSNCADGLIDAIMGSTAITISNNFMTH 302
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD++ +D MQ+TVAFNHFG GLVQR+PRCR G+FHVVNNDY HW MYAIG
Sbjct: 303 HDKVMLLGHSDEYVQDVNMQVTVAFNHFGEGLVQRIPRCRHGYFHVVNNDYAHWEMYAIG 482
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR++AP N +K+VTK PES W+ W W S+ DL + GA+FT +G
Sbjct: 483 GSANPTINSQGNRFLAPVNRFSKEVTKHEYAPESAWRRWNWRSDGDLMLNGAFFTQSGAA 662
Query: 977 INRQFNKKDLIKPRNGSYVTRLTRYAGSLAC 1069
+ + K + + S V LT AG LAC
Sbjct: 663 ASSSYAKASSLAAKPSSLVGSLTGNAGVLAC 755
Score = 185 bits (399), Expect(2) = 6e-048
Identities = 89/175 (50%), Positives = 105/175 (60%)
Frame = -2 / -2
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG C VT RL GA RLPWL++VG LPP+AY+
Sbjct: 646 VKNAPFNIRSPSDLQFHLRHALSGAYSCFVTSLEKRLTGARNRLPWLLIVGFALPPIAYI 467
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLVRWQ 601
SQC *SL TTWK P RHLG+ CT P PKWLKATV CM+ S SL +S+T W V
Sbjct: 466 SQCA*SLFTTWK*PCRHLGMRCTSPSPKWLKATVTCMLTSCTYSSLWPRSITLSWCVIKL 287
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
E+V VD + SM PS Q ++E+WS+ L+ PK PSPS V P GES T
Sbjct: 286 FEIVIAVDPMIASMSPSAQFDKEQWSTQILLPPKMETPSPSLLVLHP*CPGESLT 122
Score = 32.2 bits (64), Expect(2) = 4e-088
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2 / +3
Query: 311 DGRGVQVRITNGAQLTLQF 367
DGRGV V I NGA +T+Q+
Sbjct: 3 DGRGVNVHIANGACITVQY 59
Score = 26.7 bits (52), Expect(2) = 6e-048
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2 / -2
Query: 369 TNCNVSCAPLVMRTCTPRPS 310
T C V APL M T TP PS
Sbjct: 61 TYCTVMQAPLAM*TFTPLPS 2
>gb|CF402753.1|CF402753 RTWW1_22_G07.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_22_G07_A015 5', mRNA sequence
Length = 807
Score = 325 bits (704), Expect = 4e-088
Identities = 127/218 (58%), Positives = 157/218 (72%)
Frame = +2 / +2
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG +N+W+DH SLSNC DGLID I ST +TISN +T+
Sbjct: 104 VRDSPGHYGWRTRSDGDGVSIFGGSNIWVDHCSLSNCADGLIDAILGSTAITISNNFMTH 283
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD++ +D MQ+TVAFNHFG GLVQR+PRCR G+FHVVNNDYTHW MYAIG
Sbjct: 284 HDKVMLLGHSDEYVQDVNMQVTVAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIG 463
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR++AP N +K+VTK D PES W+ W W S+ DL + GA+FT +G
Sbjct: 464 GSANPTINSQGNRFLAPVNRFSKEVTKHEDAPESAWRQWNWRSDGDLMLNGAFFTQSGAA 643
Query: 977 INRQFNKKDLIKPRNGSYVTRLTRYAGSLACTPGKPC* 1090
+ + K + + S V LT AG LAC G C*
Sbjct: 644 ASSSYAKASSLAAKPSSLVGSLTGNAGVLACRXGTRC* 757
Score = 184 bits (397), Expect = 9e-046
Identities = 91/175 (52%), Positives = 106/175 (60%)
Frame = -2 / -1
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S C VT RL GA RLPWL++VG LPP+AY+
Sbjct: 627 VKNAPFNIRSPSDLQFHCRHALSGASSCFVTSLEKRLTGARNRLPWLLIVGLALPPIAYI 448
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLVRWQ 601
SQCV*SL TTWK P RHLG+ CT P PKWLKATV CM+ S SL +SMT W V
Sbjct: 447 SQCV*SLFTTWK*PCRHLGMRCTSPSPKWLKATVTCMLTSCTYSSLWPRSMTLSWCVIKL 268
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
E+V VD + SM PS Q ++E+ S+ L+ PK PSPS V P GES T
Sbjct: 267 FEIVIAVDPRIASMSPSAQFDKEQ*STQILLPPKMETPSPSLLVLHP*CPGESLT 103
>gb|BM133679.1|BM133679 NXLV_010_G02_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_010_G02 5' similar to Arabidopsis thaliana
sequence At4g24780 pectate lyase like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 807
Score = 324 bits (702), Expect = 8e-088
Identities = 124/214 (57%), Positives = 154/214 (71%)
Frame = +2 / +3
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG+ N+W+DH SLS+C DGLID I ST +TISN +++
Sbjct: 66 VRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQ 245
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD + +D MQ T+AFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 246 HDKVMLLGHSDDYTQDVNMQATIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 425
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR++AP N +K+VTK D PE+ W+ W W SE DL + GA+FT +G
Sbjct: 426 GSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNGAFFTQSGAA 605
Query: 977 INRQFNKKDLIKPRNGSYVTRLTRYAGSLACTPG 1078
+ + K + R S V+ LT YAG L C G
Sbjct: 606 SSSSYAKXSSLAARPSSLVSSLTTYAGVLQCXAG 707
Score = 126 bits (270), Expect(2) = 3e-040
Identities = 62/112 (55%), Positives = 71/112 (63%)
Frame = -2 / -3
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S CLVT L GA RLPWL++VG LPP+AY+
Sbjct: 589 VKNAPFNIRSPSDLQFHCLHAFSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYI 410
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMT 625
SQ V*SL TTWK P RHLG+ CT P PKWLKA V CM+ S SL +S+T
Sbjct: 409 SQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVACMLTS*V*SSLWPRSIT 254
Score = 59.7 bits (124), Expect(2) = 3e-040
Identities = 29/55 (52%), Positives = 33/55 (60%)
Frame = -2 / -3
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
LEMV VD M SM PS QL++E+WS+ L PK PSPS V P GES T
Sbjct: 229 LEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPSPSLLVLHP*CVGESLT 65
>gb|CF401713.1|CF401713 RTWW1_14_C04.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_14_C04_A015 5', mRNA sequence
Length = 733
Score = 311 bits (673), Expect(2) = 1e-087
Identities = 118/203 (58%), Positives = 151/203 (74%)
Frame = +2 / +2
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG +N+W+DH SLSNC DGLID I ST +TISN +T+
Sbjct: 125 VRDSPGHYGWRTRSDGDGVSIFGGSNIWVDHCSLSNCADGLIDAILGSTAITISNNFMTH 304
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H++VML SD++ +D MQ+TVAFNHFG GLVQR+PRCR G+FHVVNNDYTHW MYAIG
Sbjct: 305 HDNVMLLGHSDEYMQDVNMQVTVAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIG 484
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR++AP + ++K+VTK D PES W+ W W S+ DL + GA+FT +G
Sbjct: 485 GSANPTINSQGNRFLAPVDRSSKEVTKHEDAPESAWRQWNWRSDGDLMLNGAFFTQSGAA 664
Query: 977 INRQFNKKDLIKPRNGSYVTRLT 1045
+ + K + + S V LT
Sbjct: 665 ASSSYAKASSLAAKPSSLVGSLT 733
Score = 179 bits (386), Expect(2) = 1e-045
Identities = 90/175 (51%), Positives = 105/175 (60%)
Frame = -2 / -2
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S C VT F R GA RLPWL++VG LPP+AY+
Sbjct: 648 VKNAPFNIRSPSDLQFHCLHALSGASSCFVTSFEERSTGARNRLPWLLIVGLALPPIAYI 469
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLVRWQ 601
SQCV*SL TTWK P RHLG+ T P PKWLKATV CM+ S SL +SMT W V
Sbjct: 468 SQCV*SLFTTWK*PCRHLGMRWTSPSPKWLKATVTCMLTSCIYSSL*PRSMTLSWCVIKL 289
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
E+V VD + SM PS Q ++E+ S+ L+ PK PSPS V P GES T
Sbjct: 288 FEIVIAVDPRIASMSPSAQFDKEQ*STQILLPPKMETPSPSLLVLHP*CPGESLT 124
Score = 33.6 bits (67), Expect(2) = 1e-087
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +2
Query: 308 IDGRGVQVRITNGAQLTLQF 367
IDGRGV V + NGA +T+Q+
Sbjct: 2 IDGRGVNVHVANGACITVQY 61
Score = 24.9 bits (48), Expect(2) = 1e-045
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2 / -2
Query: 369 TNCNVSCAPLVMRTCTPRPSM 307
T C V APL T TP PS+
Sbjct: 63 TYCTVMQAPLATWTFTPLPSI 1
>gb|CF390665.1|CF390665 RTDR2_20_H04.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_20_H04_A021 5', mRNA
sequence
Length = 704
Score = 292 bits (632), Expect(2) = 5e-087
Identities = 109/178 (61%), Positives = 137/178 (76%)
Frame = +2 / +3
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT+ DGDGI++FG ++VW+DH+SL+NC DGLID I ST +TISN + TN
Sbjct: 171 VRDSPTHYGWRTICDGDGISIFGGSHVWVDHVSLANCADGLIDAIMASTAITISNSYFTN 350
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
HN+VML SD + D M++TVA+NHFG GL+QRMPRC+ G+FHVVNNDYTHW MYAIG
Sbjct: 351 HNEVMLLGHSDSYTPDVNMRVTVAYNHFGEGLIQRMPRCKHGYFHVVNNDYTHWEMYAIG 530
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTG 970
GS PTI SQGNR++AP N +AK+VTK+ WK W W S+ D+ + GAYF +G
Sbjct: 531 GSANPTINSQGNRFLAPANPSAKEVTKRIYGDVDQWKYWNWRSKGDMMLNGAYFVPSG 704
Score = 164 bits (353), Expect = 1e-039
Identities = 86/178 (48%), Positives = 104/178 (58%)
Frame = -2 / -2
Query: 969 PVTVK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPM 790
P K AP S + Q+FH + VT FA GA LP L++VG LPP+
Sbjct: 703 PDGTKYAPLSIISPFDLQFQYFH*STSPYIRFVTSFAEGFAGAKNLLP*LLIVGFALPPI 524
Query: 789 AYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLV 610
AY+SQ V*SL TTWK P HLGI C RP PKWL ATV + S LSL ++TSLWLV
Sbjct: 523 AYISQ*V*SLFTTWKYPCLHLGIRCIRPSPKWLYATVTRIFTSGV*LSL*PNNITSLWLV 344
Query: 609 RWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
+ E+V VD M S+RPS QL +E WS+ T + PK +PSPS+ V P GES T
Sbjct: 343 K*LFEIVIAVDAMMASIRPSAQLAKETWSTQTWLPPKMDIPSPSQIVLHP*CVGESLT 170
Score = 50.6 bits (104), Expect(2) = 5e-087
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2 / +3
Query: 263 IITLKEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
+I LKEELI+ KTIDGRGV V I NG +T+Q+
Sbjct: 3 VIQLKEELIMNSYKTIDGRGVNVHIANGPCITVQY 107
>gb|DR168990.1|DR168990 RTPHOS1_29_E12.b1_A029 Roots minus phosphorous Pinus taeda cDNA clone
RTPHOS1_29_E12_A029 3', mRNA sequence
Length = 735
Score = 321 bits (695), Expect = 7e-087
Identities = 126/219 (57%), Positives = 156/219 (71%)
Frame = +2 / -1
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VR SP H+GWRT+ DGDG+++FG ++VW+DH SLSNC DGLID I ST +TISN H T+
Sbjct: 717 VRSSPTHYGWRTMCDGDGVSIFGGSHVWVDHCSLSNCADGLIDAIMASTAITISNNHFTH 538
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML +D + D+ MQ+T+AFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 537 HDKVMLLGHNDAYAPDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 358
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI S+GNRY+AP + AK+VTK+ +TP WKNW W S+ DLF+ GAYF +G
Sbjct: 357 GSANPTINSEGNRYLAPVDRFAKEVTKRVETPHGRWKNWNWRSQGDLFLNGAYFINSGAG 178
Query: 977 INRQFNKKDLIKPRNGSYVTRLTRYAGSLACTPGKPC*I 1093
+ K + + S V LT AG LAC G C*+
Sbjct: 177 AASSYAKASSLGAKPASRVKFLTGNAGPLACRTGSRC*M 61
Score = 167 bits (360), Expect = 1e-040
Identities = 88/178 (49%), Positives = 103/178 (57%)
Frame = -2 / +2
Query: 969 PVTVK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPM 790
P +K AP +S + QFFH GVS VT A R GA P L++VG LPP+
Sbjct: 185 PELMKYAPLRNKSP*DLQFQFFHLPWGVSTRFVTSLAKRSTGARYLFPSLLIVGLALPPI 364
Query: 789 AYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLV 610
AY+SQ V*SL TT K P RHLG+ CTRP PKWLKA V CM S SL +SMT W V
Sbjct: 365 AYISQ*V*SLFTT*KYPWRHLGMRCTRPSPKWLKAIVTCMFLSGA*ASLCPRSMTLSWWV 544
Query: 609 RWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
+ EMV V+ + SM PS QLE E+ S+ T + PK PSPS V P GE RT
Sbjct: 545 K*LFEMVIAVEAMIASMSPSAQLESEQ*STQTWLPPKIETPSPSHIVLHP*CVGELRT 718
>gb|CF402186.1|CF402186 RTWW1_20_F02.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_20_F02_A015 5', mRNA sequence
Length = 785
Score = 320 bits (694), Expect = 1e-086
Identities = 124/218 (56%), Positives = 154/218 (70%)
Frame = +2 / +2
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
V DSP H+GWRT SDGDG+++ G +N+W+DH SLSNC DGLID + ST +TISN +T+
Sbjct: 20 VWDSPGHYGWRTRSDGDGVSIVGGSNIWIDHCSLSNCSDGLIDAVLGSTAITISNNFMTH 199
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD++ +D MQ+TVAFNHFG GLVQR+PRCR G+FHVVNNDYTHW MYAIG
Sbjct: 200 HDKVMLLGHSDEYVQDAKMQVTVAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIG 379
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR++AP N +K+VTK D PES W+ W W S+ DL + GA+FT TG
Sbjct: 380 GSANPTINSQGNRFLAPVNRFSKEVTKHEDAPESAWRRWNWRSDGDLLLNGAFFTQTGAA 559
Query: 977 INRQFNKKDLIKPRNGSYVTRLTRYAGSLACTPGKPC* 1090
+ + K + S V +T AG LAC G C*
Sbjct: 560 ASSSYAKASSLAAMPSSLVVSITGNAGVLACRKGSRC* 673
Score = 188 bits (405), Expect = 7e-047
Identities = 91/178 (51%), Positives = 106/178 (59%)
Frame = -2 / -3
Query: 969 PVTVK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPM 790
PV VK AP RS S+ H SG S C VT RL GA RLPWL++VG LPP+
Sbjct: 552 PV*VKKAPFNNRSPSDLQFHRLHALSGASSCFVTSLEKRLTGARNRLPWLLIVGFALPPI 373
Query: 789 AYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLV 610
AY+SQCV*SL TTWK P RHLG+ CT P PKWLKATV C++ S SL +SMT W V
Sbjct: 372 AYISQCV*SLFTTWK*PCRHLGMRCTSPSPKWLKATVTCILASCTYSSLWPRSMTLSWCV 193
Query: 609 RWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
E+V V+ SM PS Q ++E+WS L+ P PSPS V P GES T
Sbjct: 192 IKLFEIVIAVEPRTASMSPSEQFDKEQWSIQILLPPTMETPSPSLLVLHP*CPGESHT 19
>gb|DR097479.1|DR097479 STRR1_34_H05.g3_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_34_H05_A033 5', mRNA sequence
Length = 799
Score = 315 bits (683), Expect = 3e-085
Identities = 124/218 (56%), Positives = 156/218 (71%)
Frame = +2 / +2
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT+ DGDGI++F +++W+DH+SLSNC DGLID I ST +TISN H T+
Sbjct: 86 VRDSPTHYGWRTMCDGDGISIFEGSHIWVDHVSLSNCADGLIDAIMGSTAITISNNHFTH 265
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
HN+VML SD + D MQIT+A+NHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 266 HNEVMLLGHSDSYTPDVNMQITIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 445
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR+ AP N AK+VTK+ + WK+W W S+ D+ + GAYFT +G
Sbjct: 446 GSANPTINSQGNRFSAPDNSLAKEVTKRINKDADQWKDWNWRSKGDMMLNGAYFTPSGAG 625
Query: 977 INRQFNKKDLIKPRNGSYVTRLTRYAGSLACTPGKPC* 1090
+ + K ++ R + V LT+ AG L+C G C*
Sbjct: 626 ASSAYLKASSLEARPSTLVGPLTQNAGVLSCKKGTRC* 739
Score = 171 bits (367), Expect = 1e-041
Identities = 90/178 (50%), Positives = 105/178 (58%)
Frame = -2 / -2
Query: 969 PVTVK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPM 790
P VK AP S + Q FH + + VT A L GA P L++VG LPP+
Sbjct: 618 PDGVKYAPLSIISPFDLQFQSFH*SASLFIRFVTSLAKLLSGAENLFP*LLIVGFALPPI 439
Query: 789 AYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLV 610
AY+SQ V*SL TTWK P HLGILCTRP PKWL A VICM+ S LSL ++TSLW V
Sbjct: 438 AYISQ*V*SLFTTWKYPCLHLGILCTRPSPKWLYAIVICMLTSGV*LSL*PNNITSLW*V 259
Query: 609 RWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
+W EMV VD M SMRPS QL++E S+ + K MPSPS V P GES T
Sbjct: 258 KWLFEMVIAVDPMMASMRPSAQLDKET*STQMWLPSKMEMPSPSHMVLHP*CVGESLT 85
>gb|DR097773.1|DR097773 STRR1_36_H05.g3_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_36_H05_A033 5', mRNA sequence
Length = 798
Score = 311 bits (673), Expect = 8e-084
Identities = 122/218 (55%), Positives = 155/218 (71%)
Frame = +2 / +2
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT+ DGDGI++F +++W+DH+SLSNC DGLID I ST +TIS+ H T+
Sbjct: 80 VRDSPTHYGWRTMCDGDGISIFEGSHIWVDHVSLSNCADGLIDAIMGSTAITISDNHFTH 259
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
HN+VML SD + D MQIT+A+NHFG GLV RMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 260 HNEVMLLGHSDSYTPDVNMQITIAYNHFGEGLVHRMPRCRHGYFHVVNNDYTHWEMYAIG 439
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR+ AP N AK+VTK+ + WK+W W S+ D+ + GAYFT +G
Sbjct: 440 GSANPTINSQGNRFSAPDNSLAKEVTKRINKDADQWKDWNWRSKGDMMLNGAYFTPSGAG 619
Query: 977 INRQFNKKDLIKPRNGSYVTRLTRYAGSLACTPGKPC* 1090
+ + K ++ R + V LT+ AG L+C G C*
Sbjct: 620 ASSAYLKASSLEARPSTLVGPLTQNAGVLSCKKGTRC* 733
Score = 170 bits (365), Expect = 2e-041
Identities = 90/178 (50%), Positives = 105/178 (58%)
Frame = -2 / -1
Query: 969 PVTVK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPM 790
P VK AP S + Q FH + + VT A L GA P L++VG LPP+
Sbjct: 612 PDGVKYAPLSIISPFDLQFQSFH*SASLFIRFVTSLAKLLSGAENLFP*LLIVGFALPPI 433
Query: 789 AYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLV 610
AY+SQ V*SL TTWK P HLGILCTRP PKWL A VICM+ S LSL ++TSLW V
Sbjct: 432 AYISQ*V*SLFTTWKYPCLHLGILCTRPSPKWLYAIVICMLTSGV*LSL*PNNITSLW*V 253
Query: 609 RWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
+W EMV VD M SMRPS QL++E S+ + K MPSPS V P GES T
Sbjct: 252 KWLSEMVIAVDPMMASMRPSAQLDKET*STQMWLPSKMEMPSPSHMVLHP*CVGESLT 79
>gb|BX255698.1|BX255698 BX255698 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP008G04 similar to PECTATE LYASE PRECURSOR,
mRNA sequence
Length = 667
Score = 308 bits (667), Expect = 5e-083
Identities = 116/200 (58%), Positives = 147/200 (73%)
Frame = +2 / +1
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG+ N+W+DH SLS+C DGLID I ST +TISN +++
Sbjct: 67 VRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQ 246
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD + +D MQ+T+AFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 247 HDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 426
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQ 976
GS PTI SQGNR++AP N +K+VTK D PE+ W+ W W SE DL + GA+FT +G
Sbjct: 427 GSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNGAFFTQSGAA 606
Query: 977 INRQFNKKDLIKPRNGSYVT 1036
+ + K + R S V+
Sbjct: 607 SSSSYAKASSLAARPSSLVS 666
Score = 126 bits (270), Expect(2) = 3e-040
Identities = 62/112 (55%), Positives = 71/112 (63%)
Frame = -2 / -3
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S CLVT L GA RLPWL++VG LPP+AY+
Sbjct: 590 VKNAPFNIRSPSDLQFHCLHAFSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYI 411
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMT 625
SQ V*SL TTWK P RHLG+ CT P PKWLKA V CM+ S SL +S+T
Sbjct: 410 SQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLTS*V*SSLWPRSIT 255
Score = 59.7 bits (124), Expect(2) = 3e-040
Identities = 29/55 (52%), Positives = 33/55 (60%)
Frame = -2 / -3
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
LEMV VD M SM PS QL++E+WS+ L PK PSPS V P GES T
Sbjct: 230 LEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPSPSLLVLHP*CVGESLT 66
>gb|CF478224.1|CF478224 RTWW3_19_G08.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_19_G08_A022 5', mRNA sequence
Length = 764
Score = 304 bits (659), Expect = 7e-082
Identities = 120/216 (55%), Positives = 152/216 (70%)
Frame = +2 / +1
Query: 443 DSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHN 622
DSP H+G RT+ DGDGI++FG ++VW+DH+SL+NC DGLID I ST +TISN + TNHN
Sbjct: 1 DSPTHYGCRTICDGDGISIFGGSHVWVDHVSLANCADGLIDAIMASTAITISNSYFTNHN 180
Query: 623 DVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGS 802
+VML SD + D M++TVA+NHFG GL+QRMPRCR G+FHVVNNDYTHW MYAIGGS
Sbjct: 181 EVMLLGHSDSYTPDVNMRVTVAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGS 360
Query: 803 KAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQIN 982
PTI SQGNR++AP N +AK+VTK+ WK W W S+ D+ + GAYF +G +
Sbjct: 361 ANPTINSQGNRFLAPANPSAKEVTKRIYGHVDQWKYWNWRSKGDMMLNGAYFVPSGAGAS 540
Query: 983 RQFNKKDLIKPRNGSYVTRLTRYAGSLACTPGKPC* 1090
+ K ++ R S V LT+ AG L C G C*
Sbjct: 541 SAYQKASSMEARPSSLVGSLTQNAGVLFCKKGARC* 648
Score = 160 bits (345), Expect = 1e-038
Identities = 85/175 (48%), Positives = 101/175 (57%)
Frame = -2 / -1
Query: 969 PVTVK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPM 790
P K AP S + Q+FH + VT FA GA LP L+MVG LPP+
Sbjct: 527 PDGTKYAPFSIISPFDLQFQYFH*STCPYIRFVTSFAEGFAGAKNLLP*LLMVGFALPPI 348
Query: 789 AYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLV 610
AY+SQ V*SL TTWK P HLGI C RP PKWL ATV + S LSL ++TSLWLV
Sbjct: 347 AYISQ*V*SLFTTWKYPCLHLGIRCIRPSPKWLYATVTRIFTSGV*LSL*PNNITSLWLV 168
Query: 609 RWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGE 445
+ E+V VD M S+RPS QL E WS+ T + PK +PSPS+ V P GE
Sbjct: 167 K*LFEIVIAVDAMMASIRPSAQLANETWSTQTWLPPKMDIPSPSQIVLHP*CVGE 3
>gb|CF389614.1|CF389614 RTDR2_8_D07.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_8_D07_A021 5', mRNA
sequence
Length = 638
Score = 270 bits (583), Expect(2) = 6e-080
Identities = 102/156 (65%), Positives = 123/156 (78%)
Frame = +2 / +3
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++ G +N+W+DH SLSNC DGLID + ST +TISN +T+
Sbjct: 171 VRDSPGHYGWRTRSDGDGVSIVGGSNIWIDHCSLSNCSDGLIDAVLGSTAITISNNFMTH 350
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD++ +D MQ+TVAFNHFG GLVQR+PRCR G+FHVVNNDYTHW MYAIG
Sbjct: 351 HDKVMLLGHSDEYVQDVNMQVTVAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIG 530
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVW 904
GS PTI SQGNR+ AP N +K+VTK D PES W
Sbjct: 531 GSANPTINSQGNRFFAPVNRFSKEVTKHEDAPESAW 638
Score = 178 bits (384), Expect(2) = 1e-046
Identities = 83/156 (53%), Positives = 96/156 (61%)
Frame = -2 / -2
Query: 903 HTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYMSQCV*SLLTTWKKPQRHLG 724
H SG S C VT RL GA RLPWL++VG LPP+AY+SQCV*SL TTWK P RHLG
Sbjct: 637 HALSGASSCFVTSLEKRLTGAKNRLPWLLIVGFALPPIAYISQCV*SLFTTWK*PCRHLG 458
Query: 723 ILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLVRWQLEMVTPVDLAMTSMRPSWQ 544
+ CT P PKWLKATV CM+ S SL +SMT W V E+V V+ SM PS Q
Sbjct: 457 MRCTSPSPKWLKATVTCMLTSCTYSSLWPRSMTLSWCVIKLFEIVIAVEPRTASMSPSEQ 278
Query: 543 LERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
++E+WS L+ P PSPS V P GES T
Sbjct: 277 FDKEQWSIQILLPPTMETPSPSLLVLHP*CPGESLT 170
Score = 49.2 bits (101), Expect(2) = 6e-080
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2 / +3
Query: 263 IITLKEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
+I LKEEL + KTIDGRG V I NGA +T+Q+
Sbjct: 3 VIQLKEELFMNSYKTIDGRGANVHIANGACITVQY 107
Score = 29.0 bits (57), Expect(2) = 1e-046
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2 / -2
Query: 369 TNCNVSCAPLVMRTCTPRPSMVL 301
T C V APL M T P PS+VL
Sbjct: 109 TYCTVMQAPLAMWTFAPLPSIVL 41
>gb|AL751061.1|AL751061 AL751061 RS Pinus pinaster cDNA clone RS03F05 similar to PECTATE
LYASE, mRNA sequence
Length = 607
Score = 296 bits (640), Expect = 3e-079
Identities = 112/178 (62%), Positives = 138/178 (77%)
Frame = +2 / +2
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT+ DGDGI++FG +++W+DH+SLSNC DGLID I ST +TISN + T+
Sbjct: 71 VRDSPTHYGWRTICDGDGISIFGGSHIWVDHVSLSNCADGLIDAIMGSTAITISNSYFTH 250
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
HN+VML SD + D M++T+A+NHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 251 HNEVMLMGHSDSYTPDVNMRVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 430
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTG 970
GS PTI SQGNR+ AP N AK+VTK+ + WKNW W S+ DL + GAYFT +G
Sbjct: 431 GSANPTINSQGNRFSAPANPFAKEVTKRVYGDVNEWKNWNWRSKGDLMLNGAYFTPSG 604
Score = 163 bits (351), Expect = 2e-039
Identities = 87/178 (48%), Positives = 105/178 (58%)
Frame = -2 / -2
Query: 969 PVTVK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPM 790
P VK AP RS + QFFH+ + VT FA GA P L++VG LPP+
Sbjct: 603 PDGVKYAPFSIRSPFDLQFQFFHSFTSPYTRFVTSFAKGFAGAENLFP*LLIVGFALPPI 424
Query: 789 AYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLV 610
AY+SQ V*SLLTTWK P HLGI CTRP PKWL A V + S LSL ++TSLW V
Sbjct: 423 AYISQ*V*SLLTTWKYPCLHLGIRCTRPSPKWLYAIVTRIFTSGV*LSL*PINITSLW*V 244
Query: 609 RWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
+ E+V VD M SMRPS QL++E WS+ + P +PSPS+ V P GES T
Sbjct: 243 K*LFEIVIAVDPMMASMRPSAQLDKETWSTQM*LPPNMEIPSPSQMVLHP*CVGESLT 70
>gb|CF399982.1|CF399982 RTWW1_2_B02.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_2_B02_A015 5', mRNA sequence
Length = 585
Score = 237 bits (512), Expect(2) = 2e-076
Identities = 89/129 (68%), Positives = 105/129 (81%)
Frame = +2 / +1
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT+ DGDGI++FG +++W+DH+SLSNC DGLID I ST +TISN H T+
Sbjct: 199 VRDSPTHYGWRTICDGDGISIFGGSHIWVDHVSLSNCADGLIDAIMGSTAITISNNHFTH 378
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
HN+VML SD + D MQ+T+AFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 379 HNEVMLLGHSDSYTPDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 558
Query: 797 GSKAPTIIS 823
GS PTI S
Sbjct: 559 GSANPTINS 585
Score = 157 bits (337), Expect(2) = 1e-040
Identities = 73/129 (56%), Positives = 87/129 (67%)
Frame = -2 / -2
Query: 822 LMMVGALLPPMAYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSL 643
L++VG LPP+AY+SQ V*SL TTWK P HLGILCTRP PK L A V CM+ S LSL
Sbjct: 584 LLIVGFALPPIAYISQ*V*SLFTTWKYPCLHLGILCTRPSPK*LNAIVTCMLTSGV*LSL 405
Query: 642 ELKSMTSLWLVRWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQ 463
++TSLW V+W EMV VD M SMRPS QL++E WS+ + PK +PSPS+ V
Sbjct: 404 *PNNITSLW*VKWLFEMVIAVDPMMASMRPSAQLDKETWSTQMWLPPKMEIPSPSQIVLH 225
Query: 462 PKWSGESRT 436
P GES T
Sbjct: 224 P*CVGESLT 198
Score = 70.3 bits (147), Expect(2) = 2e-076
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +2 / +1
Query: 233 PLWITFAKTMIITLKEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
PLWI F + M+ITLKEELI+ KTIDGRGV V I NG +T+Q+
Sbjct: 1 PLWIVFERDMVITLKEELIMNSFKTIDGRGVNVHIANGPCITVQY 135
Score = 30.4 bits (60), Expect(2) = 1e-040
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1 / -1
Query: 343 VGDAHLHAAAVNGLVAADDELLLKRDDHGLGEGDPQR 233
V + + A +VN L D+LLL+ D H E DP+R
Sbjct: 111 VCNVDIDAPSVNCLETVHDQLLLQCDHHVSLEDDPER 1
>gb|DR069223.1|DR069223 RTDK1_5_E09.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_5_E09_A029 5', mRNA sequence
Length = 877
Score = 284 bits (614), Expect = 1e-075
Identities = 109/208 (52%), Positives = 147/208 (70%)
Frame = +2 / -2
Query: 473 VSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFSSSDK 652
++ GDGI++ + ++W+DH S+SNC+DGLID + ST +TISN + T+HN VML SD
Sbjct: 765 INHGDGISISTARHIWVDHCSMSNCEDGLIDAVKASTYITISNNYFTHHNKVMLLGHSDD 586
Query: 653 HPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKAPTIISQGN 832
H D++MQ TVA NHFG GLVQRMPRCR+G+FHV NNDYT W MYAIGGS PTI+SQGN
Sbjct: 585 HHHDKVMQATVALNHFGEGLVQRMPRCRFGYFHVFNNDYTEWGMYAIGGSSNPTILSQGN 406
Query: 833 RYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQINRQFNKKDLIK 1012
R++A N K+VTK+ ++ ES WK W W SE+D + GAYFT +G Q+ + +
Sbjct: 405 RFMASGNPMVKEVTKRQNSTESEWKKWNWISEDDALLNGAYFTPSGSQVLSTYTAAYSAR 226
Query: 1013 PRNGSYVTRLTRYAGSLACTPGKPC*IK 1096
P++ + V +TR AG L+C G C*++
Sbjct: 225 PKSSAVVEEITRNAGVLSCKKGTRC*LQ 142
Score = 160 bits (345), Expect = 1e-038
Identities = 82/163 (50%), Positives = 95/163 (58%)
Frame = -2 / +2
Query: 969 PVTVK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPM 790
P VK AP S S+ FFH+ S C LVT AM LP L MVG LPPM
Sbjct: 269 PDGVKYAPFSSASSSDIQFHFFHSLSVEFCLLVTSLTMGFPDAMNLLP*LSMVGFELPPM 448
Query: 789 AYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLV 610
AY+ V*SLL TWK P RHLGI CTRP PKWL ATV C+ S SL ++T LW V
Sbjct: 449 AYIPHSV*SLLNTWKYPNRHLGIRCTRPSPKWLSATVACITLS*WWSSL*PNNITLLW*V 628
Query: 609 RWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSP 481
+ LEMV VD SMRPS QL+ E+WS+H + + +PSP
Sbjct: 629 K*LLEMVI*VDALTASMRPSSQLDIEQWSTHMCLAVEIEIPSP 757
>gb|CF474563.1|CF474563 RTWW2_9_G09.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_9_G09_A021 5', mRNA sequence
Length = 758
Score = 158 bits (340), Expect(2) = 1e-075
Identities = 65/115 (56%), Positives = 74/115 (64%)
Frame = +2 / +3
Query: 23 CRATNPIDRCWRCRQDWATDRKRLARCAKGFGRNTTGGLAGKFYXXXXXXXXXXXNPRPG 202
C NPID CWRC DW +R+RLA CA GFGRN GG G+FY NPRPG
Sbjct: 84 CGTGNPIDDCWRCDPDWENNRQRLADCAIGFGRNAIGGQNGRFYVVTDPNDDNPVNPRPG 263
Query: 203 TLRWGVIQIEPLWITFAKTMIITLKEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
TLR VIQ EPLWI F + M+I LKEELI+ KTIDGRG V I NG +T+Q+
Sbjct: 264 TLRHAVIQNEPLWIIFERDMVIQLKEELIMNSYKTIDGRGANVHIANGPCITVQY 428
Score = 146 bits (313), Expect(2) = 1e-075
Identities = 53/89 (59%), Positives = 70/89 (78%)
Frame = +2 / +3
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG+ N+W+DH SLS+C DGLID I ST +TISN +++
Sbjct: 492 VRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQ 671
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFG 703
H+ VML SD + +D MQ+T+AFNHFG
Sbjct: 672 HDKVMLLGHSDDYTQDVNMQVTIAFNHFG 758
Score = 66.1 bits (138), Expect(3) = 4e-024
Identities = 32/73 (43%), Positives = 38/73 (52%)
Frame = -2 / -2
Query: 252 AKVIHSGSIWMTPHRSVPGRGFXXXXXXXXXXX*NLPASPPVVLRPNPLAHRARRFRSVA 73
+K+IH GS +T R VPGRG *NLP PP+ PNP+A A R +
Sbjct: 313 SKMIHRGSF*ITAWRRVPGRGLTGLSSLGSVTT*NLPFCPPMAFLPNPMAQSASLCRLFS 134
Query: 72 QSCRHRQHRSIGF 34
QS RQ SIGF
Sbjct: 133 QSGSQRQQSSIGF 95
Score = 59.7 bits (124), Expect(3) = 4e-024
Identities = 29/55 (52%), Positives = 33/55 (60%)
Frame = -2 / -2
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
LEMV VD M SM PS QL++E+WS+ L PK PSPS V P GES T
Sbjct: 655 LEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPSPSLLVLHP*CVGESLT 491
Score = 29.0 bits (57), Expect(3) = 4e-024
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -2 / -2
Query: 702 PKWLKATVICMIWSSGCLSLELKSMT 625
PKWLKA V CM+ S SL +S+T
Sbjct: 757 PKWLKAIVTCMLTS*V*SSLWPRSIT 680
>gb|CF400336.1|CF400336 RTWW1_4_C07.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_4_C07_A015 5', mRNA sequence
Length = 788
Score = 280 bits (606), Expect = 1e-074
Identities = 109/195 (55%), Positives = 136/195 (69%)
Frame = +2 / -3
Query: 506 STNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFSSSDKHPEDQIMQITV 685
+ N+W+DH SLS+C DGLID I ST +TISN +++ H+ VML SD + +D MQ+T+
Sbjct: 786 ANNIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQHDKVMLLGHSDDYTQDVNMQVTI 607
Query: 686 AFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKAPTIISQGNRYIAPPNLAAK 865
AFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIGGS PTI SQGNR++AP N +K
Sbjct: 606 AFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPSNAFSK 427
Query: 866 QVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQINRQFNKKDLIKPRNGSYVTRLT 1045
+VTK D PE+ W+ W W SE DL + GA+FT +G + + K + R S V+ LT
Sbjct: 426 EVTKHEDAPENAWRQWNWRSEGDLMLNGAFFTQSGAASSSSYAKASSLAARPSSLVSSLT 247
Query: 1046 RYAGSLACTPGKPC* 1090
YAG L C G C*
Sbjct: 246 TYAGVLQCRAGSRC* 202
Score = 126 bits (270), Expect(2) = 3e-034
Identities = 62/112 (55%), Positives = 71/112 (63%)
Frame = -2 / +2
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S CLVT L GA RLPWL++VG LPP+AY+
Sbjct: 332 VKNAPFNIRSPSDLQFHCLHAFSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYI 511
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMT 625
SQ V*SL TTWK P RHLG+ CT P PKWLKA V CM+ S SL +S+T
Sbjct: 512 SQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLTS*V*SSLWPRSIT 667
Score = 40.0 bits (81), Expect(2) = 3e-034
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -2 / +2
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTL 511
LEMV VD M SM PS QL++E+WS+ L
Sbjct: 692 LEMVIAVDPRMASMSPSVQLDKEQWSTQIL 781
>gb|CV033562.1|CV033562 RTNACL1_35_F12.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_35_F12_A029 3', mRNA sequence
Length = 812
Score = 280 bits (605), Expect = 2e-074
Identities = 109/193 (56%), Positives = 135/193 (69%)
Frame = +2 / +1
Query: 512 NVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFSSSDKHPEDQIMQITVAF 691
N+W+DH SLS+C DGLID I ST +TISN +++ H+ VML SD + +D MQ+T+AF
Sbjct: 4 NIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAF 183
Query: 692 NHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKAPTIISQGNRYIAPPNLAAKQV 871
NHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIGGS PTI SQGNR++AP N +K+V
Sbjct: 184 NHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPSNAFSKEV 363
Query: 872 TKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQINRQFNKKDLIKPRNGSYVTRLTRY 1051
TK D PE+ W+ W W SE DL + GA+FT +G + + K + R S V+ LT Y
Sbjct: 364 TKHEDAPENAWRQWNWRSEGDLMLNGAFFTQSGAASSSSYAKASSLAARPSSLVSSLTTY 543
Query: 1052 AGSLACTPGKPC* 1090
AG L C G C*
Sbjct: 544 AGVLQCRAGSRC* 582
Score = 126 bits (270), Expect(2) = 3e-034
Identities = 62/112 (55%), Positives = 71/112 (63%)
Frame = -2 / -1
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S CLVT L GA RLPWL++VG LPP+AY+
Sbjct: 452 VKNAPFNIRSPSDLQFHCLHAFSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYI 273
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMT 625
SQ V*SL TTWK P RHLG+ CT P PKWLKA V CM+ S SL +S+T
Sbjct: 272 SQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLTS*V*SSLWPRSIT 117
Score = 40.0 bits (81), Expect(2) = 3e-034
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -2 / -1
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTL 511
LEMV VD M SM PS QL++E+WS+ L
Sbjct: 92 LEMVIAVDPRMASMSPSVQLDKEQWSTQIL 3
>gb|CF669425.1|CF669425 RTCNT1_43_G02.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_43_G02_A029 3', mRNA sequence
Length = 655
Score = 210 bits (453), Expect(3) = 1e-073
Identities = 78/119 (65%), Positives = 96/119 (80%)
Frame = +2 / -2
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++ G +N+W+DH SLSNC DGLID + ST +TISN +T+
Sbjct: 474 VRDSPGHYGWRTRSDGDGVSIVGGSNIWIDHCSLSNCADGLIDAVLGSTAITISNNFMTH 295
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAI 793
H+ VML SD++ +D MQ+TVAFN FG GLVQR+PRCR G+FHVVNNDYTHW MYAI
Sbjct: 294 HDKVMLLGHSDEYMQDVNMQVTVAFNRFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAI 118
Score = 127 bits (272), Expect(3) = 5e-040
Identities = 63/127 (49%), Positives = 76/127 (59%)
Frame = -2 / +2
Query: 816 MVGALLPPMAYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLEL 637
++G+ +AY+SQCV*SL TTWK P RHLG+ CT P PK LKATV CM+ S SL
Sbjct: 95 LLGSHFHQIAYISQCV*SLFTTWK*PCRHLGMRCTSPSPKRLKATVTCMLTSCIYSSL*P 274
Query: 636 KSMTSLWLVRWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPK 457
+SMT W V E+V VD SM PS Q ++E+WS L+ P PSPS V P
Sbjct: 275 RSMTLSWCVIKLFEIVIAVDPRTASMSPSAQFDKEQWSIQILLPPTMETPSPSLLVLHP* 454
Query: 456 WSGESRT 436
GES T
Sbjct: 455 CPGESLT 475
Score = 54.7 bits (113), Expect(3) = 1e-073
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2 / -3
Query: 794 GGSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWK 907
GGS PTI SQGNR+ AP N +K+VTK D ESVW+
Sbjct: 116 GGSANPTINSQGNRFHAPVNPFSKEVTKHEDALESVWR 3
Score = 51.9 bits (107), Expect(3) = 1e-073
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +2 / -2
Query: 254 KTMIITLKEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
+ M+I LKEEL + KTIDGRG V I NGA +T+Q+
Sbjct: 651 RDMVIQLKEELFMNSYKTIDGRGANVHIANGACITVQY 538
Score = 49.2 bits (101), Expect(3) = 5e-040
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = -2 / +1
Query: 909 FFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPP 793
F HT S S C VT L GA RLPWL++VG LPP
Sbjct: 1 FLHTLSSASSCFVTSLEKGLTGAWNRLPWLLIVGFALPP 117
Score = 27.2 bits (53), Expect(3) = 5e-040
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2 / +2
Query: 369 TNCNVSCAPLVMRTCTPRPSMVL 301
T C V APL + T P PS+VL
Sbjct: 536 TYCTVMQAPLAIWTFAPLPSIVL 604
>gb|DR161241.1|DR161241 RTFE1_10_E01.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_10_E01_A029 5', mRNA sequence
Length = 791
Score = 275 bits (596), Expect = 3e-073
Identities = 108/191 (56%), Positives = 133/191 (69%)
Frame = +2 / -2
Query: 518 WLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFSSSDKHPEDQIMQITVAFNH 697
W+DH SLS+C DGLID I ST +TISN +++ H+ VML SD + +D MQ+T+AFNH
Sbjct: 790 WVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAFNH 611
Query: 698 FGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKAPTIISQGNRYIAPPNLAAKQVTK 877
FG GLVQRMPRCR G+FHVVNNDYTHW MYAIGGS PTI SQGNR++AP N +K+VTK
Sbjct: 610 FGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPSNAFSKEVTK 431
Query: 878 QHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQINRQFNKKDLIKPRNGSYVTRLTRYAG 1057
D PE+ W+ W W SE DL + GA+FT +G + + K + R S V+ LT YAG
Sbjct: 430 HEDAPENAWRQWNWRSEGDLMLNGAFFTQSGAASSSSYAKASSLAARPSSLVSSLTTYAG 251
Query: 1058 SLACTPGKPC* 1090
L C G C*
Sbjct: 250 VLQCRAGSRC* 218
Score = 126 bits (270), Expect(2) = 7e-034
Identities = 62/112 (55%), Positives = 71/112 (63%)
Frame = -2 / +3
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S CLVT L GA RLPWL++VG LPP+AY+
Sbjct: 348 VKNAPFNIRSPSDLQFHCLHAFSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYI 527
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMT 625
SQ V*SL TTWK P RHLG+ CT P PKWLKA V CM+ S SL +S+T
Sbjct: 528 SQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLTS*V*SSLWPRSIT 683
Score = 38.6 bits (78), Expect(2) = 7e-034
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -2 / +3
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSS 520
LEMV VD M SM PS QL++E+WS+
Sbjct: 708 LEMVIAVDPRMASMSPSVQLDKEQWST 788
>gb|CF665374.1|CF665374 RTCNT1_15_D05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_15_D05_A029 5', mRNA sequence
Length = 583
Score = 241 bits (520), Expect(2) = 8e-072
Identities = 90/135 (66%), Positives = 110/135 (81%)
Frame = +2 / +3
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG+ N+W+DH SLS+C DGLID I ST +TISN +++
Sbjct: 177 VRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQ 356
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML SD + +D MQ+T+AFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 357 HDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 536
Query: 797 GSKAPTIISQGNRYI 841
GS PTI SQGNR++
Sbjct: 537 GSANPTINSQGNRFL 581
Score = 101 bits (215), Expect(2) = 1e-032
Identities = 44/70 (62%), Positives = 52/70 (74%)
Frame = -2 / -1
Query: 834 RLPWLMMVGALLPPMAYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSG 655
RLPWL++VG LPP+AY+SQ V*SL TTWK P RHLG+ CT P PKWLKA V CM+ S
Sbjct: 574 RLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLTS*V 395
Query: 654 CLSLELKSMT 625
SL +S+T
Sbjct: 394 *SSLWPRSIT 365
Score = 59.7 bits (124), Expect(2) = 1e-032
Identities = 29/55 (52%), Positives = 33/55 (60%)
Frame = -2 / -1
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
LEMV VD M SM PS QL++E+WS+ L PK PSPS V P GES T
Sbjct: 340 LEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPSPSLLVLHP*CVGESLT 176
Score = 51.0 bits (105), Expect(2) = 8e-072
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +2 / +3
Query: 260 MIITLKEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
M+I LKEELI+ KTIDGRG V I NG +T+Q+
Sbjct: 6 MVIQLKEELIMNSYKTIDGRGANVHIANGPCITVQY 113
>gb|CF670977.1|CF670977 RTCNT1_53_H01.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_53_H01_A029 5', mRNA sequence
Length = 640
Score = 270 bits (584), Expect = 1e-071
Identities = 107/196 (54%), Positives = 137/196 (69%)
Frame = +2 / +2
Query: 512 NVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFSSSDKHPEDQIMQITVAF 691
++W+DH SLS+C DGLID I ST +TISN +T+H+ VML +D + D MQ+TVAF
Sbjct: 2 HIWVDHCSLSSCTDGLIDAIMGSTAITISNNFMTHHDKVMLLGHNDDYTPDVNMQVTVAF 181
Query: 692 NHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKAPTIISQGNRYIAPPNLAAKQV 871
NHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIGGS PTI SQGNR++AP N +K+V
Sbjct: 182 NHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPVNRFSKEV 361
Query: 872 TKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQINRQFNKKDLIKPRNGSYVTRLTRY 1051
TK+ TP+S+W++W W S+ DL + GA+F +G ++ ++K R VT LT
Sbjct: 362 TKREYTPKSIWRHWNWRSKGDLMLNGAFFVPSGMDVSTSYSKASSPSARPSFLVTSLTGN 541
Query: 1052 AGSLACTPGKPC*IKP 1099
AG L C G C* +P
Sbjct: 542 AGVLTCRKGSRC*TQP 589
Score = 162 bits (349), Expect = 4e-039
Identities = 82/150 (54%), Positives = 92/150 (61%)
Frame = -2 / -2
Query: 969 PVTVK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPM 790
P K AP RS + Q H GV VT RL GA RLPWL++VG LPPM
Sbjct: 459 PDGTKNAPFNIRSPFDLQFQCLHMLFGVYSRFVTSLEKRLTGARNRLPWLLIVGFALPPM 280
Query: 789 AYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLV 610
AY+SQCV*SL TTWK P RHLGILCT P PKWLKATV CM+ S SL +SMT W V
Sbjct: 279 AYISQCV*SLFTTWK*PCRHLGILCTSPSPKWLKATVTCMLTSGV*SSLWPRSMTLSWCV 100
Query: 609 RWQLEMVTPVDLAMTSMRPSWQLERERWSS 520
EMV VD M SM PS QL++E+ S+
Sbjct: 99 IKLFEMVIAVDPIMASMSPSVQLDKEQ*ST 10
>gb|CR354745.1|CR354745 CR354745 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 125H08, mRNA sequence
Length = 582
Score = 268 bits (580), Expect = 5e-071
Identities = 101/158 (63%), Positives = 124/158 (78%)
Frame = +2 / +3
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VR SP H+GWRT+ DGDG+++FG ++VW+DH SLS C DGLID I ST +TISN H T+
Sbjct: 108 VRSSPTHYGWRTMCDGDGVSIFGGSHVWVDHCSLSKCADGLIDAIMASTAITISNNHFTH 287
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML +D + D+ MQ+T+AFNHFG GLVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 288 HDKVMLLGHNDGYAPDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 467
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKN 910
GS PTI S+GNRY+AP + AK++TK+ DTP WKN
Sbjct: 468 GSANPTINSEGNRYLAPVDRFAKEITKRVDTPHGRWKN 581
Score = 154 bits (330), Expect = 2e-036
Identities = 80/158 (50%), Positives = 92/158 (58%)
Frame = -2 / -3
Query: 909 FFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYMSQCV*SLLTTWKKPQRH 730
FFH GVS V A R GA P L++VG LPP+AY+SQ V*SLLTT K P RH
Sbjct: 580 FFHLPWGVSTRFVISLAKRSTGARYLFPSLLIVGLALPPIAYISQ*V*SLLTT*KYPWRH 401
Query: 729 LGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLVRWQLEMVTPVDLAMTSMRPS 550
LG+ CTRP PKWL A V CM S SL +SMT W V+ EMV V+ + SM PS
Sbjct: 400 LGMRCTRPSPKWLNAIVTCMFLSGA*PSLCPRSMTLSWWVK*LFEMVIAVEAMIASMSPS 221
Query: 549 WQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
LE E+ S+ T + PK PSPS V P GE RT
Sbjct: 220 AHLESEQ*STQTWLPPKIETPSPSHIVLHP*CVGELRT 107
>gb|BQ696543.1|BQ696543 NXPV_042_E02_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_042_E02 5' similar to Arabidopsis
thaliana sequence At5g48900 pectate lyase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 629
Score = 235 bits (508), Expect(2) = 7e-071
Identities = 88/135 (65%), Positives = 106/135 (78%)
Frame = +2 / +3
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VR SP H+GWRT+ DGDG+++FG ++VW+DH SLSNC DGLID I ST +TISN H T+
Sbjct: 180 VRSSPTHYGWRTMCDGDGVSIFGGSHVWVDHCSLSNCADGLIDAIMASTAITISNNHFTH 359
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
H+ VML +D + D+ MQ+T+AFNHFG LVQRMPRCR G+FHVVNNDYTHW MYAIG
Sbjct: 360 HDKVMLLGHNDAYAPDKNMQVTIAFNHFGEXLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 539
Query: 797 GSKAPTIISQGNRYI 841
GS PTI GNRY+
Sbjct: 540 GSANPTINXXGNRYL 584
Score = 136 bits (291), Expect(2) = 5e-035
Identities = 68/131 (51%), Positives = 80/131 (61%)
Frame = -2 / -2
Query: 828 PWLMMVGALLPPMAYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCL 649
P ++VG LPP+AY+SQ V*SL TT K P RHLG+ CTR PKWLKA V CM S
Sbjct: 571 PXXLIVGLALPPIAYISQ*V*SLFTT*KYPWRHLGMRCTRXSPKWLKAIVTCMFLSGA*A 392
Query: 648 SLELKSMTSLWLVRWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETV 469
SL +SMT W V+ EMV V+ + SM PS QLE E+ S+ T + PK PSPS V
Sbjct: 391 SLCPRSMTLSWWVK*LFEMVIAVEAMIASMSPSAQLESEQ*STQTWLPPKIETPSPSHIV 212
Query: 468 RQPKWSGESRT 436
P GE RT
Sbjct: 211 LHP*CVGELRT 179
Score = 53.3 bits (110), Expect(2) = 7e-071
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +2 / +3
Query: 254 KTMIITLKEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
+ M+I LKEELI+ KTIDGRGV V I NG +T+Q+
Sbjct: 3 RDMVIMLKEELIMNSYKTIDGRGVNVHIANGPCITVQY 116
Score = 32.7 bits (65), Expect(2) = 5e-035
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = -2 / -2
Query: 369 TNCNVSCAPLVMRTCTPRPSMVL 301
T C V P M T TPRPSMVL
Sbjct: 118 TYCTVMQGPFAM*TLTPRPSMVL 50
>gb|CV033540.1|CV033540 RTNACL1_35_D11.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_35_D11_A029 3', mRNA sequence
Length = 876
Score = 267 bits (577), Expect = 1e-070
Identities = 107/194 (55%), Positives = 133/194 (68%)
Frame = +2 / +3
Query: 509 TNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFSSSDKHPEDQIMQITVA 688
+N+W+DH SLSNC DGLID + ST +TISN +T+H+ VML SD++ +D MQ+TVA
Sbjct: 6 SNIWIDHCSLSNCADGLIDAVLGSTAITISNNFMTHHDKVMLLGHSDEYMQDVNMQVTVA 185
Query: 689 FNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKAPTIISQGNRYIAPPNLAAKQ 868
FN FG GLVQR+PRCR G+FHVVNNDYTHW MYAIGGS PTI SQGNR+ AP N +K+
Sbjct: 186 FNRFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFHAPVNPFSKE 365
Query: 869 VTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQINRQFNKKDLIKPRNGSYVTRLTR 1048
VTK D ESVW+ W W S DL + GA+FT +G + + K + + S V LTR
Sbjct: 366 VTKHEDALESVWREWNWRSNGDLMLNGAFFTQSGAAASSSYAKASSLAAKPSSLVGSLTR 545
Query: 1049 YAGSLACTPGKPC* 1090
+G L C G C*
Sbjct: 546 NSGVLVCRKGSRC* 587
Score = 155 bits (334), Expect = 4e-037
Identities = 77/151 (50%), Positives = 90/151 (59%)
Frame = -2 / -3
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS + HT S S C VT L GA RLPWL++VG LPP+AY+
Sbjct: 457 VKNAPFSIRSPFDLQFHSLHTLSSASSCFVTSLEKGLTGAWNRLPWLLIVGFALPPIAYI 278
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLVRWQ 601
SQCV*SL TTWK P RHLG+ CT P PK LKATV CM+ S SL +SMT W V
Sbjct: 277 SQCV*SLFTTWK*PCRHLGMRCTSPSPKRLKATVTCMLTSCIYSSL*PRSMTLSWCVIKL 98
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLV 508
E+V VD SM PS Q ++E+WS L+
Sbjct: 97 FEIVIAVDPRTASMSPSAQFDKEQWSIQILL 5
>gb|DR017596.1|DR017596 STRS1_17_G04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_17_G04_A034 3', mRNA sequence
Length = 761
Score = 265 bits (573), Expect = 5e-070
Identities = 104/191 (54%), Positives = 134/191 (70%)
Frame = +2 / +1
Query: 524 DHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFSSSDKHPEDQIMQITVAFNHFG 703
DH S+SNC+DGLID + ST +TISN + T+HN VML SD H D++MQ TVA NHFG
Sbjct: 1 DHCSMSNCEDGLIDAVKASTYITISNNYFTHHNKVMLLGHSDDHHHDKVMQATVALNHFG 180
Query: 704 RGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKAPTIISQGNRYIAPPNLAAKQVTKQH 883
GLVQRMPRCR+G+FHV NNDYT W MYAIGGS PTI+SQGNR++A N K+VTK+
Sbjct: 181 EGLVQRMPRCRFGYFHVFNNDYTEWGMYAIGGSSNPTILSQGNRFMASGNPMVKEVTKRQ 360
Query: 884 DTPESVWKNWVWHSENDLFMEGAYFTVTGGQINRQFNKKDLIKPRNGSYVTRLTRYAGSL 1063
++ ES WK W W SE+D + GAYFT +G Q+ + +P++ + V +TR AG L
Sbjct: 361 NSAESEWKKWNWISEDDALLNGAYFTPSGSQVLSTYTAAYSARPKSSAVVEEITRNAGVL 540
Query: 1064 ACTPGKPC*IK 1096
+C G C*++
Sbjct: 541 SCKKGTRC*LQ 573
Score = 150 bits (322), Expect = 2e-035
Identities = 77/148 (52%), Positives = 86/148 (58%)
Frame = -2 / -1
Query: 969 PVTVK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPM 790
P VK AP S S+ FFH+ S C LVT AM LP L MVG LPPM
Sbjct: 446 PDGVKYAPFSSASSSDIQFHFFHSLSAEFCLLVTSLTMGFPDAMNLLP*LSMVGFELPPM 267
Query: 789 AYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLV 610
AY+ V*SLL TWK P RHLGI CTRP PKWL ATV C+ S SL ++T LW V
Sbjct: 266 AYIPHSV*SLLNTWKYPNRHLGIRCTRPSPKWLSATVACITLS*WWSSL*PNNITLLW*V 87
Query: 609 RWQLEMVTPVDLAMTSMRPSWQLERERW 526
+ LEMV VD SMRPS QL+ E+W
Sbjct: 86 K*LLEMVI*VDALTASMRPSSQLDIEQW 3
>gb|CV033650.1|CV033650 RTNACL1_35_F12.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_35_F12_A029 5', mRNA sequence
Length = 775
Score = 260 bits (563), Expect = 1e-068
Identities = 104/187 (55%), Positives = 128/187 (68%)
Frame = +2 / +2
Query: 530 LSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFSSSDKHPEDQIMQITVAFNHFGRG 709
L L +C DGLID I ST +TISN +++ H+ VML SD + +D MQ+T+AFNHFG G
Sbjct: 2 LLLVSCTDGLIDAIRGSTAITISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAFNHFGEG 181
Query: 710 LVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKAPTIISQGNRYIAPPNLAAKQVTKQHDT 889
LVQRMPRCR G+FHVVNNDYTHW MYAIGGS PTI SQGNR++AP N +K+VTK D
Sbjct: 182 LVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPSNAFSKEVTKHEDA 361
Query: 890 PESVWKNWVWHSENDLFMEGAYFTVTGGQINRQFNKKDLIKPRNGSYVTRLTRYAGSLAC 1069
PE+ W+ W W SE DL + GA+FT +G + + K + R S V+ LT YAG L C
Sbjct: 362 PENAWRQWNWRSEGDLMLNGAFFTQSGAASSSSYAKASSLAARPSSLVSSLTTYAGVLQC 541
Query: 1070 TPGKPC* 1090
G C*
Sbjct: 542 RAGSRC* 562
Score = 126 bits (270), Expect = 3e-028
Identities = 62/112 (55%), Positives = 71/112 (63%)
Frame = -2 / -2
Query: 960 VK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYM 781
VK AP RS S+ H SG S CLVT L GA RLPWL++VG LPP+AY+
Sbjct: 432 VKNAPFNIRSPSDLQFHCLHAFSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYI 253
Query: 780 SQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMT 625
SQ V*SL TTWK P RHLG+ CT P PKWLKA V CM+ S SL +S+T
Sbjct: 252 SQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLTS*V*SSLWPRSIT 97
>gb|DR100690.1|DR100690 STRR1_66_H02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_66_H02_A033 5', mRNA sequence
Length = 816
Score = 258 bits (557), Expect = 8e-068
Identities = 101/198 (51%), Positives = 133/198 (67%)
Frame = +2 / +1
Query: 470 TVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFSSSD 649
TVSDGDGI++FG +W+DH SLS C DGLID I ST +TISN + T+H++VML SD
Sbjct: 1 TVSDGDGISIFGGRYIWVDHCSLSKCNDGLIDAIMGSTAITISNNYFTHHDEVMLLGHSD 180
Query: 650 KHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKAPTIISQG 829
+ +D IMQ+T+AFN+FG GL+QRMPRCR G+FHVVNN Y HW MYAIGGS PTI S+G
Sbjct: 181 SYVQDVIMQVTIAFNYFGEGLIQRMPRCRHGYFHVVNNQYAHWEMYAIGGSANPTINSEG 360
Query: 830 NRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQINRQFNKKDLI 1009
N+++AP + AK+VTK+ D W W W S DL + GA+F +G + + +
Sbjct: 361 NKFLAPDDDNAKEVTKRLDAGPDEWTQWNWRSAGDLMLNGAFFVASGAESTDSYALASSL 540
Query: 1010 KPRNGSYVTRLTRYAGSL 1063
+ + V +T AG L
Sbjct: 541 GAKPVALVETITEEAGVL 594
Score = 144 bits (308), Expect = 2e-033
Identities = 79/166 (47%), Positives = 94/166 (56%)
Frame = -2 / -2
Query: 969 PVTVK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPM 790
P K AP RS ++ H+ S LVT A GA LP L++VG LPP+
Sbjct: 500 PDATKKAPFSIRSPADLQFHCVHSSGPASSLLVTSLALSSSGAKNLLPSLLIVGLALPPI 321
Query: 789 AYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLV 610
AY+SQC L TT K P RHLGIL P PK LKA V C+I S LSL +SMTS V
Sbjct: 320 AYISQCAYWLFTT*KYPCRHLGILWISPSPK*LKAIVTCIITSCT*LSL*PRSMTSS*CV 141
Query: 609 RWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSET 472
+ EMV VD + S+RPS LERE+WS+ PK MPSPS+T
Sbjct: 140 K*LFEMVMAVDPMIASIRPSLHLEREQWSTQI*RPPKIEMPSPSDT 3
>gb|DR048046.1|DR048046 RTBOR1_6_F07.b2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_6_F07_A029 3', mRNA sequence
Length = 682
Score = 158 bits (339), Expect(2) = 3e-067
Identities = 64/117 (54%), Positives = 74/117 (63%)
Frame = +2 / -3
Query: 17 VDCRATNPIDRCWRCRQDWATDRKRLARCAKGFGRNTTGGLAGKFYXXXXXXXXXXXNPR 196
+ C NPID CWRC DW +R RLA CA GFGRN GG G+FY +PR
Sbjct: 626 LSCGTGNPIDDCWRCDPDWVNNRMRLADCAIGFGRNAIGGQNGRFYVVTDPNDYDAVDPR 447
Query: 197 PGTLRWGVIQIEPLWITFAKTMIITLKEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
PGTLR VIQ EPLWI F + M+I LKEELI+ KTIDGRG V I NG +T+Q+
Sbjct: 446 PGTLRHAVIQTEPLWIIFQRDMVIQLKEELIMNSYKTIDGRGANVHIANGPCITVQY 276
Score = 118 bits (253), Expect(2) = 3e-067
Identities = 42/66 (63%), Positives = 56/66 (84%)
Frame = +2 / -3
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSPDH+GWRT+SDGDG+++FG++++W+DH SLS+C DGLID I ST +TISN +T
Sbjct: 212 VRDSPDHYGWRTISDGDGVSIFGASHIWVDHCSLSSCTDGLIDAIMGSTAITISNNFMTX 33
Query: 617 HNDVML 634
H+ VML
Sbjct: 32 HDKVML 15
>gb|CF401168.1|CF401168 RTWW1_10_B05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_10_B05_A015 5', mRNA sequence
Length = 738
Score = 142 bits (305), Expect(3) = 1e-066
Identities = 59/105 (56%), Positives = 68/105 (64%)
Frame = +2 / +1
Query: 53 WRCRQDWATDRKRLARCAKGFGRNTTGGLAGKFYXXXXXXXXXXXNPRPGTLRWGVIQIE 232
WRC DW +R+RLA CA GFGRN GG G+FY NPRPGTLR VIQ E
Sbjct: 1 WRCDADWENNRQRLADCAIGFGRNAIGGQNGRFYVVTDPNDDNPVNPRPGTLRHAVIQNE 180
Query: 233 PLWITFAKTMIITLKEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
PLWI F + M+I LKEELI+ KTIDGRG V I NG +T+Q+
Sbjct: 181 PLWIIFERDMVIQLKEELIMNSYKTIDGRGANVHIANGPCITVQY 315
Score = 110 bits (235), Expect(3) = 1e-066
Identities = 39/64 (60%), Positives = 52/64 (81%)
Frame = +2 / +1
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++FG+ N+W+DH SLS+C DGLID I ST +TISN +++
Sbjct: 379 VRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQ 558
Query: 617 HNDV 628
H+ V
Sbjct: 559 HDKV 570
Score = 59.7 bits (124), Expect(3) = 3e-021
Identities = 29/55 (52%), Positives = 33/55 (60%)
Frame = -2 / -2
Query: 600 LEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
LEMV VD M SM PS QL++E+WS+ L PK PSPS V P GES T
Sbjct: 542 LEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPSPSLLVLHP*CVGESLT 378
Score = 56.5 bits (117), Expect(3) = 3e-021
Identities = 27/66 (40%), Positives = 33/66 (50%)
Frame = -2 / -2
Query: 252 AKVIHSGSIWMTPHRSVPGRGFXXXXXXXXXXX*NLPASPPVVLRPNPLAHRARRFRSVA 73
+K+IH GS +T R VPGRG *NLP PP+ PNP+A A R +
Sbjct: 200 SKMIHRGSF*ITAWRRVPGRGLTGLSSLGSVTT*NLPFCPPMAFLPNPMAQSASLCRLFS 21
Query: 72 QSCRHR 55
QS R
Sbjct: 20 QSASQR 3
Score = 40.5 bits (82), Expect(3) = 1e-066
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2 / +2
Query: 626 VMLFSSSDKHPEDQIMQITVAFNHFG 703
VML SD + +D MQ+T+AFNHFG
Sbjct: 659 VMLLGHSDDYTQDVNMQVTIAFNHFG 736
Score = 29.0 bits (57), Expect(3) = 3e-021
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -2 / -1
Query: 702 PKWLKATVICMIWSSGCLSLELKSMT 625
PKWLKA V CM+ S SL +S+T
Sbjct: 735 PKWLKAIVTCMLTS*V*SSLWPRSIT 658
>gb|BG040297.1|BG040297 NXSI_110_G02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_110_G02 5' similar to Arabidopsis thaliana
sequence At3g24670 pectate lyase, putative see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 569
Score = 251 bits (543), Expect = 7e-066
Identities = 95/161 (59%), Positives = 117/161 (72%)
Frame = +2 / +3
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT+ DGDGI++FG +++W+DH+SLSNC DGLID I ST +TISN + T+
Sbjct: 84 VRDSPTHYGWRTICDGDGISIFGGSHIWVDHVSLSNCADGLIDAIMGSTAITISNSYFTH 263
Query: 617 HNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIG 796
HN+VML SD + D M++T+A+NHFG L+QRMPRC G+FH VNNDYTHW MYAIG
Sbjct: 264 HNEVMLMGHSDSYTPDVNMRVTIAYNHFGEXLIQRMPRCXHGYFHXVNNDYTHWEMYAIG 443
Query: 797 GSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVW 919
GS PT S GNR+ AP N AK TK+ WKN W
Sbjct: 444 GSANPTXXSXGNRFSAPANPFAKXXTKRVYGDXXEWKNXXW 566
Score = 143 bits (306), Expect = 3e-033
Identities = 75/158 (47%), Positives = 88/158 (55%)
Frame = -2 / -2
Query: 909 FFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYMSQCV*SLLTTWKKPQRH 730
FFH+ V FA GA P L VG LPP+AY+SQ V*SL T WK P H
Sbjct: 556 FFHSXXSPYTRFVXXFAKGFAGAENLFPXLXXVGFALPPIAYISQ*V*SLFTXWKYPXLH 377
Query: 729 LGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLVRWQLEMVTPVDLAMTSMRPS 550
LGI C R PKWL A V + S LSL ++TSLW V+ EMV VD M SMRPS
Sbjct: 376 LGIRCIRXSPKWLYAIVTRIFTSGV*LSL*PINITSLW*VK*LFEMVIAVDPMMASMRPS 197
Query: 549 WQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGESRT 436
QL++E WS+ + P +PSPS+ V P GES T
Sbjct: 196 AQLDKETWSTQM*LPPNIEIPSPSQMVLHP*CVGESLT 83
>gb|CO199504.1|CO199504 GEO2_1_E01.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_1_E01_A032 5', mRNA sequence
Length = 821
Score = 248 bits (535), Expect = 8e-065
Identities = 103/187 (55%), Positives = 126/187 (67%)
Frame = +2 / -1
Query: 536 LSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLV 715
LSNC DGLID I ST +TISN + T+HN+VML SD + D M++T+A+NHFG GL+
Sbjct: 821 LSNCADGLIDAIMGSTAITISNSYFTHHNEVMLMGHSDSYTPDVNMRVTIAYNHFGEGLI 642
Query: 716 QRMPRCRWGFFHVVNNDYTHWLMYAIGGSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPE 895
QRMPRCR G+FHVVNNDYTHW MYAIGGS PTI SQGNR+ AP N AK+VTK+
Sbjct: 641 QRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFSAPANPFAKEVTKRVYGDV 462
Query: 896 SVWKNWVWHSENDLFMEGAYFTVTGGQINRQFNKKDLIKPRNGSYVTRLTRYAGSLACTP 1075
WKNW W S+ DL + GAYFT +G + + K + R S V LT+ AG L C
Sbjct: 461 EEWKNWNWRSKGDLMLNGAYFTPSGAGASSAYVKAASLPARPSSLVGPLTQTAGVLFCRK 282
Query: 1076 GKPC*IK 1096
G C*++
Sbjct: 281 GVRC*LE 261
Score = 133 bits (284), Expect = 4e-030
Identities = 72/144 (50%), Positives = 84/144 (58%)
Frame = -2 / +1
Query: 969 PVTVK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPM 790
P VK AP RS + QFFH+ + VT FA GA P L++VG LPP+
Sbjct: 388 PDGVKYAPFSIRSPFDLQFQFFHSSTSPYTRFVTSFAKGFAGAENLFP*LLIVGFALPPI 567
Query: 789 AYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLV 610
AY+SQ V*SL TTWK P HLGI C RP PKWL A V + S LSL ++TSLW V
Sbjct: 568 AYISQ*V*SLFTTWKYPCLHLGIRCIRPSPKWLYAIVTRIFTSGV*LSL*PINITSLW*V 747
Query: 609 RWQLEMVTPVDLAMTSMRPSWQLE 538
+ EMV VD M SMRPS QL+
Sbjct: 748 K*LFEMVIAVDPMMASMRPSAQLD 819
>gb|DR023301.1|DR023301 STRS1_56_E08.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_56_E08_A034 5', mRNA sequence
Length = 717
Score = 247 bits (533), Expect = 2e-064
Identities = 98/182 (53%), Positives = 126/182 (69%)
Frame = +2 / -3
Query: 551 DGLIDVIAKSTGVTISNCHLTNHNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPR 730
DGLID + ST +TISN + T+HN VML SD H D++MQ TVA NHFG GLVQRMPR
Sbjct: 715 DGLIDAVKASTYITISNNYFTHHNKVMLLGHSDDHHHDKVMQATVALNHFGEGLVQRMPR 536
Query: 731 CRWGFFHVVNNDYTHWLMYAIGGSKAPTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKN 910
CR+G+FHV NNDYT W MYAIGGS PTI+SQGNR++A N K+VTK+ ++ ES WK
Sbjct: 535 CRFGYFHVFNNDYTEWGMYAIGGSSNPTILSQGNRFMASGNPMVKEVTKRQNSAESEWKK 356
Query: 911 WVWHSENDLFMEGAYFTVTGGQINRQFNKKDLIKPRNGSYVTRLTRYAGSLACTPGKPC* 1090
W W SE+D + GAYFT +G Q+ + +P++ + V +TR AG L+C G C*
Sbjct: 355 WNWISEDDALLNGAYFTPSGSQVLSTYTAAYSARPKSSAVVEEITRNAGVLSCKKGTRC* 176
Query: 1091 IK 1096
++
Sbjct: 175 LQ 170
Score = 140 bits (300), Expect = 2e-032
Identities = 73/140 (52%), Positives = 80/140 (57%)
Frame = -2 / +3
Query: 969 PVTVK*APSMKRSFSECHTQFFHTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPM 790
P VK AP S S+ FFH+ S C LVT AM LP L MVG LPPM
Sbjct: 297 PDGVKYAPFSSASSSDIQFHFFHSLSAEFCLLVTSLTMGFPDAMNLLP*LSMVGFELPPM 476
Query: 789 AYMSQCV*SLLTTWKKPQRHLGILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLV 610
AY+ V*SLL TWK P RHLGI CTRP PKWL ATV C+ S SL ++T LW V
Sbjct: 477 AYIPHSV*SLLNTWKYPNRHLGIRCTRPSPKWLSATVACITLS*WWSSL*PNNITLLW*V 656
Query: 609 RWQLEMVTPVDLAMTSMRPS 550
+ LEMV VD SMRPS
Sbjct: 657 K*LLEMVI*VDALTASMRPS 716
>gb|BQ633895.1|BQ633895 NXRV062_B09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV062_B09 5' similar to Arabidopsis thaliana
sequence At4g24780 pectate lyase like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 657
Score = 140 bits (300), Expect(3) = 2e-064
Identities = 59/98 (60%), Positives = 67/98 (68%)
Frame = +2 / +1
Query: 626 VMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSK 805
VML SD++ +D MQ+TVAFN FG GLVQR+PRCR G+FHVVNNDYTHW MYAIGGS
Sbjct: 358 VMLLGHSDEYMQDVNMQVTVAFNRFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 537
Query: 806 APTIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVW 919
PTI SQ NR+ AP N + TK D E V W
Sbjct: 538 NPTINSQSNRFHAPVNPFSXXXTKHEDALEXVXXXXNW 651
Score = 112 bits (239), Expect(3) = 2e-036
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = -2 / -2
Query: 900 TDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYMSQCV*SLLTTWKKPQRHLGI 721
T S S C V L GA RL WL++VG LPP+AY+SQCV*SL TTWK P RHLG+
Sbjct: 632 TXSSASSCFVXXXEKGLTGAWNRLLWLLIVGFALPPIAYISQCV*SLFTTWK*PCRHLGM 453
Query: 720 LCTRPLPKWLKATVICMIWSSGCLSLELKSMT 625
CT P PK LKATV CM+ S SL +SMT
Sbjct: 452 RCTSPSPKRLKATVTCMLTSCIYSSL*PRSMT 357
Score = 105 bits (223), Expect(3) = 2e-064
Identities = 37/60 (61%), Positives = 48/60 (80%)
Frame = +2 / +2
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTN 616
VRDSP H+GWRT SDGDG+++ G +N+W+DH SLSNC DGLID + ST +TISN +T+
Sbjct: 170 VRDSPGHYGWRTRSDGDGVSIVGGSNIWIDHCSLSNCADGLIDAVLGSTAITISNNFMTH 349
Score = 52.4 bits (108), Expect(3) = 2e-036
Identities = 26/62 (41%), Positives = 32/62 (51%)
Frame = -2 / -1
Query: 621 LWLVRWQLEMVTPVDLAMTSMRPSWQLERERWSSHTLVEPKTVMPSPSETVRQPKWSGES 442
+W V E+V VD SM PS Q ++E+WS L+ P PSPS V P GES
Sbjct: 354 IWCVIKLFEIVIAVDPRTASMSPSAQFDKEQWSIQILLPPTMETPSPSLLVLHP*CPGES 175
Query: 441 RT 436
T
Sbjct: 174 LT 169
Score = 40.9 bits (83), Expect(3) = 2e-064
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 263 IITLKEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
+I L L + KTIDGRG V I NGA +T+Q+
Sbjct: 2 VIQLXXXLFMNSYKTIDGRGANVHIANGACITVQY 106
Score = 27.2 bits (53), Expect(3) = 2e-036
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2 / -1
Query: 369 TNCNVSCAPLVMRTCTPRPSMVL 301
T C V APL + T P PS+VL
Sbjct: 108 TYCTVMQAPLAIWTFAPLPSIVL 40
>gb|BQ699768.1|BQ699768 NXRV128_F12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV128_F12 5' similar to Arabidopsis thaliana
sequence At4g13710 putative pectate lyase A11 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 728
Score = 159 bits (341), Expect(3) = 6e-064
Identities = 66/119 (55%), Positives = 76/119 (63%)
Frame = +2 / +3
Query: 11 GRVDCRATNPIDRCWRCRQDWATDRKRLARCAKGFGRNTTGGLAGKFYXXXXXXXXXXXN 190
G + C NPID CWRC +W DRKRLA CA GFGR+ GG G+ Y N
Sbjct: 9 GYLSCVTGNPIDDCWRCDPNWERDRKRLADCAIGFGRDALGGKHGRLYMVTDPNDYDAVN 188
Query: 191 PRPGTLRWGVIQIEPLWITFAKTMIITLKEELIIRGDKTIDGRGVQVRITNGAQLTLQF 367
PRPGTLR VIQ EPLWI F + M+I LKEELI+ KTIDGRGV V I NG +T+Q+
Sbjct: 189 PRPGTLRHAVIQSEPLWIIFQRDMVIQLKEELIMNSYKTIDGRGVNVHIGNGPCITVQY 365
Score = 70.3 bits (147), Expect(3) = 2e-022
Identities = 34/80 (42%), Positives = 40/80 (50%)
Frame = -2 / -2
Query: 249 KVIHSGSIWMTPHRSVPGRGFXXXXXXXXXXX*NLPASPPVVLRPNPLAHRARRFRSVAQ 70
K+IH GS+ MT R VPG GF NLP PP PNP+A A+RF S +Q
Sbjct: 247 KMIHRGSL*MTA*RRVPGLGFTAS*SLGSVTIYNLPCLPPRASLPNPMAQSAKRFLSRSQ 68
Query: 69 SCRHRQHRSIGFVALQSTRP 10
HRQ S+G Q P
Sbjct: 67 LGSHRQQSSMGLPVTQDR*P 8
Score = 63.4 bits (132), Expect(3) = 6e-064
Identities = 20/29 (68%), Positives = 27/29 (93%)
Frame = +2 / +3
Query: 437 VRDSPDHFGWRTVSDGDGITVFGSTNVWL 523
VRDSP H+GWRT+SDGDGI++FG ++VW+
Sbjct: 429 VRDSPTHYGWRTISDGDGISIFGGSDVWV 515
Score = 62.0 bits (129), Expect(3) = 6e-064
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +2 / +1
Query: 527 HLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFSSSD 649
H+SLSNC GLID I STG+TISN H T+H+ +L +SD
Sbjct: 520 HVSLSNCAXGLIDAIMGSTGITISNSHFTHHDKAILLGASD 642
Score = 48.7 bits (100), Expect(3) = 2e-022
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = -2 / -1
Query: 651 LSLELKSMTSLWLVRWQLEMVTPVDLAMTSMRPSWQLERERW 526
LSL ++ W V+W EMV PVD M SMRP QL+ + W
Sbjct: 644 LSLAPNNIALSW*VKWLFEMVMPVDPMMASMRPXAQLDNDTW 519
Score = 29.9 bits (59), Expect(3) = 2e-022
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2 / -2
Query: 522 SHTLVEPKTVMPSPSETVRQPKWSGESRT 436
+HT + PK +PSPS V P GES T
Sbjct: 514 THTSLPPKMEIPSPSLIVLHP*CVGESLT 428
>gb|BM367381.1|BM367381 NXLV_048_E03_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_048_E03 5' similar to Arabidopsis thaliana
sequence At4g24780 pectate lyase like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 507
Score = 243 bits (524), Expect = 3e-063
Identities = 92/156 (58%), Positives = 114/156 (73%)
Frame = +2 / +3
Query: 503 GSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFSSSDKHPEDQIMQIT 682
G +N+W+DH SLSNC +GLID I ST +TISN +T+H+ VML SD++ +D MQ+T
Sbjct: 18 GGSNIWVDHCSLSNCANGLIDAILGSTAITISNNFMTHHDKVMLLGHSDEYVQDVNMQVT 197
Query: 683 VAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKAPTIISQGNRYIAPPNLAA 862
VAFNHFG GLVQR+PRCR G+FHVVNNDYTHW MYAIGGS PTI SQGNR++ P N +
Sbjct: 198 VAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLXPVNRFS 377
Query: 863 KQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTG 970
K+VT D PE W+ W W S L + G +FT +G
Sbjct: 378 KEVTXHEDAPEXXWRQWNWRSXGXLMLNGXFFTQSG 485
Score = 159 bits (342), Expect = 4e-038
Identities = 72/138 (52%), Positives = 87/138 (63%)
Frame = -2 / -3
Query: 903 HTDSGVSCCLVTCFAARLGGAM*RLPWLMMVGALLPPMAYMSQCV*SLLTTWKKPQRHLG 724
H SG S C VT RL G RLPWL++VG LPP+AY+SQCV*SL TTWK P RHLG
Sbjct: 418 HXLSGASSCXVTSLEKRLTGXRNRLPWLLIVGLALPPIAYISQCV*SLFTTWK*PCRHLG 239
Query: 723 ILCTRPLPKWLKATVICMIWSSGCLSLELKSMTSLWLVRWQLEMVTPVDLAMTSMRPSWQ 544
+ CT P PKWLKATV CM+ S SL +SMT W V E+V VD + SM P Q
Sbjct: 238 MRCTSPSPKWLKATVTCMLTSCTYSSLWPRSMTLSWCVIKLFEIVIAVDPRIASMSPFAQ 59
Query: 543 LERERWSSHTLVEPKTVM 490
++E+ S+ L+ P +M
Sbjct: 58 FDKEQ*STQILLPPPAIM 5
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 452,891,674
Number of Sequences: 355925
Number of extensions: 6216373
Number of successful extensions: 36786
Number of sequences better than 1.0e-020: 200
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 19632938355
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)