TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3185308.2.2
(697 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR019211.1|DR019211 STRS1_28_B06.g1_A034 Shoot tip pitch... 100 6e-037
gb|DR119250.1|DR119250 RTMG1_22_C11.b1_A029 Roots minus mag... 92 1e-034
gb|CV035793.1|CV035793 RTNACL1_42_B01.g1_A029 Roots plus ad... 93 1e-034
gb|DR011201.1|DR011201 HEAT1_4_E06.b1_A029 Root at 37 C for... 92 1e-034
gb|DR119331.1|DR119331 RTMG1_22_C11.g1_A029 Roots minus mag... 92 1e-034
gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds 93 3e-034
gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds 93 3e-034
gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds 93 3e-034
gb|DR095411.1|DR095411 STRR1_20_G09.g1_A033 Stem Response R... 90 6e-034
gb|DR021085.1|DR021085 STRS1_42_F09.b1_A034 Shoot tip pitch... 90 6e-034
gb|DR096360.1|DR096360 STRR1_27_B05.g1_A033 Stem Response R... 90 6e-034
gb|CF668294.1|CF668294 RTCNT1_35_D04.g1_A029 Root control P... 90 6e-034
gb|DR745029.1|DR745029 RTCU1_26_C03.g1_A029 Roots plus adde... 90 6e-034
gb|DR692635.1|DR692635 EST1082723 Normalized pine embryo li... 93 8e-034
gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds 92 1e-033
gb|DR683982.1|DR683982 EST1074058 Normalized pine embryo li... 89 1e-033
gb|DT631935.1|DT631935 EST1146866 Normalized pine embryo li... 89 1e-033
gb|DT625757.1|DT625757 EST1157681 Sequencing ESTs from lobl... 93 1e-033
gb|CN784348.1|CN784348 EST783039 Sequencing ESTs from loblo... 93 1e-033
gb|CF391855.1|CF391855 RTDR3_10_C05.g1_A022 Loblolly pine r... 93 1e-033
gb|CF471926.1|CF471926 RTDS1_7_A08.g1_A015 Drought-stressed... 90 1e-033
gb|CX650764.1|CX650764 COLD1_48_A05.b1_A029 Root cold Pinus... 93 1e-033
gb|DR100574.1|DR100574 STRR1_65_E02.b1_A033 Stem Response R... 87 2e-033
gb|DR163422.1|DR163422 RTFE1_42_G07.g1_A029 Roots minus iro... 87 2e-033
gb|DR113034.1|DR113034 RTS1_32_B12.g1_A029 Roots minus sulf... 87 2e-033
gb|CX652556.1|CX652556 COLD1_59_H02.g1_A029 Root cold Pinus... 87 2e-033
gb|DR098553.1|DR098553 STRR1_46_F12.b1_A033 Stem Response R... 87 2e-033
gb|CX649475.1|CX649475 COLD1_35_B04.g1_A029 Root cold Pinus... 87 2e-033
gb|CX713463.1|CX713463 RTPQ1_9_C04.g1_A032 Roots treated wi... 87 2e-033
gb|CX646780.1|CX646780 COLD1_11_B06.g1_A029 Root cold Pinus... 87 3e-033
gb|DR015281.1|DR015281 STRS1_2_C05.g1_A034 Shoot tip pitch ... 87 3e-033
gb|DR023285.1|DR023285 STRS1_56_D02.g1_A034 Shoot tip pitch... 87 3e-033
gb|DR099166.1|DR099166 STRR1_53_C12.g1_A033 Stem Response R... 87 3e-033
gb|CF668454.1|CF668454 RTCNT1_36_C09.g1_A029 Root control P... 87 3e-033
gb|CO362158.1|CO362158 RTK1_1_E05.g1_A029 Roots minus potas... 87 3e-033
gb|DR070152.1|DR070152 RTDK1_11_D01.g1_A029 Roots, dark Pin... 87 3e-033
gb|DR072178.1|DR072178 RTDK1_24_C09.g1_A029 Roots, dark Pin... 87 3e-033
gb|BX254474.1|BX254474 BX254474 Pinus pinaster differenciat... 87 3e-033
gb|CO200976.1|CO200976 RTCNT2_2_G03.g1_A029 Root control 2 ... 87 3e-033
gb|DR111040.1|DR111040 RTS1_14_G09.g1_A029 Roots minus sulf... 87 3e-033
gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds 89 4e-033
gb|CX649938.1|CX649938 COLD1_42_B01.g1_A029 Root cold Pinus... 86 4e-033
gb|CF479898.1|CF479898 RTWW3_12_H04.g1_A022 Well-watered lo... 86 4e-033
gb|CF476071.1|CF476071 RTWW2_16_D03.g1_A021 Well-watered lo... 86 4e-033
gb|BG275593.1|BG275593 NXSI_143_F09_F NXSI (Nsf Xylem Side ... 87 6e-033
gb|DT636492.1|DT636492 EST1151423 Normalized pine embryo li... 85 8e-033
gb|CF386668.1|CF386668 RTDR1_16_C08.b1_A015 Loblolly pine r... 88 1e-032
gb|DR010861.1|DR010861 HEAT1_1_F12.g1_A029 Root at 37 C for... 92 1e-032
gb|DR093057.1|DR093057 STRR1_5_F06.g1_A033 Stem Response Re... 87 2e-032
gb|CX648930.1|CX648930 COLD1_31_H02.g1_A029 Root cold Pinus... 89 3e-032
gb|CO367410.1|CO367410 RTK1_34_D03.b1_A029 Roots minus pota... 89 3e-032
gb|DR165660.1|DR165660 RTPHOS1_6_B10.g1_A029 Roots minus ph... 89 3e-032
gb|CF668214.1|CF668214 RTCNT1_35_D04.b1_A029 Root control P... 85 3e-032
gb|CO169500.1|CO169500 NDL1_7_B04.g1_A029 Needles control P... 87 4e-032
gb|DT624311.1|DT624311 EST1158586 Sequencing ESTs from lobl... 88 5e-032
gb|DR685073.1|DR685073 EST1075150 Normalized pine embryo li... 88 5e-032
gb|DT624714.1|DT624714 EST1159049 Sequencing ESTs from lobl... 86 5e-032
gb|CO197872.1|CO197872 GEO1_9_E12.g1_A029 Root gravitropism... 86 5e-032
gb|DR010784.1|DR010784 HEAT1_1_F12.b1_A029 Root at 37 C for... 83 5e-032
gb|CF471900.1|CF471900 RTDS1_7_A08.b1_A015 Drought-stressed... 84 5e-032
gb|DR120696.1|DR120696 RTMG1_31_G12.b1_A029 Roots minus mag... 87 9e-032
gb|CX650703.1|CX650703 COLD1_47_B12.g1_A029 Root cold Pinus... 90 9e-032
gb|DR097316.1|DR097316 STRR1_33_H05.g3_A033 Stem Response R... 88 2e-031
gb|DT632413.1|DT632413 EST1147344 Normalized pine embryo li... 86 2e-031
gb|CF386766.1|CF386766 RTDR1_16_C08.g1_A015 Loblolly pine r... 90 2e-031
gb|CF400637.1|CF400637 RTWW1_6_B06.g1_A015 Well-watered lob... 90 2e-031
gb|DR100138.1|DR100138 STRR1_62_B05.b1_A033 Stem Response R... 80 3e-031
gb|DR015200.1|DR015200 STRS1_2_C05.b1_A034 Shoot tip pitch ... 80 3e-031
gb|DR096273.1|DR096273 STRR1_26_H05.g1_A033 Stem Response R... 87 3e-031
gb|DR181356.1|DR181356 RTMNUT1_38_A01.g2_A029 Roots minus m... 86 3e-031
gb|DR102735.1|DR102735 STRR1_83_A06.g1_A033 Stem Response R... 80 3e-031
gb|BF609081.1|BF609081 NXSI_040_B10_F NXSI (Nsf Xylem Side ... 80 3e-031
gb|CO369598.1|CO369598 RTK1_48_F01.b1_A029 Roots minus pota... 87 6e-031
gb|CO368748.1|CO368748 RTK1_42_C07.g1_A029 Roots minus pota... 87 6e-031
gb|CF474408.1|CF474408 RTWW2_20_A09.g1_A021 Well-watered lo... 76 6e-030
gb|AW290718.1|AW290718 NXNV046B02F Nsf Xylem Normal wood Ve... 87 6e-030
gb|CD027376.1|CD027376 NXNV046B02 Nsf Xylem Normal wood Ver... 87 6e-030
gb|DT633920.1|DT633920 EST1148851 Normalized pine embryo li... 105 1e-029
gb|DR050231.1|DR050231 RTBOR1_22_D04.b1_A029 Roots plus add... 79 1e-029
gb|DR180723.1|DR180723 RTMNUT1_34_A06.g1_A029 Roots minus m... 75 3e-029
gb|DR092975.1|DR092975 STRR1_5_F06.b1_A033 Stem Response Re... 75 5e-029
gb|CO367487.1|CO367487 RTK1_34_D03.g1_A029 Roots minus pota... 89 5e-029
gb|CV144435.1|CV144435 EST855644 Sequencing ESTs from loblo... 86 7e-029
gb|CO166169.1|CO166169 FLD1_59_G05.g1_A029 Root flooded Pin... 75 9e-029
gb|DR688987.1|DR688987 EST1079073 Normalized pine embryo li... 93 9e-029
gb|DR055148.1|DR055148 RTCA1_21_G09.g2_A029 Roots minus cal... 87 9e-029
gb|BF186094.1|BF186094 NXCI_132_F04_F NXCI (Nsf Xylem Compr... 76 9e-029
gb|DT632636.1|DT632636 EST1147567 Normalized pine embryo li... 88 1e-028
gb|DR098461.1|DR098461 STRR1_45_E01.g1_A033 Stem Response R... 75 2e-028
gb|DR050310.1|DR050310 RTBOR1_22_D04.g1_A029 Roots plus add... 89 2e-028
gb|CX650634.1|CX650634 COLD1_47_B12.b1_A029 Root cold Pinus... 79 2e-028
gb|DR055518.1|DR055518 RTCA1_24_E10.b1_A029 Roots minus cal... 73 8e-028
gb|BE049743.1|BE049743 NXNV_143_C08_F Nsf Xylem Normal wood... 78 1e-027
gb|DR163235.1|DR163235 RTFE1_41_E12.g1_A029 Roots minus iro... 73 3e-027
gb|CX648594.1|CX648594 COLD1_29_D11.g1_A029 Root cold Pinus... 73 3e-027
gb|DR163745.1|DR163745 RTFE1_44_D12.g1_A029 Roots minus iro... 73 3e-027
gb|DR742067.1|DR742067 RTCU1_1_B09.g1_A029 Roots plus added... 73 3e-027
gb|DR163481.1|DR163481 RTFE1_43_D12.b1_A029 Roots minus iro... 73 3e-027
gb|CO361349.1|CO361349 NDL2_4_G08.b1_A029 Needles control 2... 73 3e-027
gb|DR163147.1|DR163147 RTFE1_41_E12.b1_A029 Roots minus iro... 73 3e-027
gb|DR163657.1|DR163657 RTFE1_44_D12.b1_A029 Roots minus iro... 73 3e-027
gb|DR071475.1|DR071475 RTDK1_20_C09.b1_A029 Roots, dark Pin... 73 3e-027
gb|CO172418.1|CO172418 NDL1_29_D02.g1_A029 Needles control ... 73 3e-027
gb|CF475910.1|CF475910 RTWW2_15_D07.g1_A021 Well-watered lo... 73 3e-027
gb|DR070312.1|DR070312 RTDK1_12_C03.g1_A029 Roots, dark Pin... 86 4e-027
gb|DR093671.1|DR093671 STRR1_9_E07.g1_A033 Stem Response Re... 89 8e-027
gb|CF396870.1|CF396870 RTDS2_24_A10.g1_A021 Drought-stresse... 76 4e-026
gb|CO362167.1|CO362167 RTK1_1_F05.g1_A029 Roots minus potas... 83 7e-026
gb|DR051531.1|DR051531 RTBOR1_30_E09.g1_A029 Roots plus add... 87 9e-026
gb|CO169428.1|CO169428 NDL1_7_B04.b1_A029 Needles control P... 73 2e-025
gb|CO168791.1|CO168791 NDL1_2_C05.g1_A029 Needles control P... 115 4e-025
gb|CV035603.1|CV035603 RTNACL1_41_D10.b1_A029 Roots plus ad... 115 4e-025
gb|CV035673.1|CV035673 RTNACL1_41_D10.g1_A029 Roots plus ad... 115 4e-025
gb|DR071171.1|DR071171 RTDK1_18_C12.b1_A029 Roots, dark Pin... 73 4e-025
gb|DR112973.1|DR112973 RTS1_32_B12.b1_A029 Roots minus sulf... 76 2e-024
gb|DR090297.1|DR090297 RTAL1_14_D02.b1_A029 Roots plus adde... 76 2e-024
gb|DR090465.1|DR090465 RTAL1_15_E12.b1_A029 Roots plus adde... 76 2e-024
gb|DR051834.1|DR051834 RTBOR1_32_E10.g1_A029 Roots plus add... 89 3e-024
gb|DR047687.1|DR047687 RTBOR1_2_F07.g1_A029 Roots plus adde... 75 4e-024
gb|CF400511.1|CF400511 RTWW1_6_B06.b1_A015 Well-watered lob... 69 4e-024
gb|CX649869.1|CX649869 COLD1_42_B01.b1_A029 Root cold Pinus... 75 5e-024
gb|DR090373.1|DR090373 RTAL1_14_D02.g1_A029 Roots plus adde... 87 5e-024
gb|DR011619.1|DR011619 HEAT1_6_G09.g1_A029 Root at 37 C for... 87 7e-024
gb|DR024833.1|DR024833 STRS1_67_F03.g1_A034 Shoot tip pitch... 87 7e-024
gb|CF668487.1|CF668487 RTCNT1_36_F12.g1_A029 Root control P... 87 7e-024
gb|DR024751.1|DR024751 STRS1_67_F03.b1_A034 Shoot tip pitch... 75 1e-023
gb|CR393417.1|CR393417 CR393417 RN Pinus pinaster cDNA clon... 87 1e-023
gb|CO368672.1|CO368672 RTK1_42_C07.b1_A029 Roots minus pota... 67 1e-023
gb|CF399941.1|CF399941 RTWW1_2_C11.b1_A015 Well-watered lob... 71 1e-023
gb|DR015024.1|DR015024 STRS1_1_B12.b1_A034 Shoot tip pitch ... 75 2e-023
gb|DR120161.1|DR120161 RTMG1_27_H07.g2_A029 Roots minus mag... 91 4e-023
gb|CF386013.1|CF386013 RTDR1_7_F11.g1_A015 Loblolly pine ro... 84 7e-023
gb|BQ198383.1|BQ198383 NXLV130_C02_F NXLV (Nsf Xylem Late w... 87 9e-023
gb|DR692432.1|DR692432 EST1082520 Normalized pine embryo li... 76 2e-022
gb|CX649395.1|CX649395 COLD1_35_B04.b1_A029 Root cold Pinus... 76 3e-022
gb|DR080162.1|DR080162 RTFEPL1_20_E11.g1_A029 Roots plus ad... 87 3e-022
gb|BQ107011.1|BQ107011 NXLV085_E06_F NXLV (Nsf Xylem Late w... 76 4e-022
gb|DR021638.1|DR021638 STRS1_46_B05.b1_A034 Shoot tip pitch... 75 6e-022
gb|BG039378.1|BG039378 NXSI_098_D11_F NXSI (Nsf Xylem Side ... 70 6e-022
gb|CF400653.1|CF400653 RTWW1_6_A01.g1_A015 Well-watered lob... 69 2e-021
gb|DR054266.1|DR054266 RTCA1_16_F08.b1_A029 Roots minus cal... 73 4e-021
gb|CF475767.1|CF475767 RTWW2_15_D07.b1_A021 Well-watered lo... 73 4e-021
gb|CF477384.1|CF477384 RTWW3_7_A01.g1_A022 Well-watered lob... 89 7e-021
>gb|DR019211.1|DR019211 STRS1_28_B06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_B06_A034 5', mRNA sequence
Length = 869
Score = 99.6 bits (211), Expect(2) = 6e-037
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = -1 / +1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L FLKIA KAG+VPI YR+V C KGGIR+TI G+ +++ V ++NVGGAGDV
Sbjct: 430 HFDLSQPVFLKIAKYKAGVVPILYRRVPCHKKGGIRFTINGHSYFNLVLISNVGGAGDVH 609
Query: 397 ALWVKGNK 374
+W+KG++
Sbjct: 610 GVWIKGSR 633
Score = 74.8 bits (157), Expect(2) = 6e-037
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = -1 / +1
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
R W PM R+WGQ W + L G+SL+F+V T+D R TS++V +WQFG+T+ +
Sbjct: 631 RTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRSVTSYNVASVNWQFGQTFSGAQFH 810
Query: 193 *G 188
*G
Sbjct: 811 *G 816
>gb|DR119250.1|DR119250 RTMG1_22_C11.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_22_C11_A029 3', mRNA sequence
Length = 773
Score = 91.8 bits (194), Expect(2) = 1e-034
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = -1 / -1
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AF KIA K+GIVPI YR+V C KGGIR+TI G+ +++ V ++NVGGAGDV
Sbjct: 707 QHFDMAEPAFEKIAKYKSGIVPILYRRVPCLRKGGIRFTIAGHSYFNLVLISNVGGAGDV 528
Query: 400 VALWVKGNK 374
A+ +K +K
Sbjct: 527 QAVSIKSSK 501
Score = 74.8 bits (157), Expect(2) = 1e-034
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = -1 / -1
Query: 379 NKRVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
+ + W PM R+WGQ W + L G+SL+F+V T+D R S++ P +WQFG+T+Q ++
Sbjct: 509 SSKTGWQPMSRNWGQNWQSNSLLNGQSLSFKVTTSDGRTTVSYNTAPSNWQFGQTFQGSQ 330
>gb|CV035793.1|CV035793 RTNACL1_42_B01.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_42_B01_A029 5', mRNA sequence
Length = 767
Score = 93.2 bits (197), Expect(2) = 1e-034
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = -1 / -3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + AF KIA K+GIVPI YR+V C KGGIR+TITG+ +++ V ++NVGGAGDV
Sbjct: 765 HFDMAEPAFEKIAKYKSGIVPILYRRVPCLRKGGIRFTITGHSYFNLVLISNVGGAGDVQ 586
Query: 397 ALWVKGNK 374
A+ +K +K
Sbjct: 585 AVSIKSSK 562
Score = 73.5 bits (154), Expect(2) = 1e-034
Identities = 24/60 (40%), Positives = 40/60 (66%)
Frame = -1 / -3
Query: 379 NKRVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
+ + W PM R+WGQ W + L G++L+F+V T+D R S++ P +WQFG+T+Q ++
Sbjct: 570 SSKTGWQPMSRNWGQNWQSNSLLNGQTLSFKVTTSDGRTTVSYNTAPSNWQFGQTFQGSQ 391
>gb|DR011201.1|DR011201 HEAT1_4_E06.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_4_E06_A029 3', mRNA sequence
Length = 752
Score = 91.8 bits (194), Expect(2) = 1e-034
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = -1 / +2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AF KIA K+GIVPI YR+V C KGGIR+TI G+ +++ V ++NVGGAGDV
Sbjct: 38 QHFDMAEPAFEKIAKYKSGIVPILYRRVPCLRKGGIRFTIAGHSYFNLVLISNVGGAGDV 217
Query: 400 VALWVKGNK 374
A+ +K +K
Sbjct: 218 QAVSIKSSK 244
Score = 74.8 bits (157), Expect(2) = 1e-034
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = -1 / +2
Query: 379 NKRVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
+ + W PM R+WGQ W + L G+SL+F+V T+D R S++ P +WQFG+T+Q ++
Sbjct: 236 SSKTGWQPMSRNWGQNWQSNSLLNGQSLSFKVTTSDGRTTVSYNTAPSNWQFGQTFQGSQ 415
>gb|DR119331.1|DR119331 RTMG1_22_C11.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_22_C11_A029 5', mRNA sequence
Length = 753
Score = 91.8 bits (194), Expect(2) = 1e-034
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = -1 / -3
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AF KIA K+GIVPI YR+V C KGGIR+TI G+ +++ V ++NVGGAGDV
Sbjct: 688 QHFDMAEPAFEKIAKYKSGIVPILYRRVPCLRKGGIRFTIAGHSYFNLVLISNVGGAGDV 509
Query: 400 VALWVKGNK 374
A+ +K +K
Sbjct: 508 QAVSIKSSK 482
Score = 74.8 bits (157), Expect(2) = 1e-034
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = -1 / -3
Query: 379 NKRVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
+ + W PM R+WGQ W + L G+SL+F+V T+D R S++ P +WQFG+T+Q ++
Sbjct: 490 SSKTGWQPMSRNWGQNWQSNSLLNGQSLSFKVTTSDGRTTVSYNTAPSNWQFGQTFQGSQ 311
>gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds
Length = 998
Score = 92.7 bits (196), Expect(2) = 3e-034
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = -1 / +3
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AFLKIA + GIVPI Y +V C KGGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 468 QHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNVGGAGDV 647
Query: 400 VALWVKGNK 374
A+ +KG++
Sbjct: 648 HAVSIKGSR 674
Score = 72.5 bits (152), Expect(2) = 3e-034
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -1 / +3
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
R W PM R+WGQ W + L G+SL+F+V T+D R S +V P +WQFG+T++ ++
Sbjct: 672 RSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 845
>gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds
Length = 919
Score = 92.7 bits (196), Expect(2) = 3e-034
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = -1 / +2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AFLKIA + GIVPI Y +V C KGGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 317 QHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNVGGAGDV 496
Query: 400 VALWVKGNK 374
A+ +KG++
Sbjct: 497 HAVSIKGSR 523
Score = 72.5 bits (152), Expect(2) = 3e-034
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -1 / +2
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
R W PM R+WGQ W + L G+SL+F+V T+D R S +V P +WQFG+T++ ++
Sbjct: 521 RSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 694
>gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds
Length = 891
Score = 92.7 bits (196), Expect(2) = 3e-034
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = -1 / +2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AFLKIA + GIVPI Y +V C KGGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 317 QHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNVGGAGDV 496
Query: 400 VALWVKGNK 374
A+ +KG++
Sbjct: 497 NAVSIKGSR 523
Score = 72.5 bits (152), Expect(2) = 3e-034
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -1 / +2
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
R W PM R+WGQ W + L G+SL+F+V T+D R S +V P +WQFG+T++ ++
Sbjct: 521 RSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 694
>gb|DR095411.1|DR095411 STRR1_20_G09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_20_G09_A033 5', mRNA sequence
Length = 853
Score = 90.4 bits (191), Expect(2) = 6e-034
Identities = 34/68 (50%), Positives = 51/68 (75%)
Frame = -1 / +1
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AF ++A ++GIVPI +R+V C KGG+R+TI GN +++ V +TNVGGAGDV
Sbjct: 421 QHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDV 600
Query: 400 VALWVKGN 377
A+ +KG+
Sbjct: 601 EAVSIKGS 624
Score = 73.9 bits (155), Expect(2) = 6e-034
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 209
W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+T++
Sbjct: 634 WQPMSRNWGQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFE 789
>gb|DR021085.1|DR021085 STRS1_42_F09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_42_F09_A034 3', mRNA sequence
Length = 848
Score = 90.4 bits (191), Expect(2) = 6e-034
Identities = 34/68 (50%), Positives = 51/68 (75%)
Frame = -1 / -3
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AF ++A ++GIVPI +R+V C KGG+R+TI GN +++ V +TNVGGAGDV
Sbjct: 411 QHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDV 232
Query: 400 VALWVKGN 377
A+ +KG+
Sbjct: 231 EAVSIKGS 208
Score = 73.9 bits (155), Expect(2) = 6e-034
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = -1 / -3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 209
W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+T++
Sbjct: 198 WQPMSRNWGQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFE 43
>gb|DR096360.1|DR096360 STRR1_27_B05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_27_B05_A033 5', mRNA sequence
Length = 780
Score = 90.4 bits (191), Expect(2) = 6e-034
Identities = 34/68 (50%), Positives = 51/68 (75%)
Frame = -1 / +3
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AF ++A ++GIVPI +R+V C KGG+R+TI GN +++ V +TNVGGAGDV
Sbjct: 225 QHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDV 404
Query: 400 VALWVKGN 377
A+ +KG+
Sbjct: 405 EAVSIKGS 428
Score = 73.9 bits (155), Expect(2) = 6e-034
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 209
W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+T++
Sbjct: 438 WQPMSRNWGQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFE 593
>gb|CF668294.1|CF668294 RTCNT1_35_D04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_35_D04_A029 5', mRNA sequence
Length = 751
Score = 90.4 bits (191), Expect(2) = 6e-034
Identities = 34/68 (50%), Positives = 51/68 (75%)
Frame = -1 / +1
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AF ++A ++GIVPI +R+V C KGG+R+TI GN +++ V +TNVGGAGDV
Sbjct: 289 QHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDV 468
Query: 400 VALWVKGN 377
A+ +KG+
Sbjct: 469 EAVSIKGS 492
Score = 73.9 bits (155), Expect(2) = 6e-034
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 209
W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+T++
Sbjct: 502 WQPMSRNWGQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFE 657
>gb|DR745029.1|DR745029 RTCU1_26_C03.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_26_C03_A029 5', mRNA sequence
Length = 599
Score = 90.0 bits (190), Expect(2) = 6e-034
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = -1 / +3
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AF +IA K GIVPI +R+V C KGG+R+TI G+ +++ V +TNVGGAGDV
Sbjct: 192 QHFDMAQPAFQQIAIYKGGIVPIMFRRVPCVRKGGVRFTINGHSYFNLVLITNVGGAGDV 371
Query: 400 VALWVKGN 377
A+ +KG+
Sbjct: 372 EAVSIKGS 395
Score = 74.4 bits (156), Expect(2) = 6e-034
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 209
W M R+WGQ W + L G+SL+FRV T+D R TS++V P +WQFG+T++
Sbjct: 405 WQEMSRNWGQNWQSNSYLNGQSLSFRVTTSDGRTVTSYNVAPTNWQFGQTFE 560
>gb|DR692635.1|DR692635 EST1082723 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADO50 3' end, mRNA sequence
Length = 902
Score = 93.2 bits (197), Expect(2) = 8e-034
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = -1 / +2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
EHF L F IA +AGIVP+ YR+V C KGGIR+TI G+ +++ V +TNVGGAGDV
Sbjct: 428 EHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNVGGAGDV 607
Query: 400 VALWVKGNK 374
A+ VKG K
Sbjct: 608 EAVSVKGAK 634
Score = 70.7 bits (148), Expect(2) = 8e-034
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W PM R+WGQ W + L G+SL+F+V T+D + TS++V +WQFG+T+ +
Sbjct: 641 WQPMSRNWGQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTFAGNR 805
>gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds
Length = 923
Score = 91.8 bits (194), Expect(2) = 1e-033
Identities = 36/68 (52%), Positives = 50/68 (73%)
Frame = -1 / +2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AFLKIA + GIVPI Y +V C KGGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 317 QHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNVGGAGDV 496
Query: 400 VALWVKGN 377
A+ +KG+
Sbjct: 497 HAVSIKGS 520
Score = 71.6 bits (150), Expect(2) = 1e-033
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W PM R+WGQ W + L G+SL+F+V T+D R S +V P +WQFG+T++ ++
Sbjct: 530 WQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTIVSNNVAPSNWQFGQTFEGSQ 694
>gb|DR683982.1|DR683982 EST1074058 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAN59 3' end, mRNA sequence
Length = 876
Score = 89.0 bits (188), Expect(2) = 1e-033
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + AF KIA K+GIVPI YR+V C KGGIR+TI G +++ V ++NVGGAGDV
Sbjct: 197 HFDMAEPAFEKIAKYKSGIVPILYRRVPCLRKGGIRFTINGLPYFNLVLISNVGGAGDVQ 376
Query: 397 ALWVKGN 377
A+ +KG+
Sbjct: 377 AVSIKGS 397
Score = 74.4 bits (156), Expect(2) = 1e-033
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W PM R+WGQ W + L G+SL+F+V T+D R S++ P +WQFG+T+Q ++
Sbjct: 407 WQPMSRNWGQNWQSNSFLNGQSLSFKVTTSDGRTIVSYNAAPSNWQFGQTFQGSQ 571
>gb|DT631935.1|DT631935 EST1146866 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFE52 3' end, mRNA sequence
Length = 858
Score = 89.0 bits (188), Expect(2) = 1e-033
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = -1 / +1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + AF KIA K+GIVPI YR+V C KGGIR+TI G +++ V ++NVGGAGDV
Sbjct: 205 HFDMAEPAFEKIAKYKSGIVPILYRRVPCLRKGGIRFTINGLPYFNLVLISNVGGAGDVQ 384
Query: 397 ALWVKGN 377
A+ +KG+
Sbjct: 385 AVSIKGS 405
Score = 74.4 bits (156), Expect(2) = 1e-033
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W PM R+WGQ W + L G+SL+F+V T+D R S++ P +WQFG+T+Q ++
Sbjct: 415 WQPMSRNWGQNWQSNSFLNGQSLSFKVTTSDGRTIVSYNAAPSNWQFGQTFQGSQ 579
>gb|DT625757.1|DT625757 EST1157681 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA338 5' end, mRNA sequence
Length = 817
Score = 93.2 bits (197), Expect(2) = 1e-033
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = -1 / +2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
EHF L F IA +AGIVP+ YR+V C KGGIR+TI G+ +++ V +TNVGGAGDV
Sbjct: 371 EHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNVGGAGDV 550
Query: 400 VALWVKGNK 374
A+ VKG K
Sbjct: 551 EAVSVKGAK 577
Score = 70.3 bits (147), Expect(2) = 1e-033
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W PM R+WGQ W + L G+SL+F+V T+D + TS++V +WQFG+T+
Sbjct: 584 WQPMSRNWGQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTF 736
>gb|CN784348.1|CN784348 EST783039 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAK45 5' end, mRNA sequence
Length = 778
Score = 93.2 bits (197), Expect(2) = 1e-033
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = -1 / +2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
EHF L F IA +AGIVP+ YR+V C KGGIR+TI G+ +++ V +TNVGGAGDV
Sbjct: 371 EHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNVGGAGDV 550
Query: 400 VALWVKGNK 374
A+ VKG K
Sbjct: 551 EAVSVKGAK 577
Score = 70.3 bits (147), Expect(2) = 1e-033
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W PM R+WGQ W + L G+SL+F+V T+D + TS++V +WQFG+T+
Sbjct: 584 WQPMSRNWGQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTF 736
>gb|CF391855.1|CF391855 RTDR3_10_C05.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_C05_A022 5', mRNA
sequence
Length = 765
Score = 93.2 bits (197), Expect(2) = 1e-033
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = -1 / +2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
EHF L F IA +AGIVP+ YR+V C KGGIR+TI G+ +++ V +TNVGGAGDV
Sbjct: 392 EHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNVGGAGDV 571
Query: 400 VALWVKGNK 374
A+ VKG K
Sbjct: 572 EAVSVKGAK 598
Score = 70.3 bits (147), Expect(2) = 1e-033
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W PM R+WGQ W + L G+SL+F+V T+D + TS++V +WQFG+T+
Sbjct: 605 WQPMSRNWGQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTF 757
>gb|CF471926.1|CF471926 RTDS1_7_A08.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_7_A08_A015 5', mRNA sequence
Length = 751
Score = 89.5 bits (189), Expect(2) = 1e-033
Identities = 34/68 (50%), Positives = 50/68 (73%)
Frame = -1 / +3
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AF + A ++GIVPI +R+V C KGG+R+TI GN +++ V +TNVGGAGDV
Sbjct: 336 QHFDMAQPAFQQFAIYRSGIVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDV 515
Query: 400 VALWVKGN 377
A+ +KG+
Sbjct: 516 EAVSIKGS 539
Score = 73.9 bits (155), Expect(2) = 1e-033
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 209
W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+T++
Sbjct: 549 WQPMSRNWGQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFE 704
>gb|CX650764.1|CX650764 COLD1_48_A05.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_48_A05_A029 3', mRNA sequence
Length = 650
Score = 93.2 bits (197), Expect(2) = 1e-033
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = -1 / -2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
EHF L F IA +AGIVP+ YR+V C KGGIR+TI G+ +++ V +TNVGGAGDV
Sbjct: 607 EHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNVGGAGDV 428
Query: 400 VALWVKGNK 374
A+ VKG K
Sbjct: 427 EAVSVKGAK 401
Score = 70.3 bits (147), Expect(2) = 1e-033
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / -2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W PM R+WGQ W + L G+SL+F+V T+D + TS++V +WQFG+T+
Sbjct: 394 WQPMSRNWGQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTF 242
>gb|DR100574.1|DR100574 STRR1_65_E02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_65_E02_A033 3', mRNA sequence
Length = 896
Score = 86.8 bits (183), Expect(2) = 2e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 7 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 186
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 187 RVSVKGSQ 210
Score = 75.8 bits (159), Expect(2) = 2e-033
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FRV +D R +TSW++ P +W+FG+T+
Sbjct: 217 WIPLSRNWGQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTF 369
>gb|DR163422.1|DR163422 RTFE1_42_G07.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_42_G07_A029 5', mRNA sequence
Length = 870
Score = 86.8 bits (183), Expect(2) = 2e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 128 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 307
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 308 RVSVKGSQ 331
Score = 75.8 bits (159), Expect(2) = 2e-033
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FRV +D R +TSW++ P +W+FG+T+
Sbjct: 338 WIPLSRNWGQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTF 490
>gb|DR113034.1|DR113034 RTS1_32_B12.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_32_B12_A029 5', mRNA sequence
Length = 819
Score = 86.8 bits (183), Expect(2) = 2e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 92 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 271
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 272 RVSVKGSQ 295
Score = 75.8 bits (159), Expect(2) = 2e-033
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FRV +D R +TSW++ P +W+FG+T+
Sbjct: 302 WIPLSRNWGQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTF 454
>gb|CX652556.1|CX652556 COLD1_59_H02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_59_H02_A029 5', mRNA sequence
Length = 699
Score = 86.8 bits (183), Expect(2) = 2e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 242 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 421
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 422 RVSVKGSQ 445
Score = 75.8 bits (159), Expect(2) = 2e-033
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FRV +D R +TSW++ P +W+FG+T+
Sbjct: 452 WIPLSRNWGQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTF 604
>gb|DR098553.1|DR098553 STRR1_46_F12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_46_F12_A033 3', mRNA sequence
Length = 697
Score = 86.8 bits (183), Expect(2) = 2e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / -1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 433 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 254
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 253 RVSVKGSQ 230
Score = 75.8 bits (159), Expect(2) = 2e-033
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / -1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FRV +D R +TSW++ P +W+FG+T+
Sbjct: 223 WIPLSRNWGQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTF 71
>gb|CX649475.1|CX649475 COLD1_35_B04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_35_B04_A029 5', mRNA sequence
Length = 670
Score = 86.8 bits (183), Expect(2) = 2e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 307 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 486
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 487 RVSVKGSQ 510
Score = 75.8 bits (159), Expect(2) = 2e-033
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FRV +D R +TSW++ P +W+FG+T+
Sbjct: 517 WIPLSRNWGQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTF 669
>gb|CX713463.1|CX713463 RTPQ1_9_C04.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_9_C04_A032 5', mRNA sequence
Length = 556
Score = 86.8 bits (183), Expect(2) = 2e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 108 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 287
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 288 RVSVKGSQ 311
Score = 75.8 bits (159), Expect(2) = 2e-033
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FRV +D R +TSW++ P +W+FG+T+
Sbjct: 318 WIPLSRNWGQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTF 470
>gb|CX646780.1|CX646780 COLD1_11_B06.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_11_B06_A029 5', mRNA sequence
Length = 858
Score = 86.8 bits (183), Expect(2) = 3e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 125 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 304
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 305 RVSVKGSQ 328
Score = 75.3 bits (158), Expect(2) = 3e-033
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FR+ +D R +TSW++ P +W+FG+T+
Sbjct: 335 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTF 487
>gb|DR015281.1|DR015281 STRS1_2_C05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_C05_A034 5', mRNA sequence
Length = 848
Score = 86.8 bits (183), Expect(2) = 3e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 449 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 628
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 629 RVSVKGSQ 652
Score = 75.3 bits (158), Expect(2) = 3e-033
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FR+ +D R +TSW++ P +W+FG+T+
Sbjct: 659 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTF 811
>gb|DR023285.1|DR023285 STRS1_56_D02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_56_D02_A034 5', mRNA sequence
Length = 844
Score = 86.8 bits (183), Expect(2) = 3e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 109 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 288
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 289 RVSVKGSQ 312
Score = 75.3 bits (158), Expect(2) = 3e-033
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FR+ +D R +TSW++ P +W+FG+T+
Sbjct: 319 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTF 471
>gb|DR099166.1|DR099166 STRR1_53_C12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_53_C12_A033 5', mRNA sequence
Length = 823
Score = 86.8 bits (183), Expect(2) = 3e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 267 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 446
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 447 RVSVKGSQ 470
Score = 75.3 bits (158), Expect(2) = 3e-033
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FR+ +D R +TSW++ P +W+FG+T+
Sbjct: 477 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTF 629
>gb|CF668454.1|CF668454 RTCNT1_36_C09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_C09_A029 5', mRNA sequence
Length = 795
Score = 86.8 bits (183), Expect(2) = 3e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 89 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 268
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 269 RVSVKGSQ 292
Score = 75.3 bits (158), Expect(2) = 3e-033
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FR+ +D R +TSW++ P +W+FG+T+
Sbjct: 299 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTF 451
>gb|CO362158.1|CO362158 RTK1_1_E05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_1_E05_A029 5', mRNA sequence
Length = 764
Score = 86.8 bits (183), Expect(2) = 3e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 229 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 408
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 409 RVSVKGSQ 432
Score = 75.3 bits (158), Expect(2) = 3e-033
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FR+ +D R +TSW++ P +W+FG+T+
Sbjct: 439 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTF 591
>gb|DR070152.1|DR070152 RTDK1_11_D01.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_11_D01_A029 5', mRNA sequence
Length = 748
Score = 86.8 bits (183), Expect(2) = 3e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 284 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 463
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 464 RVSVKGSQ 487
Score = 75.3 bits (158), Expect(2) = 3e-033
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FR+ +D R +TSW++ P +W+FG+T+
Sbjct: 494 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTF 646
>gb|DR072178.1|DR072178 RTDK1_24_C09.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_24_C09_A029 5', mRNA sequence
Length = 721
Score = 86.8 bits (183), Expect(2) = 3e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 164 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 343
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 344 RVSVKGSQ 367
Score = 75.3 bits (158), Expect(2) = 3e-033
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FR+ +D R +TSW++ P +W+FG+T+
Sbjct: 374 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTF 526
>gb|BX254474.1|BX254474 BX254474 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP099A09 similar to POLLEN ALLERGEN, mRNA
sequence
Length = 697
Score = 86.8 bits (183), Expect(2) = 3e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 179 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 358
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 359 RVSVKGSQ 382
Score = 75.3 bits (158), Expect(2) = 3e-033
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FR+ +D R +TSW++ P +W+FG+T+
Sbjct: 389 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTF 541
>gb|CO200976.1|CO200976 RTCNT2_2_G03.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_2_G03_A029 5', mRNA sequence
Length = 676
Score = 86.8 bits (183), Expect(2) = 3e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 179 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 358
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 359 RVSVKGSQ 382
Score = 75.3 bits (158), Expect(2) = 3e-033
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FR+ +D R +TSW++ P +W+FG+T+
Sbjct: 389 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTF 541
>gb|DR111040.1|DR111040 RTS1_14_G09.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_14_G09_A029 5', mRNA sequence
Length = 632
Score = 86.8 bits (183), Expect(2) = 3e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 93 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 272
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 273 RVSVKGSQ 296
Score = 75.3 bits (158), Expect(2) = 3e-033
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FR+ +D R +TSW++ P +W+FG+T+
Sbjct: 303 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTF 455
>gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds
Length = 923
Score = 89.0 bits (188), Expect(2) = 4e-033
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = -1 / +2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AFLKIA + GIVPI Y +V C KGGIR+T+ G+ ++ V +TNVGGAGDV
Sbjct: 317 QHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTVNGHSCFNLVLITNVGGAGDV 496
Query: 400 VALWVKG 380
A+ +KG
Sbjct: 497 HAVSIKG 517
Score = 72.5 bits (152), Expect(2) = 4e-033
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -1 / +2
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
R W PM R+WGQ W + L G+SL+F+V T+D R S +V P +WQFG+T++ ++
Sbjct: 521 RSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 694
>gb|CX649938.1|CX649938 COLD1_42_B01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_42_B01_A029 5', mRNA sequence
Length = 862
Score = 86.3 bits (182), Expect(2) = 4e-033
Identities = 33/69 (47%), Positives = 49/69 (71%)
Frame = -1 / +1
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF L F IA +AGIVP+ Y++V C GGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 436 QHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTVNGHSYFNLVLITNVGGAGDV 615
Query: 400 VALWVKGNK 374
A+ +KG++
Sbjct: 616 HAVSIKGSR 642
Score = 75.3 bits (158), Expect(2) = 4e-033
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = -1 / +1
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
R W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+T+
Sbjct: 640 RTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVTSYNAAPSNWQFGQTF 801
>gb|CF479898.1|CF479898 RTWW3_12_H04.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_12_H04_A022 5', mRNA sequence
Length = 734
Score = 86.3 bits (182), Expect(2) = 4e-033
Identities = 33/69 (47%), Positives = 49/69 (71%)
Frame = -1 / +2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF L F IA +AGIVP+ Y++V C GGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 170 QHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTVNGHSYFNLVLITNVGGAGDV 349
Query: 400 VALWVKGNK 374
A+ +KG++
Sbjct: 350 HAVSIKGSR 376
Score = 75.3 bits (158), Expect(2) = 4e-033
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = -1 / +2
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
R W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+T+
Sbjct: 374 RTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVTSYNAAPSNWQFGQTF 535
>gb|CF476071.1|CF476071 RTWW2_16_D03.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_16_D03_A021 5', mRNA sequence
Length = 725
Score = 86.3 bits (182), Expect(2) = 4e-033
Identities = 33/69 (47%), Positives = 49/69 (71%)
Frame = -1 / +2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF L F IA +AGIVP+ Y++V C GGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 203 QHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTVNGHSYFNLVLITNVGGAGDV 382
Query: 400 VALWVKGNK 374
A+ +KG++
Sbjct: 383 HAVSIKGSR 409
Score = 75.3 bits (158), Expect(2) = 4e-033
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = -1 / +2
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
R W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+T+
Sbjct: 407 RTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVTSYNAAPSNWQFGQTF 568
>gb|BG275593.1|BG275593 NXSI_143_F09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_143_F09 5' similar to Arabidopsis thaliana
sequence At2g39700 putative expansin see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 527
Score = 86.8 bits (183), Expect(2) = 6e-033
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 67 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 246
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 247 RVSVKGSQ 270
Score = 74.4 bits (156), Expect(2) = 6e-033
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FR+ +D R +TSW++ P +W+FG T+
Sbjct: 277 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGXTF 429
>gb|DT636492.1|DT636492 EST1151423 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGS45 3' end, mRNA sequence
Length = 833
Score = 84.9 bits (179), Expect(2) = 8e-033
Identities = 32/68 (47%), Positives = 50/68 (73%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 294 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 473
Query: 397 ALWVKGNK 374
+ KG++
Sbjct: 474 RVSAKGSQ 497
Score = 75.8 bits (159), Expect(2) = 8e-033
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FRV +D R +TSW++ P +W+FG+T+
Sbjct: 504 WIPLSRNWGQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTF 656
>gb|CF386668.1|CF386668 RTDR1_16_C08.b1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_16_C08_A015 3', mRNA
sequence
Length = 596
Score = 88.1 bits (186), Expect(2) = 1e-032
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + + AF +IA KAGIVP+ YR+V C GGIR+TI GN+++ + +TNVGG GDV
Sbjct: 3 HFDMAMPAFEQIAIWKAGIVPVQYRRVRCAKGGGIRFTIHGNRYFYLILITNVGGDGDVA 182
Query: 397 ALWVKGN 377
+ VKG+
Sbjct: 183 EVMVKGS 203
Score = 72.1 bits (151), Expect(2) = 1e-032
Identities = 23/55 (41%), Positives = 38/55 (69%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W P+ R+WGQ W + +L G++L+F+V ++ TS++V P DWQFG+T+Q +
Sbjct: 213 WLPLTRNWGQNWQSNTNLQGQALSFQVSSSSGHTITSYNVAPSDWQFGQTFQGNQ 377
>gb|DR010861.1|DR010861 HEAT1_1_F12.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_1_F12_A029 5', mRNA sequence
Length = 733
Score = 91.8 bits (194), Expect(2) = 1e-032
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = -1 / +2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AF KIA K+GIVPI YR+V C KGGIR+TI G+ +++ V ++NVGGAGDV
Sbjct: 374 QHFDMAEPAFEKIAKYKSGIVPILYRRVPCLRKGGIRFTIAGHSYFNLVLISNVGGAGDV 553
Query: 400 VALWVKGNK 374
A+ +K +K
Sbjct: 554 QAVSIKSSK 580
Score = 68.0 bits (142), Expect(2) = 1e-032
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = -1 / +2
Query: 379 NKRVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGK 218
+ + W PM R+WGQ W + L G+SL+F+V T+D R S++ P +WQFG+
Sbjct: 572 SSKTGWQPMSRNWGQNWQSNSLLNGQSLSFKVTTSDGRTTVSYNTAPSNWQFGQ 733
>gb|DR093057.1|DR093057 STRR1_5_F06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_F06_A033 5', mRNA sequence
Length = 884
Score = 86.8 bits (183), Expect(2) = 2e-032
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FLK+A +AGIVP+ +R+V C +GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 432 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 611
Query: 397 ALWVKGNK 374
+ VKG++
Sbjct: 612 RVSVKGSQ 635
Score = 72.5 bits (152), Expect(2) = 2e-032
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W P+ R+WGQ W L G+SL+FR+ +D R + SW++ P +W+FG+T+
Sbjct: 642 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSISWNIVPPNWEFGQTF 794
>gb|CX648930.1|CX648930 COLD1_31_H02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_31_H02_A029 5', mRNA sequence
Length = 857
Score = 88.6 bits (187), Expect(2) = 3e-032
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = -1 / +1
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + AF KIA ++GIVPI +R++ C +GG+R+TI G+ +++ V +TNVGGAGDV
Sbjct: 460 QHFDMAQPAFQKIAIYRSGIVPIMFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDV 639
Query: 400 VALWVKGN 377
A+ +KG+
Sbjct: 640 EAVSIKGS 663
Score = 70.3 bits (147), Expect(2) = 3e-032
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W M R+WGQ W + L G++L+F+V T+D R TS++V P +WQFG+T++ +
Sbjct: 673 WQTMSRNWGQNWQSNSYLNGQTLSFQVSTSDGRIITSYNVAPANWQFGQTFEGVQ 837
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 258,131,247
Number of Sequences: 355925
Number of extensions: 3287829
Number of successful extensions: 29597
Number of sequences better than 1.0e-020: 159
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 9651258455
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)