TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3185308.2.1
(1019 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR019211.1|DR019211 STRS1_28_B06.g1_A034 Shoot tip pitch... 109 8e-056
gb|DR692635.1|DR692635 EST1082723 Normalized pine embryo li... 105 2e-054
gb|DT625757.1|DT625757 EST1157681 Sequencing ESTs from lobl... 105 3e-054
gb|CN784348.1|CN784348 EST783039 Sequencing ESTs from loblo... 105 3e-054
gb|CF391855.1|CF391855 RTDR3_10_C05.g1_A022 Loblolly pine r... 105 3e-054
gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds 102 4e-053
gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds 102 4e-053
gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds 102 5e-053
gb|DR095411.1|DR095411 STRR1_20_G09.g1_A033 Stem Response R... 99 5e-053
gb|DR021085.1|DR021085 STRS1_42_F09.b1_A034 Shoot tip pitch... 99 5e-053
gb|CX649938.1|CX649938 COLD1_42_B01.g1_A029 Root cold Pinus... 97 1e-052
gb|CF471926.1|CF471926 RTDS1_7_A08.g1_A015 Drought-stressed... 98 1e-052
gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds 101 1e-052
gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds 99 9e-052
gb|CX648930.1|CX648930 COLD1_31_H02.g1_A029 Root cold Pinus... 97 9e-052
gb|DT624714.1|DT624714 EST1159049 Sequencing ESTs from lobl... 94 9e-052
gb|CO169500.1|CO169500 NDL1_7_B04.g1_A029 Needles control P... 95 9e-052
gb|DR010861.1|DR010861 HEAT1_1_F12.g1_A029 Root at 37 C for... 101 9e-052
gb|DT624311.1|DT624311 EST1158586 Sequencing ESTs from lobl... 96 1e-051
gb|CO197872.1|CO197872 GEO1_9_E12.g1_A029 Root gravitropism... 97 1e-051
gb|CF668294.1|CF668294 RTCNT1_35_D04.g1_A029 Root control P... 99 1e-051
gb|DR120696.1|DR120696 RTMG1_31_G12.b1_A029 Roots minus mag... 95 3e-051
gb|DR685073.1|DR685073 EST1075150 Normalized pine embryo li... 97 3e-051
gb|DT632413.1|DT632413 EST1147344 Normalized pine embryo li... 95 7e-051
gb|DR181356.1|DR181356 RTMNUT1_38_A01.g2_A029 Roots minus m... 97 7e-051
gb|DR688987.1|DR688987 EST1079073 Normalized pine embryo li... 105 2e-049
gb|DR015281.1|DR015281 STRS1_2_C05.g1_A034 Shoot tip pitch ... 98 8e-049
gb|CV144435.1|CV144435 EST855644 Sequencing ESTs from loblo... 94 1e-048
gb|CO367410.1|CO367410 RTK1_34_D03.b1_A029 Roots minus pota... 97 1e-048
gb|CO367487.1|CO367487 RTK1_34_D03.g1_A029 Roots minus pota... 97 1e-048
gb|DR180723.1|DR180723 RTMNUT1_34_A06.g1_A029 Roots minus m... 75 1e-048
gb|DR093057.1|DR093057 STRR1_5_F06.g1_A033 Stem Response Re... 98 2e-048
gb|DT632636.1|DT632636 EST1147567 Normalized pine embryo li... 97 5e-048
gb|DR050310.1|DR050310 RTBOR1_22_D04.g1_A029 Roots plus add... 97 7e-048
gb|CX650703.1|CX650703 COLD1_47_B12.g1_A029 Root cold Pinus... 100 2e-047
gb|DR096273.1|DR096273 STRR1_26_H05.g1_A033 Stem Response R... 98 2e-047
gb|CF386766.1|CF386766 RTDR1_16_C08.g1_A015 Loblolly pine r... 97 2e-047
gb|CF400637.1|CF400637 RTWW1_6_B06.g1_A015 Well-watered lob... 97 2e-047
gb|DR070312.1|DR070312 RTDK1_12_C03.g1_A029 Roots, dark Pin... 97 8e-047
gb|DR097316.1|DR097316 STRR1_33_H05.g3_A033 Stem Response R... 95 8e-047
gb|CX649475.1|CX649475 COLD1_35_B04.g1_A029 Root cold Pinus... 98 1e-046
gb|CO368748.1|CO368748 RTK1_42_C07.g1_A029 Roots minus pota... 95 1e-046
gb|DT633920.1|DT633920 EST1148851 Normalized pine embryo li... 114 2e-046
gb|DR093671.1|DR093671 STRR1_9_E07.g1_A033 Stem Response Re... 97 2e-046
gb|DR096360.1|DR096360 STRR1_27_B05.g1_A033 Stem Response R... 99 3e-046
gb|CF476071.1|CF476071 RTWW2_16_D03.g1_A021 Well-watered lo... 97 2e-045
gb|DR683982.1|DR683982 EST1074058 Normalized pine embryo li... 99 2e-045
gb|DT631935.1|DT631935 EST1146866 Normalized pine embryo li... 99 2e-045
gb|DR055148.1|DR055148 RTCA1_21_G09.g2_A029 Roots minus cal... 98 4e-045
gb|DR070152.1|DR070152 RTDK1_11_D01.g1_A029 Roots, dark Pin... 98 8e-045
gb|CX652556.1|CX652556 COLD1_59_H02.g1_A029 Root cold Pinus... 98 1e-044
gb|DR099166.1|DR099166 STRR1_53_C12.g1_A033 Stem Response R... 98 1e-044
gb|DR745029.1|DR745029 RTCU1_26_C03.g1_A029 Roots plus adde... 98 2e-044
gb|DT636492.1|DT636492 EST1151423 Normalized pine embryo li... 96 3e-044
gb|DR051834.1|DR051834 RTBOR1_32_E10.g1_A029 Roots plus add... 97 7e-044
gb|CO369598.1|CO369598 RTK1_48_F01.b1_A029 Roots minus pota... 94 1e-043
gb|DR098553.1|DR098553 STRR1_46_F12.b1_A033 Stem Response R... 98 5e-043
gb|DR120161.1|DR120161 RTMG1_27_H07.g2_A029 Roots minus mag... 100 6e-043
gb|DR051531.1|DR051531 RTBOR1_30_E09.g1_A029 Roots plus add... 98 5e-042
gb|CF479898.1|CF479898 RTWW3_12_H04.g1_A022 Well-watered lo... 97 5e-041
gb|CO362158.1|CO362158 RTK1_1_E05.g1_A029 Roots minus potas... 98 5e-041
gb|CF477384.1|CF477384 RTWW3_7_A01.g1_A022 Well-watered lob... 97 1e-040
gb|DR165660.1|DR165660 RTPHOS1_6_B10.g1_A029 Roots minus ph... 97 3e-040
gb|CF668487.1|CF668487 RTCNT1_36_F12.g1_A029 Root control P... 98 3e-040
gb|DR024833.1|DR024833 STRS1_67_F03.g1_A034 Shoot tip pitch... 98 3e-040
gb|DR011619.1|DR011619 HEAT1_6_G09.g1_A029 Root at 37 C for... 98 4e-040
gb|CF386013.1|CF386013 RTDR1_7_F11.g1_A015 Loblolly pine ro... 95 3e-039
gb|DR168497.1|DR168497 RTPHOS1_25_G11.g1_A029 Roots minus p... 97 7e-039
gb|CV035603.1|CV035603 RTNACL1_41_D10.b1_A029 Roots plus ad... 126 9e-039
gb|DR080162.1|DR080162 RTFEPL1_20_E11.g1_A029 Roots plus ad... 98 1e-038
gb|DR072178.1|DR072178 RTDK1_24_C09.g1_A029 Roots, dark Pin... 98 2e-038
gb|CO200976.1|CO200976 RTCNT2_2_G03.g1_A029 Root control 2 ... 98 2e-038
gb|BX254474.1|BX254474 BX254474 Pinus pinaster differenciat... 98 2e-038
gb|CX648594.1|CX648594 COLD1_29_D11.g1_A029 Root cold Pinus... 73 6e-038
gb|DR742067.1|DR742067 RTCU1_1_B09.g1_A029 Roots plus added... 73 6e-038
gb|DR119250.1|DR119250 RTMG1_22_C11.b1_A029 Roots minus mag... 101 3e-037
gb|CV035793.1|CV035793 RTNACL1_42_B01.g1_A029 Roots plus ad... 102 3e-037
gb|DR011201.1|DR011201 HEAT1_4_E06.b1_A029 Root at 37 C for... 101 3e-037
gb|DR119331.1|DR119331 RTMG1_22_C11.g1_A029 Roots minus mag... 101 3e-037
gb|CX650764.1|CX650764 COLD1_48_A05.b1_A029 Root cold Pinus... 105 5e-037
gb|DR692432.1|DR692432 EST1082520 Normalized pine embryo li... 82 7e-037
gb|DR090373.1|DR090373 RTAL1_14_D02.g1_A029 Roots plus adde... 98 8e-037
gb|DR100574.1|DR100574 STRR1_65_E02.b1_A033 Stem Response R... 98 2e-036
gb|DR163422.1|DR163422 RTFE1_42_G07.g1_A029 Roots minus iro... 98 2e-036
gb|DR113034.1|DR113034 RTS1_32_B12.g1_A029 Roots minus sulf... 98 2e-036
gb|CX713463.1|CX713463 RTPQ1_9_C04.g1_A032 Roots treated wi... 98 2e-036
gb|CF391890.1|CF391890 RTDR3_10_G01.g1_A022 Loblolly pine r... 98 2e-036
gb|CX646780.1|CX646780 COLD1_11_B06.g1_A029 Root cold Pinus... 98 2e-036
gb|DR023285.1|DR023285 STRS1_56_D02.g1_A034 Shoot tip pitch... 98 2e-036
gb|CF668454.1|CF668454 RTCNT1_36_C09.g1_A029 Root control P... 98 2e-036
gb|DR111040.1|DR111040 RTS1_14_G09.g1_A029 Roots minus sulf... 98 2e-036
gb|DR687528.1|DR687528 EST1077610 Normalized pine embryo li... 105 5e-036
gb|BG275593.1|BG275593 NXSI_143_F09_F NXSI (Nsf Xylem Side ... 98 5e-036
gb|BM427751.1|BM427751 NXRV_002_G05_F NXRV (Nsf Xylem Root ... 95 1e-035
gb|DR120128.1|DR120128 RTMG1_27_E05.g2_A029 Roots minus mag... 94 3e-035
gb|CF663902.1|CF663902 RTCNT1_5_H12.g1_A029 Root control Pi... 100 1e-034
gb|CF386668.1|CF386668 RTDR1_16_C08.b1_A015 Loblolly pine r... 95 1e-034
gb|CO362167.1|CO362167 RTK1_1_F05.g1_A029 Roots minus potas... 94 6e-034
gb|BF609490.1|BF609490 NXSI_043_C03_F NXSI (Nsf Xylem Side ... 95 9e-034
gb|CF668214.1|CF668214 RTCNT1_35_D04.b1_A029 Root control P... 89 3e-033
gb|DR100138.1|DR100138 STRR1_62_B05.b1_A033 Stem Response R... 87 5e-033
gb|CF471900.1|CF471900 RTDS1_7_A08.b1_A015 Drought-stressed... 88 5e-033
gb|AW290718.1|AW290718 NXNV046B02F Nsf Xylem Normal wood Ve... 98 5e-033
gb|CD027376.1|CD027376 NXNV046B02 Nsf Xylem Normal wood Ver... 98 5e-033
gb|BF609081.1|BF609081 NXSI_040_B10_F NXSI (Nsf Xylem Side ... 86 9e-033
gb|DR089298.1|DR089298 RTAL1_7_G03.g1_A029 Roots plus added... 97 1e-032
gb|CF479851.1|CF479851 RTWW3_12_D07.g1_A022 Well-watered lo... 97 1e-032
gb|CF666895.1|CF666895 RTCNT1_26_G11.g1_A029 Root control P... 91 1e-032
gb|DR010784.1|DR010784 HEAT1_1_F12.b1_A029 Root at 37 C for... 85 2e-032
gb|DR022663.1|DR022663 STRS1_52_D06.g1_A034 Shoot tip pitch... 95 3e-032
gb|CF402042.1|CF402042 RTWW1_16_F09.g1_A015 Well-watered lo... 94 3e-032
gb|DR015200.1|DR015200 STRS1_2_C05.b1_A034 Shoot tip pitch ... 83 6e-032
gb|DR102735.1|DR102735 STRR1_83_A06.g1_A033 Stem Response R... 83 6e-032
gb|DR092307.1|DR092307 RTAL1_28_G05.b1_A029 Roots plus adde... 98 8e-032
gb|CO166169.1|CO166169 FLD1_59_G05.g1_A029 Root flooded Pin... 75 2e-031
gb|DR163235.1|DR163235 RTFE1_41_E12.g1_A029 Roots minus iro... 73 5e-031
gb|BX253271.1|BX253271 BX253271 Pinus pinaster differenciat... 91 6e-031
gb|CF474408.1|CF474408 RTWW2_20_A09.g1_A021 Well-watered lo... 79 1e-030
gb|BE049743.1|BE049743 NXNV_143_C08_F Nsf Xylem Normal wood... 89 1e-030
gb|DR163745.1|DR163745 RTFE1_44_D12.g1_A029 Roots minus iro... 73 1e-030
gb|CO172418.1|CO172418 NDL1_29_D02.g1_A029 Needles control ... 73 1e-030
gb|BX250040.1|BX250040 BX250040 Pinus pinaster differenciat... 80 1e-030
gb|CR393417.1|CR393417 CR393417 RN Pinus pinaster cDNA clon... 98 2e-030
gb|DR055601.1|DR055601 RTCA1_24_E10.g2_A029 Roots minus cal... 82 4e-030
gb|BX251144.1|BX251144 BX251144 Pinus pinaster differenciat... 88 7e-030
gb|DR092975.1|DR092975 STRR1_5_F06.b1_A033 Stem Response Re... 79 9e-030
gb|DR050231.1|DR050231 RTBOR1_22_D04.b1_A029 Roots plus add... 80 1e-029
gb|DR096352.1|DR096352 STRR1_27_A07.g1_A033 Stem Response R... 86 2e-029
gb|CV138360.1|CV138360 EST849569 Sequencing ESTs from loblo... 73 2e-029
gb|DR053875.1|DR053875 RTCA1_13_G12.g1_A029 Roots minus cal... 73 2e-029
gb|CF477424.1|CF477424 RTWW3_7_B01.g1_A022 Well-watered lob... 73 2e-029
gb|CF400653.1|CF400653 RTWW1_6_A01.g1_A015 Well-watered lob... 68 2e-029
gb|DR746394.1|DR746394 RTCU1_36_E04.g1_A029 Roots plus adde... 98 3e-029
gb|DR056635.1|DR056635 RTCA1_31_C07.g1_A029 Roots minus cal... 82 3e-029
gb|CV035673.1|CV035673 RTNACL1_41_D10.g1_A029 Roots plus ad... 126 6e-029
gb|CX650634.1|CX650634 COLD1_47_B12.b1_A029 Root cold Pinus... 81 6e-029
gb|BF186094.1|BF186094 NXCI_132_F04_F NXCI (Nsf Xylem Compr... 76 8e-029
gb|BX251613.1|BX251613 BX251613 Pinus pinaster differenciat... 84 1e-028
gb|BX682844.1|BX682844 BX682844 Pinus pinaster differenciat... 84 1e-028
gb|DR163481.1|DR163481 RTFE1_43_D12.b1_A029 Roots minus iro... 73 1e-028
gb|CO361349.1|CO361349 NDL2_4_G08.b1_A029 Needles control 2... 73 1e-028
gb|DR163147.1|DR163147 RTFE1_41_E12.b1_A029 Roots minus iro... 73 1e-028
gb|CF475910.1|CF475910 RTWW2_15_D07.g1_A021 Well-watered lo... 73 1e-028
gb|DR098461.1|DR098461 STRR1_45_E01.g1_A033 Stem Response R... 75 1e-028
gb|CO171305.1|CO171305 NDL1_20_C09.g1_A029 Needles control ... 91 2e-028
gb|AW011524.1|AW011524 ST21H02 Pine TriplEx shoot tip libra... 94 2e-028
gb|CO168791.1|CO168791 NDL1_2_C05.g1_A029 Needles control P... 126 3e-028
gb|BQ198383.1|BQ198383 NXLV130_C02_F NXLV (Nsf Xylem Late w... 98 6e-028
gb|DR100480.1|DR100480 STRR1_64_A12.g1_A033 Stem Response R... 80 8e-028
gb|BF518096.1|BF518096 NXSI_030_H10_F NXSI (Nsf Xylem Side ... 68 9e-028
gb|CF400025.1|CF400025 RTWW1_2_C11.g1_A015 Well-watered lob... 61 2e-027
gb|DR055518.1|DR055518 RTCA1_24_E10.b1_A029 Roots minus cal... 73 5e-027
gb|BG039378.1|BG039378 NXSI_098_D11_F NXSI (Nsf Xylem Side ... 70 6e-027
gb|DR163657.1|DR163657 RTFE1_44_D12.b1_A029 Roots minus iro... 73 9e-027
gb|DR071475.1|DR071475 RTDK1_20_C09.b1_A029 Roots, dark Pin... 73 9e-027
gb|CF396870.1|CF396870 RTDS2_24_A10.g1_A021 Drought-stresse... 76 3e-026
gb|CO361435.1|CO361435 NDL2_4_G08.g1_A029 Needles control 2... 68 3e-026
gb|CO169428.1|CO169428 NDL1_7_B04.b1_A029 Needles control P... 73 8e-026
gb|DR071171.1|DR071171 RTDK1_18_C12.b1_A029 Roots, dark Pin... 73 2e-025
gb|DR056610.1|DR056610 RTCA1_31_A02.g1_A029 Roots minus cal... 69 1e-024
gb|DR090297.1|DR090297 RTAL1_14_D02.b1_A029 Roots plus adde... 76 1e-024
gb|DR112973.1|DR112973 RTS1_32_B12.b1_A029 Roots minus sulf... 76 1e-024
gb|DR090465.1|DR090465 RTAL1_15_E12.b1_A029 Roots plus adde... 76 2e-024
gb|DR047687.1|DR047687 RTBOR1_2_F07.g1_A029 Roots plus adde... 75 2e-024
gb|CF400511.1|CF400511 RTWW1_6_B06.b1_A015 Well-watered lob... 69 3e-024
gb|DT639052.1|DT639052 EST1153983 Normalized pine embryo li... 68 5e-024
gb|CO368672.1|CO368672 RTK1_42_C07.b1_A029 Roots minus pota... 67 5e-024
gb|CF399941.1|CF399941 RTWW1_2_C11.b1_A015 Well-watered lob... 71 5e-024
gb|DR100599.1|DR100599 STRR1_65_E02.g1_A033 Stem Response R... 95 6e-024
gb|DR024751.1|DR024751 STRS1_67_F03.b1_A034 Shoot tip pitch... 75 9e-024
gb|CX649869.1|CX649869 COLD1_42_B01.b1_A029 Root cold Pinus... 75 9e-024
gb|DR015024.1|DR015024 STRS1_1_B12.b1_A034 Shoot tip pitch ... 75 2e-023
gb|DT637181.1|DT637181 EST1152112 Normalized pine embryo li... 68 7e-023
gb|DR055444.1|DR055444 RTCA1_23_E11.g2_A029 Roots minus cal... 63 3e-022
gb|CX649395.1|CX649395 COLD1_35_B04.b1_A029 Root cold Pinus... 76 3e-022
gb|BQ107011.1|BQ107011 NXLV085_E06_F NXLV (Nsf Xylem Late w... 76 7e-022
gb|DR021638.1|DR021638 STRS1_46_B05.b1_A034 Shoot tip pitch... 75 9e-022
gb|BF778581.1|BF778581 NXSI_088_D02_F NXSI (Nsf Xylem Side ... 88 1e-021
gb|DR054266.1|DR054266 RTCA1_16_F08.b1_A029 Roots minus cal... 73 3e-021
gb|CF475767.1|CF475767 RTWW2_15_D07.b1_A021 Well-watered lo... 73 3e-021
gb|DR168662.1|DR168662 RTPHOS1_27_B09.b1_A029 Roots minus p... 91 4e-021
>gb|DR019211.1|DR019211 STRS1_28_B06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_B06_A034 5', mRNA sequence
Length = 869
Score = 109 bits (233), Expect(5) = 8e-056
Identities = 40/68 (58%), Positives = 56/68 (82%)
Frame = +3 / +1
Query: 426 HFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDVV 605
HFDL+ P FLKIA+ KAG+VPI YR+V C +KGGIR+TI G+ +++ V ++NVGGAGDV
Sbjct: 430 HFDLSQPVFLKIAKYKAGVVPILYRRVPCHKKGGIRFTINGHSYFNLVLISNVGGAGDVH 609
Query: 606 ALWVKGNK 629
+W+KG++
Sbjct: 610 GVWIKGSR 633
Score = 74.8 bits (157), Expect(5) = 8e-056
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +3 / +1
Query: 630 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 809
R W PM R+WGQ W + L G+SL+F+V T+D R TS++V +WQFG+T+ +
Sbjct: 631 RTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRSVTSYNVASVNWQFGQTFSGAQFH 810
Query: 810 *G 815
*G
Sbjct: 811 *G 816
Score = 52.4 bits (108), Expect(5) = 8e-056
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +3 / +1
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYEL 350
T SGACGY + YG TAA+ +L+ NG CGAC+++
Sbjct: 211 TMSGACGYGNLYSQGYGANTAALSTALFNNGLSCGACFQV 330
Score = 29.0 bits (57), Expect(5) = 8e-056
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3 / +1
Query: 168 AEPWTDGHATYYGGRD 215
A W HAT+YGG D
Sbjct: 154 ASSWISAHATFYGGSD 201
Score = 26.7 bits (52), Expect(5) = 8e-056
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3 / +1
Query: 360 KGTVVVTATNEAPP 401
+G+VVVTATN PP
Sbjct: 361 RGSVVVTATNFCPP 402
>gb|DR692635.1|DR692635 EST1082723 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADO50 3' end, mRNA sequence
Length = 902
Score = 105 bits (223), Expect(5) = 2e-054
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
EHFDL+ P F IA+ +AGIVP+ YR+V C+RKGGIR+TI G+ +++ V +TNVGGAGDV
Sbjct: 428 EHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNVGGAGDV 607
Query: 603 VALWVKGNK 629
A+ VKG K
Sbjct: 608 EAVSVKGAK 634
Score = 70.7 bits (148), Expect(5) = 2e-054
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +3 / +2
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 803
W PM R+WGQ W + L G+SL+F+V T+D + TS++V +WQFG+T+ +
Sbjct: 641 WQPMSRNWGQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTFAGNR 805
Score = 56.5 bits (117), Expect(5) = 2e-054
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACYE++
Sbjct: 188 TMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQ 310
Score = 29.9 bits (59), Expect(5) = 2e-054
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 177 WTDGHATYYGGRD 215
WT HAT+YGG D
Sbjct: 140 WTSAHATFYGGGD 178
Score = 25.4 bits (49), Expect(5) = 2e-054
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
G++VVTATN PP
Sbjct: 341 GSIVVTATNFCPP 379
>gb|DT625757.1|DT625757 EST1157681 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA338 5' end, mRNA sequence
Length = 817
Score = 105 bits (223), Expect(5) = 3e-054
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
EHFDL+ P F IA+ +AGIVP+ YR+V C+RKGGIR+TI G+ +++ V +TNVGGAGDV
Sbjct: 371 EHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNVGGAGDV 550
Query: 603 VALWVKGNK 629
A+ VKG K
Sbjct: 551 EAVSVKGAK 577
Score = 70.3 bits (147), Expect(5) = 3e-054
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +3 / +2
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 791
W PM R+WGQ W + L G+SL+F+V T+D + TS++V +WQFG+T+
Sbjct: 584 WQPMSRNWGQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTF 736
Score = 56.5 bits (117), Expect(5) = 3e-054
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACYE++
Sbjct: 131 TMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQ 253
Score = 29.9 bits (59), Expect(5) = 3e-054
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 177 WTDGHATYYGGRD 215
WT HAT+YGG D
Sbjct: 83 WTSAHATFYGGGD 121
Score = 25.4 bits (49), Expect(5) = 3e-054
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
G++VVTATN PP
Sbjct: 284 GSIVVTATNFCPP 322
>gb|CN784348.1|CN784348 EST783039 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAK45 5' end, mRNA sequence
Length = 778
Score = 105 bits (223), Expect(5) = 3e-054
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
EHFDL+ P F IA+ +AGIVP+ YR+V C+RKGGIR+TI G+ +++ V +TNVGGAGDV
Sbjct: 371 EHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNVGGAGDV 550
Query: 603 VALWVKGNK 629
A+ VKG K
Sbjct: 551 EAVSVKGAK 577
Score = 70.3 bits (147), Expect(5) = 3e-054
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +3 / +2
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 791
W PM R+WGQ W + L G+SL+F+V T+D + TS++V +WQFG+T+
Sbjct: 584 WQPMSRNWGQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTF 736
Score = 56.5 bits (117), Expect(5) = 3e-054
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACYE++
Sbjct: 131 TMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQ 253
Score = 29.9 bits (59), Expect(5) = 3e-054
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 177 WTDGHATYYGGRD 215
WT HAT+YGG D
Sbjct: 83 WTSAHATFYGGGD 121
Score = 25.4 bits (49), Expect(5) = 3e-054
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
G++VVTATN PP
Sbjct: 284 GSIVVTATNFCPP 322
>gb|CF391855.1|CF391855 RTDR3_10_C05.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_C05_A022 5', mRNA
sequence
Length = 765
Score = 105 bits (223), Expect(5) = 3e-054
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
EHFDL+ P F IA+ +AGIVP+ YR+V C+RKGGIR+TI G+ +++ V +TNVGGAGDV
Sbjct: 392 EHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNVGGAGDV 571
Query: 603 VALWVKGNK 629
A+ VKG K
Sbjct: 572 EAVSVKGAK 598
Score = 70.3 bits (147), Expect(5) = 3e-054
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +3 / +2
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 791
W PM R+WGQ W + L G+SL+F+V T+D + TS++V +WQFG+T+
Sbjct: 605 WQPMSRNWGQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTF 757
Score = 56.5 bits (117), Expect(5) = 3e-054
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACYE++
Sbjct: 152 TMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQ 274
Score = 29.9 bits (59), Expect(5) = 3e-054
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 177 WTDGHATYYGGRD 215
WT HAT+YGG D
Sbjct: 104 WTSAHATFYGGGD 142
Score = 25.4 bits (49), Expect(5) = 3e-054
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
G++VVTATN PP
Sbjct: 305 GSIVVTATNFCPP 343
>gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds
Length = 998
Score = 102 bits (217), Expect(5) = 4e-053
Identities = 39/69 (56%), Positives = 55/69 (79%)
Frame = +3 / +3
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAFLKIA+ + GIVPI Y +V C RKGGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 468 QHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNVGGAGDV 647
Query: 603 VALWVKGNK 629
A+ +KG++
Sbjct: 648 HAVSIKGSR 674
Score = 72.5 bits (152), Expect(5) = 4e-053
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +3 / +3
Query: 630 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 803
R W PM R+WGQ W + L G+SL+F+V T+D R S +V P +WQFG+T++ ++
Sbjct: 672 RSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 845
Score = 55.1 bits (114), Expect(5) = 4e-053
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3 / +3
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ +G CGACYE++
Sbjct: 228 TMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMR 350
Score = 27.6 bits (54), Expect(5) = 4e-053
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +3
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 180 WESAHATFYGGSD 218
Score = 25.8 bits (50), Expect(5) = 4e-053
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 381 GTVTVTATNFCPP 419
>gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds
Length = 919
Score = 102 bits (217), Expect(5) = 4e-053
Identities = 39/69 (56%), Positives = 55/69 (79%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAFLKIA+ + GIVPI Y +V C RKGGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 317 QHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNVGGAGDV 496
Query: 603 VALWVKGNK 629
A+ +KG++
Sbjct: 497 HAVSIKGSR 523
Score = 72.5 bits (152), Expect(5) = 4e-053
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +3 / +2
Query: 630 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 803
R W PM R+WGQ W + L G+SL+F+V T+D R S +V P +WQFG+T++ ++
Sbjct: 521 RSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 694
Score = 55.1 bits (114), Expect(5) = 4e-053
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ +G CGACYE++
Sbjct: 77 TMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMR 199
Score = 27.6 bits (54), Expect(5) = 4e-053
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 29 WESAHATFYGGSD 67
Score = 25.8 bits (50), Expect(5) = 4e-053
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 230 GTVTVTATNFCPP 268
>gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds
Length = 891
Score = 102 bits (217), Expect(5) = 5e-053
Identities = 39/69 (56%), Positives = 55/69 (79%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAFLKIA+ + GIVPI Y +V C RKGGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 317 QHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNVGGAGDV 496
Query: 603 VALWVKGNK 629
A+ +KG++
Sbjct: 497 NAVSIKGSR 523
Score = 72.5 bits (152), Expect(5) = 5e-053
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +3 / +2
Query: 630 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 803
R W PM R+WGQ W + L G+SL+F+V T+D R S +V P +WQFG+T++ ++
Sbjct: 521 RSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 694
Score = 54.7 bits (113), Expect(5) = 5e-053
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ +G CGACYE++
Sbjct: 77 TMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMQ 199
Score = 27.6 bits (54), Expect(5) = 5e-053
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 29 WESAHATFYGGSD 67
Score = 25.8 bits (50), Expect(5) = 5e-053
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 230 GTVTVTATNFCPP 268
>gb|DR095411.1|DR095411 STRR1_20_G09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_20_G09_A033 5', mRNA sequence
Length = 853
Score = 98.7 bits (209), Expect(5) = 5e-053
Identities = 37/68 (54%), Positives = 54/68 (79%)
Frame = +3 / +1
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF ++A ++GIVPI +R+V C RKGG+R+TI GN +++ V +TNVGGAGDV
Sbjct: 421 QHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDV 600
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 601 EAVSIKGS 624
Score = 73.9 bits (155), Expect(5) = 5e-053
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +3 / +1
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 794
W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+T++
Sbjct: 634 WQPMSRNWGQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFE 789
Score = 57.0 bits (118), Expect(5) = 5e-053
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3 / +1
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACY++K
Sbjct: 175 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMK 297
Score = 27.6 bits (54), Expect(5) = 5e-053
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +1
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 127 WQSAHATFYGGSD 165
Score = 25.8 bits (50), Expect(5) = 5e-053
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +1
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 334 GTVTVTATNLCPP 372
>gb|DR021085.1|DR021085 STRS1_42_F09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_42_F09_A034 3', mRNA sequence
Length = 848
Score = 98.7 bits (209), Expect(5) = 5e-053
Identities = 37/68 (54%), Positives = 54/68 (79%)
Frame = +3 / -3
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF ++A ++GIVPI +R+V C RKGG+R+TI GN +++ V +TNVGGAGDV
Sbjct: 411 QHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDV 232
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 231 EAVSIKGS 208
Score = 73.9 bits (155), Expect(5) = 5e-053
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +3 / -3
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 794
W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+T++
Sbjct: 198 WQPMSRNWGQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFE 43
Score = 57.0 bits (118), Expect(5) = 5e-053
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3 / -3
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACY++K
Sbjct: 657 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMK 535
Score = 27.6 bits (54), Expect(5) = 5e-053
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / -3
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 705 WQSAHATFYGGSD 667
Score = 25.8 bits (50), Expect(5) = 5e-053
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / -3
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 498 GTVTVTATNLCPP 460
>gb|CX649938.1|CX649938 COLD1_42_B01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_42_B01_A029 5', mRNA sequence
Length = 862
Score = 97.3 bits (206), Expect(5) = 1e-052
Identities = 36/69 (52%), Positives = 54/69 (78%)
Frame = +3 / +1
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFDL+ P F IA+ +AGIVP+ Y++V C R GGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 436 QHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTVNGHSYFNLVLITNVGGAGDV 615
Query: 603 VALWVKGNK 629
A+ +KG++
Sbjct: 616 HAVSIKGSR 642
Score = 75.3 bits (158), Expect(5) = 1e-052
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +3 / +1
Query: 630 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 791
R W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+T+
Sbjct: 640 RTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVTSYNAAPSNWQFGQTF 801
Score = 53.3 bits (110), Expect(5) = 1e-052
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +3 / +1
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGAC+ ++
Sbjct: 196 TMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIR 318
Score = 31.3 bits (62), Expect(5) = 1e-052
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / +1
Query: 168 AEPWTDGHATYYGGRD 215
A WT+ HAT+YGG D
Sbjct: 139 AHGWTNAHATFYGGGD 186
Score = 24.9 bits (48), Expect(5) = 1e-052
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +1
Query: 363 GTVVVTATNEAPP 401
G +VVTATN PP
Sbjct: 349 GAIVVTATNFCPP 387
>gb|CF471926.1|CF471926 RTDS1_7_A08.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_7_A08_A015 5', mRNA sequence
Length = 751
Score = 97.7 bits (207), Expect(5) = 1e-052
Identities = 37/68 (54%), Positives = 53/68 (77%)
Frame = +3 / +3
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF + A ++GIVPI +R+V C RKGG+R+TI GN +++ V +TNVGGAGDV
Sbjct: 336 QHFDMAQPAFQQFAIYRSGIVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDV 515
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 516 EAVSIKGS 539
Score = 73.9 bits (155), Expect(5) = 1e-052
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +3 / +3
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 794
W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+T++
Sbjct: 549 WQPMSRNWGQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFE 704
Score = 57.0 bits (118), Expect(5) = 1e-052
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3 / +3
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACY++K
Sbjct: 90 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMK 212
Score = 27.6 bits (54), Expect(5) = 1e-052
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +3
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 42 WQSAHATFYGGSD 80
Score = 25.8 bits (50), Expect(5) = 1e-052
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 249 GTVTVTATNLCPP 287
>gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds
Length = 923
Score = 101 bits (215), Expect(5) = 1e-052
Identities = 39/68 (57%), Positives = 54/68 (79%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAFLKIA+ + GIVPI Y +V C RKGGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 317 QHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNVGGAGDV 496
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 497 HAVSIKGS 520
Score = 71.6 bits (150), Expect(5) = 1e-052
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +3 / +2
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 803
W PM R+WGQ W + L G+SL+F+V T+D R S +V P +WQFG+T++ ++
Sbjct: 530 WQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTIVSNNVAPSNWQFGQTFEGSQ 694
Score = 55.1 bits (114), Expect(5) = 1e-052
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ +G CGACYE++
Sbjct: 77 TMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMR 199
Score = 27.6 bits (54), Expect(5) = 1e-052
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 29 WESAHATFYGGSD 67
Score = 25.8 bits (50), Expect(5) = 1e-052
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 230 GTVTVTATNFCPP 268
>gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds
Length = 923
Score = 98.7 bits (209), Expect(5) = 9e-052
Identities = 39/67 (58%), Positives = 52/67 (77%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAFLKIA+ + GIVPI Y +V C RKGGIR+T+ G+ ++ V +TNVGGAGDV
Sbjct: 317 QHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTVNGHSCFNLVLITNVGGAGDV 496
Query: 603 VALWVKG 623
A+ +KG
Sbjct: 497 HAVSIKG 517
Score = 72.5 bits (152), Expect(5) = 9e-052
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +3 / +2
Query: 630 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 803
R W PM R+WGQ W + L G+SL+F+V T+D R S +V P +WQFG+T++ ++
Sbjct: 521 RSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 694
Score = 54.7 bits (113), Expect(5) = 9e-052
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ +G CGACYE++
Sbjct: 77 TMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMQ 199
Score = 27.6 bits (54), Expect(5) = 9e-052
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 29 WESAHATFYGGSD 67
Score = 25.4 bits (49), Expect(5) = 9e-052
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
GTV +TATN PP
Sbjct: 230 GTVTITATNFCPP 268
>gb|CX648930.1|CX648930 COLD1_31_H02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_31_H02_A029 5', mRNA sequence
Length = 857
Score = 96.8 bits (205), Expect(5) = 9e-052
Identities = 36/68 (52%), Positives = 54/68 (79%)
Frame = +3 / +1
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF KIA ++GIVPI +R++ C R+GG+R+TI G+ +++ V +TNVGGAGDV
Sbjct: 460 QHFDMAQPAFQKIAIYRSGIVPIMFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDV 639
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 640 EAVSIKGS 663
Score = 70.3 bits (147), Expect(5) = 9e-052
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +3 / +1
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 803
W M R+WGQ W + L G++L+F+V T+D R TS++V P +WQFG+T++ +
Sbjct: 673 WQTMSRNWGQNWQSNSYLNGQTLSFQVSTSDGRIITSYNVAPANWQFGQTFEGVQ 837
Score = 58.3 bits (121), Expect(5) = 9e-052
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3 / +1
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACYE+K
Sbjct: 214 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMK 336
Score = 27.6 bits (54), Expect(5) = 9e-052
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +1
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 166 WQSAHATFYGGSD 204
Score = 25.8 bits (50), Expect(5) = 9e-052
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +1
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 373 GTVTVTATNLCPP 411
>gb|DT624714.1|DT624714 EST1159049 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAI31 5' end, mRNA sequence
Length = 844
Score = 94.1 bits (199), Expect(5) = 9e-052
Identities = 36/68 (52%), Positives = 52/68 (76%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF I ++GIVPI +R+V C RKGG+R+TI G+ +++ V +TNVGGAGDV
Sbjct: 419 QHFDMAQPAFQHIPIYRSGIVPIMFRRVPCVRKGGVRFTINGHSYFNLVLITNVGGAGDV 598
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 599 EAVSIKGS 622
Score = 72.1 bits (151), Expect(5) = 9e-052
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +3 / +2
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 794
W M R+WGQ W + L G+SL+F+V T+D R TS++V P +WQFG+T++
Sbjct: 632 WQAMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSYNVAPANWQFGQTFE 787
Score = 59.3 bits (123), Expect(5) = 9e-052
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACYE+K
Sbjct: 173 TMGGACGYGNLYSQGYGTNTAALSTALFNNGASCGACYEMK 295
Score = 27.6 bits (54), Expect(5) = 9e-052
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 125 WQSAHATFYGGSD 163
Score = 25.8 bits (50), Expect(5) = 9e-052
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 332 GTVTVTATNLCPP 370
>gb|CO169500.1|CO169500 NDL1_7_B04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_B04_A029 5', mRNA sequence
Length = 810
Score = 95.0 bits (201), Expect(5) = 9e-052
Identities = 37/68 (54%), Positives = 52/68 (76%)
Frame = +3 / +1
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAFL+IA K GIVPI +R+V C RKGG+R+TI G+ +++ V +TNV AGDV
Sbjct: 445 QHFDMAQPAFLQIAIYKGGIVPIMFRRVPCVRKGGVRFTINGHSYFNLVLITNVADAGDV 624
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 625 EAVSIKGS 648
Score = 71.6 bits (150), Expect(5) = 9e-052
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +3 / +1
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 791
W M R+WGQ W + L G+SL+FRV ++D R TS++V P +WQFG+T+
Sbjct: 658 WQEMSRNWGQNWQSNSYLNGQSLSFRVTSSDGRTVTSYNVAPANWQFGQTF 810
Score = 57.9 bits (120), Expect(5) = 9e-052
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3 / +1
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACYE+K
Sbjct: 199 TMGGACGYGNLYSQGYGTNTAALSTALFNNGLTCGACYEMK 321
Score = 27.6 bits (54), Expect(5) = 9e-052
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +1
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 151 WQSAHATFYGGSD 189
Score = 26.7 bits (52), Expect(5) = 9e-052
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 360 KGTVVVTATNEAPP 401
+GTV VTATN PP
Sbjct: 355 RGTVTVTATNFCPP 396
>gb|DR010861.1|DR010861 HEAT1_1_F12.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_1_F12_A029 5', mRNA sequence
Length = 733
Score = 101 bits (215), Expect(5) = 9e-052
Identities = 40/69 (57%), Positives = 55/69 (79%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF KIA+ K+GIVPI YR+V C RKGGIR+TI G+ +++ V ++NVGGAGDV
Sbjct: 374 QHFDMAEPAFEKIAKYKSGIVPILYRRVPCLRKGGIRFTIAGHSYFNLVLISNVGGAGDV 553
Query: 603 VALWVKGNK 629
A+ +K +K
Sbjct: 554 QAVSIKSSK 580
Score = 68.0 bits (142), Expect(5) = 9e-052
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +3 / +2
Query: 624 NKRVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGK 785
+ + W PM R+WGQ W + L G+SL+F+V T+D R S++ P +WQFG+
Sbjct: 572 SSKTGWQPMSRNWGQNWQSNSLLNGQSLSFKVTTSDGRTTVSYNTAPSNWQFGQ 733
Score = 57.9 bits (120), Expect(5) = 9e-052
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACYE+K
Sbjct: 134 TMGGACGYGNLYSQGYGTDTAALSTALFNNGFSCGACYEMK 256
Score = 27.6 bits (54), Expect(5) = 9e-052
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 86 WESAHATFYGGSD 124
Score = 24.0 bits (46), Expect(5) = 9e-052
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
GTV +TATN PP
Sbjct: 287 GTVRITATNFCPP 325
>gb|DT624311.1|DT624311 EST1158586 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAD27 5' end, mRNA sequence
Length = 886
Score = 96.4 bits (204), Expect(5) = 1e-051
Identities = 37/68 (54%), Positives = 53/68 (77%)
Frame = +3 / +3
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF IA ++GIVPI +R+V C RKGG+R+TI G+ +++ V +TNVGGAGDV
Sbjct: 438 QHFDMAQPAFQHIAIYRSGIVPIMFRRVPCVRKGGVRFTINGHSYFNLVLITNVGGAGDV 617
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 618 EAVSIKGS 641
Score = 69.8 bits (146), Expect(5) = 1e-051
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = +3 / +3
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 794
W M R+WGQ W + L G++L+F+V T+D R TS++V P +WQFG+T++
Sbjct: 651 WQAMSRNWGQNWQSNSYLNGQTLSFQVTTSDGRIITSYNVAPANWQFGQTFE 806
Score = 58.8 bits (122), Expect(5) = 1e-051
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +3 / +3
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG+ CGACYE+K
Sbjct: 192 TMGGACGYGNLYSQGYGTNTAALSTALFNNGSTCGACYEMK 314
Score = 27.6 bits (54), Expect(5) = 1e-051
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +3
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 144 WQSAHATFYGGSD 182
Score = 25.8 bits (50), Expect(5) = 1e-051
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 351 GTVTVTATNLCPP 389
>gb|CO197872.1|CO197872 GEO1_9_E12.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_9_E12_A029 5', mRNA sequence
Length = 812
Score = 97.3 bits (206), Expect(5) = 1e-051
Identities = 36/69 (52%), Positives = 54/69 (78%)
Frame = +3 / +3
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFDL+ P F IA+ +AGIVP+ Y++V C R GGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 453 QHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTVNGHSYFNLVLITNVGGAGDV 632
Query: 603 VALWVKGNK 629
A+ +KG++
Sbjct: 633 HAVSIKGSR 659
Score = 71.6 bits (150), Expect(5) = 1e-051
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = +3 / +3
Query: 630 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGK 785
R W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+
Sbjct: 657 RTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVTSYNAAPSNWQFGQ 812
Score = 53.3 bits (110), Expect(5) = 1e-051
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +3 / +3
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGAC+ ++
Sbjct: 213 TMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIR 335
Score = 31.3 bits (62), Expect(5) = 1e-051
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / +3
Query: 168 AEPWTDGHATYYGGRD 215
A WT+ HAT+YGG D
Sbjct: 156 AHGWTNAHATFYGGGD 203
Score = 24.9 bits (48), Expect(5) = 1e-051
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 363 GTVVVTATNEAPP 401
G +VVTATN PP
Sbjct: 366 GAIVVTATNFCPP 404
>gb|CF668294.1|CF668294 RTCNT1_35_D04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_35_D04_A029 5', mRNA sequence
Length = 751
Score = 98.7 bits (209), Expect(5) = 1e-051
Identities = 37/68 (54%), Positives = 54/68 (79%)
Frame = +3 / +1
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF ++A ++GIVPI +R+V C RKGG+R+TI GN +++ V +TNVGGAGDV
Sbjct: 289 QHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDV 468
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 469 EAVSIKGS 492
Score = 73.9 bits (155), Expect(5) = 1e-051
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +3 / +1
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 794
W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+T++
Sbjct: 502 WQPMSRNWGQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFE 657
Score = 57.0 bits (118), Expect(5) = 1e-051
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3 / +1
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACY++K
Sbjct: 43 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMK 165
Score = 25.8 bits (50), Expect(5) = 1e-051
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +1
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 202 GTVTVTATNLCPP 240
Score = 23.1 bits (44), Expect(5) = 1e-051
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3 / +1
Query: 189 HATYYGGRD 215
HAT+YGG D
Sbjct: 7 HATFYGGSD 33
>gb|DR120696.1|DR120696 RTMG1_31_G12.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_31_G12_A029 3', mRNA sequence
Length = 865
Score = 95.0 bits (201), Expect(5) = 3e-051
Identities = 35/68 (51%), Positives = 54/68 (79%)
Frame = +3 / -1
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF +IA ++GIVPI +R++ C R+GG+R+TI G+ +++ V +TNVGGAGDV
Sbjct: 400 QHFDMAQPAFQQIAIYRSGIVPIMFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDV 221
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 220 EAVSIKGS 197
Score = 70.3 bits (147), Expect(5) = 3e-051
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +3 / -1
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 803
W M R+WGQ W + L G++L+F+V T+D R TS++V P +WQFG+T++ +
Sbjct: 187 WQTMSRNWGQNWQSNSYLNGQTLSFQVSTSDGRIITSYNVAPANWQFGQTFEGVQ 23
Score = 58.3 bits (121), Expect(5) = 3e-051
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3 / -1
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACYE+K
Sbjct: 646 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMK 524
Score = 27.6 bits (54), Expect(5) = 3e-051
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / -1
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 694 WQSAHATFYGGSD 656
Score = 25.8 bits (50), Expect(5) = 3e-051
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / -1
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 487 GTVTVTATNLCPP 449
>gb|DR685073.1|DR685073 EST1075150 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAZ77 3' end, mRNA sequence
Length = 848
Score = 96.8 bits (205), Expect(5) = 3e-051
Identities = 37/68 (54%), Positives = 53/68 (77%)
Frame = +3 / +3
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF IA ++GIVPI +R+V C RKGG+R+TI G+ +++ V +TNVGGAGDV
Sbjct: 483 QHFDMAQPAFQHIATYRSGIVPIIFRRVPCVRKGGVRFTINGHPYFNLVLITNVGGAGDV 662
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 663 EAVSIKGS 686
Score = 69.8 bits (146), Expect(5) = 3e-051
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +3 / +3
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 791
W M R+WGQ W + L G++L+F+V T+D R TS++V P +WQFG+T+
Sbjct: 696 WQAMSRNWGQNWQSNSYLNGQALSFQVTTSDGRTITSYNVAPANWQFGQTF 848
Score = 57.0 bits (118), Expect(5) = 3e-051
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3 / +3
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACY++K
Sbjct: 237 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMK 359
Score = 27.6 bits (54), Expect(5) = 3e-051
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +3
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 189 WQSAHATFYGGSD 227
Score = 25.8 bits (50), Expect(5) = 3e-051
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 396 GTVTVTATNLCPP 434
>gb|DT632413.1|DT632413 EST1147344 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFJ73 3' end, mRNA sequence
Length = 826
Score = 95.5 bits (202), Expect(5) = 7e-051
Identities = 39/67 (58%), Positives = 52/67 (77%)
Frame = +3 / +3
Query: 426 HFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDVV 605
HFD+ PAF KIA+ K+GIVPI YR+V C RKGGIR+TI G +++ V ++NVGGAG V
Sbjct: 465 HFDMAEPAFEKIAKYKSGIVPILYRRVLCLRKGGIRFTINGLPYFNLVLISNVGGAGGVQ 644
Query: 606 ALWVKGN 626
A+ +KG+
Sbjct: 645 AVSIKGS 665
Score = 69.8 bits (146), Expect(5) = 7e-051
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +3 / +3
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKT 788
W PM R+WGQ W + L G+SL+F+V T+D R S++ P +WQFG+T
Sbjct: 675 WQPMSRNWGQNWQSNSFLNGQSLSFKVTTSDGRTIVSYNAAPSNWQFGQT 824
Score = 58.3 bits (121), Expect(5) = 7e-051
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3 / +3
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACYE+K
Sbjct: 222 TMGGACGYGNLYSQGYGTDTAALSTALFNNGLSCGACYEMK 344
Score = 28.1 bits (55), Expect(5) = 7e-051
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 177 WTDGHATYYGGRD 215
W GHAT+YGG D
Sbjct: 174 WEFGHATFYGGID 212
Score = 24.0 bits (46), Expect(5) = 7e-051
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 363 GTVVVTATNEAPP 401
G+V VTATN PP
Sbjct: 375 GSVTVTATNFCPP 413
>gb|DR181356.1|DR181356 RTMNUT1_38_A01.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_38_A01_A029 5', mRNA sequence
Length = 765
Score = 97.3 bits (206), Expect(5) = 7e-051
Identities = 36/69 (52%), Positives = 54/69 (78%)
Frame = +3 / +1
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFDL+ P F IA+ +AGIVP+ Y++V C R GGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 412 QHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTVNGHSYFNLVLITNVGGAGDV 591
Query: 603 VALWVKGNK 629
A+ +KG++
Sbjct: 592 HAVSIKGSR 618
Score = 68.9 bits (144), Expect(5) = 7e-051
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +3 / +1
Query: 630 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQF 779
R W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQF
Sbjct: 616 RTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVTSYNAAPNNWQF 765
Score = 53.3 bits (110), Expect(5) = 7e-051
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +3 / +1
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGAC+ ++
Sbjct: 172 TMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIR 294
Score = 31.3 bits (62), Expect(5) = 7e-051
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / +1
Query: 168 AEPWTDGHATYYGGRD 215
A WT+ HAT+YGG D
Sbjct: 115 AHGWTNAHATFYGGGD 162
Score = 24.9 bits (48), Expect(5) = 7e-051
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +1
Query: 363 GTVVVTATNEAPP 401
G +VVTATN PP
Sbjct: 325 GAIVVTATNFCPP 363
>gb|DR688987.1|DR688987 EST1079073 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACC87 3' end, mRNA sequence
Length = 772
Score = 105 bits (223), Expect(5) = 2e-049
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
EHFDL+ P F IA+ +AGIVP+ YR+V C+RKGGIR+TI G+ +++ V +TNVGGAGDV
Sbjct: 425 EHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNVGGAGDV 604
Query: 603 VALWVKGNK 629
A+ VKG K
Sbjct: 605 EAVSVKGAK 631
Score = 56.5 bits (117), Expect(5) = 2e-049
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACYE++
Sbjct: 185 TMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQ 307
Score = 53.8 bits (111), Expect(5) = 2e-049
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +3 / +2
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHV 758
W PM R+WGQ W + L G+SL+F+V T+D + TS++V
Sbjct: 638 WQPMSRNWGQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNV 757
Score = 29.9 bits (59), Expect(5) = 2e-049
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 177 WTDGHATYYGGRD 215
WT HAT+YGG D
Sbjct: 137 WTSAHATFYGGGD 175
Score = 25.4 bits (49), Expect(5) = 2e-049
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
G++VVTATN PP
Sbjct: 338 GSIVVTATNFCPP 376
>gb|DR015281.1|DR015281 STRS1_2_C05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_C05_A034 5', mRNA sequence
Length = 848
Score = 97.7 bits (207), Expect(4) = 8e-049
Identities = 36/68 (52%), Positives = 56/68 (82%)
Frame = +3 / +2
Query: 426 HFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDVV 605
HFDL++P FLK+AE +AGIVP+ +R+V C ++GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 449 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 628
Query: 606 ALWVKGNK 629
+ VKG++
Sbjct: 629 RVSVKGSQ 652
Score = 75.3 bits (158), Expect(4) = 8e-049
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = +3 / +2
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 791
W P+ R+WGQ W L G+SL+FR+ +D R +TSW++ P +W+FG+T+
Sbjct: 659 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTF 811
Score = 51.0 bits (105), Expect(4) = 8e-049
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YG +AA+ +L+ +G CGAC+E+K
Sbjct: 200 TMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIK 322
Score = 32.7 bits (65), Expect(4) = 8e-049
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3 / +2
Query: 156 GKFKAEPWTDGHATYYGGRD 215
G + PW + HAT+YGG D
Sbjct: 131 GVYFPGPWNEAHATFYGGSD 190
>gb|CV144435.1|CV144435 EST855644 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPID557 5' end, mRNA sequence
Length = 769
Score = 94.1 bits (199), Expect(5) = 1e-048
Identities = 36/68 (52%), Positives = 52/68 (76%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF I ++GIVPI +R+V C RKGG+R+TI G+ +++ V +TNVGGAGDV
Sbjct: 419 QHFDMAQPAFQHIPIYRSGIVPIMFRRVPCVRKGGVRFTINGHSYFNLVLITNVGGAGDV 598
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 599 EAVSIKGS 622
Score = 61.6 bits (128), Expect(5) = 1e-048
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +3 / +2
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQ 776
W M R+WGQ W + L G+SL+F+V T+D R TS++V P +WQ
Sbjct: 632 WQAMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSYNVAPANWQ 769
Score = 59.3 bits (123), Expect(5) = 1e-048
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACYE+K
Sbjct: 173 TMGGACGYGNLYSQGYGTNTAALSTALFNNGASCGACYEMK 295
Score = 27.6 bits (54), Expect(5) = 1e-048
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 125 WQSAHATFYGGSD 163
Score = 25.8 bits (50), Expect(5) = 1e-048
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 332 GTVTVTATNLCPP 370
>gb|CO367410.1|CO367410 RTK1_34_D03.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_34_D03_A029 3', mRNA sequence
Length = 851
Score = 96.8 bits (205), Expect(4) = 1e-048
Identities = 36/68 (52%), Positives = 54/68 (79%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF KIA ++GIVPI +R++ C R+GG+R+TI G+ +++ V +TNVGGAGDV
Sbjct: 245 QHFDMAQPAFQKIAIYRSGIVPIMFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDV 424
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 425 EAVSIKGS 448
Score = 70.3 bits (147), Expect(4) = 1e-048
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +3 / +2
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 803
W M R+WGQ W + L G++L+F+V T+D R TS++V P +WQFG+T++ +
Sbjct: 458 WQTMSRNWGQNWQSNSYLNGQTLSFQVSTSDGRIITSYNVAPANWQFGQTFEGVQ 622
Score = 57.4 bits (119), Expect(4) = 1e-048
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +3 / +2
Query: 240 GACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
GACGY + YGT TAA+ +L+ NG CGACYE+K
Sbjct: 8 GACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMK 121
Score = 25.8 bits (50), Expect(4) = 1e-048
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 158 GTVTVTATNLCPP 196
>gb|CO367487.1|CO367487 RTK1_34_D03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_34_D03_A029 5', mRNA sequence
Length = 788
Score = 96.8 bits (205), Expect(5) = 1e-048
Identities = 36/68 (52%), Positives = 54/68 (79%)
Frame = +3 / +1
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF KIA ++GIVPI +R++ C R+GG+R+TI G+ +++ V +TNVGGAGDV
Sbjct: 436 QHFDMAQPAFQKIAIYRSGIVPIMFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDV 615
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 616 EAVSIKGS 639
Score = 59.3 bits (123), Expect(5) = 1e-048
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +3 / +1
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQ 776
W M R+WGQ W + L G++L+F+V T+D R TS++V P +WQ
Sbjct: 649 WQTMSRNWGQNWQSNSYLNGQTLSFQVSTSDGRIITSYNVAPANWQ 786
Score = 58.3 bits (121), Expect(5) = 1e-048
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3 / +1
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACYE+K
Sbjct: 190 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMK 312
Score = 27.6 bits (54), Expect(5) = 1e-048
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +1
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 142 WQSAHATFYGGSD 180
Score = 25.8 bits (50), Expect(5) = 1e-048
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +1
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 349 GTVTVTATNLCPP 387
>gb|DR180723.1|DR180723 RTMNUT1_34_A06.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_34_A06_A029 5', mRNA sequence
Length = 773
Score = 74.8 bits (157), Expect(6) = 1e-048
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = +3 / +3
Query: 624 NKRVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 803
+ + W PM R+WGQ W + L G+SL+F+V T+D R S++ P +WQFG+T+Q ++
Sbjct: 582 SSKTGWQPMSRNWGQNWQSNSLLNGQSLSFKVTTSDGRTTVSYNTAPSNWQFGQTFQGSQ 761
Score = 68.0 bits (142), Expect(6) = 1e-048
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +3 / +3
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTI 542
+HFD+ PAF KIA+ K+GIVPI YR++ C RKGGIR+TI
Sbjct: 387 QHFDMAEPAFEKIAKYKSGIVPILYRRIPCLRKGGIRFTI 506
Score = 57.4 bits (119), Expect(6) = 1e-048
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3 / +3
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY+ + YGT T A+ +L+ NG CGACYE+K
Sbjct: 147 TMGGACGYENLYSQGYGTDTVALSTALFNNGFSCGACYEMK 269
Score = 33.1 bits (66), Expect(6) = 1e-048
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +3 / +3
Query: 549 NQHYSEVKVTNVGGAGDVVALWVKGNK 629
+ +++ V ++NVGGAGDV A+ +K +K
Sbjct: 510 HSYFNLVLISNVGGAGDVQAVSIKSSK 590
Score = 27.6 bits (54), Expect(6) = 1e-048
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +3
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 99 WESAHATFYGGSD 137
Score = 24.0 bits (46), Expect(6) = 1e-048
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 363 GTVVVTATNEAPP 401
GTV +TATN PP
Sbjct: 300 GTVRITATNFCPP 338
>gb|DR093057.1|DR093057 STRR1_5_F06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_F06_A033 5', mRNA sequence
Length = 884
Score = 97.7 bits (207), Expect(4) = 2e-048
Identities = 36/68 (52%), Positives = 56/68 (82%)
Frame = +3 / +3
Query: 426 HFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDVV 605
HFDL++P FLK+AE +AGIVP+ +R+V C ++GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 432 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 611
Query: 606 ALWVKGNK 629
+ VKG++
Sbjct: 612 RVSVKGSQ 635
Score = 72.5 bits (152), Expect(4) = 2e-048
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = +3 / +3
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 791
W P+ R+WGQ W L G+SL+FR+ +D R + SW++ P +W+FG+T+
Sbjct: 642 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSISWNIVPPNWEFGQTF 794
Score = 51.0 bits (105), Expect(4) = 2e-048
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3 / +3
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YG +AA+ +L+ +G CGAC+E+K
Sbjct: 183 TMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIK 305
Score = 34.5 bits (69), Expect(4) = 2e-048
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3 / +3
Query: 156 GKFKAEPWTDGHATYYGGRD 215
G ++ PW + HAT+YGG D
Sbjct: 114 GVYQPGPWNEAHATFYGGSD 173
>gb|DT632636.1|DT632636 EST1147567 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFM16 3' end, mRNA sequence
Length = 858
Score = 96.8 bits (205), Expect(6) = 5e-048
Identities = 37/68 (54%), Positives = 53/68 (77%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF IA ++GIVPI +R+V C RKGG+R+TI G+ +++ V +TNVGGAGDV
Sbjct: 491 QHFDMAQPAFQHIATYRSGIVPIIFRRVPCVRKGGVRFTINGHPYFNLVLITNVGGAGDV 670
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 671 EAVSIKGS 694
Score = 57.0 bits (118), Expect(6) = 5e-048
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACY++K
Sbjct: 245 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMK 367
Score = 49.2 bits (101), Expect(6) = 5e-048
Identities = 17/34 (50%), Positives = 27/34 (79%)
Frame = +3 / +3
Query: 690 LTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 791
L G++L+F+V T+D R TS++V P +WQFG+T+
Sbjct: 756 LNGQALSFQVTTSDGRTITSYNVAPANWQFGQTF 857
Score = 27.6 bits (54), Expect(6) = 5e-048
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 197 WQSAHATFYGGSD 235
Score = 26.7 bits (52), Expect(6) = 5e-048
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3 / +2
Query: 639 WTPMKRSWGQLWTTEV 686
W M R+WGQ W ++
Sbjct: 704 WQAMSRNWGQNWAEQL 751
Score = 25.8 bits (50), Expect(6) = 5e-048
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 404 GTVTVTATNLCPP 442
>gb|DR050310.1|DR050310 RTBOR1_22_D04.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_22_D04_A029 5', mRNA sequence
Length = 806
Score = 96.8 bits (205), Expect(5) = 7e-048
Identities = 36/68 (52%), Positives = 54/68 (79%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF KIA ++GIVPI +R++ C R+GG+R+TI G+ +++ V +TNVGGAGDV
Sbjct: 458 QHFDMAQPAFQKIAIYRSGIVPIMFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDV 637
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 638 EAVSIKGS 661
Score = 58.3 bits (121), Expect(5) = 7e-048
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACYE+K
Sbjct: 212 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMK 334
Score = 57.0 bits (118), Expect(5) = 7e-048
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3 / +2
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDW 773
W M R+WGQ W + L G++L+F+V T+D R TS++V P +W
Sbjct: 671 WQTMSRNWGQNWQSNSYLNGQTLSFQVSTSDGRIITSYNVAPANW 805
Score = 27.6 bits (54), Expect(5) = 7e-048
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 164 WQSAHATFYGGSD 202
Score = 25.8 bits (50), Expect(5) = 7e-048
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 371 GTVTVTATNLCPP 409
>gb|CX650703.1|CX650703 COLD1_47_B12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_47_B12_A029 5', mRNA sequence
Length = 629
Score = 100 bits (212), Expect(4) = 2e-047
Identities = 38/69 (55%), Positives = 54/69 (78%)
Frame = +3 / +3
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF +IA+ K GIVPI YR+V C RKGGIR+T+ G+ +++ V +TNVGG GDV
Sbjct: 246 QHFDMAEPAFQQIAKYKGGIVPILYRRVPCVRKGGIRFTVNGHSYFNLVLITNVGGPGDV 425
Query: 603 VALWVKGNK 629
A+ +KG++
Sbjct: 426 HAVSIKGSR 452
Score = 67.0 bits (140), Expect(4) = 2e-047
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +3 / +3
Query: 630 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 794
R W PM R+WGQ W + L +SL+F+V T+D + S++ P WQFG+T++
Sbjct: 450 RTGWQPMSRNWGQNWQSNSYLNEQSLSFQVTTSDGKTFVSYNAAPSSWQFGQTFE 614
Score = 53.8 bits (111), Expect(4) = 2e-047
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3 / +3
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ +G CGACYE++
Sbjct: 6 TMGGACGYGNLNSQGYGTNTAALSTALFNDGLSCGACYEMQ 128
Score = 25.8 bits (50), Expect(4) = 2e-047
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 159 GTVTVTATNFCPP 197
>gb|DR096273.1|DR096273 STRR1_26_H05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_26_H05_A033 5', mRNA sequence
Length = 801
Score = 97.7 bits (207), Expect(4) = 2e-047
Identities = 36/68 (52%), Positives = 56/68 (82%)
Frame = +3 / +3
Query: 426 HFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDVV 605
HFDL++P FLK+AE +AGIVP+ +R+V C ++GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 447 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 626
Query: 606 ALWVKGNK 629
+ VKG++
Sbjct: 627 RVSVKGSQ 650
Score = 68.4 bits (143), Expect(4) = 2e-047
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +3 / +3
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFG 782
W P+ R+WGQ W L G+SL+FR+ +D + +TSW++ P +W+FG
Sbjct: 657 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDPQTSTSWNIVPPNWEFG 800
Score = 51.0 bits (105), Expect(4) = 2e-047
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3 / +3
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YG +AA+ +L+ +G CGAC+E+K
Sbjct: 198 TMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIK 320
Score = 34.5 bits (69), Expect(4) = 2e-047
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3 / +3
Query: 156 GKFKAEPWTDGHATYYGGRD 215
G ++ PW + HAT+YGG D
Sbjct: 129 GVYQPGPWNEAHATFYGGSD 188
>gb|CF386766.1|CF386766 RTDR1_16_C08.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_16_C08_A015 5', mRNA
sequence
Length = 774
Score = 97.3 bits (206), Expect(5) = 2e-047
Identities = 38/68 (55%), Positives = 52/68 (76%)
Frame = +3 / +1
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
EHFD+ +PAF +IA KAGIVP+ YR+V C + GGIR+TI GN+++ + +TNVGG GDV
Sbjct: 418 EHFDMAMPAFEQIAIWKAGIVPVQYRRVRCAKGGGIRFTIHGNRYFYLILITNVGGDGDV 597
Query: 603 VALWVKGN 626
+ VKG+
Sbjct: 598 AEVMVKGS 621
Score = 65.2 bits (136), Expect(5) = 2e-047
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +3 / +1
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFG 782
W P+ R+WGQ W + +L G++L+F+V ++ TS++V P DWQFG
Sbjct: 631 WLPLTRNWGQNWQSNTNLQGQALSFQVSSSSGHTITSYNVAPSDWQFG 774
Score = 52.8 bits (109), Expect(5) = 2e-047
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +3 / +1
Query: 237 SGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
+GACGY + YGT TAA+ L+ +G CGAC+E+K
Sbjct: 178 AGACGYGNLYSQGYGTNTAALSAILFDSGAACGACFEIK 294
Score = 25.8 bits (50), Expect(5) = 2e-047
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3 / +1
Query: 177 WTDGHATYYGGRD 215
W HAT YGG D
Sbjct: 124 WNSAHATLYGGGD 162
Score = 22.6 bits (43), Expect(5) = 2e-047
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 366 TVVVTATNEAPP 401
+VV+TATN PP
Sbjct: 334 SVVITATNFCPP 369
>gb|CF400637.1|CF400637 RTWW1_6_B06.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_6_B06_A015 5', mRNA sequence
Length = 761
Score = 97.3 bits (206), Expect(5) = 2e-047
Identities = 38/68 (55%), Positives = 52/68 (76%)
Frame = +3 / +3
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
EHFD+ +PAF +IA KAGIVP+ YR+V C + GGIR+TI GN+++ + +TNVGG GDV
Sbjct: 405 EHFDMAMPAFEQIAIWKAGIVPVQYRRVRCAKGGGIRFTIHGNRYFYLILITNVGGDGDV 584
Query: 603 VALWVKGN 626
+ VKG+
Sbjct: 585 AEVMVKGS 608
Score = 65.2 bits (136), Expect(5) = 2e-047
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +3 / +3
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFG 782
W P+ R+WGQ W + +L G++L+F+V ++ TS++V P DWQFG
Sbjct: 618 WLPLTRNWGQNWQSNTNLQGQALSFQVSSSSGHTITSYNVAPSDWQFG 761
Score = 52.8 bits (109), Expect(5) = 2e-047
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +3 / +3
Query: 237 SGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
+GACGY + YGT TAA+ L+ +G CGAC+E+K
Sbjct: 165 AGACGYGNLYSQGYGTNTAALSAILFDSGAACGACFEIK 281
Score = 25.8 bits (50), Expect(5) = 2e-047
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3 / +3
Query: 177 WTDGHATYYGGRD 215
W HAT YGG D
Sbjct: 111 WNSAHATLYGGGD 149
Score = 22.6 bits (43), Expect(5) = 2e-047
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 366 TVVVTATNEAPP 401
+VV+TATN PP
Sbjct: 321 SVVITATNFCPP 356
>gb|DR070312.1|DR070312 RTDK1_12_C03.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_12_C03_A029 5', mRNA sequence
Length = 710
Score = 97.3 bits (206), Expect(5) = 8e-047
Identities = 36/69 (52%), Positives = 54/69 (78%)
Frame = +3 / +3
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFDL+ P F IA+ +AGIVP+ Y++V C R GGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 375 QHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTVNGHSYFNLVLITNVGGAGDV 554
Query: 603 VALWVKGNK 629
A+ +KG++
Sbjct: 555 HAVSIKGSR 581
Score = 55.1 bits (114), Expect(5) = 8e-047
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +3 / +3
Query: 630 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWH 755
R W PM R+WGQ W + L G+SL+F+V T+D R TS++
Sbjct: 579 RTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVTSYN 704
Score = 53.3 bits (110), Expect(5) = 8e-047
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +3 / +3
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGAC+ ++
Sbjct: 135 TMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIR 257
Score = 31.3 bits (62), Expect(5) = 8e-047
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / +3
Query: 168 AEPWTDGHATYYGGRD 215
A WT+ HAT+YGG D
Sbjct: 78 AHGWTNAHATFYGGGD 125
Score = 24.9 bits (48), Expect(5) = 8e-047
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 363 GTVVVTATNEAPP 401
G +VVTATN PP
Sbjct: 288 GAIVVTATNFCPP 326
>gb|DR097316.1|DR097316 STRR1_33_H05.g3_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_33_H05_A033 5', mRNA sequence
Length = 794
Score = 95.5 bits (202), Expect(4) = 8e-047
Identities = 39/68 (57%), Positives = 52/68 (76%)
Frame = +3 / -1
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF +IA K GIVPI YR+V C RKGGIR+TI G+ +++ V +TNV GAGDV
Sbjct: 533 QHFDMAEPAFQQIAICKGGIVPILYRRVPCLRKGGIRFTINGHAYFNLVLITNVAGAGDV 354
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 353 HAVSIKGS 330
Score = 68.0 bits (142), Expect(4) = 8e-047
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +3 / -1
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 803
W M R+WGQ W + L G+SL+F+V T+D + S+ V P WQFG+T++ ++
Sbjct: 320 WQAMSRNWGQNWQSNSYLNGQSLSFQVTTSDGKTTVSYSVAPSGWQFGQTFEGSQ 156
Score = 55.1 bits (114), Expect(4) = 8e-047
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3 / -1
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ +G CG+CYE+K
Sbjct: 773 TMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGSCYEMK 651
Score = 25.8 bits (50), Expect(4) = 8e-047
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / -1
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 620 GTVTVTATNFCPP 582
>gb|CX649475.1|CX649475 COLD1_35_B04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_35_B04_A029 5', mRNA sequence
Length = 670
Score = 97.7 bits (207), Expect(4) = 1e-046
Identities = 36/68 (52%), Positives = 56/68 (82%)
Frame = +3 / +1
Query: 426 HFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDVV 605
HFDL++P FLK+AE +AGIVP+ +R+V C ++GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 307 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 486
Query: 606 ALWVKGNK 629
+ VKG++
Sbjct: 487 RVSVKGSQ 510
Score = 75.8 bits (159), Expect(4) = 1e-046
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +3 / +1
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 791
W P+ R+WGQ W L G+SL+FRV +D R +TSW++ P +W+FG+T+
Sbjct: 517 WIPLSRNWGQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTF 669
Score = 51.0 bits (105), Expect(4) = 1e-046
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3 / +1
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YG +AA+ +L+ +G CGAC+E+K
Sbjct: 58 TMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIK 180
Score = 24.0 bits (46), Expect(4) = 1e-046
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 183 DGHATYYGGRD 215
+ HAT+YGG D
Sbjct: 16 EAHATFYGGSD 48
>gb|CO368748.1|CO368748 RTK1_42_C07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_42_C07_A029 5', mRNA sequence
Length = 700
Score = 95.5 bits (202), Expect(4) = 1e-046
Identities = 36/69 (52%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF +IA ++GIVPI +R+V C RKGG+R+ I G+ +++ V +TNVGG GDV
Sbjct: 285 QHFDMAQPAFQQIAIYRSGIVPIMFRRVPCVRKGGVRFAINGHSYFNLVLITNVGGVGDV 464
Query: 603 VALWVKGNK 629
A+ +KG+K
Sbjct: 465 EAVSIKGSK 491
Score = 67.0 bits (140), Expect(4) = 1e-046
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +3 / +3
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 794
W M R+WGQ W + L G++L+F+V T+D R TS++V +WQFG+T++
Sbjct: 498 WQAMSRNWGQNWQSNSYLNGQTLSFQVTTSDGRTITSYNVASANWQFGQTFE 653
Score = 55.1 bits (114), Expect(4) = 1e-046
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +3 / +3
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T G CGY + YGT TAA+ +L+ NG CGACY++K
Sbjct: 39 TMGGVCGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMK 161
Score = 25.8 bits (50), Expect(4) = 1e-046
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 198 GTVTVTATNLCPP 236
>gb|DT633920.1|DT633920 EST1148851 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG023 3' end, mRNA sequence
Length = 903
Score = 114 bits (244), Expect(5) = 2e-046
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3 / +1
Query: 426 HFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDVV 605
HFD+ +PAF +IA+ K GIVP+ YR+V C + GGIR+TI G +++ V VTNVG AGDV+
Sbjct: 535 HFDMAMPAFEQIAKVKGGIVPVRYRRVYCAKNGGIRFTINGQRYFIMVMVTNVGRAGDVI 714
Query: 606 ALWVKGNKRVKWTPMKRSWGQLWTT 680
++ VK + W PMKR+ GQ W T
Sbjct: 715 SVSVKASNSDLWEPMKRN*GQNWQT 789
Score = 50.6 bits (104), Expect(5) = 2e-046
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3 / +1
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT T A+ +L+ +G CG CYE++
Sbjct: 283 TLGGACGYGDLYSQGYGTNTVALSTALFNDGLSCGGCYEIR 405
Score = 43.7 bits (89), Expect(5) = 2e-046
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3 / +1
Query: 675 TTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 791
T L G+SL+F V T+D A S V P +WQFG+T+
Sbjct: 787 TGNSQLVGQSLSFSVTTSDGNTAISPEVAPPNWQFGQTF 903
Score = 27.2 bits (53), Expect(5) = 2e-046
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +1
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 235 WKHAHATFYGGSD 273
Score = 24.4 bits (47), Expect(5) = 2e-046
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3 / +1
Query: 357 PKGTVVVTATNEAPP 401
P +VVVTATN PP
Sbjct: 439 PGTSVVVTATNFCPP 483
>gb|DR093671.1|DR093671 STRR1_9_E07.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_9_E07_A033 5', mRNA sequence
Length = 789
Score = 96.8 bits (205), Expect(5) = 2e-046
Identities = 36/68 (52%), Positives = 54/68 (79%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF KIA ++GIVPI +R++ C R+GG+R+TI G+ +++ V +TNVGGAGDV
Sbjct: 446 QHFDMAQPAFQKIAIYRSGIVPIMFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDV 625
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 626 EAVSIKGS 649
Score = 58.3 bits (121), Expect(5) = 2e-046
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YGT TAA+ +L+ NG CGACYE+K
Sbjct: 200 TMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMK 322
Score = 51.9 bits (107), Expect(5) = 2e-046
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +3 / +2
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTP 764
W M R+WGQ W + L G++L+F+V T+D R TS++V P
Sbjct: 659 WQTMSRNWGQNWQSNSYLNGQTLSFQVSTSDGRIITSYNVAP 784
Score = 27.6 bits (54), Expect(5) = 2e-046
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 177 WTDGHATYYGGRD 215
W HAT+YGG D
Sbjct: 152 WQSAHATFYGGSD 190
Score = 25.8 bits (50), Expect(5) = 2e-046
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 359 GTVTVTATNLCPP 397
>gb|DR096360.1|DR096360 STRR1_27_B05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_27_B05_A033 5', mRNA sequence
Length = 780
Score = 98.7 bits (209), Expect(4) = 3e-046
Identities = 37/68 (54%), Positives = 54/68 (79%)
Frame = +3 / +3
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFD+ PAF ++A ++GIVPI +R+V C RKGG+R+TI GN +++ V +TNVGGAGDV
Sbjct: 225 QHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDV 404
Query: 603 VALWVKGN 626
A+ +KG+
Sbjct: 405 EAVSIKGS 428
Score = 73.9 bits (155), Expect(4) = 3e-046
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +3 / +3
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 794
W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+T++
Sbjct: 438 WQPMSRNWGQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFE 593
Score = 44.1 bits (90), Expect(4) = 3e-046
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3 / +3
Query: 276 YGTLTAAVGPSLYTNGTGCGACYELK 353
YGT TAA+ +L+ NG CGACY++K
Sbjct: 24 YGTNTAALSTALFNNGATCGACYQMK 101
Score = 25.8 bits (50), Expect(4) = 3e-046
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 363 GTVVVTATNEAPP 401
GTV VTATN PP
Sbjct: 138 GTVTVTATNLCPP 176
>gb|CF476071.1|CF476071 RTWW2_16_D03.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_16_D03_A021 5', mRNA sequence
Length = 725
Score = 97.3 bits (206), Expect(4) = 2e-045
Identities = 36/69 (52%), Positives = 54/69 (78%)
Frame = +3 / +2
Query: 423 EHFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDV 602
+HFDL+ P F IA+ +AGIVP+ Y++V C R GGIR+T+ G+ +++ V +TNVGGAGDV
Sbjct: 203 QHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTVNGHSYFNLVLITNVGGAGDV 382
Query: 603 VALWVKGNK 629
A+ +KG++
Sbjct: 383 HAVSIKGSR 409
Score = 75.3 bits (158), Expect(4) = 2e-045
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +3 / +2
Query: 630 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 791
R W PM R+WGQ W + L G+SL+F+V T+D R TS++ P +WQFG+T+
Sbjct: 407 RTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVTSYNAAPSNWQFGQTF 568
Score = 42.3 bits (86), Expect(4) = 2e-045
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3 / +2
Query: 276 YGTLTAAVGPSLYTNGTGCGACYELK 353
YGT+TAA+ +L+ NG CGAC+ ++
Sbjct: 8 YGTITAALSTALFNNGLSCGACFAIR 85
Score = 24.9 bits (48), Expect(4) = 2e-045
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
G +VVTATN PP
Sbjct: 116 GAIVVTATNFCPP 154
>gb|DR683982.1|DR683982 EST1074058 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAN59 3' end, mRNA sequence
Length = 876
Score = 98.7 bits (209), Expect(4) = 2e-045
Identities = 40/67 (59%), Positives = 53/67 (79%)
Frame = +3 / +2
Query: 426 HFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDVV 605
HFD+ PAF KIA+ K+GIVPI YR+V C RKGGIR+TI G +++ V ++NVGGAGDV
Sbjct: 197 HFDMAEPAFEKIAKYKSGIVPILYRRVPCLRKGGIRFTINGLPYFNLVLISNVGGAGDVQ 376
Query: 606 ALWVKGN 626
A+ +KG+
Sbjct: 377 AVSIKGS 397
Score = 74.4 bits (156), Expect(4) = 2e-045
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +3 / +2
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 803
W PM R+WGQ W + L G+SL+F+V T+D R S++ P +WQFG+T+Q ++
Sbjct: 407 WQPMSRNWGQNWQSNSFLNGQSLSFKVTTSDGRTIVSYNAAPSNWQFGQTFQGSQ 571
Score = 42.3 bits (86), Expect(4) = 2e-045
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 279 GTLTAAVGPSLYTNGTGCGACYELK 353
GT TAA+ +L+ NG CGACYE+K
Sbjct: 2 GTDTAALSTALFNNGLSCGACYEMK 76
Score = 24.0 bits (46), Expect(4) = 2e-045
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 363 GTVVVTATNEAPP 401
G+V VTATN PP
Sbjct: 107 GSVTVTATNFCPP 145
>gb|DT631935.1|DT631935 EST1146866 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFE52 3' end, mRNA sequence
Length = 858
Score = 98.7 bits (209), Expect(4) = 2e-045
Identities = 40/67 (59%), Positives = 53/67 (79%)
Frame = +3 / +1
Query: 426 HFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDVV 605
HFD+ PAF KIA+ K+GIVPI YR+V C RKGGIR+TI G +++ V ++NVGGAGDV
Sbjct: 205 HFDMAEPAFEKIAKYKSGIVPILYRRVPCLRKGGIRFTINGLPYFNLVLISNVGGAGDVQ 384
Query: 606 ALWVKGN 626
A+ +KG+
Sbjct: 385 AVSIKGS 405
Score = 74.4 bits (156), Expect(4) = 2e-045
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +3 / +1
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 803
W PM R+WGQ W + L G+SL+F+V T+D R S++ P +WQFG+T+Q ++
Sbjct: 415 WQPMSRNWGQNWQSNSFLNGQSLSFKVTTSDGRTIVSYNAAPSNWQFGQTFQGSQ 579
Score = 42.3 bits (86), Expect(4) = 2e-045
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 279 GTLTAAVGPSLYTNGTGCGACYELK 353
GT TAA+ +L+ NG CGACYE+K
Sbjct: 10 GTDTAALSTALFNNGLSCGACYEMK 84
Score = 24.0 bits (46), Expect(4) = 2e-045
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +1
Query: 363 GTVVVTATNEAPP 401
G+V VTATN PP
Sbjct: 115 GSVTVTATNFCPP 153
>gb|DR055148.1|DR055148 RTCA1_21_G09.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_21_G09_A029 5', mRNA sequence
Length = 722
Score = 97.7 bits (207), Expect(4) = 4e-045
Identities = 36/68 (52%), Positives = 56/68 (82%)
Frame = +3 / +3
Query: 426 HFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDVV 605
HFDL++P FLK+AE +AGIVP+ +R+V C ++GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 381 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 560
Query: 606 ALWVKGNK 629
+ VKG++
Sbjct: 561 RVSVKGSQ 584
Score = 60.2 bits (125), Expect(4) = 4e-045
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +3 / +3
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTP 764
W P+ R+WGQ W L G+SL+FR+ +D R +TSW++ P
Sbjct: 591 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVP 716
Score = 51.0 bits (105), Expect(4) = 4e-045
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3 / +3
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YG +AA+ +L+ +G CGAC+E+K
Sbjct: 132 TMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIK 254
Score = 34.5 bits (69), Expect(4) = 4e-045
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3 / +3
Query: 156 GKFKAEPWTDGHATYYGGRD 215
G ++ PW + HAT+YGG D
Sbjct: 63 GVYQPGPWNEAHATFYGGSD 122
>gb|DR070152.1|DR070152 RTDK1_11_D01.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_11_D01_A029 5', mRNA sequence
Length = 748
Score = 97.7 bits (207), Expect(3) = 8e-045
Identities = 36/68 (52%), Positives = 56/68 (82%)
Frame = +3 / +2
Query: 426 HFDLTIPAFLKIAEEKAGIVPITYRKVACERKGGIRYTITGNQHYSEVKVTNVGGAGDVV 605
HFDL++P FLK+AE +AGIVP+ +R+V C ++GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 284 HFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLV 463
Query: 606 ALWVKGNK 629
+ VKG++
Sbjct: 464 RVSVKGSQ 487
Score = 75.3 bits (158), Expect(3) = 8e-045
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = +3 / +2
Query: 639 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 791
W P+ R+WGQ W L G+SL+FR+ +D R +TSW++ P +W+FG+T+
Sbjct: 494 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTF 646
Score = 51.0 bits (105), Expect(3) = 8e-045
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3 / +2
Query: 231 TDSGACGYKGELGKDYGTLTAAVGPSLYTNGTGCGACYELK 353
T GACGY + YG +AA+ +L+ +G CGAC+E+K
Sbjct: 35 TMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIK 157
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 429,244,152
Number of Sequences: 355925
Number of extensions: 5559945
Number of successful extensions: 40485
Number of sequences better than 1.0e-020: 205
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 15318651920
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)