TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3183567.2.1
(681 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW289613.1|AW289613 NXNV003D10F Nsf Xylem Normal wood Ve... 206 1e-052
gb|CD028204.1|CD028204 NXNV003D10 Nsf Xylem Normal wood Ver... 206 1e-052
gb|CF399887.1|CF399887 RTWW1_1_D04.g1_A015 Well-watered lob... 206 1e-052
gb|CF474765.1|CF474765 RTWW2_7_F03.g1_A021 Well-watered lob... 206 1e-052
gb|CF670349.1|CF670349 RTCNT1_49_D10.g1_A029 Root control P... 206 1e-052
gb|CO165928.1|CO165928 FLD1_58_D10.b1_A029 Root flooded Pin... 206 1e-052
gb|CO166005.1|CO166005 FLD1_58_D10.g1_A029 Root flooded Pin... 206 1e-052
gb|CO166686.1|CO166686 FLD1_63_F11.g1_A029 Root flooded Pin... 206 1e-052
gb|CO197211.1|CO197211 GEO1_4_D04.g1_A029 Root gravitropism... 206 1e-052
gb|CO197920.1|CO197920 GEO1_10_B10.b1_A029 Root gravitropis... 206 1e-052
gb|CO197988.1|CO197988 GEO1_10_B10.g1_A029 Root gravitropis... 206 1e-052
gb|CO201191.1|CO201191 RTCNT2_4_E04.b1_A029 Root control 2 ... 206 1e-052
gb|CO363028.1|CO363028 RTK1_7_E07.b1_A029 Roots minus potas... 206 1e-052
gb|CO364596.1|CO364596 RTK1_16_D11.g1_A029 Roots minus pota... 206 1e-052
gb|CO366266.1|CO366266 RTK1_26_G09.g1_A029 Roots minus pota... 206 1e-052
gb|CO370142.1|CO370142 RTK1_65_F06.g1_A029 Roots minus pota... 206 1e-052
gb|CV032338.1|CV032338 RTNACL1_7_A06.g2_A029 Roots plus add... 206 1e-052
gb|CX650356.1|CX650356 COLD1_45_D04.b1_A029 Root cold Pinus... 206 1e-052
gb|CX650430.1|CX650430 COLD1_45_D04.g1_A029 Root cold Pinus... 206 1e-052
gb|CX652498.1|CX652498 COLD1_59_B02.g1_A029 Root cold Pinus... 206 1e-052
gb|DR057460.1|DR057460 RTNIT1_6_A05.b1_A029 Roots minus nit... 206 1e-052
gb|DR095347.1|DR095347 STRR1_20_A09.g1_A033 Stem Response R... 206 1e-052
gb|DR100186.1|DR100186 STRR1_62_G03.b1_A033 Stem Response R... 206 1e-052
gb|DR163950.1|DR163950 RTFE1_46_A01.b1_A029 Roots minus iro... 206 1e-052
gb|DR164031.1|DR164031 RTFE1_46_A01.g1_A029 Roots minus iro... 206 1e-052
gb|DR178480.1|DR178480 RTMNUT1_12_C09.b1_A029 Roots minus m... 206 1e-052
gb|DR181719.1|DR181719 RTMNUT1_40_C12.g2_A029 Roots minus m... 206 1e-052
gb|DR162430.1|DR162430 RTFE1_17_F05.g1_A029 Roots minus iro... 203 1e-051
gb|DR072761.1|DR072761 RTDK1_28_A01.g1_A029 Roots, dark Pin... 200 6e-051
gb|BF609092.1|BF609092 NXSI_040_C10_F NXSI (Nsf Xylem Side ... 197 8e-050
gb|DR182074.1|DR182074 RTMNUT1_42_F03.g1_A029 Roots minus m... 188 3e-047
gb|DR182229.1|DR182229 RTMNUT1_43_E03.g1_A029 Roots minus m... 188 3e-047
gb|CO196758.1|CO196758 GEO1_1_H07.b1_A029 Root gravitropism... 109 3e-046
gb|CX712668.1|CX712668 RTPQ1_4_A07.b2_A032 Roots treated wi... 184 4e-046
gb|AW290638.1|AW290638 NXNV044D05F Nsf Xylem Normal wood Ve... 180 8e-045
gb|CD027299.1|CD027299 NXNV044D05 Nsf Xylem Normal wood Ver... 180 8e-045
gb|CX712195.1|CX712195 RTPQ1_1_A07.b2_A032 Roots treated wi... 173 1e-042
gb|BX784236.1|BX784236 BX784236 Pinus pinaster differenciat... 129 7e-041
gb|DR165586.1|DR165586 RTPHOS1_6_C02.b1_A029 Roots minus ph... 125 2e-039
gb|DR165662.1|DR165662 RTPHOS1_6_C02.g1_A029 Roots minus ph... 125 2e-039
gb|DR070571.1|DR070571 RTDK1_14_E02.b1_A029 Roots, dark Pin... 125 2e-039
gb|DR090231.1|DR090231 RTAL1_13_D02.g1_A029 Roots plus adde... 125 2e-039
gb|DR010735.1|DR010735 HEAT1_1_B04.b1_A029 Root at 37 C for... 125 2e-039
gb|CF401921.1|CF401921 RTWW1_15_A10.g1_A015 Well-watered lo... 125 2e-039
gb|CF401985.1|CF401985 RTWW1_16_H07.g1_A015 Well-watered lo... 125 2e-039
gb|DR080380.1|DR080380 RTFEPL1_22_F07.b1_A029 Roots plus ad... 125 2e-039
gb|CV036542.1|CV036542 RTNACL1_60_A12.b1_A029 Roots plus ad... 125 2e-039
gb|DR744763.1|DR744763 RTCU1_24_F02.g1_A029 Roots plus adde... 125 2e-039
gb|DR744692.1|DR744692 RTCU1_24_F02.b1_A029 Roots plus adde... 125 2e-039
gb|BQ702965.1|BQ702965 NXSI_134_G06_F NXSI (Nsf Xylem Side ... 125 2e-039
gb|DR011532.1|DR011532 HEAT1_6_G02.b1_A029 Root at 37 C for... 125 2e-039
gb|DR167668.1|DR167668 RTPHOS1_20_G04.b1_A029 Roots minus p... 125 3e-039
gb|BQ291085.1|BQ291085 NXRV055_E02_F NXRV (Nsf Xylem Root w... 123 7e-039
gb|BX252033.1|BX252033 BX252033 Pinus pinaster differenciat... 160 9e-039
gb|CF398741.1|CF398741 RTDS3_16_D04.b1_A022 Drought-stresse... 160 9e-039
gb|CO199758.1|CO199758 GEO2_3_G04.b1_A032 Root gravitropism... 125 3e-038
gb|CF391753.1|CF391753 RTDR3_11_E11.g1_A022 Loblolly pine r... 135 3e-038
gb|CO199841.1|CO199841 GEO2_3_G04.g1_A032 Root gravitropism... 125 3e-038
gb|BE496606.1|BE496606 NXCI_021_F01_F NXCI (Nsf Xylem Compr... 119 2e-036
gb|U31309.1|PTU31309 Pinus taeda chitinase homolog LP6 (lp6... 115 3e-035
gb|DR181988.1|DR181988 RTMNUT1_42_F03.b1_A029 Roots minus m... 147 7e-035
gb|BQ635082.1|BQ635082 NXRV076_G07_F NXRV (Nsf Xylem Root w... 110 9e-035
gb|BF169572.1|BF169572 NXCI_124_E07_F NXCI (Nsf Xylem Compr... 125 1e-034
gb|BQ699734.1|BQ699734 NXRV128_B12_F NXRV (Nsf Xylem Root w... 73 2e-034
gb|BX254139.1|BX254139 BX254139 Pinus pinaster differenciat... 106 8e-034
gb|DR095276.1|DR095276 STRR1_20_A09.b1_A033 Stem Response R... 140 8e-033
gb|DR182149.1|DR182149 RTMNUT1_43_E03.b1_A029 Roots minus m... 140 8e-033
gb|DR012305.1|DR012305 HEAT1_11_G01.g1_A029 Root at 37 C fo... 139 1e-032
gb|DR178567.1|DR178567 RTMNUT1_12_C09.g1_A029 Roots minus m... 138 5e-032
gb|BF518085.1|BF518085 NXSI_030_G10_F NXSI (Nsf Xylem Side ... 125 1e-031
gb|AW888072.1|AW888072 NXNV_126_H11_F Nsf Xylem Normal wood... 125 2e-031
gb|BQ700156.1|BQ700156 NXRV101_H06_F NXRV (Nsf Xylem Root w... 100 3e-031
gb|BI644045.1|BI644045 NXPV_127_E03_F NXPV (Nsf Xylem Plani... 100 5e-031
gb|CV032327.1|CV032327 RTNACL1_7_H02.b1_A029 Roots plus add... 133 9e-031
gb|AW289485.1|AW289485 NXNV001F10F Nsf Xylem Normal wood Ve... 125 5e-030
gb|CD028071.1|CD028071 NXNV001F10 Nsf Xylem Normal wood Ver... 125 5e-030
gb|CO173924.1|CO173924 NDL1_40_A06.g1_A029 Needles control ... 130 1e-029
gb|CO364516.1|CO364516 RTK1_16_D11.b1_A029 Roots minus pota... 129 2e-029
gb|BQ695988.1|BQ695988 NXPV_035_B05_F NXPV (Nsf Xylem Plani... 91 5e-029
gb|BG040938.1|BG040938 NXSI_116_H04_F NXSI (Nsf Xylem Side ... 125 3e-028
gb|DR090165.1|DR090165 RTAL1_13_D02.b1_A029 Roots plus adde... 125 3e-028
gb|CO367753.1|CO367753 RTK1_36_H08.b1_A029 Roots minus pota... 123 1e-027
gb|BE997130.1|BE997130 NXCI_104_C06_F NXCI (Nsf Xylem Compr... 119 2e-026
gb|BQ196919.1|BQ196919 NXLV107_A11_F NXLV (Nsf Xylem Late w... 119 2e-026
gb|DR070639.1|DR070639 RTDK1_14_E02.g1_A029 Roots, dark Pin... 117 6e-026
gb|AW697921.1|AW697921 NXNV_072_A02_F Nsf Xylem Normal wood... 114 8e-025
gb|AW290059.1|AW290059 NXNV010E07F Nsf Xylem Normal wood Ve... 73 7e-024
gb|CD026749.1|CD026749 NXNV010E07 Nsf Xylem Normal wood Ver... 73 7e-024
gb|DR047747.1|DR047747 RTBOR1_3_E09.b1_A029 Roots plus adde... 92 3e-023
gb|BF221188.1|BF221188 NXCI_164_F08_F NXCI (Nsf Xylem Compr... 108 3e-023
gb|BE607275.1|BE607275 NXCI_038_D01_F NXCI (Nsf Xylem Compr... 73 4e-022
gb|CF398042.1|CF398042 RTDS3_22_H09.b1_A022 Drought-stresse... 104 8e-022
gb|CF399803.1|CF399803 RTWW1_1_D04.b1_A015 Well-watered lob... 104 8e-022
gb|AW290563.1|AW290563 NXNV031D08F Nsf Xylem Normal wood Ve... 102 2e-021
gb|BX252462.1|BX252462 BX252462 Pinus pinaster differenciat... 102 2e-021
gb|BX252471.1|BX252471 BX252471 Pinus pinaster differenciat... 102 2e-021
gb|BI398018.1|BI398018 NXPV_113_E04_F NXPV (Nsf Xylem Plani... 102 2e-021
gb|CD027227.1|CD027227 NXNV031D08 Nsf Xylem Normal wood Ver... 102 2e-021
gb|CO167768.1|CO167768 FLD1_71_B12.b1_A029 Root flooded Pin... 64 5e-021
>gb|AW289613.1|AW289613 NXNV003D10F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV003D10 5', mRNA sequence
Length = 497
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / +3
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 60 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 239
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 240 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 419
Query: 317 NPSS 306
NP S
Sbjct: 420 NPVS 431
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / -2
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 424 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 245
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 244 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 65
Query: 673 AG 678
G
Sbjct: 64 IG 59
>gb|CD028204.1|CD028204 NXNV003D10 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV003D10 5' similar to Arabidopsis thaliana sequence
At1g05850 putative endochitinase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 497
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / +3
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 60 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 239
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 240 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 419
Query: 317 NPSS 306
NP S
Sbjct: 420 NPVS 431
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / -2
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 424 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 245
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 244 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 65
Query: 673 AG 678
G
Sbjct: 64 IG 59
>gb|CF399887.1|CF399887 RTWW1_1_D04.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_1_D04_A015 5', mRNA sequence
Length = 671
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / +1
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 196 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 375
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 376 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 555
Query: 317 NPSS 306
NP S
Sbjct: 556 NPVS 567
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / -1
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 560 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 381
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 380 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 201
Query: 673 AG 678
G
Sbjct: 200 IG 195
>gb|CF474765.1|CF474765 RTWW2_7_F03.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_7_F03_A021 5', mRNA sequence
Length = 728
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / +2
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 194 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 373
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 374 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 553
Query: 317 NPSS 306
NP S
Sbjct: 554 NPVS 565
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / -3
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 558 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 379
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 378 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVKNPIVALFDTMSGLVSKSSFSASP 199
Query: 673 AG 678
G
Sbjct: 198 IG 193
>gb|CF670349.1|CF670349 RTCNT1_49_D10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_49_D10_A029 5', mRNA sequence
Length = 745
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / -1
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 607 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 428
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 427 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 248
Query: 317 NPSS 306
NP S
Sbjct: 247 NPVS 236
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / +3
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 243 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 422
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 423 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 602
Query: 673 AG 678
G
Sbjct: 603 IG 608
>gb|CO165928.1|CO165928 FLD1_58_D10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_58_D10_A029 3', mRNA sequence
Length = 866
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / -2
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 691 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 512
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 511 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 332
Query: 317 NPSS 306
NP S
Sbjct: 331 NPVS 320
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / +3
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 327 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 506
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 507 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 686
Query: 673 AG 678
G
Sbjct: 687 IG 692
>gb|CO166005.1|CO166005 FLD1_58_D10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_58_D10_A029 5', mRNA sequence
Length = 867
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / -3
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 700 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 521
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 520 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 341
Query: 317 NPSS 306
NP S
Sbjct: 340 NPVS 329
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / +3
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 336 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 515
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 516 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 695
Query: 673 AG 678
G
Sbjct: 696 IG 701
>gb|CO166686.1|CO166686 FLD1_63_F11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_63_F11_A029 5', mRNA sequence
Length = 809
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / -3
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 744 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 565
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 564 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 385
Query: 317 NPSS 306
NP S
Sbjct: 384 NPVS 373
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / +2
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 380 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 559
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 560 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 739
Query: 673 AG 678
G
Sbjct: 740 IG 745
>gb|CO197211.1|CO197211 GEO1_4_D04.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_4_D04_A029 5', mRNA sequence
Length = 798
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / -1
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 690 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 511
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 510 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 331
Query: 317 NPSS 306
NP S
Sbjct: 330 NPVS 319
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / +2
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 326 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 505
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 506 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 685
Query: 673 AG 678
G
Sbjct: 686 IG 691
>gb|CO197920.1|CO197920 GEO1_10_B10.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_10_B10_A029 3', mRNA sequence
Length = 828
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / +2
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 134 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 313
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 314 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 493
Query: 317 NPSS 306
NP S
Sbjct: 494 NPVS 505
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / -1
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 498 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 319
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 318 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 139
Query: 673 AG 678
G
Sbjct: 138 IG 133
>gb|CO197988.1|CO197988 GEO1_10_B10.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_10_B10_A029 5', mRNA sequence
Length = 718
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / +1
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 223 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 402
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 403 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 582
Query: 317 NPSS 306
NP S
Sbjct: 583 NPVS 594
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / -3
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 587 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 408
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 407 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 228
Query: 673 AG 678
G
Sbjct: 227 IG 222
>gb|CO201191.1|CO201191 RTCNT2_4_E04.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_4_E04_A029 3', mRNA sequence
Length = 843
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / +1
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 175 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 354
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 355 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 534
Query: 317 NPSS 306
NP S
Sbjct: 535 NPVS 546
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / -2
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 539 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 360
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 359 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 180
Query: 673 AG 678
G
Sbjct: 179 IG 174
>gb|CO363028.1|CO363028 RTK1_7_E07.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_7_E07_A029 3', mRNA sequence
Length = 685
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / +2
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 17 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 196
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 197 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 376
Query: 317 NPSS 306
NP S
Sbjct: 377 NPVS 388
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / -2
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 381 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 202
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 201 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 22
Query: 673 AG 678
G
Sbjct: 21 IG 16
>gb|CO364596.1|CO364596 RTK1_16_D11.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_16_D11_A029 5', mRNA sequence
Length = 825
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / -3
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 547 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 368
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 367 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 188
Query: 317 NPSS 306
NP S
Sbjct: 187 NPVS 176
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / +3
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 183 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 362
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 363 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 542
Query: 673 AG 678
G
Sbjct: 543 IG 548
>gb|CO366266.1|CO366266 RTK1_26_G09.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_26_G09_A029 5', mRNA sequence
Length = 825
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / -3
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 772 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 593
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 592 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 413
Query: 317 NPSS 306
NP S
Sbjct: 412 NPVS 401
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / +3
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 408 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 587
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 588 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 767
Query: 673 AG 678
G
Sbjct: 768 IG 773
>gb|CO370142.1|CO370142 RTK1_65_F06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_65_F06_A029 5', mRNA sequence
Length = 801
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / -2
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 545 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 366
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 365 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 186
Query: 317 NPSS 306
NP S
Sbjct: 185 NPVS 174
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / +1
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 181 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 360
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 361 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 540
Query: 673 AG 678
G
Sbjct: 541 IG 546
>gb|CV032338.1|CV032338 RTNACL1_7_A06.g2_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_7_A06_A029 5', mRNA sequence
Length = 664
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / -2
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 648 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 469
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 468 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 289
Query: 317 NPSS 306
NP S
Sbjct: 288 NPVS 277
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / +2
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 284 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 463
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 464 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 643
Query: 673 AG 678
G
Sbjct: 644 IG 649
>gb|CX650356.1|CX650356 COLD1_45_D04.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_45_D04_A029 3', mRNA sequence
Length = 810
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / +2
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 125 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 304
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 305 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 484
Query: 317 NPSS 306
NP S
Sbjct: 485 NPVS 496
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / -1
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 489 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 310
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 309 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 130
Query: 673 AG 678
G
Sbjct: 129 IG 124
>gb|CX650430.1|CX650430 COLD1_45_D04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_45_D04_A029 5', mRNA sequence
Length = 787
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / +2
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 407 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 586
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 587 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 766
Query: 317 NPSS 306
NP S
Sbjct: 767 NPVS 778
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / -2
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 771 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 592
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 591 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 412
Query: 673 AG 678
G
Sbjct: 411 IG 406
>gb|CX652498.1|CX652498 COLD1_59_B02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_59_B02_A029 5', mRNA sequence
Length = 824
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / +3
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 345 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 524
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 525 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 704
Query: 317 NPSS 306
NP S
Sbjct: 705 NPVS 716
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / -2
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 709 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 530
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 529 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 350
Query: 673 AG 678
G
Sbjct: 349 IG 344
>gb|DR057460.1|DR057460 RTNIT1_6_A05.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_6_A05_A029 3', mRNA sequence
Length = 860
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / +2
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 107 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 286
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 287 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 466
Query: 317 NPSS 306
NP S
Sbjct: 467 NPVS 478
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / -3
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 471 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 292
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 291 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVKNPIVALFDTMSGLVSKSSFSASP 112
Query: 673 AG 678
G
Sbjct: 111 IG 106
>gb|DR095347.1|DR095347 STRR1_20_A09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_20_A09_A033 5', mRNA sequence
Length = 870
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / -1
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 744 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 565
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 564 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 385
Query: 317 NPSS 306
NP S
Sbjct: 384 NPVS 373
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / +2
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 380 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 559
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 560 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 739
Query: 673 AG 678
G
Sbjct: 740 IG 745
>gb|DR100186.1|DR100186 STRR1_62_G03.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_62_G03_A033 3', mRNA sequence
Length = 804
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / -2
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 515 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 336
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 335 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 156
Query: 317 NPSS 306
NP S
Sbjct: 155 NPVS 144
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / +1
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 151 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 330
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 331 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 510
Query: 673 AG 678
G
Sbjct: 511 IG 516
>gb|DR163950.1|DR163950 RTFE1_46_A01.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_46_A01_A029 3', mRNA sequence
Length = 816
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / +2
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 26 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 205
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 206 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 385
Query: 317 NPSS 306
NP S
Sbjct: 386 NPVS 397
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / -1
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 390 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 211
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 210 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 31
Query: 673 AG 678
G
Sbjct: 30 IG 25
>gb|DR164031.1|DR164031 RTFE1_46_A01.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_46_A01_A029 5', mRNA sequence
Length = 781
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / +1
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 322 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 501
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 502 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 681
Query: 317 NPSS 306
NP S
Sbjct: 682 NPVS 693
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / -3
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 686 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 507
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 506 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 327
Query: 673 AG 678
G
Sbjct: 326 IG 321
>gb|DR178480.1|DR178480 RTMNUT1_12_C09.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_12_C09_A029 3', mRNA sequence
Length = 817
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / +2
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 149 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 328
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 329 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 508
Query: 317 NPSS 306
NP S
Sbjct: 509 NPVS 520
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / -2
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 513 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 334
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 333 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 154
Query: 673 AG 678
G
Sbjct: 153 IG 148
>gb|DR181719.1|DR181719 RTMNUT1_40_C12.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_40_C12_A029 5', mRNA sequence
Length = 794
Score = 206 bits (444), Expect = 1e-052
Identities = 79/124 (63%), Positives = 91/124 (73%)
Frame = -2 / -3
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 750 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 571
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 570 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 391
Query: 317 NPSS 306
NP S
Sbjct: 390 NPVS 379
Score = 135 bits (290), Expect = 3e-031
Identities = 64/122 (52%), Positives = 71/122 (58%)
Frame = +1 / +2
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 386 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 565
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 566 LYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 745
Query: 673 AG 678
G
Sbjct: 746 IG 751
>gb|DR162430.1|DR162430 RTFE1_17_F05.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_17_F05_A029 5', mRNA sequence
Length = 722
Score = 203 bits (438), Expect = 1e-051
Identities = 78/124 (62%), Positives = 90/124 (72%)
Frame = -2 / -2
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKND S
Sbjct: 637 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDIES 458
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P
Sbjct: 457 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPL 278
Query: 317 NPSS 306
NP S
Sbjct: 277 NPVS 266
Score = 134 bits (287), Expect = 7e-031
Identities = 63/122 (51%), Positives = 71/122 (58%)
Frame = +1 / +3
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 273 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 452
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
S+SFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 453 LYDSMSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 632
Query: 673 AG 678
G
Sbjct: 633 IG 638
>gb|DR072761.1|DR072761 RTDK1_28_A01.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_28_A01_A029 5', mRNA sequence
Length = 544
Score = 200 bits (432), Expect = 6e-051
Identities = 77/122 (63%), Positives = 89/122 (72%)
Frame = -2 / -3
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVG WKPTKNDT S R
Sbjct: 512 GEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGKWKPTKNDTESYR 333
Query: 491 LPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNP 312
LPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P NP
Sbjct: 332 LPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPLNP 153
Query: 311 SS 306
S
Sbjct: 152 VS 147
Score = 131 bits (280), Expect = 6e-030
Identities = 62/120 (51%), Positives = 69/120 (57%)
Frame = +1 / +1
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 154 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 333
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGF LPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 334 LYDSVSFLVGFHLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 513
>gb|BF609092.1|BF609092 NXSI_040_C10_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_040_C10 5' similar to Arabidopsis thaliana
sequence At1g05850 putative endochitinase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 526
Score = 197 bits (424), Expect = 8e-050
Identities = 76/124 (61%), Positives = 87/124 (70%)
Frame = -2 / +2
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 107 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 286
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPF 318
PGF +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC Q P
Sbjct: 287 YXXPGFXXVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGXQVPL 466
Query: 317 NPSS 306
NP S
Sbjct: 467 NPVS 478
Score = 133 bits (286), Expect = 9e-031
Identities = 63/122 (51%), Positives = 70/122 (57%)
Frame = +1 / -2
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M PG
Sbjct: 471 GLRGTCXPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTXXKPGX 292
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPP 672
SVSFLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P
Sbjct: 291 XYDSVSFLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASP 112
Query: 673 AG 678
G
Sbjct: 111 IG 106
>gb|DR182074.1|DR182074 RTMNUT1_42_F03.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_42_F03_A029 5', mRNA sequence
Length = 809
Score = 188 bits (406), Expect = 3e-047
Identities = 73/113 (64%), Positives = 84/113 (74%)
Frame = -2 / -3
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 618 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 439
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRD 339
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN D
Sbjct: 438 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLD 280
Score = 126 bits (270), Expect = 1e-028
Identities = 60/116 (51%), Positives = 68/116 (58%)
Frame = +1 / +2
Query: 331 SAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVS 510
+ QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG SVS
Sbjct: 272 AGQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGSLYDSVS 451
Query: 511 FLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPAG 678
FLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P G
Sbjct: 452 FLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASPIG 619
>gb|DR182229.1|DR182229 RTMNUT1_43_E03.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_43_E03_A029 5', mRNA sequence
Length = 812
Score = 188 bits (406), Expect = 3e-047
Identities = 73/113 (64%), Positives = 84/113 (74%)
Frame = -2 / -2
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 619 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 440
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRD 339
RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN D
Sbjct: 439 YRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLD 281
Score = 126 bits (270), Expect = 1e-028
Identities = 60/116 (51%), Positives = 68/116 (58%)
Frame = +1 / +3
Query: 331 SAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVS 510
+ QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG SVS
Sbjct: 273 AGQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGSLYDSVS 452
Query: 511 FLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPAG 678
FLVGFQLPT S A+G L+G IH HIA N VA SG S+S+ P G
Sbjct: 453 FLVGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASPIG 620
>gb|CO196758.1|CO196758 GEO1_1_H07.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_1_H07_A029 3', mRNA sequence
Length = 741
Score = 109 bits (233), Expect(2) = 3e-046
Identities = 44/70 (62%), Positives = 51/70 (72%)
Frame = -2 / +3
Query: 515 KNDTLSKRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDC 336
K DT S RLPGFG +N+L G CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC
Sbjct: 162 KXDTESYRLPGFGMVINVLNGGLECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDC 341
Query: 335 AEQAPFNPSS 306
+Q P NP S
Sbjct: 342 GQQVPLNPVS 371
Score = 95.9 bits (203), Expect(2) = 3e-046
Identities = 34/53 (64%), Positives = 39/53 (73%)
Frame = -2 / +2
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTK 513
G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTK
Sbjct: 5 GEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTK 163
>gb|CX712668.1|CX712668 RTPQ1_4_A07.b2_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_4_A07_A032 3', mRNA sequence
Length = 744
Score = 184 bits (397), Expect = 4e-046
Identities = 71/108 (65%), Positives = 81/108 (75%)
Frame = -2 / +3
Query: 629 LEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYGE 450
+ NAT+ F+ AMWRWM PIK QPSA D FVGNWKPTKNDT S RLPGFG +N+L G
Sbjct: 3 VSNNATIGFLTAMWRWMNPIKPKQPSAXDVFVGNWKPTKNDTESYRLPGFGMVINVLNGG 182
Query: 449 SICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
CGKG +DAMN ISHY Y+LDL+GVGRE +GDN DC +Q P NP S
Sbjct: 183 LECGKGDIDAMNNRISHYLYFLDLLGVGREQAGDNLDCGQQVPLNPVS 326
Score = 126 bits (269), Expect = 2e-028
Identities = 58/102 (56%), Positives = 63/102 (61%)
Frame = +1 / -3
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 319 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 140
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVA 618
SVSFLVGFQLPT S A+G L+G IH HIA N VA
Sbjct: 139 LYDSVSFLVGFQLPTNTSXAEGCFGLMGFIHLHIAVRNPIVA 14
>gb|AW290638.1|AW290638 NXNV044D05F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV044D05 5', mRNA sequence
Length = 458
Score = 180 bits (388), Expect = 8e-045
Identities = 70/114 (61%), Positives = 80/114 (70%)
Frame = -2 / +3
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 117 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 296
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDC 336
RLPGF +N+L G CGKG +DAMN ISH Y+LDL+GV R GDN DC
Sbjct: 297 YRLPGFXXVINVLNGGXECGKGDIDAMNNRISHXLYFLDLLGVXRXXXGDNLDC 458
Score = 109 bits (233), Expect = 2e-023
Identities = 55/114 (48%), Positives = 62/114 (54%)
Frame = +1 / -2
Query: 337 QSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFL 516
QSRLSP R TP +SR Y CEI+ F+AS P P P M PG SVSFL
Sbjct: 457 QSRLSPXXXRXTPSKSRKYXXCEILLFIASISPFPHSXPPFRTLMTXXKPGSLYDSVSFL 278
Query: 517 VGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPAG 678
VGFQLPT S A+G L+G IH HIA N VA SG S+S+ P G
Sbjct: 277 VGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASPIG 116
>gb|CD027299.1|CD027299 NXNV044D05 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV044D05 5' similar to Arabidopsis thaliana sequence
At1g05850 putative endochitinase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 458
Score = 180 bits (388), Expect = 8e-045
Identities = 70/114 (61%), Positives = 80/114 (70%)
Frame = -2 / +3
Query: 677 PAGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
P G +K DLL P+ + NAT+ F+ AMWRWM PIK QPSAHD FVGNWKPTKNDT S
Sbjct: 117 PIGEALKLDLLTSPDMVSNNATIGFLTAMWRWMNPIKPKQPSAHDVFVGNWKPTKNDTES 296
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDC 336
RLPGF +N+L G CGKG +DAMN ISH Y+LDL+GV R GDN DC
Sbjct: 297 YRLPGFXXVINVLNGGXECGKGDIDAMNNRISHXLYFLDLLGVXRXXXGDNLDC 458
Score = 109 bits (233), Expect = 2e-023
Identities = 55/114 (48%), Positives = 62/114 (54%)
Frame = +1 / -2
Query: 337 QSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFL 516
QSRLSP R TP +SR Y CEI+ F+AS P P P M PG SVSFL
Sbjct: 457 QSRLSPXXXRXTPSKSRKYXXCEILLFIASISPFPHSXPPFRTLMTXXKPGSLYDSVSFL 278
Query: 517 VGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPAG 678
VGFQLPT S A+G L+G IH HIA N VA SG S+S+ P G
Sbjct: 277 VGFQLPTNTS*AEGCFGLMGFIHLHIAVRNPIVALFDTMSGLVSKSSFSASPIG 116
>gb|CX712195.1|CX712195 RTPQ1_1_A07.b2_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_1_A07_A032 3', mRNA sequence
Length = 686
Score = 173 bits (372), Expect = 1e-042
Identities = 67/97 (69%), Positives = 74/97 (76%)
Frame = -2 / +3
Query: 596 AMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYGESICGKGYVDAM 417
AMWRWM PIK QPSA D FVGNWKPTKNDT S RLPGFG +N+L G CGKG +DAM
Sbjct: 3 AMWRWMNPIKPKQPSARDVFVGNWKPTKNDTESYRLPGFGMVINVLNGGLECGKGDIDAM 182
Query: 416 NVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
N ISHY Y+LDL+GVGRE +GDN DC +Q P NP S
Sbjct: 183 NNRISHYLYFLDLLGVGREQAGDNLDCGQQVPLNPVS 293
Score = 121 bits (258), Expect = 7e-027
Identities = 55/95 (57%), Positives = 60/95 (63%)
Frame = +1 / -2
Query: 313 GLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGR 492
GL G C QSRLSP CSRPTP +SR Y *CEI+ F+AS P P P M P PG
Sbjct: 286 GLRGTCWPQSRLSPACSRPTPSKSRKYR*CEILLFIASISPFPHSKPPFRTLMTIPKPGS 107
Query: 493 RLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIA 597
SVSFLVGFQLPT S A+G L+G IH HIA
Sbjct: 106 LYDSVSFLVGFQLPTNTSRAEGCFGLMGFIHLHIA 2
>gb|BX784236.1|BX784236 BX784236 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 131B07 similar to ENDOCHITINASE (EC
3.2.1.14), mRNA sequence
Length = 650
Score = 129 bits (277), Expect(2) = 7e-041
Identities = 52/83 (62%), Positives = 58/83 (69%)
Frame = -2 / +1
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL EYL NATLAF AA+WRWMTP+K QPSAH VG W PTKNDT + R
Sbjct: 262 GQALKVDLLHHAEYLSDNATLAFAAAIWRWMTPMKVKQPSAHQVMVGKWVPTKNDTEALR 441
Query: 491 LPGFGATMNILYGESICGKGYVD 423
LPGFG T+NIL E+ CG G D
Sbjct: 442 LPGFGMTINILKAEAECGTGSYD 510
Score = 57.9 bits (120), Expect(2) = 7e-041
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = -2 / +1
Query: 431 YVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
Y MN I+HY +LD M VGRE++GDN DC+EQ NPSS
Sbjct: 505 YDKQMNTRIAHYLDFLDHMDVGRENAGDNVDCSEQKVLNPSS 630
>gb|DR165586.1|DR165586 RTPHOS1_6_C02.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_6_C02_A029 3', mRNA sequence
Length = 946
Score = 125 bits (268), Expect(2) = 2e-039
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -2 / -3
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL EYL +NATLAF AA+WRWMTP+K QPSAH VG W PTKNDT + R
Sbjct: 506 GQALKVDLLHHAEYLSENATLAFAAAIWRWMTPMKVKQPSAHQVMVGKWVPTKNDTEALR 327
Query: 491 LPGFGATMNILYGESICG 438
LPGFG T+NIL ++ CG
Sbjct: 326 LPGFGMTINILKADAECG 273
Score = 57.0 bits (118), Expect(2) = 2e-039
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -2 / -3
Query: 419 MNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
MN I+HY +LD M VGRE++GDN DC+EQ NPSS
Sbjct: 251 MNTRIAHYLDFLDHMDVGRENAGDNVDCSEQKVLNPSS 138
>gb|DR165662.1|DR165662 RTPHOS1_6_C02.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_6_C02_A029 5', mRNA sequence
Length = 868
Score = 125 bits (268), Expect(2) = 2e-039
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -2 / -3
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL EYL +NATLAF AA+WRWMTP+K QPSAH VG W PTKNDT + R
Sbjct: 602 GQALKVDLLHHAEYLSENATLAFAAAIWRWMTPMKVKQPSAHQVMVGKWVPTKNDTEALR 423
Query: 491 LPGFGATMNILYGESICG 438
LPGFG T+NIL ++ CG
Sbjct: 422 LPGFGMTINILKADAECG 369
Score = 57.0 bits (118), Expect(2) = 2e-039
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -2 / -3
Query: 419 MNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
MN I+HY +LD M VGRE++GDN DC+EQ NPSS
Sbjct: 347 MNTRIAHYLDFLDHMDVGRENAGDNVDCSEQKVLNPSS 234
>gb|DR070571.1|DR070571 RTDK1_14_E02.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_14_E02_A029 3', mRNA sequence
Length = 833
Score = 125 bits (268), Expect(2) = 2e-039
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -2 / +2
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL EYL +NATLAF AA+WRWMTP+K QPSAH VG W PTKNDT + R
Sbjct: 146 GQALKVDLLHHAEYLSENATLAFAAAIWRWMTPMKVKQPSAHQVMVGKWVPTKNDTEALR 325
Query: 491 LPGFGATMNILYGESICG 438
LPGFG T+NIL ++ CG
Sbjct: 326 LPGFGMTINILKADAECG 379
Score = 57.0 bits (118), Expect(2) = 2e-039
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -2 / +2
Query: 419 MNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
MN I+HY +LD M VGRE++GDN DC+EQ NPSS
Sbjct: 401 MNTRIAHYLDFLDHMDVGRENAGDNVDCSEQKVLNPSS 514
>gb|DR090231.1|DR090231 RTAL1_13_D02.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_13_D02_A029 5', mRNA sequence
Length = 814
Score = 125 bits (268), Expect(2) = 2e-039
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -2 / -2
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL EYL +NATLAF AA+WRWMTP+K QPSAH VG W PTKNDT + R
Sbjct: 642 GQALKVDLLHHAEYLSENATLAFAAAIWRWMTPMKVKQPSAHQVMVGKWVPTKNDTEALR 463
Query: 491 LPGFGATMNILYGESICG 438
LPGFG T+NIL ++ CG
Sbjct: 462 LPGFGMTINILKADAECG 409
Score = 57.0 bits (118), Expect(2) = 2e-039
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -2 / -2
Query: 419 MNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
MN I+HY +LD M VGRE++GDN DC+EQ NPSS
Sbjct: 387 MNTRIAHYLDFLDHMDVGRENAGDNVDCSEQKVLNPSS 274
>gb|DR010735.1|DR010735 HEAT1_1_B04.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_1_B04_A029 3', mRNA sequence
Length = 758
Score = 125 bits (268), Expect(2) = 2e-039
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -2 / +2
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL EYL +NATLAF AA+WRWMTP+K QPSAH VG W PTKNDT + R
Sbjct: 71 GQALKVDLLHHAEYLSENATLAFAAAIWRWMTPMKVKQPSAHQVMVGKWVPTKNDTEALR 250
Query: 491 LPGFGATMNILYGESICG 438
LPGFG T+NIL ++ CG
Sbjct: 251 LPGFGMTINILKADAECG 304
Score = 57.0 bits (118), Expect(2) = 2e-039
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -2 / +2
Query: 419 MNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
MN I+HY +LD M VGRE++GDN DC+EQ NPSS
Sbjct: 326 MNTRIAHYLDFLDHMDVGRENAGDNVDCSEQKVLNPSS 439
>gb|CF401921.1|CF401921 RTWW1_15_A10.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_15_A10_A015 5', mRNA sequence
Length = 724
Score = 125 bits (268), Expect(2) = 2e-039
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -2 / -2
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL EYL +NATLAF AA+WRWMTP+K QPSAH VG W PTKNDT + R
Sbjct: 660 GQALKVDLLHHAEYLSENATLAFAAAIWRWMTPMKVKQPSAHQVMVGKWVPTKNDTEALR 481
Query: 491 LPGFGATMNILYGESICG 438
LPGFG T+NIL ++ CG
Sbjct: 480 LPGFGMTINILKADAECG 427
Score = 57.0 bits (118), Expect(2) = 2e-039
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -2 / -2
Query: 419 MNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
MN I+HY +LD M VGRE++GDN DC+EQ NPSS
Sbjct: 405 MNTRIAHYLDFLDHMDVGRENAGDNVDCSEQKVLNPSS 292
>gb|CF401985.1|CF401985 RTWW1_16_H07.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_16_H07_A015 5', mRNA sequence
Length = 717
Score = 125 bits (268), Expect(2) = 2e-039
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -2 / +1
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL EYL +NATLAF AA+WRWMTP+K QPSAH VG W PTKNDT + R
Sbjct: 289 GQALKVDLLHHAEYLSENATLAFAAAIWRWMTPMKVKQPSAHQVMVGKWVPTKNDTEALR 468
Query: 491 LPGFGATMNILYGESICG 438
LPGFG T+NIL ++ CG
Sbjct: 469 LPGFGMTINILKADAECG 522
Score = 57.0 bits (118), Expect(2) = 2e-039
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -2 / +1
Query: 419 MNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
MN I+HY +LD M VGRE++GDN DC+EQ NPSS
Sbjct: 544 MNTRIAHYLDFLDHMDVGRENAGDNVDCSEQKVLNPSS 657
>gb|DR080380.1|DR080380 RTFEPL1_22_F07.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_22_F07_A029 3', mRNA sequence
Length = 709
Score = 125 bits (268), Expect(2) = 2e-039
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -2 / +2
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL EYL +NATLAF AA+WRWMTP+K QPSAH VG W PTKNDT + R
Sbjct: 65 GQALKVDLLHHAEYLSENATLAFAAAIWRWMTPMKVKQPSAHQVMVGKWVPTKNDTEALR 244
Query: 491 LPGFGATMNILYGESICG 438
LPGFG T+NIL ++ CG
Sbjct: 245 LPGFGMTINILKADAECG 298
Score = 57.0 bits (118), Expect(2) = 2e-039
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -2 / +2
Query: 419 MNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
MN I+HY +LD M VGRE++GDN DC+EQ NPSS
Sbjct: 320 MNTRIAHYLDFLDHMDVGRENAGDNVDCSEQKVLNPSS 433
>gb|CV036542.1|CV036542 RTNACL1_60_A12.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_60_A12_A029 3', mRNA sequence
Length = 696
Score = 125 bits (268), Expect(2) = 2e-039
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -2 / +3
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL EYL +NATLAF AA+WRWMTP+K QPSAH VG W PTKNDT + R
Sbjct: 45 GQALKVDLLHHAEYLSENATLAFAAAIWRWMTPMKVKQPSAHQVMVGKWVPTKNDTEALR 224
Query: 491 LPGFGATMNILYGESICG 438
LPGFG T+NIL ++ CG
Sbjct: 225 LPGFGMTINILKADAECG 278
Score = 57.0 bits (118), Expect(2) = 2e-039
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -2 / +3
Query: 419 MNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
MN I+HY +LD M VGRE++GDN DC+EQ NPSS
Sbjct: 300 MNTRIAHYLDFLDHMDVGRENAGDNVDCSEQKVLNPSS 413
>gb|DR744763.1|DR744763 RTCU1_24_F02.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_24_F02_A029 5', mRNA sequence
Length = 696
Score = 125 bits (268), Expect(2) = 2e-039
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -2 / +3
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL EYL +NATLAF AA+WRWMTP+K QPSAH VG W PTKNDT + R
Sbjct: 78 GQALKVDLLHHAEYLSENATLAFAAAIWRWMTPMKVKQPSAHQVMVGKWVPTKNDTEALR 257
Query: 491 LPGFGATMNILYGESICG 438
LPGFG T+NIL ++ CG
Sbjct: 258 LPGFGMTINILKADAECG 311
Score = 57.0 bits (118), Expect(2) = 2e-039
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -2 / +3
Query: 419 MNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
MN I+HY +LD M VGRE++GDN DC+EQ NPSS
Sbjct: 333 MNTRIAHYLDFLDHMDVGRENAGDNVDCSEQKVLNPSS 446
>gb|DR744692.1|DR744692 RTCU1_24_F02.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_24_F02_A029 3', mRNA sequence
Length = 687
Score = 125 bits (268), Expect(2) = 2e-039
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -2 / +3
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL EYL +NATLAF AA+WRWMTP+K QPSAH VG W PTKNDT + R
Sbjct: 3 GQALKVDLLHHAEYLSENATLAFAAAIWRWMTPMKVKQPSAHQVMVGKWVPTKNDTEALR 182
Query: 491 LPGFGATMNILYGESICG 438
LPGFG T+NIL ++ CG
Sbjct: 183 LPGFGMTINILKADAECG 236
Score = 57.0 bits (118), Expect(2) = 2e-039
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -2 / +3
Query: 419 MNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
MN I+HY +LD M VGRE++GDN DC+EQ NPSS
Sbjct: 258 MNTRIAHYLDFLDHMDVGRENAGDNVDCSEQKVLNPSS 371
>gb|BQ702965.1|BQ702965 NXSI_134_G06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_134_G06 5' similar to Arabidopsis thaliana
sequence At3g16920 basic chitinase, putative see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 604
Score = 125 bits (268), Expect(2) = 2e-039
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -2 / +2
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL EYL +NATLAF AA+WRWMTP+K QPSAH VG W PTKNDT + R
Sbjct: 17 GQALKVDLLHHAEYLSENATLAFAAAIWRWMTPMKVKQPSAHQVMVGKWVPTKNDTEALR 196
Query: 491 LPGFGATMNILYGESICG 438
LPGFG T+NIL ++ CG
Sbjct: 197 LPGFGMTINILKADAECG 250
Score = 57.0 bits (118), Expect(2) = 2e-039
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -2 / +2
Query: 419 MNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
MN I+HY +LD M VGRE++GDN DC+EQ NPSS
Sbjct: 272 MNTRIAHYLDFLDHMDVGRENAGDNVDCSEQKVLNPSS 385
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 338,610,355
Number of Sequences: 355925
Number of extensions: 4472947
Number of successful extensions: 45737
Number of sequences better than 1.0e-020: 130
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 9381670230
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)