TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3148257.2.1
         (675 letters)

Database: Pinus_nucl_with_EST.fasta 
           355,925 sequences; 217,277,237 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|DR117496.1|DR117496  RTMG1_7_G10.b1_A029 Roots minus magn...   175   6e-047
gb|DR117586.1|DR117586  RTMG1_7_G10.g1_A029 Roots minus magn...   175   6e-047
gb|AW011545.1|AW011545  ST22A12 Pine TriplEx shoot tip libra...   171   3e-042
gb|AI812992.1|AI812992  2E10 Pine Lambda Zap Xylem library P...   126   1e-028
gb|CO167598.1|CO167598  FLD1_70_A08.b1_A029 Root flooded Pin...   126   2e-028
gb|CO167675.1|CO167675  FLD1_70_A08.g1_A029 Root flooded Pin...   126   2e-028
gb|CF397463.1|CF397463  RTDS3_3_G03.g1_A022 Drought-stressed...   122   2e-027
gb|DR020869.1|DR020869  STRS1_39_G06.g1_A034 Shoot tip pitch...   122   2e-027
gb|DR060520.1|DR060520  RTNIT1_28_H03.b1_A029 Roots minus ni...   122   2e-027
gb|BX678794.1|BX678794  BX678794 RS Pinus pinaster cDNA clon...   122   2e-027
gb|DR071603.1|DR071603  RTDK1_21_A05.b1_A029 Roots, dark Pin...   122   3e-027
gb|DR386081.1|DR386081  RTHG1_12_G05.g1_A029 Roots plus adde...   122   3e-027
gb|CF394902.1|CF394902  RTDS2_8_B01.b1_A021 Drought-stressed...   120   1e-026
gb|CO158939.1|CO158939  FLD1_10_F07.b1_A029 Root flooded Pin...   117   8e-026
gb|BX678600.1|BX678600  BX678600 RS Pinus pinaster cDNA clon...   116   2e-025
gb|DR386010.1|DR386010  RTHG1_12_G05.b1_A029 Roots plus adde...   113   1e-024
gb|DR048150.1|DR048150  RTBOR1_6_H10.g2_A029 Roots plus adde...   111   4e-024
gb|BF221028.1|BF221028  NXCI_162_C02_F NXCI (Nsf Xylem Compr...   111   5e-024
gb|DR060360.1|DR060360  RTNIT1_27_G11.b1_A029 Roots minus ni...   105   2e-022
>gb|DR117496.1|DR117496 RTMG1_7_G10.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
           RTMG1_7_G10_A029 3', mRNA sequence
          Length = 872

 Score =  175 bits (376), Expect(2) = 6e-047
 Identities = 67/99 (67%), Positives = 85/99 (85%)
 Frame = +3 / +2

                                                                       
Query: 117 TEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAP 296
           T  + ID+ TS+LA +PTGWGLISIAQV+RP ++ T+VW+ +++VARLYE++ G+ IM P
Sbjct: 320 TNLKFIDLITSVLALMPTGWGLISIAQVLRPLLQPTMVWEIVVAVARLYEMIFGIIIMIP 499

                                                  
Query: 297 VALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRTN 413
           VALLSWLPGFQ +QTR+LFNE FSRGLQISRIL GK+TN
Sbjct: 500 VALLSWLPGFQTLQTRILFNEAFSRGLQISRILVGKKTN 616

 Score =  109 bits (233), Expect = 2e-023
 Identities = 53/96 (55%), Positives = 63/96 (65%)
 Frame = -3 / -3

                                                                       
Query: 418 TVFVLFPVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEII 239
           ++ V  P RIR+I  PLLK SLKS  VC  * PGN +S ATG ++  P+ ISY RAT   
Sbjct: 621 SILVFLPTRIREI*SPLLKASLKSIRVCNV*KPGNHESKATGIMIIMPNIISYNRATATT 442

                                               
Query: 238 LSQTTVDSMNGRIT*AIEIKPQPVGINAKRLVKMSM 131
           +SQT V    G  T*AI+IKPQPVGINA  LV  S+
Sbjct: 441 ISQTMVGCNRGLRT*AIDIKPQPVGINASTLVIRSI 334

 Score = 32.7 bits (65), Expect(2) = 6e-047
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +3 / +2

                         
Query: 15  ARDKYAAKQHLYYR 56
           A DKYAAK+H+YYR
Sbjct: 218 AEDKYAAKRHIYYR 259
>gb|DR117586.1|DR117586 RTMG1_7_G10.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
           RTMG1_7_G10_A029 5', mRNA sequence
          Length = 763

 Score =  175 bits (376), Expect(2) = 6e-047
 Identities = 67/99 (67%), Positives = 85/99 (85%)
 Frame = +3 / +3

                                                                       
Query: 117 TEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAP 296
           T  + ID+ TS+LA +PTGWGLISIAQV+RP ++ T+VW+ +++VARLYE++ G+ IM P
Sbjct: 453 TNLKFIDLITSVLALMPTGWGLISIAQVLRPLLQPTMVWEIVVAVARLYEMIFGIIIMIP 632

                                                  
Query: 297 VALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRTN 413
           VALLSWLPGFQ +QTR+LFNE FSRGLQISRIL GK+TN
Sbjct: 633 VALLSWLPGFQTLQTRILFNEAFSRGLQISRILVGKKTN 749

 Score =  109 bits (233), Expect = 2e-023
 Identities = 53/96 (55%), Positives = 63/96 (65%)
 Frame = -3 / -1

                                                                       
Query: 418 TVFVLFPVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEII 239
           ++ V  P RIR+I  PLLK SLKS  VC  * PGN +S ATG ++  P+ ISY RAT   
Sbjct: 754 SILVFLPTRIREI*SPLLKASLKSIRVCNV*KPGNHESKATGIMIIMPNIISYNRATATT 575

                                               
Query: 238 LSQTTVDSMNGRIT*AIEIKPQPVGINAKRLVKMSM 131
           +SQT V    G  T*AI+IKPQPVGINA  LV  S+
Sbjct: 574 ISQTMVGCNRGLRT*AIDIKPQPVGINASTLVIRSI 467

 Score = 32.7 bits (65), Expect(2) = 6e-047
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +3 / +3

                         
Query: 15  ARDKYAAKQHLYYR 56
           A DKYAAK+H+YYR
Sbjct: 351 AEDKYAAKRHIYYR 392
>gb|AW011545.1|AW011545 ST22A12 Pine TriplEx shoot tip library Pinus taeda cDNA clone
           ST22A12, mRNA sequence
          Length = 578

 Score =  171 bits (369), Expect = 3e-042
 Identities = 65/122 (53%), Positives = 87/122 (71%)
 Frame = +3 / +3

                                                                       
Query: 15  ARDKYAAKQHLYYRXXXXXXXXXXXXXXXXXXKFTEFQIIDIFTSLLAFIPTGWGLISIA 194
           A DKYAAKQH+YYR                  + TE +++D+ TSLLAF+PTGWGLI IA
Sbjct: 150 AHDKYAAKQHIYYRAIQALVISCTILAILLLLQLTELKLVDLVTSLLAFVPTGWGLILIA 329

                                                                       
Query: 195 QVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEMQTRVLFNEGFSRG 374
           QV++ F+   +VW+++I+VARLYEI  G+ +M P+A+LSWLPGFQ  QTR+LFNE F +G
Sbjct: 330 QVLKSFLHYNIVWETVIAVARLYEITFGIIVMIPMAVLSWLPGFQATQTRILFNEAFXKG 509

             
Query: 375 LQ 380
           L+
Sbjct: 510 LK 515
>gb|AI812992.1|AI812992 2E10 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
          Length = 675

 Score =  126 bits (270), Expect = 1e-028
 Identities = 47/90 (52%), Positives = 66/90 (73%)
 Frame = +3 / +1

                                                                       
Query: 135 DIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSW 314
           D+F  +LAF+PTGW ++ IAQ  +PF+     W S+ ++AR YE ++G+ + APVA+L+W
Sbjct: 406 DLFACILAFMPTGWAILQIAQTCKPFVHRIGFWGSVRALARGYEFIMGLLLFAPVAVLAW 585

                                         
Query: 315 LPGFQEMQTRVLFNEGFSRGLQISRILTGK 404
            P   E QTR+LFN+ FSRGLQISRIL G+
Sbjct: 586 FPFVSEFQTRLLFNQAFSRGLQISRILAGR 675
>gb|CO167598.1|CO167598 FLD1_70_A08.b1_A029 Root flooded Pinus taeda cDNA clone
           FLD1_70_A08_A029 3', mRNA sequence
          Length = 820

 Score =  126 bits (269), Expect = 2e-028
 Identities = 48/93 (51%), Positives = 66/93 (70%)
 Frame = +3 / +3

                                                                       
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
           I D+F   LAF+PTGW  + IA   RP  E   +WDS+ ++AR YE ++G+ +  PVA+L
Sbjct: 51  IADLFVCFLAFMPTGWAFLQIALACRPLFECCGLWDSVRALARSYEYVMGLHLFTPVAIL 230

                                            
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
           +W P   E Q+R+LFN+ FSRGLQISRILTG++
Sbjct: 231 AWFPFVSEFQSRLLFNQAFSRGLQISRILTGRK 329
>gb|CO167675.1|CO167675 FLD1_70_A08.g1_A029 Root flooded Pinus taeda cDNA clone
           FLD1_70_A08_A029 5', mRNA sequence
          Length = 501

 Score =  126 bits (269), Expect = 2e-028
 Identities = 48/93 (51%), Positives = 66/93 (70%)
 Frame = +3 / +2

                                                                       
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
           I D+F   LAF+PTGW  + IA   RP  E   +WDS+ ++AR YE ++G+ +  PVA+L
Sbjct: 59  IADLFVCFLAFMPTGWAFLQIALACRPLFECCGLWDSVRALARSYEYVMGLHLFTPVAIL 238

                                            
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
           +W P   E Q+R+LFN+ FSRGLQISRILTG++
Sbjct: 239 AWFPFVSEFQSRLLFNQAFSRGLQISRILTGRK 337
>gb|CF397463.1|CF397463 RTDS3_3_G03.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
           taeda cDNA clone RTDS3_3_G03_A022 5', mRNA sequence
          Length = 773

 Score =  122 bits (262), Expect = 2e-027
 Identities = 48/93 (51%), Positives = 65/93 (69%)
 Frame = +3 / +2

                                                                       
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
           + D+F   LAF+PTGW L+ IAQ  RP    T   +S+ S+AR YE ++G+ +  PVA+L
Sbjct: 338 VADLFACFLAFMPTGWALLQIAQACRPLYNRTGFLESVRSLARGYEYIMGLLLFTPVAIL 517

                                            
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
           +W P   E QTR+LFN+ FSRGLQISRIL G++
Sbjct: 518 AWFPFVSEFQTRLLFNQAFSRGLQISRILAGRK 616
>gb|DR020869.1|DR020869 STRS1_39_G06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
           cDNA clone STRS1_39_G06_A034 5', mRNA sequence
          Length = 683

 Score =  122 bits (262), Expect = 2e-027
 Identities = 48/93 (51%), Positives = 65/93 (69%)
 Frame = +3 / -2

                                                                       
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
           + D+F   LAF+PTGW L+ IAQ  RP    T   +S+ S+AR YE ++G+ +  PVA+L
Sbjct: 571 VADLFACFLAFMPTGWALLQIAQACRPLYNRTGFLESVRSLARGYEYIMGLLLFTPVAIL 392

                                            
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
           +W P   E QTR+LFN+ FSRGLQISRIL G++
Sbjct: 391 AWFPFVSEFQTRLLFNQAFSRGLQISRILAGRK 293
>gb|DR060520.1|DR060520 RTNIT1_28_H03.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
           RTNIT1_28_H03_A029 3', mRNA sequence
          Length = 692

 Score =  122 bits (262), Expect = 2e-027
 Identities = 48/93 (51%), Positives = 65/93 (69%)
 Frame = +3 / +2

                                                                       
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
           + D+F   LAF+PTGW L+ IAQ  RP    T   +S+ S+AR YE ++G+ +  PVA+L
Sbjct: 11  VADLFACFLAFMPTGWALLQIAQACRPLYNRTGFLESVRSLARGYEYIMGLLLFTPVAIL 190

                                            
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
           +W P   E QTR+LFN+ FSRGLQISRIL G++
Sbjct: 191 AWFPFVSEFQTRLLFNQAFSRGLQISRILAGRK 289
>gb|BX678794.1|BX678794 BX678794 RS Pinus pinaster cDNA clone RS15C01, mRNA sequence
          Length = 488

 Score =  122 bits (261), Expect = 2e-027
 Identities = 46/93 (49%), Positives = 64/93 (68%)
 Frame = +3 / +2

                                                                       
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
           I D+F   LAF+PTGW  + IA   RP ++    WDS+ ++AR Y+ ++G+ +  PVA+L
Sbjct: 92  ISDLFACFLAFMPTGWAFLQIALACRPLLQHAGFWDSVRALARSYDYVMGLLLFTPVAIL 271

                                            
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
           +W P   E QTR LFN+ FSRGLQISRIL G++
Sbjct: 272 AWFPFVSEFQTRFLFNQAFSRGLQISRILAGRK 370
>gb|DR071603.1|DR071603 RTDK1_21_A05.b1_A029 Roots, dark Pinus taeda cDNA clone
           RTDK1_21_A05_A029 3', mRNA sequence
          Length = 769

 Score =  122 bits (260), Expect = 3e-027
 Identities = 46/93 (49%), Positives = 64/93 (68%)
 Frame = +3 / +1

                                                                       
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
           I D+F   LAF+PTGW  + IA   RP ++    WDS+ ++AR Y+ ++G+ +  PVA+L
Sbjct: 121 ISDLFACFLAFMPTGWAFLQIALACRPLLQRAGFWDSVRALARSYDYVMGLVLFTPVAIL 300

                                            
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
           +W P   E QTR LFN+ FSRGLQISRIL G++
Sbjct: 301 AWFPFVSEFQTRFLFNQAFSRGLQISRILAGRK 399
>gb|DR386081.1|DR386081 RTHG1_12_G05.g1_A029 Roots plus added mercury Pinus taeda cDNA
           clone RTHG1_12_G05_A029 5', mRNA sequence
          Length = 804

 Score =  122 bits (260), Expect = 3e-027
 Identities = 46/93 (49%), Positives = 64/93 (68%)
 Frame = +3 / +1

                                                                       
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
           I D+F   LAF+PTGW  + IA   RP ++    WDS+ ++AR Y+ ++G+ +  PVA+L
Sbjct: 118 ISDLFACFLAFMPTGWAFLQIALACRPLLQRAGFWDSVRALARSYDYVMGLVLFTPVAIL 297

                                            
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
           +W P   E QTR LFN+ FSRGLQISRIL G++
Sbjct: 298 AWFPFVSEFQTRFLFNQAFSRGLQISRILAGRK 396
>gb|CF394902.1|CF394902 RTDS2_8_B01.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
           taeda cDNA clone RTDS2_8_B01_A021 3', mRNA sequence
          Length = 559

 Score =  120 bits (256), Expect = 1e-026
 Identities = 46/94 (48%), Positives = 66/94 (70%)
 Frame = +3 / +3

                                                                       
Query: 135 DIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSW 314
           D+F S+LAFIPTGWG++ +A   +P ++   +W SI S+ RLY+  +G+ +  PVAL SW
Sbjct: 6   DVFASILAFIPTGWGILCLAIAWKPIVKRLGLWKSIRSLGRLYDAGMGMIVFIPVALCSW 185

                                             
Query: 315 LPGFQEMQTRVLFNEGFSRGLQISRILTGKRTNT 416
           LP     QTR++FN+ FSRGL+IS IL G + N+
Sbjct: 186 LPFVSTFQTRLMFNQAFSRGLEISLILAGNKPNS 287
>gb|CO158939.1|CO158939 FLD1_10_F07.b1_A029 Root flooded Pinus taeda cDNA clone
           FLD1_10_F07_A029 3', mRNA sequence
          Length = 760

 Score =  117 bits (250), Expect = 8e-026
 Identities = 44/89 (49%), Positives = 61/89 (68%)
 Frame = +3 / +1

                                                                       
Query: 141 FTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSWLP 320
           F   LAF+PTGW  + IA   RP ++    WDS+ ++AR Y+ ++G+ +  PVA+L+W P
Sbjct: 1   FACFLAFMPTGWAFLQIALACRPLLQRAGFWDSVRALARSYDYVMGLVLFTPVAILAWFP 180

                                        
Query: 321 GFQEMQTRVLFNEGFSRGLQISRILTGKR 407
              E QTR LFN+ FSRGLQISRIL G++
Sbjct: 181 FVSEFQTRFLFNQAFSRGLQISRILAGRK 267
>gb|BX678600.1|BX678600 BX678600 RS Pinus pinaster cDNA clone RS11G06, mRNA sequence
          Length = 551

 Score =  116 bits (248), Expect = 2e-025
 Identities = 44/93 (47%), Positives = 62/93 (66%)
 Frame = +3 / +3

                                                                       
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
           I D+F   LAF+PTGW  + IA   RP ++    WDS+ ++AR Y+ ++G+ +  PVA+L
Sbjct: 84  ISDLFACFLAFMPTGWAFLQIALACRPLLQHAGFWDSVRALARSYDYVMGLLLFTPVAIL 263

                                            
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
           +W P   E QTR LFN+ FSRGL  SRIL G++
Sbjct: 264 AWFPFVSEFQTRFLFNQAFSRGLXNSRILAGRK 362
>gb|DR386010.1|DR386010 RTHG1_12_G05.b1_A029 Roots plus added mercury Pinus taeda cDNA
           clone RTHG1_12_G05_A029 3', mRNA sequence
          Length = 806

 Score =  113 bits (241), Expect = 1e-024
 Identities = 42/84 (50%), Positives = 59/84 (70%)
 Frame = +3 / +1

                                                                       
Query: 156 AFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEM 335
           AF+PTGW  + IA   RP ++    WDS+ ++AR Y+ ++G+ +  PVA+L+W P   E 
Sbjct: 1   AFMPTGWAFLQIALACRPLLQRAGFWDSVRALARSYDYVMGLVLFTPVAILAWFPFVSEF 180

                                   
Query: 336 QTRVLFNEGFSRGLQISRILTGKR 407
           QTR LFN+ FSRGLQISRIL G++
Sbjct: 181 QTRFLFNQAFSRGLQISRILAGRK 252
>gb|DR048150.1|DR048150 RTBOR1_6_H10.g2_A029 Roots plus added boron Pinus taeda cDNA clone
           RTBOR1_6_H10_A029 5', mRNA sequence
          Length = 691

 Score =  111 bits (238), Expect = 4e-024
 Identities = 41/95 (43%), Positives = 64/95 (67%)
 Frame = +3 / -2

                                                                       
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
           + D+F S+LAF+PTGW +I +A   +  ++S  +W S+ ++AR Y+  +G+ +  P+ +L
Sbjct: 618 VTDLFASILAFVPTGWLIICLAITWKSVVKSLGLWKSVSAIARFYDAGMGILLFIPIVVL 439

                                              
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRTN 413
           SW P     QTR+LFN+ FSRGL+IS IL G + N
Sbjct: 438 SWFPFVSTFQTRLLFNQAFSRGLEISLILAGNKPN 334
>gb|BF221028.1|BF221028 NXCI_162_C02_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
           taeda cDNA clone NXCI_162_C02 5' similar to Arabidopsis
           thaliana sequence At2g31960 glucan synthase like protein
           see http://mips.gsf.de/proj/thal/db/index.html, mRNA
           sequence
          Length = 381

 Score =  111 bits (237), Expect = 5e-024
 Identities = 41/85 (48%), Positives = 60/85 (70%)
 Frame = +3 / +1

                                                                       
Query: 153 LAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQE 332
           LAF+PTGW ++ IAQ  + F+     W S+ ++AR YE ++G+ + AP+A+L+W P   E
Sbjct: 1   LAFMPTGWAILQIAQTCKSFVHRIGFWGSVRALARGYEFIMGLLLFAPIAVLAWFPFVSE 180

                                    
Query: 333 MQTRVLFNEGFSRGLQISRILTGKR 407
            QTR+LFN+ F  GLQISRIL G++
Sbjct: 181 FQTRLLFNQXFXXGLQISRILAGRK 255
>gb|DR060360.1|DR060360 RTNIT1_27_G11.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
           RTNIT1_27_G11_A029 3', mRNA sequence
          Length = 569

 Score =  105 bits (225), Expect = 2e-022
 Identities = 40/87 (45%), Positives = 59/87 (67%)
 Frame = +3 / +2

                                                                       
Query: 156 AFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEM 335
           AFIPTGWG++ +    +P ++   +W SI S+ RLY+  +G+ +  PVA+ SWLP     
Sbjct: 2   AFIPTGWGILCLGIAWKPIVKRLGLWKSIRSLGRLYDAGMGMIVFIPVAMCSWLPFVSTF 181

                                      
Query: 336 QTRVLFNEGFSRGLQISRILTGKRTNT 416
           QTR++FN+ FSRGL+IS IL G + N+
Sbjct: 182 QTRLMFNQAFSRGLEISLILAGNKPNS 262
  Database: Pinus_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:45 PM
  Number of letters in database: 217,277,237
  Number of sequences in database:  355,925
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 353,276,342
Number of Sequences: 355925
Number of extensions: 5073475
Number of successful extensions: 42656
Number of sequences better than 1.0e-020: 23
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 9273834940
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)